View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2859R-Insertion-9 (Length: 485)
Name: NF2859R-Insertion-9
Description: NF2859R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2859R-Insertion-9 |
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Alignment Details
Target: chr2 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 9 - 465
Target Start/End: Original strand, 27133457 - 27133912
Alignment:
| Q |
9 |
gtgtggtcacacaccgagccaaattttaagaatctaatgctccctggctatattctcatatatcttaattatatccaagccaagcaccgctagatctaaa |
108 |
Q |
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| T |
27133457 |
gtgtggtcacacaccgagccaaattttaagaatctaatgctccctggctatattctcatatatcttaattatatccaagccaagcaccgctagatctaaa |
27133556 |
T |
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| Q |
109 |
gagtacattctataaactcacttttgtgtgctctttatttatatttttgagccaaattgattgtggttttnnnnnnntataagttttaatggaatttcat |
208 |
Q |
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| T |
27133557 |
gagtacattctataaactcacttttgtgtgctctttatttatatttttgagccaaattgattgtggttttaaaaaa-tataagttttaatggaatttcat |
27133655 |
T |
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| Q |
209 |
ttagtatgttcatcattattttctcactattgcttctcaaatgttaaacaatcaaaacaatttagtaatgtcattgttaaaaacaattaaatttagtgtc |
308 |
Q |
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| T |
27133656 |
ttagtatgttcgtcattattgtctcactattgcttctcaaatgttaaacaatcaaaacaatttagtaatgtcattgtttaaaacaattaaatttagtgtc |
27133755 |
T |
|
| Q |
309 |
tcttaagtacaaattatatgatnnnnnnntgtgaaagatatttgacgtgagttcaaaccttctacgtttattttctccacacttattatgtggaagtttc |
408 |
Q |
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| T |
27133756 |
tcttaagaacaaattatatgataaaaaaatgtg-aagatatttgacctgagttcaaacctactacgtttattttcttcacatttaatgtgtgtaagtttc |
27133854 |
T |
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| Q |
409 |
gttaagtgaactcttc-aaaacatgaaaaatgaaatttaatgacaaaacataagtgaa |
465 |
Q |
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| T |
27133855 |
gttaagtgaactcttcaaaaacatgaaaaatgaaatttaatgacaaaacataagtgaa |
27133912 |
T |
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