View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2859_high_4 (Length: 315)
Name: NF2859_high_4
Description: NF2859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2859_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 3932768 - 3932463
Alignment:
| Q |
2 |
aatctgtaagacaaatacaaatcatgtaacaaaaataggacaaaaatattaagtcagagaattaaaataatctacattcctcttaccctaaaaggaggaa |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3932768 |
aatctgtaagacaaatacaaatcatgtaacaaaaataggacaaaaatattaagtcagagaattaaaataatctacattcctcttaccctaaaaggaggaa |
3932669 |
T |
|
| Q |
102 |
catgctcaatctcctctggttcacaatgccatggattttgaacatagctcaactcgactaacaaactactgtcaggtcggatacaatatacaatgccaat |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3932668 |
catgctcaatctcctctggttcacaatgccatggattttgaacatagctcaactcgactaacaaactactgtcaggtcggatacaatatacaatgccaat |
3932569 |
T |
|
| Q |
202 |
ggttcccggtaccacatttcctaatccatgctttgaagttgtaagggttggacgaacacgaacccaatctccaaccttgaactcctcaacccgttccatc |
301 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3932568 |
ggttcctggtaccacatttcctaatccatgctttgaagttgtaagggttggacgaacacgaacccaatctccaaccttgaactcctcaacccgttccatc |
3932469 |
T |
|
| Q |
302 |
tctgct |
307 |
Q |
| |
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|||||| |
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| T |
3932468 |
tctgct |
3932463 |
T |
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