View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2859_low_9 (Length: 268)
Name: NF2859_low_9
Description: NF2859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2859_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 7020827 - 7020586
Alignment:
| Q |
10 |
aagaatataacgtaagaaatagaaaactttaaaacagagagaaatcactacaattgtctaataaaaataagatgataatagtatgtgacaaattgtacaa |
109 |
Q |
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| T |
7020827 |
aagaatataacgtaagaaatagaaaactttaaaacggagagaaatcactacaattgtctaataaaaataagatgataatagtatgtgacaaattgtacaa |
7020728 |
T |
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| Q |
110 |
cacataaagttttgtttcatatgtgacgtgatttatcatgaaatttttgtttcagtttatattattcatcatgattttttgtttcatatatagtgctgat |
209 |
Q |
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| T |
7020727 |
cacataaagttttgtttcatatgtgacgtgatttatcatgaaatttttgtttcagtttatatgattcatcatgattttttgtttcatatatagtgctgat |
7020628 |
T |
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| Q |
210 |
tgggaggtctcatataaaaaacacaagaaggatccagttcac |
251 |
Q |
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| T |
7020627 |
tgggaggtctcatatagaagacacaagaaggatccagttcac |
7020586 |
T |
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