View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2863_high_5 (Length: 262)

Name: NF2863_high_5
Description: NF2863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2863_high_5
NF2863_high_5
[»] chr6 (14 HSPs)
chr6 (24-245)||(2929540-2929761)
chr6 (23-237)||(3003418-3003632)
chr6 (23-224)||(2964739-2964940)
chr6 (23-236)||(2983093-2983309)
chr6 (23-224)||(2927390-2927591)
chr6 (27-237)||(2937694-2937904)
chr6 (23-237)||(2974237-2974451)
chr6 (23-237)||(2997007-2997221)
chr6 (33-237)||(2658619-2658823)
chr6 (23-183)||(2952163-2952323)
chr6 (23-218)||(2934829-2935024)
chr6 (160-236)||(2985695-2985771)
chr6 (23-97)||(2978476-2978550)
chr6 (94-245)||(2979192-2979340)
[»] chr7 (1 HSPs)
chr7 (23-237)||(3339255-3339469)
[»] scaffold0024 (2 HSPs)
scaffold0024 (25-218)||(34895-35088)
scaffold0024 (93-243)||(44559-44709)
[»] chr3 (2 HSPs)
chr3 (23-232)||(49613666-49613875)
chr3 (23-216)||(49618654-49618835)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 6e-89; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 2929540 - 2929761
Alignment:
Q  24 aggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacc 123  Q
    |||||||| |||||||||||||||||||||||||||  |||||  ||||| |||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  2929540 aggttttcaggaggagttcttgaaattcctcaattaacagttgcagatgggaccgaaactttattttggaatatgattgctttggagcagtttcattacc 2929639  T
Q  124 cttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaa 223  Q
    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  2929640 ctcatgagtcatatattcttgattatgttactattatggattttcttataaatactggtaaggacgccgatatacttattcagaaagaaatactggaaaa 2929739  T
Q  224 ttggtttggagacaatcattct 245  Q
    ||||||||||||||||||||||    
T  2929740 ttggtttggagacaatcattct 2929761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 3003632 - 3003418
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||   |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  3003632 gaggttttcgggaggagttcttgaaattcctcaattattagttgcggattcgaccgaaactttatttcggaatatggttgctttggagcagtgtcattac 3003533  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    ||| |||| || ||||||   ||||||  | || || |||||| |||||||||||||| |||||| | ||| |||||| ||||||  |||||||||||||    
T  3003532 cctgatgattcatatattaccgattatcgttctgttttggattaccttataaatactgctaaggatgtggatatacttgttcagagcgaaatactggaaa 3003433  T
Q  223 attggtttggagaca 237  Q
    ||  | |||||||||    
T  3003432 atatgcttggagaca 3003418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 2964739 - 2964940
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    ||||||||||||||||||||||||||||||||||||| ||| |   ||||| ||||||  | | |||||||||||| |||||||||||||||||| ||||    
T  2964739 gaggttttcgggaggagttcttgaaattcctcaattaatagctcacgatgggaccgaaattatgtttcggaatatggttgctttggagcagtgtcgttac 2964838  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    ||||||||||| ||||||  ||| |||||| || || |||||| ||||||||||||||| ||||| | ||| |||||| |||||||  ||||||||||||    
T  2964839 ccttatgagtcatatattactgactatgttgctgttttggattaccttataaatactggcaaggatgtggatatacttgttcagaacaaaatactggaaa 2964938  T
Q  223 at 224  Q
    ||    
T  2964939 at 2964940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 236
Target Start/End: Original strand, 2983093 - 2983309
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcac---cgaatctttatttcggaatatgattgctttggagcagtgtcat 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||| | ||   ||||  ||| |||||||||||||||||||||||||| ||||||    
T  2983093 gaggttttcgggaggagttcttgaaattcctcaattaatagttcatgatcggacgaccgaaattttgtttcggaatatgattgctttggagcattgtcat 2983192  T
Q  120 tacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactgg 219  Q
    |||||| ||||||| ||||||||||||||||||  | || |||||| ||||||||||| ||||||||| | |||  |||||||||||||  ||||||| |    
T  2983193 taccctcatgagtcatatattcttgattatgttcttgttttggattaccttataaataatggtaaggatgtggatgtacttattcagaagcaaatactag 2983292  T
Q  220 aaaattggtttggagac 236  Q
    |||| | | ||||||||    
T  2983293 aaaacttgcttggagac 2983309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 2927390 - 2927591
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||||||||||||||||||||||||||  ||||  ||||   || ||| ||||||| ||||||||| |||||||||||||||||||||||    
T  2927390 gaggttttcgggaggagttcttgaaattcctcaattaaaagttcaggattcgactgaaactttattacggaatatggttgctttggagcagtgtcattac 2927489  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    ||| |||| || ||||||  |||||||  | || || |||||| ||||||||||||||||||||| | ||| |||||| ||||||  |||||||||||||    
T  2927490 cctgatgattcatatattactgattatcgttctgttttggattaccttataaatactggtaaggatgtggatatacttgttcagagggaaatactggaaa 2927589  T
Q  223 at 224  Q
    ||    
T  2927590 at 2927591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 2937694 - 2937904
Alignment:
Q  27 ttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattaccctt 126  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||||   ||||||  ||| ||| |||||||| ||||||||||||||||||||||||||     
T  2937694 ttttcaggaggagttcttgaaattcctcaattaacagttgaggattcgaccgaaattttgttttggaatatggttgctttggagcagtgtcattaccctc 2937793  T
Q  127 atgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattg 226  Q
    ||||||| ||||||  ||||||||||  | || |||||| |||||||||||| |||||||| ||||  |||||| ||  |||  ||||||||||||||||    
T  2937794 atgagtcatatattgctgattatgttgttgttttggattaccttataaataccggtaaggatgcgggtatacttgtttggaacaaaatactggaaaattg 2937893  T
Q  227 gtttggagaca 237  Q
    | |||||||||    
T  2937894 gcttggagaca 2937904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 2974237 - 2974451
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||||||||||||||||||||||||||  ||||   ||||| ||||||  ||| |||||||||||| |||||||||||||||||||||||    
T  2974237 gaggttttcgggaggagttcttgaaattcctcaattaacagttcaagatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattac 2974336  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    |||||| |||| |||||| ||||||||  |  |||| |||||| ||||||||||||| ||| ||| | ||| |||||| ||| ||   | |||||| |||    
T  2974337 ccttatcagtcatatattattgattatcattttattttggattaccttataaatactagtacggatgtggatatacttgttcggagcaatatactgcaaa 2974436  T
Q  223 attggtttggagaca 237  Q
    ||||| |||||||||    
T  2974437 attggcttggagaca 2974451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 2997221 - 2997007
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||| ||||||||||||||||   ||| | |||| |||| | |||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  2997221 gaggttttcgggagaagttcttgaaattccttcgttaattgttgaggatcggaccgaagctttatttcggaatatggttgctttggagcagtttcattac 2997122  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
     || |  |||  ||||||  |||||||||| || || |||||| ||||||||| ||||||||||| |  || |||||| |||| ||||||||||||||||    
T  2997121 actaacaagttatatattactgattatgtttctgttttggattaccttataaacactggtaaggatgttgatatacttgttcacaaagaaatactggaaa 2997022  T
Q  223 attggtttggagaca 237  Q
    ||||| |||||||||    
T  2997021 attggcttggagaca 2997007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 2658823 - 2658619
Alignment:
Q  33 ggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagt 132  Q
    |||||||||||||||||||||||||||   ||||  ||| | || |||  ||| ||||| |||||| ||||||||||||| |||||||||||||||||||    
T  2658823 ggaggagttcttgaaattcctcaattaacggttgacgataggactgaaattttgtttcgaaatatggttgctttggagcaatgtcattacccttatgagt 2658724  T
Q  133 cctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttgg 232  Q
    | ||||||  |||||||||| || || |||||| ||||||||||||||||||||| | ||| |||||| |||  ||  ||||||||||||||||| ||||    
T  2658723 catatattactgattatgttgctgttttggattaccttataaatactggtaaggatgtggatatacttgttccaaacaaaatactggaaaattggcttgg 2658624  T
Q  233 agaca 237  Q
    |||||    
T  2658623 agaca 2658619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 2952163 - 2952323
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    ||||||||||| |||||||||||||||||||||||||  ||||  ||||   |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2952163 gaggttttcggaaggagttcttgaaattcctcaattaaaagttcaggattcaaccgaaactttatttcggaatatggttgctttggagcagtgtcattac 2952262  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggta 183  Q
    ||| | ||||| ||||||  ||||||||||  | || |||||| | |||||||||||||||    
T  2952263 cctgaggagtcatatattgctgattatgttgttgttttggattacattataaatactggta 2952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 2934829 - 2935024
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||||||||||||||||||||||||||   ||||  ||| | || |||  ||  ||||| |||||| |||||||||||||||||||||||    
T  2934829 gaggttttcgggaggagttcttgaaattcctcaattaacggttgacgataggactgaaatttcgtttcgaaatatggttgctttggagcagtgtcattac 2934928  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactg 218  Q
    ||| |||| || |||||   |||||||||| || | ||||||| ||||||||||||||||| ||| || || |||||| ||| ||| |||||||||    
T  2934929 cctgatgattcatatatcactgattatgttgctgtcatggattaccttataaatactggtacggatgctgatatacttgttcggaacgaaatactg 2935024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 2985695 - 2985771
Alignment:
Q  160 tggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagac 236  Q
    |||||| ||||||||||||| ||||||| ||||| |||||| |||||||  |||||||||||||||||||| |||||    
T  2985695 tggattaccttataaatactagtaaggatgcggatatacttgttcagaaccaaatactggaaaattggtttcgagac 2985771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 2978476 - 2978550
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatat 97  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||  ||| |||||| ||||    
T  2978476 gaggttttcgggaggagttcttgaaattcctcaattaagagttgaggatgggaccgaaattttgtttcggtatat 2978550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 2979192 - 2979340
Alignment:
Q  94 atatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcgga 193  Q
    ||||| ||||||||||||||||| |||||||| ||||||| ||||||  |||||||||   | |  | |||| |||||||||||| |||| ||| | |||    
T  2979192 atatggttgctttggagcagtgttattaccctcatgagtcatatattactgattatgt---tgtcttcgattaccttataaataccggtacggatgtgga 2979288  T
Q  194 catacttattcagaaagaaatactggaaaattggtttggagacaatcattct 245  Q
     |||||| ||| ||   ||||||||||||||| | ||||||||| |||||||    
T  2979289 tatacttgttcggagcaaaatactggaaaatttgcttggagacagtcattct 2979340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 3339255 - 3339469
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    |||||||||||||||||||||||||||||||||||||  |||||  ||||| ||||||  ||| |||||||||||| |||||||||||||||||||||||    
T  3339255 gaggttttcgggaggagttcttgaaattcctcaattaacagttgacgatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattac 3339354  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    ||| ||||||| |||||| ||||||||||| || || |||||||||||||||||||| ||| ||| | ||| |||||| || |||  |||||||| ||||    
T  3339355 cctgatgagtcatatattattgattatgttgcttttttggatttccttataaatactagtatggatgtggatatacttgttaagagcgaaatactagaaa 3339454  T
Q  223 attggtttggagaca 237  Q
    ||||| ||| |||||    
T  3339455 attggcttgcagaca 3339469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 35088 - 34895
Alignment:
Q  25 ggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattaccc 124  Q
    ||||||||| |||||| ||||||||||||| ||||  ||||| |||||| ||||||  ||| |||||||||||| |||||||||||||||||||||||||    
T  35088 ggttttcggaaggagtgcttgaaattcctcgattagaagttgaggatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattaccc 34989  T
Q  125 ttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactg 218  Q
    ||||||||| ||||||  ||||||||||  | || |||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||    
T  34988 ttatgagtcatatattactgattatgttgttgttttggatttccttataaatactggtaaggatgcggatatacttgttcggaaagaaatactg 34895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 44709 - 44559
Alignment:
Q  93 aatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcgg 192  Q
    |||||| ||||| ||||| ||| |||||||||| |||| || |||||| || |||||||| ||||| |||||| ||||||||||||||||||||| || |    
T  44709 aatatggttgctatggagtagtatcattaccctaatgaatcatatattattaattatgttgctattttggattaccttataaatactggtaaggatgcag 44610  T
Q  193 acatacttattcagaaagaaatactggaaaattggtttggagacaatcatt 243  Q
    | |||| | ||| ||   ||||||||||||||| | ||||||||| |||||    
T  44609 atatacatgttcggagcaaaatactggaaaatttgcttggagacagtcatt 44559  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 232
Target Start/End: Original strand, 49613666 - 49613875
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    ||||||||| ||| | ||||||||||||||||||||   ||||| |||| | || |||  ||| |||||||||||| ||||||||||||| ||||| |||    
T  49613666 gaggttttcaggacgggttcttgaaattcctcaattgaaagttgaggattggactgaaattttgtttcggaatatggttgctttggagcaatgtcactac 49613765  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaa 222  Q
    |||  ||||||||| |||   ||||||||| || || ||||||||||||| |||||||| ||||| | ||| |||||| |||||||  |||||||||  |    
T  49613766 cctagtgagtcctacattacggattatgttgctgttttggatttccttattaatactggcaaggatgtggatatacttgttcagaagaaaatactggtga 49613865  T
Q  223 attggtttgg 232  Q
    ||||| ||||    
T  49613866 attggcttgg 49613875  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 49618654 - 49618835
Alignment:
Q  23 gaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattac 122  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||| |||  | |||| | |||||||| |||||||| ||||||           ||||||    
T  49618654 gaggttttccggacgagttcttgaaattcctcaattaagagttgaggaccggaccgtaactttattt-ggaatatggttgctt-----------cattac 49618741  T
Q  123 ccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatac 216  Q
    ||| |||| |||||||||  ||||||| || || || |||||| |||||||||||  |||| ||| ||||| |||||| |||||| || |||||    
T  49618742 cctcatgattcctatatttatgattatatttctgttttggattaccttataaatatcggtagggatgcggatatacttgttcagagaggaatac 49618835  T

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