View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2867_high_6 (Length: 348)

Name: NF2867_high_6
Description: NF2867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2867_high_6
NF2867_high_6
[»] chr4 (37 HSPs)
chr4 (1-332)||(27613240-27613566)
chr4 (86-332)||(514120-514371)
chr4 (86-332)||(18307550-18307801)
chr4 (44-86)||(33808066-33808108)
chr4 (46-86)||(44490026-44490066)
chr4 (35-86)||(17846991-17847042)
chr4 (47-86)||(48552002-48552041)
chr4 (39-86)||(51371361-51371408)
chr4 (49-86)||(10588776-10588813)
chr4 (41-86)||(23553260-23553305)
chr4 (45-86)||(28264487-28264528)
chr4 (46-86)||(36444587-36444627)
chr4 (46-86)||(40988478-40988518)
chr4 (47-86)||(2055102-2055141)
chr4 (47-86)||(5227586-5227625)
chr4 (47-86)||(17847409-17847448)
chr4 (47-86)||(19169051-19169090)
chr4 (47-86)||(19496431-19496470)
chr4 (47-86)||(22298336-22298375)
chr4 (47-86)||(26017269-26017308)
chr4 (47-86)||(28160240-28160279)
chr4 (47-86)||(30141362-30141401)
chr4 (47-86)||(42549877-42549916)
chr4 (47-86)||(50276420-50276459)
chr4 (40-86)||(24623324-24623370)
chr4 (48-86)||(25734508-25734546)
chr4 (48-86)||(28812194-28812232)
chr4 (48-86)||(31208566-31208604)
chr4 (48-86)||(31973787-31973825)
chr4 (44-86)||(41355196-41355238)
chr4 (44-86)||(49118454-49118496)
chr4 (47-80)||(8882305-8882338)
chr4 (45-86)||(33173924-33173965)
chr4 (39-80)||(56555435-56555476)
chr4 (38-86)||(12196286-12196334)
chr4 (46-86)||(22298714-22298754)
chr4 (50-86)||(28159862-28159898)
[»] chr7 (22 HSPs)
chr7 (86-332)||(6939281-6939532)
chr7 (47-86)||(43753060-43753099)
chr7 (43-85)||(31684036-31684078)
chr7 (48-86)||(41107200-41107238)
chr7 (45-86)||(11476841-11476882)
chr7 (46-86)||(47119836-47119876)
chr7 (47-86)||(37394282-37394321)
chr7 (47-86)||(39033878-39033917)
chr7 (47-86)||(43968544-43968583)
chr7 (47-86)||(47281411-47281450)
chr7 (44-86)||(33884168-33884209)
chr7 (48-86)||(40851130-40851168)
chr7 (48-86)||(45233714-45233752)
chr7 (48-86)||(47281030-47281068)
chr7 (49-86)||(18353341-18353378)
chr7 (45-86)||(27772980-27773021)
chr7 (46-86)||(1469778-1469818)
chr7 (46-86)||(2960545-2960585)
chr7 (50-86)||(29739521-29739557)
chr7 (46-86)||(30876455-30876495)
chr7 (46-86)||(45723396-45723436)
chr7 (46-86)||(47294196-47294236)
[»] chr5 (31 HSPs)
chr5 (205-332)||(41909931-41910055)
chr5 (38-86)||(3352286-3352334)
chr5 (47-86)||(16751962-16752001)
chr5 (44-86)||(11001013-11001055)
chr5 (44-86)||(26593565-26593607)
chr5 (40-86)||(42993328-42993374)
chr5 (46-86)||(6600041-6600081)
chr5 (50-86)||(8689767-8689803)
chr5 (46-86)||(33003237-33003277)
chr5 (47-86)||(6600421-6600460)
chr5 (47-86)||(8689389-8689428)
chr5 (47-86)||(9919188-9919227)
chr5 (39-86)||(9919801-9919848)
chr5 (47-86)||(11935294-11935333)
chr5 (47-86)||(17002441-17002480)
chr5 (47-86)||(20408729-20408768)
chr5 (47-86)||(26035272-26035311)
chr5 (47-86)||(27116005-27116044)
chr5 (47-86)||(27457103-27457142)
chr5 (47-86)||(35861490-35861529)
chr5 (48-87)||(42993713-42993752)
chr5 (44-86)||(20079542-20079584)
chr5 (44-86)||(31710096-31710138)
chr5 (44-86)||(35341994-35342036)
chr5 (45-86)||(19661916-19661957)
chr5 (49-86)||(40075146-40075183)
chr5 (46-86)||(6252168-6252208)
chr5 (46-86)||(8216096-8216136)
chr5 (50-86)||(11692432-11692468)
chr5 (46-86)||(28078690-28078730)
chr5 (46-86)||(39125941-39125981)
[»] chr2 (20 HSPs)
chr2 (45-86)||(3430529-3430570)
chr2 (45-86)||(17484454-17484495)
chr2 (38-86)||(42630158-42630206)
chr2 (43-86)||(36211243-36211286)
chr2 (46-86)||(920838-920878)
chr2 (50-86)||(45123967-45124003)
chr2 (46-85)||(7378779-7378818)
chr2 (42-85)||(16246479-16246522)
chr2 (47-86)||(23671718-23671757)
chr2 (44-86)||(2094314-2094356)
chr2 (52-86)||(2455832-2455866)
chr2 (44-86)||(8396474-8396516)
chr2 (40-86)||(17270431-17270476)
chr2 (48-86)||(41178304-41178342)
chr2 (49-86)||(36210865-36210902)
chr2 (44-76)||(20026232-20026264)
chr2 (46-86)||(31214102-31214142)
chr2 (46-86)||(37732098-37732138)
chr2 (46-86)||(41500778-41500818)
chr2 (34-86)||(43249305-43249357)
[»] chr1 (22 HSPs)
chr1 (38-86)||(34971264-34971312)
chr1 (48-86)||(21929340-21929378)
chr1 (45-86)||(18917720-18917761)
chr1 (45-86)||(49594866-49594907)
chr1 (46-86)||(46051646-46051686)
chr1 (50-86)||(46095360-46095396)
chr1 (45-80)||(24036576-24036611)
chr1 (47-86)||(30281807-30281846)
chr1 (47-86)||(36157962-36158001)
chr1 (47-86)||(49094996-49095035)
chr1 (44-86)||(16705713-16705755)
chr1 (52-86)||(16706066-16706100)
chr1 (48-86)||(18781996-18782034)
chr1 (48-86)||(19274377-19274415)
chr1 (40-86)||(21929722-21929767)
chr1 (48-86)||(24204755-24204793)
chr1 (48-86)||(41105834-41105872)
chr1 (45-86)||(25800837-25800878)
chr1 (45-86)||(28425267-28425308)
chr1 (39-80)||(48319308-48319349)
chr1 (50-86)||(7651509-7651545)
chr1 (46-86)||(24204376-24204416)
[»] scaffold0002 (1 HSPs)
scaffold0002 (277-332)||(177012-177067)
[»] chr6 (15 HSPs)
chr6 (47-86)||(6785007-6785046)
chr6 (46-86)||(26393294-26393334)
chr6 (47-86)||(12613106-12613145)
chr6 (46-85)||(12626833-12626872)
chr6 (47-86)||(17428178-17428217)
chr6 (40-86)||(1077433-1077479)
chr6 (48-86)||(1915628-1915666)
chr6 (48-86)||(2643932-2643970)
chr6 (44-86)||(29050086-29050128)
chr6 (48-86)||(30457509-30457547)
chr6 (45-86)||(3408033-3408074)
chr6 (49-86)||(30378836-30378873)
chr6 (37-85)||(2390101-2390149)
chr6 (47-79)||(12626453-12626485)
chr6 (46-86)||(17942854-17942894)
[»] chr3 (37 HSPs)
chr3 (47-86)||(20813726-20813765)
chr3 (47-86)||(47329459-47329498)
chr3 (44-86)||(1448638-1448680)
chr3 (48-86)||(47329082-47329120)
chr3 (36-86)||(51562358-51562408)
chr3 (45-86)||(1016888-1016929)
chr3 (37-86)||(1687487-1687536)
chr3 (41-86)||(19664352-19664397)
chr3 (45-86)||(20086218-20086259)
chr3 (49-86)||(42016724-42016761)
chr3 (46-86)||(8097217-8097257)
chr3 (46-86)||(36315257-36315297)
chr3 (46-86)||(38446293-38446333)
chr3 (46-86)||(44152516-44152556)
chr3 (47-86)||(20760356-20760395)
chr3 (47-86)||(21564342-21564381)
chr3 (47-86)||(21656714-21656753)
chr3 (47-86)||(31122858-31122897)
chr3 (47-86)||(47473076-47473115)
chr3 (47-86)||(53926265-53926304)
chr3 (48-86)||(10618388-10618426)
chr3 (36-86)||(12748556-12748606)
chr3 (48-86)||(19229246-19229284)
chr3 (40-86)||(21564692-21564738)
chr3 (44-86)||(32651105-32651147)
chr3 (37-86)||(33473524-33473574)
chr3 (44-86)||(35608386-35608428)
chr3 (44-86)||(41250731-41250773)
chr3 (40-86)||(50287376-50287422)
chr3 (45-86)||(21890366-21890407)
chr3 (45-86)||(49799015-49799056)
chr3 (45-86)||(49799348-49799389)
chr3 (49-86)||(53196209-53196246)
chr3 (241-289)||(14994312-14994360)
chr3 (46-86)||(22851812-22851852)
chr3 (46-86)||(44152869-44152909)
chr3 (46-86)||(55164400-55164440)
[»] chr8 (15 HSPs)
chr8 (44-86)||(1293301-1293343)
chr8 (45-86)||(9884671-9884712)
chr8 (292-332)||(21949058-21949098)
chr8 (46-86)||(24430476-24430516)
chr8 (49-80)||(1293689-1293720)
chr8 (47-86)||(24430857-24430896)
chr8 (47-86)||(43468909-43468948)
chr8 (48-86)||(3875786-3875824)
chr8 (48-86)||(22684244-22684282)
chr8 (36-86)||(28496250-28496300)
chr8 (50-86)||(6016381-6016417)
chr8 (50-86)||(7435058-7435094)
chr8 (46-86)||(24193568-24193608)
chr8 (46-86)||(33652037-33652077)
chr8 (46-86)||(41536432-41536472)
[»] scaffold0727 (1 HSPs)
scaffold0727 (41-86)||(5381-5426)
[»] scaffold0717 (1 HSPs)
scaffold0717 (47-86)||(2042-2081)
[»] scaffold0117 (1 HSPs)
scaffold0117 (47-86)||(14495-14534)


Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 27613240 - 27613566
Alignment:
Q  1 gtacttgatataacttattaaaaaatgttatacgttaataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgttttaatttatagtgata 100  Q
    |||||||||||||||||||||||||||||||| ||||| |         |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27613240 gtacttgatataacttattaaaaaatgttataagttaaga---------tcaaatgcatctaaaggtcctttaagtttttcgttttaatttatagtgata 27613330  T
Q  101 gttacatgtttcatgttgtttgaggtttttt-acttatctcagtatttttaacttcaatgttagggttaggtaccagttcaaatatgataaaagtttgta 199  Q
     |||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  27613331 attacatgtttcatgttgtttgaggtttttttacttatctcaatttttttaacttcaatgttagggttaggtaccggttcaaatatgataaaagtttgca 27613430  T
Q  200 ttttatttttt---ggaagtggttggaatgtgttcttatctattaataggtttttggttcccatatcctattgttgcaaatgcttgtcaaaaagtgtttg 296  Q
    |||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27613431 tttttttttttttgggaagtggttggaatgtgttcttatctattaataggtttttggttcccatattctattgttgcaaatgcttgtcaaaaagtgtttg 27613530  T
Q  297 taactaatcatgtgggggattttggtttattattag 332  Q
    ||||||||||||||||||||||||||||||||||||    
T  27613531 taactaatcatgtgggggattttggtttattattag 27613566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 86 - 332
Target Start/End: Original strand, 514120 - 514371
Alignment:
Q  86 taatttatagtgatagttacatgtttcatgttg-------tttgaggttttttacttatctcagtatttttaa--cttcaatgttagggttaggtaccag 176  Q
    |||||||||||||||||||||||| ||||| |        |||||| |||||||||||||| ||| |||||||  |||||||||||||||||| ||| ||    
T  514120 taatttatagtgatagttacatgtctcatgatcaaggctatttgagattttttacttatctgagtttttttaatacttcaatgttagggttagttactag 514219  T
Q  177 ttcaaatatgataaaagtttgtattttattttttggaagtggttggaatgtgttcttatctattaataggtttttggttcccatatcctattgttgcaaa 276  Q
    ||||||| ||||| |||||| ||||||    || |||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||  |||||    
T  514220 ttcaaatttgatacaagtttatatttt----ttgggaattggttggaatgtgttcttatctattaataggtttttggttcacacgtcctattgcggcaaa 514315  T
Q  277 tgcttgtcaaaaagtgtttgtaactaatcatgtgggggattttggtttattattag 332  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  514316 tgcttgtcaaaaagcgtttgtaactaatcgtgtgggggattttggtttattattag 514371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 86 - 332
Target Start/End: Complemental strand, 18307801 - 18307550
Alignment:
Q  86 taatttatagtgatagttacatgtttcatgttg-------tttgaggttttttacttatctcagtatttttaa--cttcaatgttagggttaggtaccag 176  Q
    |||||||||||||||||||||||| ||||| |        |||||| |||||||||||||| ||| |||||||  |||||||||||||||||| ||| ||    
T  18307801 taatttatagtgatagttacatgtctcatgatcaaggctatttgagattttttacttatctgagtttttttaatacttcaatgttagggttagttactag 18307702  T
Q  177 ttcaaatatgataaaagtttgtattttattttttggaagtggttggaatgtgttcttatctattaataggtttttggttcccatatcctattgttgcaaa 276  Q
    ||||||| ||||| |||||| ||||||    || |||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||  |||||    
T  18307701 ttcaaatttgatacaagtttatatttt----ttgggaattggttggaatgtgttcttatctattaataggtttttggttcacacgtcctattgcggcaaa 18307606  T
Q  277 tgcttgtcaaaaagtgtttgtaactaatcatgtgggggattttggtttattattag 332  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18307605 tgcttgtcaaaaagcgtttgtaactaatcgtgtgggggattttggtttattattag 18307550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 33808108 - 33808066
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  33808108 aaaaggtcaaatgcatctaaaggttctttaagtttttcgtttt 33808066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 44490026 - 44490066
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  44490026 aaggtcaaatgcatctaaaggttctttaagtttttcgtttt 44490066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 17846991 - 17847042
Alignment:
Q  35 ttaataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||| | |||||||||||||||||||||| |||||| |||||||||||    
T  17846991 ttaataaaaataaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 17847042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 48552041 - 48552002
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  48552041 aggtcaaatgcatctaaaggttctttaagtttttcgtttt 48552002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 51371408 - 51371361
Alignment:
Q  39 taaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||    
T  51371408 taaaaaaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 51371361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 10588813 - 10588776
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  10588813 gtcaaatgcatctaaaggtcctttaaatttttcgtttt 10588776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 23553305 - 23553260
Alignment:
Q  41 aataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||    
T  23553305 aataaatggtcaaatgcatctaaaggtcctttaagtttttcgtttt 23553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 28264487 - 28264528
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  28264487 aaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 28264528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 36444587 - 36444627
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  36444587 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 36444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 40988478 - 40988518
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  40988478 aaggttaaatgcatctaaaggttctttaaattttttgtttt 40988518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 2055102 - 2055141
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  2055102 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 2055141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 5227625 - 5227586
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  5227625 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 5227586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 17847448 - 17847409
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  17847448 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 17847409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 19169090 - 19169051
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  19169090 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 19169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 19496470 - 19496431
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  19496470 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 19496431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 22298336 - 22298375
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  22298336 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 22298375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 26017269 - 26017308
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  26017269 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 26017308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 28160279 - 28160240
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  28160279 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 28160240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 30141401 - 30141362
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  30141401 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 30141362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 42549916 - 42549877
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  42549916 aggtcaaatacatctaaaggttctttaagtttttcgtttt 42549877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 50276459 - 50276420
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  50276459 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 50276420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 24623370 - 24623324
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||||    
T  24623370 aaataaaaggtcaaatgcatcttaaggtcttttaagtttttcgtttt 24623324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 25734546 - 25734508
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  25734546 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 25734508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 28812194 - 28812232
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  28812194 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 28812232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 31208566 - 31208604
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  31208566 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 31208604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 31973825 - 31973787
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31973825 ggtcaaatgcatctaaatgtcctttaaatttttcgtttt 31973787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 41355196 - 41355238
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||    
T  41355196 aaaagatcaaatgcatctaaaggtcctttaaatttttcatttt 41355238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 49118454 - 49118496
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  49118454 aaaaagtcaaatgcatctaaaggtcctttaagtttttcgtttt 49118496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 8882338 - 8882305
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaattttt 80  Q
    ||||||||||||||||||||| ||||||||||||    
T  8882338 aggtcaaatgcatctaaaggtcctttaaattttt 8882305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 33173924 - 33173965
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  33173924 aaaggtcaaatgcatctaaaggtcctttaagtttttcatttt 33173965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 56555476 - 56555435
Alignment:
Q  39 taaataaaaggtcaaatgcatctaaaggttctttaaattttt 80  Q
    |||| |||||||||||||||||||||||| |||||| |||||    
T  56555476 taaaaaaaaggtcaaatgcatctaaaggtcctttaagttttt 56555435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 12196286 - 12196334
Alignment:
Q  38 ataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||  ||||||||||||| ||||||| |||||| |||||||||||    
T  12196286 ataaatattaggtcaaatgcatttaaaggtcctttaagtttttcgtttt 12196334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 22298754 - 22298714
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  22298754 aaggtcaaatgcatctaaatgtcctttaagtttttcgtttt 22298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 28159862 - 28159898
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| |||||| |||||||||||    
T  28159862 tcaaatgcatctaaaggtcctttaagtttttcgtttt 28159898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 86 - 332
Target Start/End: Original strand, 6939281 - 6939532
Alignment:
Q  86 taatttatagtgatagttacatgtttcatgttg-------tttgaggttttttacttatctcagtatttttaa--cttcaatgttagggttaggtaccag 176  Q
    |||||||||||||||||||||||| ||||| |        |||||| |||||||||||||| ||| |||||||  |||||||||||||||||| ||| ||    
T  6939281 taatttatagtgatagttacatgtctcatgatcaaggctatttgagattttttacttatctgagtttttttaatacttcaatgttagggttagttactag 6939380  T
Q  177 ttcaaatatgataaaagtttgtattttattttttggaagtggttggaatgtgttcttatctattaataggtttttggttcccatatcctattgttgcaaa 276  Q
    ||||||| ||||| |||||| ||||||    || |||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||  |||||    
T  6939381 ttcaaatttgatacaagtttatatttt----ttgggaattggttggaatgtgttcttatctattaataggtttttggttcacacgtcctattgcggcaaa 6939476  T
Q  277 tgcttgtcaaaaagtgtttgtaactaatcatgtgggggattttggtttattattag 332  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  6939477 tgcttgtcaaaaagcgtttgtaactaatcgtgtgggggattttggtttattattag 6939532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 43753099 - 43753060
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43753099 aggtcaaatgcatctaaaggttctttaagtttttcgtttt 43753060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 31684036 - 31684078
Alignment:
Q  43 taaaaggtcaaatgcatctaaaggttctttaaatttttcgttt 85  Q
    ||||||||||||||||||||||||| |||||| ||||||||||    
T  31684036 taaaaggtcaaatgcatctaaaggtcctttaagtttttcgttt 31684078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 41107200 - 41107238
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41107200 ggtcaaatgcatctaaatgttctttaaatttttcgtttt 41107238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 11476882 - 11476841
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  11476882 aaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 11476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 47119836 - 47119876
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  47119836 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 47119876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 37394321 - 37394282
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  37394321 aggttaaatgcatctaaaggttctttaagtttttcgtttt 37394282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 39033878 - 39033917
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  39033878 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 39033917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 43968583 - 43968544
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  43968583 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 43968544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 47281450 - 47281411
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  47281450 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 47281411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 33884168 - 33884209
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  33884168 aaaaggtcaaatgcatctaaaggtt-tttaaattttttgtttt 33884209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 40851130 - 40851168
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  40851130 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 40851168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 45233752 - 45233714
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  45233752 ggtcaaatgcatctaaaggtcctttaaatttttcatttt 45233714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 47281030 - 47281068
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  47281030 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 47281068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 18353378 - 18353341
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  18353378 gtcaaatgcatctaaaagttctttaagtttttcgtttt 18353341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 27772980 - 27773021
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| ||||| |||||    
T  27772980 aaaggtcaaatgcatctaaaggtcctttaagtttttagtttt 27773021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 1469818 - 1469778
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  1469818 aaggtcaaatgcatctaaatgtcctttaagtttttcgtttt 1469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 2960545 - 2960585
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| || ||||||||    
T  2960545 aaggtcaaatgcatctaaaggtcctttaagttgttcgtttt 2960585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 29739521 - 29739557
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| |||||| |||||||||||    
T  29739521 tcaaatgcatctaaaggtcctttaagtttttcgtttt 29739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 30876495 - 30876455
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| ||||||| |||||| |||||||||||    
T  30876495 aaggtcaaatgcatttaaaggtcctttaagtttttcgtttt 30876455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 45723396 - 45723436
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  45723396 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 45723436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 47294196 - 47294236
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  47294196 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 47294236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 41910055 - 41909931
Alignment:
Q  205 ttttttggaagtggttggaatgtgttcttatctattaataggtttttggttcccatatcctattgttgcaaatgcttgtcaaaaagtgtttgtaactaat 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||  ||||||||  ||||||||||||||||||| |||||||| ||||    
T  41910055 ttttttggaattggttggaatgtgttcttatctattaataggtttttagttcacacgtcctattgcggcaaatgcttgtcaaaaagcgtttgtaattaat 41909956  T
Q  305 catgtgggggattttggtttattattag 332  Q
    | ||||||    ||||||||||||||||    
T  41909955 cgtgtggg---atttggtttattattag 41909931  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 3352334 - 3352286
Alignment:
Q  38 ataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  3352334 ataaaaaataggtcaaatgcatctaaaggtcctttaaatttttcgtttt 3352286  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 16751962 - 16752001
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  16751962 aggtcaaatgcatctaaaggtcctttaaatttttcgtttt 16752001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 11001055 - 11001013
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  11001055 aaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 11001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 26593607 - 26593565
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  26593607 aaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 26593565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 42993328 - 42993374
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||    
T  42993328 aaataataggtcaaatgcatctaaaggtcccttaaatttttcgtttt 42993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 6600041 - 6600081
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  6600041 aaggtcaaatgcatctaaacgttctttaagtttttcgtttt 6600081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 8689803 - 8689767
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8689803 tcaaatgcatctaaaggttctttaagtttttcgtttt 8689767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 33003277 - 33003237
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  33003277 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 33003237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 6600460 - 6600421
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  6600460 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 6600421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 8689389 - 8689428
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  8689389 aggtcaaatgcatttaaaggttctttaagtttttcgtttt 8689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 9919188 - 9919227
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  9919188 aggtcaaatgcatccaaaggtcctttaaatttttcgtttt 9919227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 9919848 - 9919801
Alignment:
Q  39 taaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||||||| |||||| |||||| |||||||||||    
T  9919848 taaaaaaaaggtcaaatgcatccaaaggtcctttaagtttttcgtttt 9919801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 11935294 - 11935333
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  11935294 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 11935333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 17002480 - 17002441
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  17002480 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 17002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 20408768 - 20408729
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  20408768 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 20408729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 26035272 - 26035311
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  26035272 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 26035311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 27116005 - 27116044
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  27116005 aggtcaaatgtatctaaaggttctttaagtttttcgtttt 27116044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 27457103 - 27457142
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  27457103 aggtcaaatgcatttaaaggttctttaagtttttcgtttt 27457142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 35861529 - 35861490
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  35861529 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 35861490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 42993752 - 42993713
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttta 87  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  42993752 ggtcaaatgcatctaaatgtcctttaaatttttcgtttta 42993713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 20079584 - 20079542
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||| ||||||||||| |||||| |||||||||||    
T  20079584 aaaaggtcaaatacatctaaaggtcctttaagtttttcgtttt 20079542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 31710096 - 31710138
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||| ||||||||||| |||||| |||||||||||    
T  31710096 aaaaggtcaaatacatctaaaggtcctttaagtttttcgtttt 31710138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 35341994 - 35342036
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||| |||| ||||||||| |||||||||||    
T  35341994 aaaaggtcaaatgcatttaaatgttctttaagtttttcgtttt 35342036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 19661957 - 19661916
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||  ||||| |||||||||||    
T  19661957 aaaggtcaaatgcatctaaaggtcgtttaagtttttcgtttt 19661916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 40075183 - 40075146
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40075183 gtcaaatgcatctaaagattctttaaatttttcatttt 40075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 6252208 - 6252168
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  6252208 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 6252168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 8216136 - 8216096
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  8216136 aaggtcaaatgcatttaaaggtcctttaaatttttcatttt 8216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 11692468 - 11692432
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  11692468 tcaaatgtatctaaaggttctttaagtttttcgtttt 11692432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 28078730 - 28078690
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  28078730 aaggtcaaatgcatctaaaagtcctttaagtttttcgtttt 28078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 39125941 - 39125981
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| | |||||| |||||||||||    
T  39125941 aaggtcaaatgcatctaaagatcctttaagtttttcgtttt 39125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 3430529 - 3430570
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  3430529 aaaggtcaaatgcatctaaaggttctttaagtttttcgtttt 3430570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 17484454 - 17484495
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  17484454 aaaggtcaaatgcatctaaaggttctttaagtttttcgtttt 17484495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 42630206 - 42630158
Alignment:
Q  38 ataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  42630206 ataaataaaaggtcaaatgcatctaaaggtcttttaagtttttcgtttt 42630158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 36211286 - 36211243
Alignment:
Q  43 taaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  36211286 taaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 36211243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 920838 - 920878
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  920838 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 920878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 45123967 - 45124003
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||| |||||||||||    
T  45123967 tcaaatgcatctaaaggttctttaagtttttcgtttt 45124003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 7378779 - 7378818
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgttt 85  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  7378779 aaggtcaaatgaatctaaaggttctttaagtttttcgttt 7378818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 16246522 - 16246479
Alignment:
Q  42 ataaaaggtcaaatgcatctaaaggttctttaaatttttcgttt 85  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||    
T  16246522 ataaatggtcaaatgcatctaaaggtcctttaagtttttcgttt 16246479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 23671718 - 23671757
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  23671718 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 23671757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 2094314 - 2094356
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||| |||||| |||||| ||||    
T  2094314 aaaaggtcaaatgcatctaaaggtcctttaagtttttcatttt 2094356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 2455832 - 2455866
Alignment:
Q  52 aaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||||||||    
T  2455832 aaatgcatctaaaggttctttaagtttttcgtttt 2455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 8396474 - 8396516
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||| || ||||||||| |||||    
T  8396474 aaaaggtcaaatgcatctaaaggtcctataaattttttgtttt 8396516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 17270476 - 17270431
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  17270476 aaataaaaggtcaaatgcatctaaagg-tctttaagttttttgtttt 17270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 41178342 - 41178304
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  41178342 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 41178304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 36210865 - 36210902
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  36210865 gtcaaatgcatctgaaggttctttaagtttttcgtttt 36210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 20026264 - 20026232
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaat 76  Q
    ||||||||||||||||| |||||||||||||||    
T  20026264 aaaaggtcaaatgcatccaaaggttctttaaat 20026232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 31214142 - 31214102
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||  ||||| |||||||||||    
T  31214142 aaggtcaaatgcatctaaaggtcttttaagtttttcgtttt 31214102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 37732098 - 37732138
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  37732098 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 37732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 41500818 - 41500778
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||  ||||| |||||||||||    
T  41500818 aaggtcaaatgcatctaaaggtcatttaagtttttcgtttt 41500778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 43249305 - 43249357
Alignment:
Q  34 gttaataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||  |||| |||||||||||||||||| |||||| |||||| ||||    
T  43249305 gttaataaactaaagatcaaatgcatctaaaggtcctttaagtttttcatttt 43249357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 34971312 - 34971264
Alignment:
Q  38 ataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||    
T  34971312 ataaagaaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 34971264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 21929340 - 21929378
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21929340 ggtcaaatgcatctaaaggtcctttaaatttttcgtttt 21929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 18917761 - 18917720
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  18917761 aaaggtcaaatgcatttaaaggttctttaagtttttcgtttt 18917720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 49594866 - 49594907
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  49594866 aaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 49594907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 46051686 - 46051646
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  46051686 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 46051646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 46095396 - 46095360
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| ||||||||||||||||||    
T  46095396 tcaaatgcatctaaaggtcctttaaatttttcgtttt 46095360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 24036576 - 24036611
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaattttt 80  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24036576 aaaggtcaaatgcatctaaaggtcctttaaattttt 24036611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 30281846 - 30281807
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  30281846 aggtcaaatgtatctaaaggtcctttaaatttttcgtttt 30281807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 36158001 - 36157962
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  36158001 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 36157962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 49095035 - 49094996
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  49095035 aggtcaaatgcatccaaaggttctttaagtttttcgtttt 49094996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 16705713 - 16705755
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||| |||||||||||||||| |||||| |||||||||||    
T  16705713 aaaaggtgaaatgcatctaaaggtcctttaagtttttcgtttt 16705755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 16706100 - 16706066
Alignment:
Q  52 aaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||||||||    
T  16706100 aaatgcatctaaaggttctttaagtttttcgtttt 16706066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 18781996 - 18782034
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  18781996 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 18782034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 19274377 - 19274415
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  19274377 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 19274415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 21929767 - 21929722
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||||    
T  21929767 aaataaaatgtcaaatgcatctaaagg-tctttaagtttttcgtttt 21929722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 24204793 - 24204755
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  24204793 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 24204755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 41105834 - 41105872
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  41105834 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 41105872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 25800878 - 25800837
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  25800878 aaaggtcaaatgcatctaaaggtcctttaagtttttcttttt 25800837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 28425267 - 28425308
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  28425267 aaaggtcaaatgcatctaaaggtcctttaagtttttcatttt 28425308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 48319349 - 48319308
Alignment:
Q  39 taaataaaaggtcaaatgcatctaaaggttctttaaattttt 80  Q
    ||||| |||||||||||||||||||||||| ||||| |||||    
T  48319349 taaattaaaggtcaaatgcatctaaaggttatttaagttttt 48319308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 7651509 - 7651545
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| |||||| |||||||||||    
T  7651509 tcaaatgcatctaaaggtcctttaagtttttcgtttt 7651545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 24204376 - 24204416
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  24204376 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 24204416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 177012 - 177067
Alignment:
Q  277 tgcttgtcaaaaagtgtttgtaactaatcatgtgggggattttggtttattattag 332  Q
    ||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||||    
T  177012 tgcttgtcaaaaagcttttgtaactaatcgtgtaggggattttggtctattattag 177067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 6785007 - 6785046
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  6785007 aggtcaaatgcatctaaaggttctttaagtttttcgtttt 6785046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 26393334 - 26393294
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  26393334 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 26393294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 12613145 - 12613106
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  12613145 aggtcaaatgcatctaaaggttctttaagtttttcatttt 12613106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 12626872 - 12626833
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgttt 85  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  12626872 aaggtcaaatgcatctaaaggtcctttaagtttttcgttt 12626833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 17428178 - 17428217
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  17428178 aggtcaaatgcatctaaagattctttaagtttttcgtttt 17428217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 1077479 - 1077433
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||| ||||||||| |||||| |||||||||||    
T  1077479 aaattaaaggtcaaatgcgtctaaaggtcctttaagtttttcgtttt 1077433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 1915666 - 1915628
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  1915666 ggtcaaatgcatctaaaagtcctttaaatttttcgtttt 1915628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 2643932 - 2643970
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  2643932 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 2643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 29050086 - 29050128
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| || |||||| |||||||||||    
T  29050086 aaaaggtcaaatgcatctaaaagtcctttaagtttttcgtttt 29050128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 30457547 - 30457509
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  30457547 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 30457509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 3408033 - 3408074
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  3408033 aaaggtcaaatgcatctaaaagtcctttaagtttttcgtttt 3408074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 30378836 - 30378873
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  30378836 gtcaaatgcatctaaaggtcctttaagtttttcgtttt 30378873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 2390101 - 2390149
Alignment:
Q  37 aataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgttt 85  Q
    ||||||||  |||||||||||||||||||||  ||||| ||||||||||    
T  2390101 aataaatattaggtcaaatgcatctaaaggtcttttaagtttttcgttt 2390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 12626453 - 12626485
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttt 79  Q
    |||||||||||||||||||||||||||| ||||    
T  12626453 aggtcaaatgcatctaaaggttctttaagtttt 12626485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 17942854 - 17942894
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| ||||||| |||||| |||||||||||    
T  17942854 aaggtcaaatgcatttaaaggtcctttaagtttttcgtttt 17942894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 20813765 - 20813726
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  20813765 aggtcaaatgcatctaaaggtcctttaaatttttcgtttt 20813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 47329498 - 47329459
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  47329498 aggtcaaatgcatctaaaggttctttaagtttttcgtttt 47329459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 1448638 - 1448680
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  1448638 aaaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 1448680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 47329082 - 47329120
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  47329082 ggtcaaatgcatctaaaggttctttaagtttttcgtttt 47329120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 51562408 - 51562358
Alignment:
Q  36 taataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||| | |||||||||||||||||||| ||||||||| |||||||||||    
T  51562408 taataacttaaaggtcaaatgcatctaaaagttctttaagtttttcgtttt 51562358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 1016888 - 1016929
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  1016888 aaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 1016929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 1687487 - 1687536
Alignment:
Q  37 aataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||| || |||||||||||||||||||| |||||| |||||||||||    
T  1687487 aataaattaagggtcaaatgcatctaaaggtcctttaagtttttcgtttt 1687536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 19664352 - 19664397
Alignment:
Q  41 aataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||    
T  19664352 aataataggtcaaatgcatctaaaggtcctttaagtttttcgtttt 19664397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 20086218 - 20086259
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  20086218 aaaggtcaaatgcatctaaaggtcctttaaattttttgtttt 20086259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 42016724 - 42016761
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||| |||||||||||||||||||||    
T  42016724 gtcaaatgcatctaaaagttctttaaatttttcgtttt 42016761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 8097257 - 8097217
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  8097257 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 8097217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 36315297 - 36315257
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  36315297 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 36315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 38446293 - 38446333
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  38446293 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 38446333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 44152516 - 44152556
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  44152516 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 44152556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 20760395 - 20760356
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  20760395 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 20760356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 21564342 - 21564381
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  21564342 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 21564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 21656753 - 21656714
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  21656753 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 21656714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 31122897 - 31122858
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  31122897 aggtcaaatgcatctaaaggtcctttaactttttcgtttt 31122858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 47473076 - 47473115
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  47473076 aggtcaaatgcatctaaagattctttaagtttttcgtttt 47473115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 53926304 - 53926265
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  53926304 aggtcaaatgcatctaaaggtccattaaatttttcgtttt 53926265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 10618388 - 10618426
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  10618388 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 10618426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 12748606 - 12748556
Alignment:
Q  36 taataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||| ||||||||||||| ||||||| |||||| |||| ||||||    
T  12748606 taataaataataggtcaaatgcatttaaaggtcctttaagttttacgtttt 12748556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 19229284 - 19229246
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  19229284 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 19229246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 21564738 - 21564692
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||||||||||| | |||||| |||||||||||    
T  21564738 aaattaaaggtcaaatgcatctaaagatcctttaagtttttcgtttt 21564692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 32651147 - 32651105
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||| |||||||||||||||| |||||| |||||||||||    
T  32651147 aaaaggtgaaatgcatctaaaggtcctttaagtttttcgtttt 32651105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 33473574 - 33473524
Alignment:
Q  37 aataaataaaaggtcaaatgcatctaaaggttc-tttaaatttttcgtttt 86  Q
    |||||||||| ||||||||||||||||| |||| ||||| |||||||||||    
T  33473574 aataaataaagggtcaaatgcatctaaatgttcttttaagtttttcgtttt 33473524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 35608428 - 35608386
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| ||| |||||| |||||||||||    
T  35608428 aaaaggtcaaatgcatctaacggtcctttaagtttttcgtttt 35608386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 41250731 - 41250773
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  41250731 aaaatgtcaaatgcatctaaaggtcctttaagtttttcgtttt 41250773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 50287376 - 50287422
Alignment:
Q  40 aaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  50287376 aaataataggtcaaatgcatctaaaggtcctttaagtttttcatttt 50287422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 21890407 - 21890366
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  21890407 aaaggtcaaatgcatctaaaagtcctttaagtttttcgtttt 21890366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 49799015 - 49799056
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| ||||| |||||    
T  49799015 aaaggtcaaatgcatctaaaggtcctttaagttttttgtttt 49799056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 49799389 - 49799348
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| ||| || |||||||||||    
T  49799389 aaaggtcaaatgcatctaaaggtccttaaagtttttcgtttt 49799348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 53196246 - 53196209
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  53196246 gtcaaatgcatctaaaggtcctttaagtttttcgtttt 53196209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 14994312 - 14994360
Alignment:
Q  241 aataggtttttggttcccatatcctattgttgcaaatgcttgtcaaaaa 289  Q
    |||||||||||||||| ||  ||||||||  ||||||||||||||||||    
T  14994312 aataggtttttggttcgcacgtcctattgcggcaaatgcttgtcaaaaa 14994360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 22851812 - 22851852
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| | |||| |||||||||||    
T  22851812 aaggtcaaatgcatctaaaggtccgttaagtttttcgtttt 22851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 44152909 - 44152869
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  44152909 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 44152869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 55164440 - 55164400
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||| ||||||||||| |||||| |||||||||||    
T  55164440 aaggtcaaatacatctaaaggtcctttaagtttttcgtttt 55164400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 1293301 - 1293343
Alignment:
Q  44 aaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  1293301 aaaaggtcaaatgcatctaaatgttctttaagtttttcgtttt 1293343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 9884671 - 9884712
Alignment:
Q  45 aaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  9884671 aaaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 9884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 21949058 - 21949098
Alignment:
Q  292 gtttgtaactaatcatgtgggggattttggtttattattag 332  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  21949058 gtttgtaactaatcgtgtgggggattctggtttattattag 21949098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 24430476 - 24430516
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  24430476 aaggtcaaatgcatctaaaggtcctttaagtttttcgtttt 24430516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 80
Target Start/End: Complemental strand, 1293720 - 1293689
Alignment:
Q  49 gtcaaatgcatctaaaggttctttaaattttt 80  Q
    ||||||||||||||||||||||||||||||||    
T  1293720 gtcaaatgcatctaaaggttctttaaattttt 1293689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 24430896 - 24430857
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  24430896 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 24430857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 43468909 - 43468948
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  43468909 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 43468948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 3875786 - 3875824
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  3875786 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 3875824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 22684282 - 22684244
Alignment:
Q  48 ggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  22684282 ggtcaaatgcatctaaaggtcctttaagtttttcgtttt 22684244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 28496250 - 28496300
Alignment:
Q  36 taataaataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||| ||||    
T  28496250 taataaatttaaggtcaaatgcatctaaaagtcctttaaatttttcatttt 28496300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 6016417 - 6016381
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| |||||| |||||||||||    
T  6016417 tcaaatgcatctaaaggtcctttaagtttttcgtttt 6016381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 7435094 - 7435058
Alignment:
Q  50 tcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||| |||||| |||||||||||    
T  7435094 tcaaatgcatctaaaggtcctttaagtttttcgtttt 7435058  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 24193608 - 24193568
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| ||||||| |||||| |||||||||||    
T  24193608 aaggtcaaatgcatttaaaggtcctttaagtttttcgtttt 24193568  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 33652077 - 33652037
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  33652077 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 33652037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 41536432 - 41536472
Alignment:
Q  46 aaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  41536432 aaggtcaaatgcatctaaaggtcctttaagtttttcatttt 41536472  T

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Target: scaffold0727 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 5426 - 5381
Alignment:
Q  41 aataaaaggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||    
T  5426 aataaatggtcaaatgcatctaaaggtcctttaagtttttcgtttt 5381  T

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Target: scaffold0717 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 2081 - 2042
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  2081 aggtcaaatgcatcaaaaggtcctttaaatttttcgtttt 2042  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 14495 - 14534
Alignment:
Q  47 aggtcaaatgcatctaaaggttctttaaatttttcgtttt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  14495 aggtcaaatgcatctaaaggtcctttaagtttttcgtttt 14534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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