View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2867_high_9 (Length: 337)

Name: NF2867_high_9
Description: NF2867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2867_high_9
NF2867_high_9
[»] chr5 (52 HSPs)
chr5 (125-323)||(35299866-35300064)
chr5 (130-182)||(39594913-39594965)
chr5 (128-186)||(7705906-7705964)
chr5 (36-181)||(12857251-12857398)
chr5 (136-185)||(14331478-14331527)
chr5 (128-181)||(34736440-34736493)
chr5 (128-180)||(10640057-10640109)
chr5 (101-176)||(32941546-32941622)
chr5 (128-175)||(41419423-41419470)
chr5 (128-175)||(41534542-41534589)
chr5 (128-174)||(9107194-9107240)
chr5 (128-181)||(3932589-3932642)
chr5 (128-173)||(7674751-7674796)
chr5 (146-183)||(9174938-9174975)
chr5 (128-177)||(16937800-16937849)
chr5 (130-183)||(32942700-32942753)
chr5 (128-180)||(6521182-6521234)
chr5 (128-172)||(11064770-11064814)
chr5 (128-184)||(12433083-12433139)
chr5 (137-177)||(17369316-17369356)
chr5 (132-172)||(22209746-22209786)
chr5 (133-177)||(32010054-32010098)
chr5 (128-180)||(40426869-40426921)
chr5 (99-179)||(41535456-41535536)
chr5 (136-175)||(499650-499689)
chr5 (128-167)||(12425677-12425716)
chr5 (132-179)||(15246941-15246988)
chr5 (130-176)||(4625835-4625881)
chr5 (130-176)||(9202666-9202712)
chr5 (99-181)||(12857618-12857700)
chr5 (145-175)||(14932417-14932447)
chr5 (103-181)||(34102226-34102304)
chr5 (137-175)||(36796626-36796664)
chr5 (145-179)||(40335788-40335822)
chr5 (145-183)||(42646791-42646829)
chr5 (128-173)||(6096651-6096696)
chr5 (149-178)||(11707168-11707197)
chr5 (135-176)||(32197844-32197885)
chr5 (139-176)||(42647005-42647042)
chr5 (128-176)||(1773024-1773072)
chr5 (147-183)||(8651263-8651299)
chr5 (136-176)||(10638453-10638493)
chr5 (145-185)||(11153355-11153395)
chr5 (137-173)||(14706205-14706241)
chr5 (103-163)||(15015922-15015982)
chr5 (133-181)||(25461561-25461609)
chr5 (145-177)||(26004914-26004946)
chr5 (136-176)||(34205353-34205393)
chr5 (128-176)||(35445762-35445810)
chr5 (146-174)||(35963351-35963379)
chr5 (128-180)||(42500157-42500209)
chr5 (103-175)||(42582607-42582679)
[»] chr7 (41 HSPs)
chr7 (1-185)||(33266395-33266579)
chr7 (101-177)||(19302480-19302556)
chr7 (99-179)||(4970707-4970787)
chr7 (105-173)||(9210902-9210970)
chr7 (99-181)||(18962496-18962578)
chr7 (128-177)||(44822062-44822111)
chr7 (99-175)||(11619077-11619153)
chr7 (144-184)||(25596152-25596192)
chr7 (130-181)||(33673183-33673234)
chr7 (132-183)||(48470152-48470203)
chr7 (134-183)||(37064379-37064428)
chr7 (128-180)||(17944257-17944309)
chr7 (128-176)||(34036021-34036069)
chr7 (147-183)||(40371565-40371601)
chr7 (129-181)||(46078204-46078256)
chr7 (136-175)||(1418531-1418570)
chr7 (128-175)||(22283565-22283612)
chr7 (136-179)||(30748949-30748992)
chr7 (146-181)||(38138405-38138440)
chr7 (137-180)||(44917440-44917483)
chr7 (101-176)||(46407310-46407385)
chr7 (137-176)||(47046026-47046065)
chr7 (145-183)||(529483-529521)
chr7 (147-181)||(28340990-28341024)
chr7 (149-179)||(33128876-33128906)
chr7 (145-175)||(40598404-40598434)
chr7 (146-179)||(5947363-5947396)
chr7 (145-182)||(17988945-17988982)
chr7 (128-173)||(18765388-18765433)
chr7 (137-178)||(30812251-30812292)
chr7 (132-181)||(36517685-36517734)
chr7 (136-181)||(39771873-39771918)
chr7 (135-179)||(8427124-8427168)
chr7 (145-181)||(12234802-12234838)
chr7 (132-180)||(19719112-19719160)
chr7 (99-171)||(33678855-33678927)
chr7 (145-181)||(34083521-34083557)
chr7 (128-184)||(34744132-34744188)
chr7 (145-181)||(35267470-35267506)
chr7 (145-181)||(40252036-40252072)
chr7 (135-179)||(47134673-47134717)
[»] chr8 (38 HSPs)
chr8 (101-183)||(30251365-30251447)
chr8 (128-180)||(38602431-38602483)
chr8 (101-181)||(43717847-43717927)
chr8 (128-184)||(12496982-12497038)
chr8 (128-180)||(35534527-35534579)
chr8 (101-176)||(36963272-36963347)
chr8 (137-183)||(2606162-2606208)
chr8 (145-183)||(9700122-9700160)
chr8 (1-184)||(10758167-10758351)
chr8 (136-185)||(16163262-16163311)
chr8 (128-177)||(32213223-32213272)
chr8 (133-178)||(35374368-35374413)
chr8 (101-177)||(15180617-15180692)
chr8 (130-182)||(27493043-27493095)
chr8 (111-183)||(29818855-29818927)
chr8 (128-175)||(1096594-1096641)
chr8 (128-175)||(9130238-9130285)
chr8 (128-179)||(38648455-38648506)
chr8 (99-173)||(39551130-39551205)
chr8 (129-176)||(42893408-42893455)
chr8 (136-174)||(4560614-4560652)
chr8 (128-174)||(40859703-40859749)
chr8 (149-179)||(41475027-41475057)
chr8 (128-181)||(1074181-1074234)
chr8 (136-185)||(2487917-2487966)
chr8 (128-181)||(8407746-8407799)
chr8 (137-166)||(23996557-23996586)
chr8 (99-180)||(41589661-41589742)
chr8 (101-178)||(43045641-43045718)
chr8 (136-177)||(43368617-43368658)
chr8 (128-184)||(1057987-1058043)
chr8 (145-185)||(10727465-10727505)
chr8 (132-176)||(14280339-14280383)
chr8 (128-176)||(18930799-18930847)
chr8 (151-183)||(31862618-31862650)
chr8 (136-176)||(32976485-32976525)
chr8 (136-184)||(33553352-33553400)
chr8 (136-176)||(35928648-35928688)
[»] chr4 (49 HSPs)
chr4 (125-183)||(27043741-27043799)
chr4 (129-183)||(42403934-42403988)
chr4 (113-179)||(17822780-17822846)
chr4 (103-174)||(15173223-15173294)
chr4 (128-178)||(54426147-54426197)
chr4 (140-181)||(32769495-32769536)
chr4 (128-181)||(44797984-44798037)
chr4 (128-184)||(18815127-18815183)
chr4 (128-180)||(21731570-21731622)
chr4 (100-178)||(22538993-22539071)
chr4 (134-181)||(25571369-25571416)
chr4 (136-183)||(29126174-29126221)
chr4 (128-179)||(39691064-39691115)
chr4 (128-175)||(41336864-41336911)
chr4 (126-177)||(55437178-55437229)
chr4 (103-181)||(55414326-55414404)
chr4 (136-181)||(25717705-25717750)
chr4 (128-173)||(52315118-52315163)
chr4 (130-179)||(53294029-53294078)
chr4 (128-176)||(8705045-8705093)
chr4 (144-176)||(17975255-17975287)
chr4 (136-180)||(22662165-22662209)
chr4 (136-180)||(22666644-22666688)
chr4 (128-184)||(24169367-24169423)
chr4 (130-178)||(29388720-29388768)
chr4 (129-181)||(35571544-35571596)
chr4 (125-169)||(49003800-49003844)
chr4 (128-176)||(49940085-49940133)
chr4 (137-176)||(825407-825446)
chr4 (136-183)||(3639079-3639126)
chr4 (146-181)||(21953395-21953430)
chr4 (128-167)||(29657488-29657527)
chr4 (150-181)||(54581066-54581097)
chr4 (110-176)||(2244137-2244203)
chr4 (145-183)||(23319972-23320010)
chr4 (130-179)||(26780-26829)
chr4 (149-182)||(16494719-16494752)
chr4 (128-185)||(25904132-25904189)
chr4 (128-185)||(41512743-41512800)
chr4 (148-181)||(53315450-53315483)
chr4 (128-172)||(1408061-1408105)
chr4 (145-181)||(7367967-7368003)
chr4 (128-176)||(13126494-13126542)
chr4 (135-183)||(20656150-20656198)
chr4 (147-175)||(24193655-24193683)
chr4 (145-181)||(25309313-25309349)
chr4 (132-176)||(38336815-38336859)
chr4 (136-180)||(53034713-53034757)
chr4 (149-181)||(54726534-54726566)
[»] chr2 (50 HSPs)
chr2 (99-178)||(27317454-27317533)
chr2 (99-181)||(4607000-4607082)
chr2 (125-181)||(15305775-15305831)
chr2 (103-181)||(30331830-30331908)
chr2 (99-176)||(18179024-18179101)
chr2 (128-184)||(3312181-3312237)
chr2 (128-184)||(7928208-7928264)
chr2 (132-184)||(31744406-31744458)
chr2 (101-179)||(42419870-42419948)
chr2 (128-181)||(10619133-10619186)
chr2 (128-181)||(26202132-26202185)
chr2 (125-181)||(2416414-2416470)
chr2 (136-179)||(15370238-15370281)
chr2 (136-179)||(28803445-28803488)
chr2 (144-182)||(10563472-10563510)
chr2 (146-184)||(28810362-28810400)
chr2 (136-181)||(1830151-1830196)
chr2 (108-177)||(44119866-44119935)
chr2 (144-176)||(3078526-3078558)
chr2 (145-181)||(6772446-6772482)
chr2 (148-184)||(9996862-9996898)
chr2 (137-181)||(44438754-44438798)
chr2 (145-184)||(2790359-2790398)
chr2 (136-175)||(22878210-22878249)
chr2 (99-177)||(26143559-26143635)
chr2 (135-178)||(26548564-26548607)
chr2 (125-172)||(31561664-31561711)
chr2 (136-179)||(40759272-40759315)
chr2 (146-181)||(42868394-42868429)
chr2 (146-176)||(750856-750886)
chr2 (137-175)||(18525160-18525198)
chr2 (101-175)||(20952432-20952506)
chr2 (144-178)||(37448693-37448727)
chr2 (128-178)||(39659425-39659475)
chr2 (137-175)||(40837356-40837394)
chr2 (128-178)||(44590128-44590178)
chr2 (136-169)||(35809979-35810012)
chr2 (137-174)||(40059381-40059418)
chr2 (137-174)||(40085281-40085318)
chr2 (128-177)||(42659128-42659177)
chr2 (100-176)||(2142730-2142806)
chr2 (137-181)||(2964722-2964766)
chr2 (144-176)||(3070136-3070168)
chr2 (136-176)||(8017546-8017586)
chr2 (149-181)||(11307425-11307457)
chr2 (128-176)||(16398193-16398240)
chr2 (136-180)||(25790236-25790280)
chr2 (128-176)||(27317025-27317073)
chr2 (136-176)||(30990357-30990397)
chr2 (144-176)||(32821929-32821961)
[»] chr1 (47 HSPs)
chr1 (113-183)||(2295280-2295350)
chr1 (125-182)||(39976122-39976179)
chr1 (99-175)||(50644174-50644250)
chr1 (113-180)||(14385707-14385774)
chr1 (102-181)||(36872806-36872885)
chr1 (101-179)||(2295173-2295251)
chr1 (109-174)||(24334280-24334345)
chr1 (128-176)||(33204312-33204360)
chr1 (113-169)||(38116002-38116058)
chr1 (136-175)||(6292604-6292643)
chr1 (136-183)||(10199319-10199366)
chr1 (128-183)||(15477657-15477712)
chr1 (134-181)||(41505784-41505831)
chr1 (139-181)||(24460314-24460356)
chr1 (128-173)||(1432619-1432664)
chr1 (99-176)||(3233933-3234010)
chr1 (130-182)||(15784423-15784475)
chr1 (133-181)||(37473516-37473564)
chr1 (129-181)||(38247432-38247484)
chr1 (103-178)||(473242-473317)
chr1 (136-183)||(2194318-2194365)
chr1 (137-180)||(7217988-7218031)
chr1 (145-184)||(14576564-14576603)
chr1 (128-175)||(27146174-27146221)
chr1 (101-184)||(37617375-37617458)
chr1 (145-175)||(3319865-3319895)
chr1 (128-162)||(7028406-7028440)
chr1 (129-175)||(7069384-7069430)
chr1 (148-186)||(15558335-15558373)
chr1 (147-181)||(17269373-17269407)
chr1 (101-183)||(38001672-38001754)
chr1 (113-158)||(7107448-7107493)
chr1 (128-177)||(13810102-13810151)
chr1 (145-182)||(21002276-21002313)
chr1 (136-173)||(34303178-34303215)
chr1 (146-183)||(34952324-34952361)
chr1 (136-173)||(51929383-51929420)
chr1 (146-182)||(3597193-3597229)
chr1 (151-183)||(3887543-3887575)
chr1 (137-173)||(5157185-5157221)
chr1 (147-175)||(5886911-5886939)
chr1 (128-168)||(6102257-6102297)
chr1 (145-181)||(26866434-26866470)
chr1 (137-173)||(29793619-29793655)
chr1 (136-176)||(32958749-32958789)
chr1 (145-177)||(33723299-33723331)
chr1 (145-177)||(37241738-37241770)
[»] chr6 (32 HSPs)
chr6 (128-181)||(21405067-21405120)
chr6 (130-182)||(35069524-35069576)
chr6 (136-179)||(2457053-2457096)
chr6 (113-183)||(24982794-24982864)
chr6 (128-181)||(848093-848145)
chr6 (135-180)||(30536879-30536924)
chr6 (138-182)||(33027706-33027750)
chr6 (129-181)||(34404639-34404691)
chr6 (129-176)||(835179-835226)
chr6 (99-162)||(2455334-2455397)
chr6 (132-175)||(4163261-4163304)
chr6 (132-175)||(4224882-4224925)
chr6 (128-183)||(6536716-6536771)
chr6 (145-176)||(9202903-9202934)
chr6 (145-180)||(12111088-12111123)
chr6 (101-175)||(33089582-33089657)
chr6 (135-181)||(9604902-9604948)
chr6 (129-175)||(18612411-18612457)
chr6 (143-181)||(19800370-19800408)
chr6 (149-183)||(29249518-29249552)
chr6 (145-175)||(31776191-31776221)
chr6 (145-179)||(32205928-32205962)
chr6 (149-178)||(103555-103584)
chr6 (128-173)||(35071598-35071643)
chr6 (145-181)||(507318-507354)
chr6 (136-168)||(2455922-2455954)
chr6 (148-176)||(9202253-9202281)
chr6 (146-182)||(10452333-10452369)
chr6 (99-175)||(10645304-10645380)
chr6 (136-176)||(31624372-31624412)
chr6 (136-176)||(33068520-33068560)
chr6 (128-180)||(35070568-35070620)
[»] chr3 (43 HSPs)
chr3 (101-174)||(584123-584196)
chr3 (128-177)||(16072958-16073007)
chr3 (101-174)||(24085258-24085331)
chr3 (128-176)||(25447163-25447211)
chr3 (101-180)||(42799880-42799960)
chr3 (102-175)||(34610725-34610798)
chr3 (128-178)||(20170630-20170680)
chr3 (146-180)||(51929863-51929897)
chr3 (128-173)||(18405752-18405797)
chr3 (132-173)||(26911699-26911740)
chr3 (138-175)||(26990144-26990181)
chr3 (140-181)||(32663754-32663795)
chr3 (131-172)||(33405114-33405155)
chr3 (136-185)||(44014317-44014366)
chr3 (103-183)||(47132397-47132475)
chr3 (101-174)||(51929277-51929350)
chr3 (147-183)||(1820043-1820079)
chr3 (125-177)||(9832672-9832724)
chr3 (146-182)||(15304280-15304316)
chr3 (149-185)||(45541696-45541732)
chr3 (132-175)||(24684741-24684784)
chr3 (99-178)||(42747698-42747777)
chr3 (128-175)||(46478771-46478818)
chr3 (147-181)||(2100092-2100126)
chr3 (146-184)||(4534285-4534323)
chr3 (146-184)||(27896088-27896126)
chr3 (131-185)||(34235002-34235056)
chr3 (135-173)||(46407617-46407655)
chr3 (145-175)||(46407863-46407893)
chr3 (130-163)||(5448550-5448583)
chr3 (128-181)||(39980833-39980886)
chr3 (128-189)||(49556968-49557029)
chr3 (146-174)||(20669471-20669499)
chr3 (129-173)||(21367772-21367816)
chr3 (128-176)||(22203533-22203581)
chr3 (135-179)||(29114536-29114580)
chr3 (136-180)||(30573829-30573872)
chr3 (139-175)||(31615479-31615515)
chr3 (145-181)||(36769876-36769912)
chr3 (131-183)||(38902172-38902224)
chr3 (138-182)||(45432865-45432909)
chr3 (99-163)||(46778122-46778186)
chr3 (149-177)||(49845457-49845485)
[»] scaffold0020 (1 HSPs)
scaffold0020 (145-180)||(159887-159922)


Alignment Details
Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 125 - 323
Target Start/End: Original strand, 35299866 - 35300064
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttagagtataaagaacttaacttagtttttacttcacagctagt 224  Q
    ||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35299866 gtttctcaaaactcatgtcaatagataagctcaaataagtcaatccaaacaggcccttagagtataaagaacttaacttggtttttacttcacagctagt 35299965  T
Q  225 ttatcaagaaaacacacatcacaaattacttttatatcaaaatcaactttaatcaaatcatgaatcatattttgcaaactaaaactccatctacttcat 323  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  35299966 ttatcaagaaaacccatatcacaaattacttttatatcaaaatcaactttaatcaaatcatgaattatattttgcaaactaaaactccatctaattcat 35300064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 39594913 - 39594965
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39594913 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaagccctt 39594965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 7705964 - 7705906
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttagag 186  Q
    ||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||    
T  7705964 tcacaaaacttatgctagtagatatgctcaaataagtcaatccaaacaggcccttagag 7705906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 12857398 - 12857251
Alignment:
Q  36 ttttataagctacattagaaaaattacaaaaataagctgnnnnnnncttttgcgaattgtcat--gttgttttcgtaaattctccaaaatggtttcacaa 133  Q
    |||||||||||| ||| || || ||||||||||||||||       ||| ||  |||||||||  ||||||||| ||| ||||||  ||  |||||||||    
T  12857398 ttttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctccggaaaagtttcacaa 12857299  T
Q  134 aacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||| |||  |||||||||||||||||  ||||||||||| |||||    
T  12857298 aacttacgtcaatagataagctcaaataaaccaatccaaacaagccct 12857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 14331478 - 14331527
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  14331478 cttatgacagtagataagctcaaataagtcaatccaaacagacccttaga 14331527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 34736493 - 34736440
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| |||||    
T  34736493 tcacaaaacttatgtcaccagataagctcaaataagtcaatccaaacatgccct 34736440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 10640057 - 10640109
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  10640057 tcacaaaacttatgtcagtagataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 32941546 - 32941622
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataa-gctcaaataagtcaatccaaacag 176  Q
    ||||||| ||| |||||| ||| ||| ||||| |||||||||| |||||||| |||| |||||||||||||||||||    
T  32941546 tgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataagtcaatccaaacag 32941622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 41419423 - 41419470
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  41419423 tcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 41534542 - 41534589
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  41534542 tcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 9107194 - 9107240
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||    
T  9107194 tcacaaaacttatgtcactagataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 3932642 - 3932589
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||| ||||||| | ||||||||||||||| ||||||||||||||| ||||    
T  3932642 tcacaaagcttatgttgttagataagctcaaattagtcaatccaaacagtccct 3932589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 7674751 - 7674796
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||| || |||||||||||||||||||| |||||||||    
T  7674751 tcacaaaacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 9174938 - 9174975
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9174938 tagataagctcaaataagtcaatccaaacatgccctta 9174975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 16937849 - 16937800
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  16937849 tcacaaaacttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 32942700 - 32942753
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||    
T  32942700 acaaaacttatgtcagtagaaaagctcgtataagtcaatccaaacaggcgctta 32942753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 6521182 - 6521234
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||| |||||| |||| | ||||| |||||||||||||||||||||||    
T  6521182 tcacaaaacatatgtcagtagttcagctctaataagtcaatccaaacaggccc 6521234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 11064770 - 11064814
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaa 172  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||    
T  11064770 tcacaaaacttatgttggtagataaactcaaataaatcaatccaa 11064814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 12433139 - 12433083
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||| |||| | ||| ||||| ||||||||| ||||||||||||||||||||    
T  12433139 tcacaaaacctatgccagtaaataagttcaaataagccaatccaaacaggcccttag 12433083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 17369316 - 17369356
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  17369316 ttatgtcagtagataagttcaaataagtcaatccaaacagg 17369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 22209786 - 22209746
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaa 172  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  22209786 aaaacttatgccagtagataagctcaaataagtcaatccaa 22209746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 32010054 - 32010098
Alignment:
Q  133 aaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  32010054 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 32010098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 40426869 - 40426921
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||| |||||||  |||||||||||||||||||||| | ||||||||||    
T  40426869 tcacaaaatttatgtcattagataagctcaaataagtcaaccaaaacaggccc 40426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 41535456 - 41535536
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||| ||| |||||| |||  ||||||||||||| || |  ||||||||||| ||||||| |||||| ||||||||    
T  41535456 gttgttttcataagttctcccaaactgtttcacaaaactgatataagtagataagcttaaataagccaatccgaacaggcc 41535536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 499689 - 499650
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  499689 cttatgtcagtaggtaagctcaaataagtcaatccaaaca 499650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 12425677 - 12425716
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaa 167  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  12425677 tcacaaaacttatgacagtagataagctcaaataagtcaa 12425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 15246941 - 15246988
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||||    
T  15246941 aaaacttatgtcagtagataagctcaaataaacaaatccaaacaggcc 15246988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 4625835 - 4625881
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||| || ||||||||||||||||||||||| | ||||||    
T  4625835 acaaaacttatttccgtagataagctcaaataagtcaaactaaacag 4625881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 9202712 - 9202666
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||| | | ||||||||||||||||||||||||| ||||    
T  9202712 acaaaacttatgccaggagataagctcaaataagtcaatccatacag 9202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 12857700 - 12857618
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||| ||| ||||||  ||  ||||||||||||||| |||  ||||| |||||||||||  ||||||||||| |||||    
T  12857700 gttgttttcataagttctccggaacagtttcacaaaacttacgtcaatagatgagctcaaataaaccaatccaaacaagccct 12857618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 14932417 - 14932447
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||||    
T  14932417 gtagataagctcaaataagtcaatccaaaca 14932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 34102304 - 34102226
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| ||||||| || |||  || |||||||||||||| |  ||| ||||||||||||||| | ||||||||||||||    
T  34102304 ttttcataaattcccccaaacagtgtcacaaaacttatgccaatagttaagctcaaataagtgattccaaacaggccct 34102226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 36796664 - 36796626
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  36796664 ttatgtcattagataagctcaaataagtcaatccaaaca 36796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 40335822 - 40335788
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||| ||||||||||||||||||||||||||    
T  40335822 gtagataaactcaaataagtcaatccaaacaggcc 40335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 42646791 - 42646829
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  42646791 gtagataagctcaagtaagtcaatccaaacagaccctta 42646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 6096651 - 6096696
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||| | ||||||||| ||||||| |||||||||||    
T  6096651 tcacaaaacttatgccagtagataagttcaaatacgtcaatccaaa 6096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 11707168 - 11707197
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||||||||||||||||||||||||    
T  11707168 ataagctcaaataagtcaatccaaacaggc 11707197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 32197844 - 32197885
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  32197844 acttatgtcagtagataaactcaaaaaagtcaatccaaacag 32197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 42647005 - 42647042
Alignment:
Q  139 atgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  42647005 atgtcagtagataagctcaaataagccaatccaaacag 42647042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 1773072 - 1773024
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||||   ||||||||||| ||||||| ||||||||||||    
T  1773072 tcacaaaacttatggaagtagataagctaaaataagccaatccaaacag 1773024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 8651299 - 8651263
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  8651299 agataagctcaaataaggcaatccaaacatgccctta 8651263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 10638493 - 10638453
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||| ||||||||| || ||||||||||||||||||||    
T  10638493 cttatgttggtagataatcttaaataagtcaatccaaacag 10638453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 11153395 - 11153355
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    ||||||||||||||| ||| |||||||||||| ||||||||    
T  11153395 gtagataagctcaaacaagccaatccaaacagccccttaga 11153355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 14706241 - 14706205
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  14706241 ttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 15015922 - 15015982
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataag 163  Q
    ||||| ||| |||||| |||  || ||||||| |||||||| |||||||||||||||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 25461609 - 25461561
Alignment:
Q  133 aaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||  | |||||||||||||||||| |||||||||| ||||||    
T  25461609 aaacttatgctgatagataagctcaaataagccaatccaaacgggccct 25461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 26004946 - 26004914
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||| |||||||||||||||||||||    
T  26004946 gtagataagctaaaataagtcaatccaaacagg 26004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 34205353 - 34205393
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| ||| ||||| ||||||||||||||||||||||    
T  34205353 cttatgtcagtaaataagttcaaataagtcaatccaaacag 34205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 35445810 - 35445762
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||| |||||||| ||||||||||   ||||||||||    
T  35445810 tcacaaaacttatgtcagtagataaactcaaataagatgatccaaacag 35445762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 174
Target Start/End: Original strand, 35963351 - 35963379
Alignment:
Q  146 tagataagctcaaataagtcaatccaaac 174  Q
    |||||||||||||||||||||||||||||    
T  35963351 tagataagctcaaataagtcaatccaaac 35963379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 42500209 - 42500157
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||| |||| ||||  |||||||  ||||||||||||||||    
T  42500209 tcacaaaacttatgtcagtaggtaagtccaaataaaccaatccaaacaggccc 42500157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 42582679 - 42582607
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||| ||| ||||||||||  |  ||||||||||||| ||  ||||||  ||||||||||||||||||||||    
T  42582679 ttttcttaagttctccaaaacagcctcacaaaacttatatcattagataccctcaaataagtcaatccaaaca 42582607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 4e-78; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 33266579 - 33266395
Alignment:
Q  1 aaagttaaattgcttttctacatcctataagttctttttataagctacattagaaaaattacaaaaataagctgnnnnnnncttttgcgaattgtcatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  33266579 aaagttaaattgcttttctacatcctataagttctttttataagctacattagaaaaattacaaaaataagctgaaaaaaacttttgcgaattgtcatgt 33266480  T
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  33266479 tgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacatacccttaga 33266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 19302556 - 19302480
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||| |||||||||| ||||  | |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  19302556 tgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaacagg 19302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 4970787 - 4970707
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||| ||| |||||| |||  || |||||| |||||||||   |||||||||||||||||||||||||||||||||    
T  4970787 gttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaacaggcc 4970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 9210902 - 9210970
Alignment:
Q  105 ttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||| |||  || ||| ||||||||| || |||||||||||||||||||||||||||||    
T  9210902 ttcgtaaattctcccaaacagtctcagaaaacttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 18962578 - 18962496
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||| |||| ||| ||||||||||  || | |||||||||||||| ||||||||| || ||||| ||||||||||||||||||    
T  18962578 gttggtttcataagttctccaaaacagtctaacaaaacttatgtcagtagataagatcgaataactcaatccaaacaggccct 18962496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 44822062 - 44822111
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  44822062 tcacaaaacttatgtcagcagataaactcaaataagtcaatccaaacagg 44822111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 11619153 - 11619077
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||||| |||||||||| ||   ||||||  || |||||||| ||||||||||||||||||| |||||||||||    
T  11619153 gttgttttcataaattctcccaatctgtttcatgaagcttatgtcagtagataagctcaaataagccaatccaaaca 11619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 25596152 - 25596192
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  25596152 ggtagataagctcaaataagtcagtccaaacaggcccttag 25596192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 33673183 - 33673234
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| |||||||| |||||||||||||||| |||||||||||| |||||||    
T  33673183 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 33673234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 48470152 - 48470203
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||  |||||||||||||||||| |||||| ||||||||||||    
T  48470152 aaaacttatgtctatagataagctcaaataagccaatcctaacaggccctta 48470203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 37064428 - 37064379
Alignment:
Q  134 aacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||| || ||||||||| |||||||||||||||||||||| ||||||    
T  37064428 aacttatatcagtagataagatcaaataagtcaatccaaacagaccctta 37064379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 17944309 - 17944257
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||| |||||| | ||||||||||| |||||||||| |||||||||||||    
T  17944309 tcacaaagcttatgccagtagataagcttaaataagtcactccaaacaggccc 17944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 34036021 - 34036069
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||| || |||||| |||||||||||||||||||||||| |||||||    
T  34036021 tcacaatacatatgtcagtagataagctcaaataagtcaattcaaacag 34036069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 40371601 - 40371565
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40371601 agataagctcaaataagtcaatccaaacatgccctta 40371565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 46078204 - 46078256
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||  |||||||||| ||||||| |||||||| ||||||||    
T  46078204 cacaaaacttatgtcaatagataagctaaaataagccaatccaaccaggccct 46078256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 1418531 - 1418570
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  1418531 cttatgccagtagataagctcaaataagtcaatccaaaca 1418570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 22283612 - 22283565
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| ||||| | ||||||||| |||||||||||||||||||||    
T  22283612 tcacaaaatttatgacagtagataagttcaaataagtcaatccaaaca 22283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 30748992 - 30748949
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||    
T  30748992 cttatgtcagtagataagctcaaataactcaattcaaacaggcc 30748949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 38138440 - 38138405
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38138440 tagataagctcaaataagtcattccaaacaggccct 38138405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 44917483 - 44917440
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
T  44917483 ttatgtcgggagataaactcaaataagtcaatccaaacatgccc 44917440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 46407310 - 46407385
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||| ||| |||||| || | ||||| ||||||||||| | |||||||||||||| |||| |||||| |||||    
T  46407310 tgttttcataagttctcccaagtagtttcccaaaacttatggcagtagataagctcaattaagccaatcctaacag 46407385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 47046065 - 47046026
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  47046065 ttatgtcagtagataagcacaaataagtcaatccaaacag 47046026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 529483 - 529521
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  529483 gtagataagctcaaataagtcaatccaatcagaccctta 529521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 28341024 - 28340990
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||||||||||||| ||||    
T  28341024 agataagctcaaataagtcaatccaaacagaccct 28340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 33128876 - 33128906
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||||||||||||||||||||||||||    
T  33128876 ataagctcaaataagtcaatccaaacaggcc 33128906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 40598434 - 40598404
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||||    
T  40598434 gtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 5947363 - 5947396
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||||||||||||| |||||||||||||||    
T  5947363 tagataagctcaaataagccaatccaaacaggcc 5947396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 17988982 - 17988945
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  17988982 gtagataagctcaaataagttaatccaaacaagccctt 17988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 18765388 - 18765433
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||    
T  18765388 tcacaaaacttatgtcaatagataagctcaaataaagcaatccaaa 18765433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 30812251 - 30812292
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  30812251 ttatgtcagtaggtaaactcaaataagtcaatccaaacaggc 30812292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 36517685 - 36517734
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||| | |||| ||||||||||||| | ||||||||||||||||    
T  36517685 aaaacttatgccagtagctaagctcaaataaatgaatccaaacaggccct 36517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 39771873 - 39771918
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||  ||||||||||||||||| |||| |||||||||||||    
T  39771873 cttatgtcaatagataagctcaaataactcaacccaaacaggccct 39771918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 8427124 - 8427168
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||  |||||||||||||||||| |||||||||| |||||    
T  8427124 acttatgttagtagataagctcaaataaatcaatccaaataggcc 8427168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 12234838 - 12234802
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||| |||||||||||||| |||||||    
T  12234838 gtagataagctcaactaagtcaatccaaataggccct 12234802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 19719112 - 19719160
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||| |||  |||||||||||| |||||| |||||||||||||||    
T  19719112 aaaacttaagtcaatagataagctcacataagtaaatccaaacaggccc 19719160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 33678855 - 33678927
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatcca 171  Q
    ||||||||| ||| |||||| |||| || ||||||||||||||   ||||||||| | ||||||| |||||||    
T  33678855 gttgttttcataagttctcccaaattgtctcacaaaacttatgcaagtagataagtttaaataagccaatcca 33678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 34083557 - 34083521
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||| |||||||||||||||||||||||| |||||    
T  34083557 gtagatgagctcaaataagtcaatccaaacatgccct 34083521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 34744132 - 34744188
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||| |||||||  |||||||||||||||| | ||||| |||||||| ||||||    
T  34744132 tcacaaatcttatgttagtagataagctcaaattattcaattcaaacaggtccttag 34744188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 35267470 - 35267506
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||||||| |||| |||||||    
T  35267470 gtagataagctcaaataagtcaattcaaataggccct 35267506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 40252072 - 40252036
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  40252072 gtagataagctcaaataagccaattcaaacaggccct 40252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 47134717 - 47134673
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||  |||| |||| ||||||||||||||||||||||||||    
T  47134717 acttatggtggtaaataaactcaaataagtcaatccaaacaggcc 47134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 30251447 - 30251365
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||| |||||| |||  || |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  30251447 tgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaacaggccctta 30251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 38602431 - 38602483
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38602431 tcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 43717927 - 43717847
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||| ||| |||||| |||| || ||||||||||||||||  |||||||||||||||||| ||||||||| |||||||    
T  43717927 tgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaataggccct 43717847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 12497038 - 12496982
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||||||||| | | |||||||||||||||| |||||||||| ||||||||||    
T  12497038 tcacaaaacttatgccaggagataagctcaaataaatcaatccaaataggcccttag 12496982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 35534579 - 35534527
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  35534579 tcacaaaacttatgttagtagataagctcaaataagtcattctaaacaggccc 35534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 36963347 - 36963272
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||| |||| |||||| |||  || |||||||||||||| | |||||| |||||||||||| ||||||||||||    
T  36963347 tgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaacag 36963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 2606162 - 2606208
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  2606162 ttatgtcagtagataagctcgaataagtcaatccaaacaagccctta 2606208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 9700122 - 9700160
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9700122 gtagataagctcaaataagttaatccaaacaggccctta 9700160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 10758351 - 10758167
Alignment:
Q  1 aaagttaaattgcttttctacatcctataagttctttttataagctacattagaaaaattacaaaaataagctgnnnnnnncttttgcgaattgtcat-- 98  Q
    |||||||||||| |||| || || ||||||||| | ||||||||||| ||||| ||  |||  |||| ||||||       ||||||  |||||||||      
T  10758351 aaagttaaattgtttttgtatatgctataagttgtctttataagctatattagcaac-ttatgaaaacaagctgaaaaaagcttttgaaaattgtcataa 10758253  T
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    | ||||||| ||||||||   |||  || |||||||||||||||  | ||||||| |||||||||||||| |||||| ||||||||    
T  10758252 gctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaacatgcccttag 10758167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 16163311 - 16163262
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||| ||| |||||||||| ||||||||||||||||| ||||||||||||    
T  16163311 cttaagtcagtagataagcccaaataagtcaatccaatcaggcccttaga 16163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 32213223 - 32213272
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||||| || ||| ||||||||||||||| |||||||||||||    
T  32213223 tcacaaaacttatatcagtatataagctcaaataagacaatccaaacagg 32213272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 35374413 - 35374368
Alignment:
Q  133 aaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||    
T  35374413 aaacttgtgtgggtagataagctcaaataactcaatccaaacaggc 35374368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 15180617 - 15180692
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||  ||||||||||||| | | ||| |||||||||| | |||||||| |||||||||| |||||||||||||    
T  15180617 tgttttcagaaattctccaaaaag-tctcataaaacttatggcagtagataaactcaaataagccaatccaaacagg 15180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 27493043 - 27493095
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||  | | |||||||||||||||||| |||||||||||||||||    
T  27493043 acaaaacttataccagcagataagctcaaataagttaatccaaacaggccctt 27493095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 29818927 - 29818855
Alignment:
Q  111 aattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||| |||  || ||||||||||||||   ||||||||||||||||| | ||||||||||| |||||||    
T  29818927 aattctccgaaacagtctcacaaaacttatgatagtagataagctcaaatatgccaatccaaacatgccctta 29818855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 1096594 - 1096641
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||    
T  1096594 tcacaaaacttatgtcactaaataaactcaaataagtcaatccaaaca 1096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 9130285 - 9130238
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||| | |||||||||||||||||||  ||||||||||    
T  9130285 tcacaaaacttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 38648455 - 38648506
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||||||||||| |||||||| || ||||||| |||||| ||||||||    
T  38648455 tcacaaaacttatgtcagtagataatcttaaataagccaatcctaacaggcc 38648506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 39551205 - 39551130
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaa-cttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    ||||||| | |||||||||| |||  ||||||||||  ||||| || |||||||| ||||||||||||||||||||    
T  39551205 gttgtttccataaattctcccaaacagtttcacaaatgcttatatccgtagataatctcaaataagtcaatccaaa 39551130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 42893455 - 42893408
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||| ||||| |||||||||| ||||||||||| |||||||||||    
T  42893455 cacaaaaattatgccggtagataaactcaaataagttaatccaaacag 42893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 4560614 - 4560652
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  4560614 cttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 40859749 - 40859703
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||    
T  40859749 tcacaaaacttatgttagcagataagctcaaataagccaatccaaac 40859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 41475057 - 41475027
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||||||||||||||||||||||||||    
T  41475057 ataagctcaaataagtcaatccaaacaggcc 41475027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 1074234 - 1074181
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||||| |||||    
T  1074234 tcacaaaacttatatgagtaaataaactcaaataagtcaatccaaacaagccct 1074181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 2487966 - 2487917
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||| |||||| | |||||||||| ||||||||||| |||||||||    
T  2487966 cttatgtcagtagatgaactcaaataagccaatccaaacatgcccttaga 2487917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 8407746 - 8407799
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||| |||| || ||||||| |||||||| || ||||||||||||||||    
T  8407746 tcacaaaacctatgccgctagataaactcaaatatgtgaatccaaacaggccct 8407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 23996586 - 23996557
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtca 166  Q
    ||||||||||||||||||||||||||||||    
T  23996586 ttatgtcggtagataagctcaaataagtca 23996557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 41589661 - 41589742
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||| ||| ||||||||||  || ||| ||| |||||||| ||||| ||||||||||||  ||||| ||||| ||||    
T  41589661 gttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataaaccaatctaaacaagccc 41589742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 43045718 - 43045641
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||| |||  |||||||||  || ||||||| ||||||   ||||||||||| ||||||| ||||||||||||||    
T  43045718 tgttttcataagatctccaaaacagtctcacaaatcttatgctagtagataagcttaaataagccaatccaaacaggc 43045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 43368658 - 43368617
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||  ||||||||| |||||||||||||||||||||||    
T  43368658 cttatgttagtagataagatcaaataagtcaatccaaacagg 43368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 1058043 - 1057987
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||||||||||  ||||||||||||||||||| || | |||||  ||||||||    
T  1058043 tcacaaaacttatgtaagtagataagctcaaataagccagttcaaacttgcccttag 1057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 10727465 - 10727505
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||| ||||||||||||||||||||||| ||| ||||    
T  10727465 gtagataaactcaaataagtcaatccaaacagacccataga 10727505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 14280383 - 14280339
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||| | ||||||||  ||||||||||||||||||||||    
T  14280383 aaaacttatgccagtagataaaatcaaataagtcaatccaaacag 14280339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 18930799 - 18930847
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||| ||| || ||| ||| |||||||||||||||||||||||    
T  18930799 tcacaaaactcatgccgttaggtaaactcaaataagtcaatccaaacag 18930847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 31862618 - 31862650
Alignment:
Q  151 aagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||| ||||||||||||||    
T  31862618 aagctcaaataagtcaattcaaacaggccctta 31862650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 32976485 - 32976525
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  32976485 cttatgtcagtagataagctcaaataagggaatccaaacag 32976525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 33553352 - 33553400
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||| | ||||||||||||||||||  |||||||||| ||||||||    
T  33553352 cttatgttgatagataagctcaaataagctaatccaaacaagcccttag 33553400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 35928688 - 35928648
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| ||||||||||| ||||||| ||||||||||||    
T  35928688 cttatgtcagtagataagctaaaataagacaatccaaacag 35928648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 27043799 - 27043741
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  27043799 gtttcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacagaccctta 27043741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 42403988 - 42403934
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  42403988 cacaaaacttatgtcagttgataagctcaaataagtcaatccaaacaggccctta 42403934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 17822846 - 17822780
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||| |||| || ||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  17822846 ttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 15173294 - 15173223
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||| |||| ||||| |||  || |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  15173294 ttttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 54426147 - 54426197
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  54426147 tcacaaaacttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 32769495 - 32769536
Alignment:
Q  140 tgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32769495 tgtcggtagataagctaaaataagtcaatccaaacaggccct 32769536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 44797984 - 44798037
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||| ||||||||||| |||| || |||||||||||||||||    
T  44797984 tcacaaaacttatgtcagtagataagcttaaatcagccaatccaaacaggccct 44798037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 18815127 - 18815183
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||||||||   |||| |||||||||||||| ||||||||||||||||||||    
T  18815127 tcacaaaacttatgctagtaggtaagctcaaataagccaatccaaacaggcccttag 18815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 21731622 - 21731570
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  21731622 tcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacaggccc 21731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 22539071 - 22538993
Alignment:
Q  100 ttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaa-taagtcaatccaaacaggc 178  Q
    |||||||||||| |||||| |||| || ||||||| |||||| | ||||||||||||||| |||||||||||||| ||||    
T  22539071 ttgttttcgtaagttctcccaaattgtctcacaaa-cttatgccagtagataagctcaaagtaagtcaatccaaagaggc 22538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 25571369 - 25571416
Alignment:
Q  134 aacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  25571369 aacttatgtcagtagataaactcaaataagccaatccaaacaggccct 25571416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 29126221 - 29126174
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  29126221 cttatgccggtagataagctcaaataagccaatccaaacaagccctta 29126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 39691115 - 39691064
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  39691115 tcacaaaacttatgctagtagataagctcaaataagtcaattcaaacaggcc 39691064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 41336864 - 41336911
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||||    
T  41336864 tcacaaaacttatgtgagtagataaactcaaataagtcaatccaaaca 41336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 55437178 - 55437229
Alignment:
Q  126 tttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||||||||||| | |||||||| |||||||||| |||||||||||||    
T  55437178 tttcacaaaacttatggcagtagataaactcaaataagccaatccaaacagg 55437229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 55414404 - 55414326
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| |||||||||| |||  |  |||||||| ||||| | |||||||  ||||||||||||||||||||||||||||    
T  55414404 ttttcataaattctcctaaacagcatcacaaaaattatgccagtagatactctcaaataagtcaatccaaacaggccct 55414326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 25717705 - 25717750
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  25717705 cttatgtcggtacataagctcaaataagacaatccaaacaagccct 25717750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 52315163 - 52315118
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  52315163 tcacaaaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 53294078 - 53294029
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  53294078 acaaaactcatgtcagtagataagcacaaattagtcaatccaaacaggcc 53294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 8705045 - 8705093
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||||||  ||||||||||||||| || ||||||||||||    
T  8705045 tcacaaaacttatgtcaatagataagctcaaatgagccaatccaaacag 8705093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 17975287 - 17975255
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||||||||||||||||||||    
T  17975287 ggtagataagctcaaataagtcaatccaaacag 17975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 22662209 - 22662165
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||  |||||||| |||||||||||||||||||||||||||    
T  22662209 cttatgttagtagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 22666688 - 22666644
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||  |||||||| |||||||||||||||||||||||||||    
T  22666688 cttatgttagtagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 24169367 - 24169423
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||||||||| | |||||||| ||| |||||| ||||||||||| ||||||||    
T  24169367 tcacaaaacttatgccagtagataaactctaataagccaatccaaacaagcccttag 24169423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 29388720 - 29388768
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  29388720 acaaaacttatgttagtagataaggtcaaataagtcaacccaaacaggc 29388768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 35571596 - 35571544
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||   ||||||||||||||||||| |||||||||||| ||||    
T  35571596 cacaaaacttatgctagtagataagctcaaataagccaatccaaacagaccct 35571544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 49003844 - 49003800
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatc 169  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||    
T  49003844 gtttcacaaaacttacgtcagtggataagctcaaataagtcaatc 49003800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 49940133 - 49940085
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||  | || |||||||||||||||||||||||||||    
T  49940133 tcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaacag 49940085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 825446 - 825407
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  825446 ttatgtaggtatataagctcaaataagtcaatccaaacag 825407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 3639126 - 3639079
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||||||||||||||  |||||||| | |||||||    
T  3639126 cttatgtcggtagataagctcaaataagcaaatccaaatatgccctta 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 21953395 - 21953430
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21953395 tagataagctcaaataagtcaatccaaacagaccct 21953430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 29657488 - 29657527
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaa 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  29657488 tcacaaaacttgtgttggtagataagctcaaataagtcaa 29657527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 181
Target Start/End: Complemental strand, 54581097 - 54581066
Alignment:
Q  150 taagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||||||||||||||||    
T  54581097 taagctcaaataagtcaatccaaacaggccct 54581066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 2244137 - 2244203
Alignment:
Q  110 aaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||| |||  |||||| |||||||||||| |||||||| |||  |||| |||||||||||||    
T  2244137 aaattctcccaaacagtttcaaaaaacttatgtcagtagataaactcggataaatcaatccaaacag 2244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 23319972 - 23320010
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  23319972 gtagataatctcaaataagccaatccaaacaggccctta 23320010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 26829 - 26780
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||| |||||| | || |||||||||||||||| |||||||||||||||    
T  26829 acaaagcttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 16494752 - 16494719
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||| |||||||||||||||||||||||||||||    
T  16494752 ataaactcaaataagtcaatccaaacaggccctt 16494719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 25904189 - 25904132
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||| |||||||  | |||||||||||||||||||| | |||||||||| ||||    
T  25904189 tcacaaaatttatgtcattggataagctcaaataagtcaaccaaaacaggcccctaga 25904132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 41512743 - 41512800
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||||||| | |  ||||||  ||||||||||| ||||||||||||||||||||    
T  41512743 tcacaaaacttaagccattagatacactcaaataagttaatccaaacaggcccttaga 41512800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 53315450 - 53315483
Alignment:
Q  148 gataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||||||||||||| ||||    
T  53315450 gataagctcaaataagtcaatccaaacagaccct 53315483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 1408061 - 1408105
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaa 172  Q
    ||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1408061 tcacaaaacttgtgtatgtagataagctcaaataagccaatccaa 1408105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 7368003 - 7367967
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  7368003 gtagataaactcaaataagtcaatccaaacagaccct 7367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 13126542 - 13126494
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||  |||| |||||| ||||||| ||||||||||||    
T  13126542 tcacaaaacttatgttagtaggtaagctaaaataagccaatccaaacag 13126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 20656150 - 20656198
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||| | |||||||||||||||||| ||||| |||| |||||||||    
T  20656150 acttatgacagtagataagctcaaataaatcaattcaaataggccctta 20656198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 24193655 - 24193683
Alignment:
Q  147 agataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||    
T  24193655 agataagctcaaataagtcaatccaaaca 24193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 25309313 - 25309349
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  25309313 gtagataagttcaaataagtcaatccaaacagaccct 25309349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 38336859 - 38336815
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||  | |||||||||||||||||||||| ||||||    
T  38336859 aaaacttatgtcaatggataagctcaaataagtcaatcaaaacag 38336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 53034757 - 53034713
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||| || ||||||||||||||||||||||| ||||||| ||||    
T  53034757 cttatatcagtagataagctcaaataagtcaaaccaaacaagccc 53034713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 54726566 - 54726534
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||| ||||||||||||||||||    
T  54726566 ataagctcaaataaatcaatccaaacaggccct 54726534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 27317454 - 27317533
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||| ||| |||||  |||  || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27317454 gttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 4607000 - 4607082
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||  || |||||| |||| || ||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  4607000 gttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaacaggccct 4607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 15305775 - 15305831
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  15305775 gtttcacaaaacttatgtcaatagataagctcaaataagccaatccaaacaggccct 15305831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 30331830 - 30331908
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| ||| |||||| |||  || |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaacaagccct 30331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 18179024 - 18179101
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||| |||||   |  ||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  18179024 gttgttttcgtaagttctcttgagcggtctcacaaaacttatgttagtagataagctcaaataagtcaatccaaacag 18179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 3312181 - 3312237
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||    
T  3312181 tcacaaaacttacgtcagtagataagctcaaataagccaatccaaacaagcccttag 3312237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 7928264 - 7928208
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  7928264 tcacacaacttatgtcaatagataagctcaaataagccaatccaaacaggcccttag 7928208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 31744406 - 31744458
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  31744406 aaaacttatgtcggtagataagcccaaataagccaatccaaacaggcctttag 31744458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 42419870 - 42419948
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||||| |||||| |||  || ||| |||||||||||| | |||||| |||||||||||||||||||| |||||    
T  42419870 tgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaaaaggcc 42419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 10619186 - 10619133
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||    
T  10619186 tcacaaaacttgtgtcagtagataaactcaaatgagtcaatccaaacaggccct 10619133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 26202132 - 26202185
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  26202132 tcacaaaacttatgtcagcagataagttcaaataagttaatccaaacaggccct 26202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 2416414 - 2416470
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||  |||||||| |||||||||||||||| ||||| |||||    
T  2416414 gtttcacaaaacttatgttagtagataaactcaaataagtcaatctaaacatgccct 2416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 15370281 - 15370238
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  15370281 cttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 28803488 - 28803445
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  28803488 cttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 10563510 - 10563472
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  10563510 ggtagataagttcaaataagtcaatccaaacaggccctt 10563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 28810400 - 28810362
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  28810400 tagagaagctcaaataagtcaatccaaacaggcccttag 28810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 1830151 - 1830196
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||    
T  1830151 cttatgtcagtaaataaactcaaataagtcaatccaaacaggccct 1830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 44119866 - 44119935
Alignment:
Q  108 gtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||  |||  ||||||||||||||||||| | |  |||||||||||||| |||||||||||||    
T  44119866 gtaaattctctcaaacagtttcacaaaacttatgtcagcatgtaagctcaaataagccaatccaaacagg 44119935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 3078558 - 3078526
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||||||||||||||||||||    
T  3078558 ggtagataagctcaaataagtcaatccaaacag 3078526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 6772482 - 6772446
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6772482 gtagataagctcaaataagtcaatccaaacatgccct 6772446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 9996862 - 9996898
Alignment:
Q  148 gataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9996862 gataagctcaaataagtcaagccaaacaggcccttag 9996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 44438798 - 44438754
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||    
T  44438798 ttatgtctgtagataagctcaaatcagtcaattcaaacaggccct 44438754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 2790359 - 2790398
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  2790359 gtagataagttcaaataagccaatccaaacaggcccttag 2790398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 22878210 - 22878249
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  22878210 cttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 26143635 - 26143559
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||||| |||||| |||  || |||  ||| ||||||| ||||||||||||||| ||| |||||||||||||    
T  26143635 gttgttttcgtaagttctcccaaacagtctca--aaatttatgtcagtagataagctcaaacaagccaatccaaacagg 26143559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 26548564 - 26548607
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||    
T  26548564 acttatgtcggtagataagctcaaataagccaatcaaaagaggc 26548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 31561711 - 31561664
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaa 172  Q
    |||| |||||||||||||  |||||||| |||||||||||||||||||    
T  31561711 gttttacaaaacttatgttagtagataatctcaaataagtcaatccaa 31561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 40759272 - 40759315
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||  |||||||||||||||||| |||||||||||||||    
T  40759272 cttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 42868429 - 42868394
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||| |||||||||||||||||    
T  42868429 tagataagctcaaataaggcaatccaaacaggccct 42868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 750856 - 750886
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||||||||||||||||||    
T  750856 tagataagctcaaataagtcaatccaaacag 750886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 18525198 - 18525160
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  18525198 ttatgtctgtagataagctcaaataagtcaattcaaaca 18525160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 20952432 - 20952506
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||| ||| |||||  |||| || | ||||||||| || | ||| |||||||||||||||||||||||||||    
T  20952432 tgttttcataagttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataagtcaatccaaaca 20952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 37448727 - 37448693
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||||||||||||||||||||||||| ||||||||    
T  37448727 ggtagataagctcaaataagtcaatctaaacaggc 37448693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 39659475 - 39659425
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||| ||||||||||| ||||||||||||||  ||| ||||||||||||||    
T  39659475 tcacgaaacttatgtcagtagataagctcaagcaagccaatccaaacaggc 39659425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 40837394 - 40837356
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  40837394 ttatgtcagtagataagctcaaataagccaatccaaaca 40837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 44590128 - 44590178
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||||||||||  ||||||| |||||||||| ||||||||| ||||    
T  44590128 tcacaaaacttatgtctatagataaactcaaataagccaatccaaagaggc 44590178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 35809979 - 35810012
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatc 169  Q
    |||||| |||||||||||||||||||||||||||    
T  35809979 cttatgccggtagataagctcaaataagtcaatc 35810012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 40059418 - 40059381
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaac 40059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 40085318 - 40085281
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaac 40085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 42659177 - 42659128
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||||||||| | ||| ||||||||||||||| ||| |||||||||    
T  42659177 tcacaaaacttatgccagtaaataagctcaaataagccaacccaaacagg 42659128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 2142730 - 2142806
Alignment:
Q  100 ttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| ||| |||||| |||  || ||| ||||||||||   |||||||| |||||||||||||| ||||||||    
T  2142730 ttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaacag 2142806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 2964766 - 2964722
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||    
T  2964766 ttatgccggtagataagttcaaataagttaatccaaacatgccct 2964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 3070168 - 3070136
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||||||||| |||||||||||||    
T  3070168 ggtagataagctcaaataaatcaatccaaacag 3070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 8017546 - 8017586
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||  ||||||| |||||||||||||||||||||||    
T  8017546 cttatgtcaatagataacctcaaataagtcaatccaaacag 8017586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 11307425 - 11307457
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||| ||||||||||||    
T  11307425 ataagctcaaataagtcaattcaaacaggccct 11307457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 16398193 - 16398240
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||||||||    
T  16398193 tcacaaaacttttgtcagtaaataag-tcaaataagtcaatccaaacag 16398240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 25790236 - 25790280
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||| || |||||||||||||||| |||| |||||||||||    
T  25790236 cttatgtctgttgataagctcaaataagccaattcaaacaggccc 25790280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 27317073 - 27317025
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||| |||||| |  |||||||||| ||||||||||||||||||||    
T  27317073 tcacaaagcttatgccaatagataagctaaaataagtcaatccaaacag 27317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 30990397 - 30990357
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||  ||||||||||||||||||| ||||||||||||    
T  30990397 cttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 32821929 - 32821961
Alignment:
Q  144 ggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||||||||||||| ||||||    
T  32821929 ggtagataagctcaaataagtcaatctaaacag 32821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 2295280 - 2295350
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||| |||| || ||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  2295280 ttctcccaaatagtctcagaaaacttaagtcagtagataagctcaaataagccaatccaaacaggccctta 2295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 39976179 - 39976122
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||    
T  39976179 gtttcacaaaacttatgtcagtagataatctcaaataagtcagtccaaactggccctt 39976122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 50644250 - 50644174
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||||| ||| |||||| |||  || ||||||||| |||||  |||||||||||||||||||||||||||||||    
T  50644250 gttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 14385774 - 14385707
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||||| || |||| ||||||||| | ||||||||||||||||||| |||||| |||||||||    
T  14385774 ttctccaaaatagtctcacgaaacttatgccagtagataagctcaaataagccaatccgaacaggccc 14385707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 36872806 - 36872885
Alignment:
Q  102 gttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||| ||||||||||||||  || || |||||||||||| | ||| |||||| ||||||| |||||||||||||||||    
T  36872806 gttttcataaattctccaaaacagtctcgcaaaacttatgttgttagttaagcttaaataagccaatccaaacaggccct 36872885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 2295173 - 2295251
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||| ||| |||||| |||  || |||||||||||||| | ||||||||||||||||||| |||| ||||||||||    
T  2295173 tgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaacaggcc 2295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 24334280 - 24334345
Alignment:
Q  109 taaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    |||||||||  |||| || |||||||||||||||| || ||||| |||||||||||||||||||||    
T  24334280 taaattctctcaaatagtctcacaaaacttatgtccgttgataaactcaaataagtcaatccaaac 24334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 33204360 - 33204312
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  33204360 tcacaaaacttatgtcagtagataagctcaaataagtcgatctaaacag 33204312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 38116058 - 38116002
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatc 169  Q
    ||||||||||  || |||||||||||| ||| |||||||||||||||||||||||||    
T  38116058 ttctccaaaaccgtctcacaaaacttacgtcagtagataagctcaaataagtcaatc 38116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 6292604 - 6292643
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6292604 cttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10199366 - 10199319
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||    
T  10199366 cttatgttagtagataagctcaaataagtcaatccaaccaggccctta 10199319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 15477657 - 15477712
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||   |||||||||||| |||||| |||||||||||||||||||    
T  15477657 tcacaaaacttatgcaagtagataagctctaataagccaatccaaacaggccctta 15477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 41505784 - 41505831
Alignment:
Q  134 aacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  41505784 aacttatgtcagtagataagctcaaataagccaatccaaacaagccct 41505831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 24460356 - 24460314
Alignment:
Q  139 atgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||| ||||||||| |||||||||||||||||||||||||||    
T  24460356 atgtcagtagataagttcaaataagtcaatccaaacaggccct 24460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 1432619 - 1432664
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||    
T  1432619 tcacaaaatttatgtcggtggataagctcaaataagccaatccaaa 1432664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 3234010 - 3233933
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||| ||| ||||||  ||  || |||||||||||| | |  |||||||||||||||||||||||||||||||    
T  3234010 gttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaacag 3233933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 15784423 - 15784475
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||||  ||||||||||||||||||||| ||||||  ||||||||    
T  15784423 acaaaacttatgttagtagataagctcaaataagtcgatccaattaggccctt 15784475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 37473516 - 37473564
Alignment:
Q  133 aaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||| | |||||||| |||||||||| |||||||||||||||||    
T  37473516 aaacttatgcccgtagataatctcaaataagccaatccaaacaggccct 37473564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 38247432 - 38247484
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||| | ||||||||| ||||||||  |||||||||||||||||    
T  38247432 cacaaaacttatgccagtagataagttcaaataacccaatccaaacaggccct 38247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 473242 - 473317
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||| ||| |||||| |||  |||||||| |||||||| | ||||||| ||||||||||| ||||| ||||||||    
T  473242 ttttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaaataagccaatctaaacaggc 473317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 2194365 - 2194318
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||||||    
T  2194365 cttatgtcggtggataagctcaaataaatcaattcaaacacgccctta 2194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 7218031 - 7217988
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  7218031 ttatgccggtagataagcttaaataagtcaatccaaacatgccc 7217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 14576603 - 14576564
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  14576603 gtagataagctcaaataagccaatccaaacaggccattag 14576564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 27146221 - 27146174
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  27146221 tcacaaaacttatgccaatagataagctcaaatcagtcaatccaaaca 27146174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 37617458 - 37617375
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||| |||||||||  |||  || |||||||||||| | |  ||||||| |||||||||||||||||||||| | ||||||    
T  37617458 tgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaacatgaccttag 37617375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 3319895 - 3319865
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||||    
T  3319895 gtagataagctcaaataagtcaatccaaaca 3319865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 7028406 - 7028440
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataa 162  Q
    |||||||||||||||||| ||||||||||||||||    
T  7028406 tcacaaaacttatgtcggcagataagctcaaataa 7028440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 7069384 - 7069430
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||||||| ||  || ||||||||||||||||||||||||||||    
T  7069384 cacaaaacttacgttagttgataagctcaaataagtcaatccaaaca 7069430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 15558335 - 15558373
Alignment:
Q  148 gataagctcaaataagtcaatccaaacaggcccttagag 186  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  15558335 gataagctcaaataactcaatccaaacaggccctaagag 15558373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 17269373 - 17269407
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||| |||||||||||||||||||||||||||    
T  17269373 agataagttcaaataagtcaatccaaacaggccct 17269407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 38001672 - 38001754
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||| ||| |||||| |||  || |||||||||||||||| || ||||| ||||||||||   |||||| ||||||||||    
T  38001672 tgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataagcttatccaagcaggccctta 38001754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 7107493 - 7107448
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaa 158  Q
    |||||| |||| || |||||||||||||||| ||||||||||||||    
T  7107493 ttctcccaaatagtatcacaaaacttatgtcagtagataagctcaa 7107448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 13810102 - 13810151
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||||||||||| ||| |||||||||| |||||||| ||||||| |||||    
T  13810102 tcacaaaacttacgtcagtagataagcacaaataagccaatccatacagg 13810151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 21002276 - 21002313
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  21002276 gtagataagctcaaataagccaatccaaacaagccctt 21002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 34303215 - 34303178
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  34303215 cttatgtcggtagataagctcaaacaagtcaattcaaa 34303178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 34952324 - 34952361
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  34952324 tagataagctcaaataagccaatccaaacagaccctta 34952361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 51929420 - 51929383
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  51929420 cttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 3597229 - 3597193
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccctt 182  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  3597229 tagataacctcaaataagtcaatccaaacaggtcctt 3597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 3887575 - 3887543
Alignment:
Q  151 aagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||||||||||||| ||||||    
T  3887575 aagctcaaataagtcaatccaaacagaccctta 3887543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 5157185 - 5157221
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  5157185 ttatgtccgtagataagttcaaataagtcaatccaaa 5157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 5886939 - 5886911
Alignment:
Q  147 agataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||    
T  5886939 agataagctcaaataagtcaatccaaaca 5886911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 6102257 - 6102297
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaat 168  Q
    |||||||| ||||| |||||||||| |||||||||||||||    
T  6102257 tcacaaaatttatgccggtagataaactcaaataagtcaat 6102297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 26866434 - 26866470
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  26866434 gtagataagctgaaataagtcaatccaaacagaccct 26866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 29793655 - 29793619
Alignment:
Q  137 ttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  29793655 ttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 32958749 - 32958789
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||| | ||||||||||||||||||||||||| ||||||    
T  32958749 cttatgacagtagataagctcaaataagtcaatctaaacag 32958789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 33723331 - 33723299
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||| |||||||||||||||||||||||    
T  33723331 gtagataagttcaaataagtcaatccaaacagg 33723299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 37241770 - 37241738
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||| |||||||||||||||||||||    
T  37241770 gtagataagcttaaataagtcaatccaaacagg 37241738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 21405120 - 21405067
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  21405120 tcacaaaacttatgtcagtatataagctcaaataagtcaatccaaacagaccct 21405067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 35069576 - 35069524
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  35069576 acaaaacttatgtcagtagataagctcaaataagccaatacaaacaggccctt 35069524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 2457053 - 2457096
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  2457053 cttatgtcggtagataatctcaaataagccaatccaaacaggcc 2457096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 24982794 - 24982864
Alignment:
Q  113 ttctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||  || |||||||||||||||  ||||||||| || ||| ||||||||||||||| ||||||    
T  24982794 ttctccaaaacagtctcacaaaacttatgttagtagataagatctaattagtcaatccaaacagtccctta 24982864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 848093 - 848145
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||| |  |||||||||||||||||| |||||||||||||||||    
T  848093 tcacaaaacttatg-ctatagataagctcaaataaggcaatccaaacaggccct 848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 30536924 - 30536879
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||    
T  30536924 acttatgtaagtagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 33027706 - 33027750
Alignment:
Q  138 tatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||    
T  33027706 tatgtcagtagataagctcaaataaatcaatccaaacatgccctt 33027750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 34404691 - 34404639
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||    
T  34404691 cacaaaacttatgtcagttgataaactcaaataagtaaatccaaacagcccct 34404639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 835226 - 835179
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||||    
T  835226 cacaaaacttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 2455334 - 2455397
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataa 162  Q
    ||||||||| ||| |||||  |||| ||||||| ||||||||||  ||||||||||||||||||    
T  2455334 gttgttttcataagttctctcaaatagtttcaccaaacttatgtttgtagataagctcaaataa 2455397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 4163261 - 4163304
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||| | ||||||||||||||||||| |||||||||||    
T  4163261 aaaacttatgccagtagataagctcaaataagccaatccaaaca 4163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 4224882 - 4224925
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||| | ||||||||||||||||||| |||||||||||    
T  4224882 aaaacttatgccagtagataagctcaaataagccaatccaaaca 4224925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 6536716 - 6536771
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    |||||||||||||||| |||| ||| ||||||||| | |||||||||| |||||||    
T  6536716 tcacaaaacttatgtcagtaggtaaactcaaataatttaatccaaacatgccctta 6536771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 9202934 - 9202903
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacag 176  Q
    ||||||||||||||||||||||||||||||||    
T  9202934 gtagataagctcaaataagtcaatccaaacag 9202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 180
Target Start/End: Original strand, 12111088 - 12111123
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12111088 gtagataagctcaaataagtcaatccaaataggccc 12111123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 33089582 - 33089657
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaa-acttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||| ||| |||||  |||| || ||||||| || |||||| ||||||||||||||||||||||| |||||||    
T  33089582 tgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataagtcaacccaaaca 33089657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 9604902 - 9604948
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||  ||||||||| ||||||||||||||| |||||||||||    
T  9604902 acttatgtgagtagataaggtcaaataagtcaatcgaaacaggccct 9604948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 18612411 - 18612457
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||||    
T  18612411 cacaaaacttatgtcggttgaaaagctcaaaaaagttaatccaaaca 18612457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 19800408 - 19800370
Alignment:
Q  143 cggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  19800408 cggtagataagctcaaataaatcaatccaaacaagccct 19800370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 29249518 - 29249552
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||||||||||||| |||||||    
T  29249518 ataagctcaaataagtcaatccaaacatgccctta 29249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 31776221 - 31776191
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||||    
T  31776221 gtagataagctcaaataagtcaatccaaaca 31776191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 32205962 - 32205928
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||| |||||||||||||||||||||||||    
T  32205962 gtagataaggtcaaataagtcaatccaaacaggcc 32205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 103555 - 103584
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||||||||||||||||||||||||    
T  103555 ataagctcaaataagtcaatccaaacaggc 103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 35071598 - 35071643
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||| | ||| ||||||| |||||||||||||||||    
T  35071598 tcacaaaacttatggcagtatataagctgaaataagtcaatccaaa 35071643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 507318 - 507354
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  507318 gtagataagctcaaacaagccaatccaaacaggccct 507354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 2455922 - 2455954
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaat 168  Q
    |||||| ||||||||||||||||||||||||||    
T  2455922 cttatgccggtagataagctcaaataagtcaat 2455954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 9202281 - 9202253
Alignment:
Q  148 gataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||||||||||||||||    
T  9202281 gataagctcaaataagtcaatccaaacag 9202253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 10452369 - 10452333
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  10452369 tagataagctcaaataagccaatccaaacatgccctt 10452333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 10645380 - 10645304
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||||||| ||| |||||| |||  || | ||||||||||||||  ||||||| ||||||| || |||||||||||    
T  10645380 gttgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaaca 10645304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 31624372 - 31624412
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| ||| ||||||||||||||| ||||||||||||    
T  31624372 cttatgtcagtatataagctcaaataagccaatccaaacag 31624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 33068560 - 33068520
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| ||||||||| ||||||||| ||||||||||||    
T  33068560 cttatgtcagtagataagttcaaataagccaatccaaacag 33068520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 35070620 - 35070568
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||| |||| || | |||| |||||||||||||| ||||||||||||||||    
T  35070620 tcacaagacttgtgccagtaggtaagctcaaataagccaatccaaacaggccc 35070568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 584123 - 584196
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||| ||||||||||||||  || ||||| ||||||||   ||||||||||||||||||||||||||||||    
T  584123 tgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 16073007 - 16072958
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16073007 tcacaaaacttatgtcattagataagctcaaataagtcaatccaaacagg 16072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 24085331 - 24085258
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    ||||||| ||| |||||||||   || |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  24085331 tgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 25447211 - 25447163
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  25447211 tcacaaaacttatgtcagtagataaactcaaataagtcaatccaaacag 25447163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 42799960 - 42799880
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataa-gctcaaataagtcaatccaaacaggccc 180  Q
    ||||||| ||| |||||| |||  |||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaacaggccc 42799880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 34610798 - 34610725
Alignment:
Q  102 gttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||| ||| |||||| |||| |||  |||||||||||||| ||||||||||||||||||||| || ||||||    
T  34610798 gttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataagtccatacaaaca 34610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 20170680 - 20170630
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    |||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  20170680 tcactaaacttatgtcactagataagctcaaataagccaatccaaacaggc 20170630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 51929863 - 51929897
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||||||||||||||||||||||||||||||    
T  51929863 tagataagctcaaataagtcaatccaaacaggccc 51929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 18405797 - 18405752
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||    
T  18405797 tcacaaaacttatgtcagtagataagctcaaataaaccaatccaaa 18405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 26911699 - 26911740
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  26911699 aaaacttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 26990181 - 26990144
Alignment:
Q  138 tatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||| |||||||||||||||||||||||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaaca 26990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 32663754 - 32663795
Alignment:
Q  140 tgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  32663754 tgtcggtagataagctcaaataagccaatccaaacagaccct 32663795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 33405155 - 33405114
Alignment:
Q  131 caaaacttatgtcggtagataagctcaaataagtcaatccaa 172  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  33405155 caaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 44014317 - 44014366
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||| ||| |||||||||| ||||||||||||||||| ||||||||||||    
T  44014317 cttaagtcagtagataagcccaaataagtcaatccaatcaggcccttaga 44014366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 47132397 - 47132475
Alignment:
Q  103 ttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||| ||| ||||||||||  || |||||||||||  | | ||||||||||||||||||| |||||||||||||| ||||    
T  47132397 ttttcataagttctccaaaacagtctcacaaaactt--gccagtagataagctcaaataagccaatccaaacaggctctta 47132475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 51929350 - 51929277
Alignment:
Q  101 tgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaac 174  Q
    |||||||  ||||||||  |||| || |||||||||||||| | ||| ||||| ||||||||||||||||||||    
T  51929350 tgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataaggtcaaataagtcaatccaaac 51929277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 1820079 - 1820043
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1820079 agataagctcaaataagccaatccaaacaggccctta 1820043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 9832724 - 9832672
Alignment:
Q  125 gtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 177  Q
    |||| ||||||||||||||  || ||||||||||||||||||||| |||||||    
T  9832724 gtttgacaaaacttatgtcaataaataagctcaaataagtcaatctaaacagg 9832672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 15304316 - 15304280
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggccctt 182  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15304316 tagataagctcaaataagtcaattcaaacaggccctt 15304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 45541696 - 45541732
Alignment:
Q  149 ataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    |||||||||||||||||||||||||||||| ||||||    
T  45541696 ataagctcaaataagtcaatccaaacaggctcttaga 45541732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 24684784 - 24684741
Alignment:
Q  132 aaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||| | |||||||||||||||||||| ||||||||||    
T  24684784 aaaacttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 42747777 - 42747698
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 178  Q
    ||||||||| ||| ||||| ||||  || |||||| |||||||   |||||||| |||||||||||||| ||||||||||    
T  42747777 gttgttttcataagttctcaaaaacagtctcacaatacttatggaagtagataaactcaaataagtcaaaccaaacaggc 42747698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 46478771 - 46478818
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  46478771 tcacaaaacttacgttagtagatatgctcaaataagtcaatccaaaca 46478818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 2100126 - 2100092
Alignment:
Q  147 agataagctcaaataagtcaatccaaacaggccct 181  Q
    |||||||||||||||||||||||||||||| ||||    
T  2100126 agataagctcaaataagtcaatccaaacagaccct 2100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 4534323 - 4534285
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  4534323 tagataagctcaaataaatcaatcgaaacaggcccttag 4534285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 27896126 - 27896088
Alignment:
Q  146 tagataagctcaaataagtcaatccaaacaggcccttag 184  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  27896126 tagataagttcaaataagccaatccaaacaggcccttag 27896088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 34235056 - 34235002
Alignment:
Q  131 caaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttaga 185  Q
    ||||||||||||  |||||||||||| ||||||||||| |||||| || ||||||    
T  34235056 caaaacttatgttagtagataagctcgaataagtcaatacaaacaagctcttaga 34235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 46407617 - 46407655
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||||||||||||||| || |||||||||    
T  46407617 acttatgtcggtagataagctcaaattagccaatccaaa 46407655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 46407863 - 46407893
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaaca 175  Q
    |||||||||||||||||||||||||||||||    
T  46407863 gtagataagctcaaataagtcaatccaaaca 46407893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 5448550 - 5448583
Alignment:
Q  130 acaaaacttatgtcggtagataagctcaaataag 163  Q
    |||||||||||||| |||||||||||||||||||    
T  5448550 acaaaacttatgtcagtagataagctcaaataag 5448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 39980833 - 39980886
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||||||||   ||||||||||||||| ||| |||||||||||| ||||    
T  39980833 tcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagaccct 39980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 49556968 - 49557029
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaggcccttagagtat 189  Q
    |||||||||||||| |  | |||||||||| ||||| ||||||||| ||||||| |||||||    
T  49556968 tcacaaaacttatgccacttgataagctcagataagccaatccaaataggccctaagagtat 49557029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 174
Target Start/End: Original strand, 20669471 - 20669499
Alignment:
Q  146 tagataagctcaaataagtcaatccaaac 174  Q
    |||||||||||||||||||||||||||||    
T  20669471 tagataagctcaaataagtcaatccaaac 20669499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 21367772 - 21367816
Alignment:
Q  129 cacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 173  Q
    |||||||||||||  ||||||||| |||||||||| |||||||||    
T  21367772 cacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 22203533 - 22203581
Alignment:
Q  128 tcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacag 176  Q
    |||||||| | |||||||||||||||||| |||| || |||||||||||    
T  22203533 tcacaaaattaatgtcggtagataagctcgaatatgttaatccaaacag 22203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 29114536 - 29114580
Alignment:
Q  135 acttatgtcggtagataagctcaaataagtcaatccaaacaggcc 179  Q
    ||||||||| ||||||||  ||||||||||||||| |||||||||    
T  29114536 acttatgtcagtagataaagtcaaataagtcaatcgaaacaggcc 29114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 30573872 - 30573829
Alignment:
Q  136 cttatgtcggtagataagctcaaataagtcaatccaaacaggccc 180  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  30573872 cttatgtcagtagata-gctcaaataagtccatccaaacaggccc 30573829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 31615515 - 31615479
Alignment:
Q  139 atgtcggtagataagctcaaataagtcaatccaaaca 175  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  31615515 atgtccgtagataaactcaaataagtcaatccaaaca 31615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 36769912 - 36769876
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccct 181  Q
    ||||||||  |||||||||||||||||||||||||||    
T  36769912 gtagataaaatcaaataagtcaatccaaacaggccct 36769876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 38902172 - 38902224
Alignment:
Q  131 caaaacttatgtcggtagataagctcaaataagtcaatccaaacaggccctta 183  Q
    ||||||||||| | |||||||||||||||| || |||| |||||||| |||||    
T  38902172 caaaacttatgccagtagataagctcaaatgaggcaattcaaacaggtcctta 38902224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 45432909 - 45432865
Alignment:
Q  138 tatgtcggtagataagctcaaataagtcaatccaaacaggccctt 182  Q
    |||||| ||||||||| | |||||||||||||||||||| |||||    
T  45432909 tatgtcagtagataagttaaaataagtcaatccaaacagaccctt 45432865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 46778186 - 46778122
Alignment:
Q  99 gttgttttcgtaaattctccaaaatggtttcacaaaacttatgtcggtagataagctcaaataag 163  Q
    ||||||||| ||| |||||| ||| |||||||||||| ||||| |  || |||||||||||||||    
T  46778186 gttgttttcataagttctcccaaacggtttcacaaaatttatgccactaaataagctcaaataag 46778122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 49845485 - 49845457
Alignment:
Q  149 ataagctcaaataagtcaatccaaacagg 177  Q
    |||||||||||||||||||||||||||||    
T  49845485 ataagctcaaataagtcaatccaaacagg 49845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 159922 - 159887
Alignment:
Q  145 gtagataagctcaaataagtcaatccaaacaggccc 180  Q
    ||||||||||||||||||| ||||||||||||||||    
T  159922 gtagataagctcaaataagccaatccaaacaggccc 159887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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