View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2867_low_17 (Length: 239)
Name: NF2867_low_17
Description: NF2867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2867_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39616849 - 39616628
Alignment:
| Q |
1 |
ctctctgccttttgtctttttatagcgcaccctcactcccatcccattttcactgcaattctaaagtttctcttcatttcttctattccttatcagtgcc |
100 |
Q |
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| T |
39616849 |
ctctctgccttttgtctttttatagcgcaccctcactcccatcccattttcactgcaattctaaagtttctcttcatttcttctattccttatcagtgcc |
39616750 |
T |
|
| Q |
101 |
agttactgcattaacaaaaattctagttcttcaattgtgtattctaattatgcaatttcacaccccaatttgttcttcggctttaggagcagagtttgaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
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| T |
39616749 |
agttactgcattaacaaaaactctagttcttcaattgtgtattctaattatgcaatttcacaccccaatttgttcttcagctttagcagcagagtttgaa |
39616650 |
T |
|
| Q |
201 |
gaagccaaacagaggagtaaat |
222 |
Q |
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|||||||||||||| ||||||| |
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| T |
39616649 |
gaagccaaacagagtagtaaat |
39616628 |
T |
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