View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2867_low_8 (Length: 348)
Name: NF2867_low_8
Description: NF2867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2867_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 6950465 - 6950796
Alignment:
| Q |
1 |
atccttagtattgggccttactaagtaagtggattgttaccttttgtattttacgatagcaatttatgtagaatacttggtgtttaggtacctttctttt |
100 |
Q |
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| T |
6950465 |
atccttagtattgggccttactaagtaagtggattgttaccttttgtattttacgatagcaatttatgtagaatacttggtgtttaggtacctttctttt |
6950564 |
T |
|
| Q |
101 |
cttttttcagagttcgaagattgaatctgcgagggacagccccgtcacacctcctctaaccaaagagcgcctgccccgtcatttgcaccacccaatgaca |
200 |
Q |
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| T |
6950565 |
cttttttcagagttcgaagattgaatctgcgagggacagccccgtcacacctcctctaaccaaagagcgcctgccccgtcatttgcaccacccaatgaca |
6950664 |
T |
|
| Q |
201 |
atgggctactcctcatcagattcactggatcaccaccatatgcaacctcaaccttgctatgaaacaagtggtctgccatcaaaatctaatctttccaaca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6950665 |
atgggctactcctcatcagattcactggatcaccaccatatgcaacctcaaccttgctatgaaacaagtggtctgccatcaaaatctaatctttccaaca |
6950764 |
T |
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| Q |
301 |
ttggtgtgccaaagactgaaagatcatccatt |
332 |
Q |
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|||||||||||||||| ||||||||||||||| |
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| T |
6950765 |
ttggtgtgccaaagaccgaaagatcatccatt |
6950796 |
T |
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