View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2869_low_5 (Length: 310)
Name: NF2869_low_5
Description: NF2869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2869_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 229817 - 229539
Alignment:
| Q |
16 |
gatgatgtaagttcacttctctctacttgatccctatttattattagcttttaatattggacttaacacattccttacaaaatcaacgtttaccatgtca |
115 |
Q |
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| T |
229817 |
gatgatgtaagttcacttctctctacttgatcactatttattattagcttttaatattggacttaacatat-ccttacaaaatcaacgtttaccatgtca |
229719 |
T |
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| Q |
116 |
tattaatattttttatattagatctaactcattatttataaatcggtatataacatgatgcgatgcgtgcatctctttgtaaaggtcttggtattttcaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
229718 |
tattaatattttttatattagatctaactcattatttataaatcggtatataacatgatgcgatgcgtgcatctctttgtaaaggtcttggtattttcaa |
229619 |
T |
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| Q |
216 |
tactaataaggttgatccccatatcatacacaaccctttagtttgactcatatcaaagctttatttcgagatcaaatatt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
229618 |
tactaataaggttgatccccatatcatacacaaccctttagtttgactcatatcaaagctttatttcgagatcaaatatt |
229539 |
T |
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