View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2872_low_12 (Length: 254)
Name: NF2872_low_12
Description: NF2872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2872_low_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 39957430 - 39957185
Alignment:
| Q |
9 |
gaagaaaatgaaacaattgctacattggcatgattcaaattctaaaatccatagcgtgtttgttggatttagattttataattcgaacttgataattttg |
108 |
Q |
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| T |
39957430 |
gaagaatatgaaacaattgctacattggcatgattcaaattctaaaatccatagcgtgtttgttggatttagattttataattcgaacttgataattttg |
39957331 |
T |
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| Q |
109 |
ttaaaaaaggaggtgaattaacagaggaagagttcaaaaggcattatgcatttgaattctagaattcaaaatctcaaaaacacgctacaaattctagagt |
208 |
Q |
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| T |
39957330 |
ttaaaaaacgaggtgaattaacagaggaagagttcaaaaggcatgatgcatttgaattctagaattcaaaatctcaaaaacacgctacaaattctagagt |
39957231 |
T |
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| Q |
209 |
ttgaataaatataaaattgaaaaaacatagggcacgtgcgaggctt |
254 |
Q |
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| T |
39957230 |
ttgaataaatataaaattgaaaaaacatagggcacgtgcgaggctt |
39957185 |
T |
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