View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2874_low_12 (Length: 264)
Name: NF2874_low_12
Description: NF2874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2874_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 253
Target Start/End: Original strand, 47586380 - 47586626
Alignment:
| Q |
7 |
aatactctccaaaatttactaaaagaattcgactatgattatcattacatttaataatgatgatttatctacacttttctttgctatgtttgagaaggct |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
47586380 |
aatactctccaaaatttactaaaagaattcgactatgattatcattacatttaataataatgatttatctacacttttctttgctatgtttgagaaggct |
47586479 |
T |
|
| Q |
107 |
cgtaattgcaagatcaaaatggtgagctagctagagtagagtgataacagtcatgctgatctgtattttttggtgttggcatgtgtggacacaacacaag |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
47586480 |
cgtaattgcaagatcaaaatggtgagctagctagagtagagtgataacagtcatgctgatctgtattttttagtgttggcatgtgtggacacaacacaag |
47586579 |
T |
|
| Q |
207 |
aatgaaatagcaccagaatcttaataatcacacgagtgtcatctcat |
253 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
47586580 |
aatgaaatagcatcagaatcttaataatcacacgagtgtcatctcat |
47586626 |
T |
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