View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2875_high_30 (Length: 300)

Name: NF2875_high_30
Description: NF2875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2875_high_30
NF2875_high_30
[»] chr7 (24 HSPs)
chr7 (2-281)||(18873141-18873420)
chr7 (2-276)||(15167956-15168230)
chr7 (2-272)||(10895795-10896065)
chr7 (2-280)||(14422766-14423043)
chr7 (3-287)||(12709833-12710117)
chr7 (3-287)||(13122904-13123188)
chr7 (2-276)||(16009359-16009631)
chr7 (3-287)||(13743492-13743774)
chr7 (68-287)||(12590633-12590850)
chr7 (68-287)||(13007281-13007497)
chr7 (80-274)||(16677152-16677348)
chr7 (80-274)||(17651388-17651584)
chr7 (221-287)||(21230949-21231015)
chr7 (221-276)||(11382871-11382926)
chr7 (221-276)||(11389348-11389403)
chr7 (221-287)||(20311039-20311107)
chr7 (157-276)||(13679428-13679548)
chr7 (222-277)||(2971254-2971309)
chr7 (222-277)||(20906461-20906516)
chr7 (222-276)||(11311059-11311113)
chr7 (241-282)||(831628-831669)
chr7 (241-282)||(1196808-1196849)
chr7 (241-282)||(34958578-34958619)
chr7 (220-276)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (2-281)||(22750922-22751201)
chr5 (2-288)||(38144525-38144809)
chr5 (2-276)||(28370055-28370327)
chr5 (2-276)||(19512168-19512441)
chr5 (68-281)||(23528479-23528690)
chr5 (212-276)||(18407944-18408008)
chr5 (221-287)||(22438736-22438803)
chr5 (212-276)||(23111200-23111264)
chr5 (222-277)||(19236900-19236955)
chr5 (162-288)||(34830024-34830150)
chr5 (221-288)||(42961566-42961633)
chr5 (224-277)||(22461158-22461211)
chr5 (224-277)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (2-276)||(14762758-14763032)
chr3 (2-274)||(38310802-38311074)
chr3 (2-274)||(20247791-20248055)
chr3 (10-274)||(24192744-24193009)
chr3 (2-276)||(9534110-9534382)
chr3 (2-277)||(23370505-23370779)
chr3 (10-274)||(55499104-55499368)
chr3 (3-277)||(24933828-24934100)
chr3 (68-287)||(41455087-41455304)
chr3 (108-287)||(16801457-16801635)
chr3 (215-276)||(18929239-18929300)
chr3 (212-276)||(17240513-17240577)
chr3 (17-277)||(10389443-10389702)
chr3 (222-277)||(13302240-13302295)
chr3 (222-277)||(13323787-13323842)
chr3 (163-277)||(10414532-10414646)
chr3 (163-277)||(10421202-10421316)
chr3 (222-277)||(12033444-12033499)
chr3 (222-277)||(13312896-13312951)
chr3 (222-277)||(17131732-17131787)
chr3 (222-277)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (2-287)||(11840-12125)
scaffold0026 (2-277)||(111468-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (2-284)||(960-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (2-284)||(49961-50241)
[»] chr4 (12 HSPs)
chr4 (3-287)||(8045822-8046105)
chr4 (2-287)||(11847888-11848179)
chr4 (88-277)||(53483573-53483760)
chr4 (221-287)||(15408139-15408205)
chr4 (87-277)||(27906130-27906321)
chr4 (220-276)||(8834895-8834951)
chr4 (220-276)||(13888641-13888697)
chr4 (193-274)||(14486632-14486713)
chr4 (220-276)||(15245215-15245271)
chr4 (220-271)||(22724691-22724742)
chr4 (241-282)||(15747551-15747592)
chr4 (220-276)||(15308120-15308176)
[»] chr6 (23 HSPs)
chr6 (43-276)||(23057760-23057993)
chr6 (2-287)||(29614136-29614421)
chr6 (2-276)||(23838980-23839253)
chr6 (2-287)||(10986170-10986454)
chr6 (2-276)||(4477639-4477912)
chr6 (16-287)||(18800233-18800503)
chr6 (10-274)||(21565214-21565477)
chr6 (142-287)||(930085-930229)
chr6 (68-287)||(12168212-12168428)
chr6 (68-287)||(19287121-19287337)
chr6 (68-287)||(19785859-19786075)
chr6 (68-287)||(19878305-19878521)
chr6 (68-287)||(19884081-19884297)
chr6 (88-277)||(34639986-34640173)
chr6 (88-277)||(34646660-34646847)
chr6 (163-277)||(25469704-25469816)
chr6 (221-287)||(24512833-24512899)
chr6 (80-276)||(9187352-9187550)
chr6 (220-276)||(25397172-25397228)
chr6 (220-276)||(19471335-19471391)
chr6 (220-276)||(25348486-25348542)
chr6 (193-277)||(31252394-31252478)
chr6 (220-274)||(25598643-25598697)
[»] chr8 (15 HSPs)
chr8 (2-274)||(8727735-8728007)
chr8 (2-277)||(44477405-44477678)
chr8 (2-277)||(44492563-44492836)
chr8 (3-287)||(23866396-23866680)
chr8 (2-185)||(27940946-27941127)
chr8 (68-287)||(17054440-17054656)
chr8 (167-276)||(18614217-18614327)
chr8 (212-276)||(23482053-23482117)
chr8 (221-287)||(14056553-14056619)
chr8 (220-276)||(39364919-39364975)
chr8 (221-287)||(25111976-25112042)
chr8 (222-276)||(29643386-29643440)
chr8 (222-277)||(24320670-24320725)
chr8 (221-288)||(27940840-27940907)
chr8 (220-276)||(21931696-21931752)
[»] scaffold0924 (1 HSPs)
scaffold0924 (2-287)||(740-1025)
[»] chr2 (17 HSPs)
chr2 (2-276)||(19661454-19661726)
chr2 (2-276)||(6483500-6483772)
chr2 (2-276)||(6486967-6487239)
chr2 (10-287)||(26583617-26583892)
chr2 (10-274)||(23089057-23089320)
chr2 (10-274)||(23878798-23879060)
chr2 (16-276)||(23101463-23101722)
chr2 (163-277)||(5706023-5706137)
chr2 (212-276)||(23265133-23265197)
chr2 (212-276)||(23280201-23280265)
chr2 (215-276)||(21908353-21908414)
chr2 (220-276)||(24661576-24661632)
chr2 (222-277)||(10577-10632)
chr2 (96-287)||(23168288-23168483)
chr2 (96-287)||(23579545-23579740)
chr2 (222-277)||(25180929-25180984)
chr2 (205-286)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (2-274)||(14398-14670)
[»] scaffold0029 (2 HSPs)
scaffold0029 (68-287)||(111728-111948)
scaffold0029 (2-47)||(111682-111727)
[»] chr1 (12 HSPs)
chr1 (2-276)||(20437024-20437297)
chr1 (68-287)||(41111884-41112100)
chr1 (212-276)||(32651563-32651627)
chr1 (221-276)||(19663517-19663572)
chr1 (212-276)||(18712790-18712854)
chr1 (220-276)||(20805320-20805376)
chr1 (221-276)||(11158093-11158148)
chr1 (220-274)||(10811785-10811839)
chr1 (222-277)||(20851132-20851187)
chr1 (222-277)||(20857759-20857814)
chr1 (222-277)||(21706276-21706331)
chr1 (222-277)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (2-277)||(10195-10469)
[»] scaffold0544 (1 HSPs)
scaffold0544 (2-277)||(1525-1799)
[»] scaffold0117 (2 HSPs)
scaffold0117 (2-287)||(1887-2171)
scaffold0117 (2-287)||(8564-8848)
[»] scaffold0247 (1 HSPs)
scaffold0247 (10-287)||(11131-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (3-287)||(75-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (2-288)||(17950-18236)
[»] scaffold0476 (1 HSPs)
scaffold0476 (10-274)||(3295-3559)
[»] scaffold0154 (1 HSPs)
scaffold0154 (80-287)||(30715-30923)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-274)||(3624-3881)
[»] scaffold0634 (1 HSPs)
scaffold0634 (2-117)||(3443-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (86-282)||(1727-1920)
scaffold0796 (86-282)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (194-281)||(904-991)
scaffold0456 (194-281)||(8049-8136)
scaffold0456 (37-133)||(806-901)
scaffold0456 (37-133)||(7951-8046)
[»] scaffold0129 (1 HSPs)
scaffold0129 (165-283)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (221-287)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (212-276)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (212-276)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (221-287)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (221-276)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (221-287)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (212-276)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (223-287)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (212-276)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (212-276)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (225-287)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (87-287)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (188-287)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (193-277)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (157-276)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (220-276)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (255-290)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (221-276)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (205-286)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (220-280)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (87-274)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (222-277)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (222-277)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (222-277)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (222-276)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (193-277)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (220-276)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (262-290)||(80293-80321)
scaffold0003 (262-290)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 2 - 281
Target Start/End: Original strand, 18873141 - 18873420
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  18873141 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 18873240  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873241 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 18873340  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873341 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 15167956 - 15168230
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  15167956 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 15168055  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168056 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 15168155  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168156 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 10896065 - 10895795
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  10896065 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 10895966  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  10895965 taagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttc 10895867  T
Q  202 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttac 272  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10895866 caaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 280
Target Start/End: Original strand, 14422766 - 14423043
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  14422766 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 14422864  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14422865 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 14422963  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 280  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14422964 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 12710117 - 12709833
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  12710117 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 12710019  T
Q  102 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 200  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  12710018 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 12709919  T
Q  201 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709918 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 13123188 - 13122904
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  13123188 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 13123090  T
Q  102 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 200  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  13123089 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 13122990  T
Q  201 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122989 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 16009359 - 16009631
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  ||||||    
T  16009359 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagat 16009457  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| ||||||||||||    
T  16009458 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttc 16009556  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16009557 caaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

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Target: chr7; HSP #8
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 13743492 - 13743774
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 102  Q
    ||||||| |||  ||| |||||||| |||||   ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| ||||||||||    
T  13743492 caacaatcacatatcactccaccattatacaattattcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagatt 13743590  T
Q  103 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 202  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  13743591 aagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttcc 13743690  T
Q  203 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743691 aaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 80 - 274
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  80 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 179  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  180 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 80 - 274
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  80 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 179  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  180 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 21231015 - 21230949
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 21230949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaa 287  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  157 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 255  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  256 gatagtctcacccttacctta 276  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  241 ttatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  241 ttatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  241 ttatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 2 - 281
Target Start/End: Original strand, 22750922 - 22751201
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  22750922 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 22751021  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751022 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 22751121  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751122 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 288
Target Start/End: Complemental strand, 38144809 - 38144525
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  ||||||    
T  38144809 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagat 38144711  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  38144710 taagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 38144612  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 288  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144611 caaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 38144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 28370327 - 28370055
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  28370327 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 28370229  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  28370228 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 28370130  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370129 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 19512168 - 19512441
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  19512168 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 19512266  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  19512267 taagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttc 19512365  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512366 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  267 ccttaccttagtttt 281  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 287  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  162 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 260  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  261 tctcacccttaccttagttttgcagaat 288  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 42961566 - 42961633
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 288  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 42961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  224 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  224 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 14763032 - 14762758
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  14763032 acaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 14762933  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762932 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14762833  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762832 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 38311074 - 38310802
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  38311074 acaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 38310975  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310974 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 38310875  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310874 caaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 20248055 - 20247791
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||        ||||| ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  20248055 acaacaattacagatcattccaccatcatacacaaattcatc--------caatcactcataattttcaatcaatttatgatcacagcagcaacaaagat 20247964  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247963 taagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 20247864  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20247863 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 24192744 - 24193009
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttt 108  Q
    ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||    
T  24192744 tacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttt 24192842  T
Q  109 tcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaac 207  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24192843 tcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaac 24192942  T
Q  208 tatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24192943 tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 9534110 - 9534382
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  ||||||    
T  9534110 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagat 9534208  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| |||    
T  9534209 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttc 9534307  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9534308 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 277
Target Start/End: Complemental strand, 23370779 - 23370505
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  23370779 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 23370681  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  23370680 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 23370582  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23370581 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 55499368 - 55499104
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || || ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||    
T  55499368 tacagatcattccaccatcatacaaaacttgatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagattt 55499270  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 208  Q
    ||||| |||||| | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   |    
T  55499269 cattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 55499172  T
Q  209 atgcaattaggtcaatttt-cagaaattatagattat-gattatcgagagatagtctcacccttacct 274  Q
    | ||| ||||||||||||| | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  55499171 aagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 277
Target Start/End: Complemental strand, 24934100 - 24933828
Alignment:
Q  3 caacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacataga 100  Q
    ||||||||||||  |||||| ||||||||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| ||    
T  24934100 caacaattacagaatcattctaccatcatacaaatattcatcaattcatacaatacatcaaaaat-tcaatcaattaatggattgcagcaacaacatgga 24934002  T
Q  101 ttaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 200  Q
    ||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||  |||| ||    
T  24934001 ttaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattatttt 24933904  T
Q  201 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933903 ccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 16801635 - 16801457
Alignment:
Q  108 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 206  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  207 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  215 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 10389702 - 10389443
Alignment:
Q  17 cattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattct 115  Q
    ||||| |||| |||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| | ||||| |||||||||    
T  10389702 cattctaccaacatacaaatattcatcaattcatacaattcatcaaaaat-tcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T
Q  116 gaacattatattacaacagaat-taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaa 214  Q
     ||| ||| ||| | | | ||  |||||| ||  |||||||||  || |||||||||||||||||||||||   |||  ||||  |  |||||||| |||    
T  10389603 taacgttaaattccgagaaaaactaacatcatctttacccatt--ccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaa 10389506  T
Q  215 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    |||| | | ||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  10389505 ttagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  163 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 262  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  263 tcacccttaccttag 277  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  163 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 262  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  263 tcacccttaccttag 277  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 238; Significance: 1e-132; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 12125 - 11840
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||    
T  12125 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagat 12026  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  12025 taagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttc 11926  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11925 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 111468 - 111741
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  111468 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 111566  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  111567 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc 111665  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111666 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 2 - 284
Target Start/End: Original strand, 960 - 1240
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  960 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agat 1058  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  1059 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 1158  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 284  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1159 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 2 - 284
Target Start/End: Original strand, 49961 - 50241
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  49961 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agat 50059  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  50060 taagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 50159  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 284  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50160 caaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 8046105 - 8045822
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 102  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||    
T  8046105 caacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggatt 8046006  T
Q  103 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 202  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  8046005 aagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttcc 8045906  T
Q  203 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045905 aaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 11847888 - 11848179
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  11847888 acaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagat 11847987  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------ttt 195  Q
    ||||||||||||||||||||||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      ||     
T  11847988 taagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgatttta 11848087  T
Q  196 atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848088 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 88 - 277
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  88 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 187  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  188 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 15408139 - 15408205
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaa 15408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 277
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  87 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 186  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  187 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  193 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 271  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  241 ttatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 43 - 276
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  43 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 142  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  143 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  243 atgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 29614421 - 29614136
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    |||||| |||||| | |||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| ||||    
T  29614421 acaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagat 29614322  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattta-tctt 200  Q
    |||||||||||||| ||||||  | ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||    
T  29614321 taagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttattttt 29614223  T
Q  201 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614222 ccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 23838980 - 23839253
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  23838980 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 23839078  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  23839079 taagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttc 23839177  T
Q  202 caaa-actatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23839178 caaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 10986454 - 10986170
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  ||||||    
T  10986454 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagat 10986356  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  10986355 taagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttc 10986257  T
Q  202 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986256 caaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 4477639 - 4477912
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  || ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  4477639 acaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 4477737  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  4477738 taagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 4477836  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4477837 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 18800233 - 18800503
Alignment:
Q  16 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 115  Q
    |||||||||||||||||  || |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| |    
T  18800233 tcattccaccatcataccaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcatttt 18800331  T
Q  116 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaa 214  Q
    |||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  18800332 gaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaa 18800430  T
Q  215 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18800431 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 21565477 - 21565214
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||    
T  21565477 tacagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagattt 21565379  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 208  Q
    ||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   |    
T  21565378 cattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 21565281  T
Q  209 atgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 274  Q
    | |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565280 aagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  142 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 241  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  242 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 287
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  267 ccttaccttagttttgcagaa 287  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 277
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  88 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 187  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  188 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 277
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  88 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 187  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  188 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  163 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 262  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  263 tcacccttaccttag 277  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 24512899 - 24512833
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaa 24512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 276
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  80 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 179  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  180 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  193 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 8728007 - 8727735
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  ||||||    
T  8728007 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagat 8727908  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||    
T  8727907 taagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttc 8727809  T
Q  202 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727808 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 44477405 - 44477678
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  44477405 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 44477503  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  44477504 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44477602  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477603 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 44492563 - 44492836
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  44492563 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 44492661  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  44492662 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 44492760  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492761 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 23866396 - 23866680
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| ||||    
T  23866396 caacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agat 23866494  T
Q  102 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 200  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  23866495 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 23866594  T
Q  201 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866595 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 27941127 - 27940946
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| || || ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagat 27941029  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 185  Q
    ||| |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  27941028 taaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  267 ccttaccttagttttgcagaa 287  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 276
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  167 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 265  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  266 cccttacctta 276  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 14056619 - 14056553
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaa 14056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 27940907 - 27940840
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 288  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 27940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 1025 - 740
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    |||||||| |||  || |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| ||||    
T  1025 acaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agat 927  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||| || |||||||||||||||||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  926 taagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttc 827  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  826 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 19661726 - 19661454
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| ||||||    
T  19661726 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagat 19661628  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  19661627 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 19661529  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19661528 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 6483500 - 6483772
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  6483500 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 6483598  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  6483599 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6483697  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483698 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 6486967 - 6487239
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  6486967 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 6487065  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  6487066 taagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttc 6487164  T
Q  202 caaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6487165 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 26583617 - 26583892
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || |||| |||||||||||| |  |  |||||   | |||| || ||||||||||||||  |||||||| |  ||    
T  26583617 tacagatcattccaccatcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaacattatagattaggaatt 26583716  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaacta 209  Q
    |||||||||||| |  |||||||| | |||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  26583717 cattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaacta 26583815  T
Q  210 tgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26583816 tgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 23089320 - 23089057
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||    
T  23089320 tacagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagattt 23089222  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaact 208  Q
    ||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   |    
T  23089221 cattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggtt 23089124  T
Q  209 atgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 274  Q
    | |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089123 aagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 23878798 - 23879060
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| |||    
T  23878798 tacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagattt 23878896  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaact 208  Q
    |||||||||||| | ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   |    
T  23878897 cattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggtt 23878994  T
Q  209 atgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    | |||||||||||||||||  ||||||||| || || ||||  |||||||||||||||||||||||    
T  23878995 aagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 23101722 - 23101463
Alignment:
Q  16 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 115  Q
    |||||||||||||||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| ||||||||     
T  23101722 tcattccaccatcatacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattcc 23101624  T
Q  116 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaa 214  Q
    |||| | | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  |||    
T  23101623 gaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaa 23101526  T
Q  215 ttaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101525 ttaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  163 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 261  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  262 ctcacccttaccttag 277  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  215 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 287
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  96 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 195  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  196 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 287
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  96 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 195  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  196 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  205 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 286  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 14670 - 14398
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||    
T  14670 acaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagat 14572  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    ||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14571 taagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 14472  T
Q  202 c-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14471 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  68 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 167  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  168 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 111682 - 111727
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111682 acaacaattacagatcattccaccatcatacacaaattcatcaatt 111727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 20437297 - 20437024
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  20437297 acaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 20437199  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  20437198 taagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttc 20437100  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437099 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  68 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 166  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  167 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 266  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  267 ccttaccttagttttgcagaa 287  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 277
Target Start/End: Complemental strand, 10469 - 10195
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  10469 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 10371  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  10370 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 10272  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10271 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 277
Target Start/End: Complemental strand, 1799 - 1525
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  ||||||    
T  1799 acaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagat 1701  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  1700 taagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttc 1602  T
Q  202 caaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1601 caaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 2171 - 1887
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    |||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  |||    
T  2171 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggat 2072  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||    
T  2071 taagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttc 1974  T
Q  202 caaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1973 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 8848 - 8564
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    |||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  |||    
T  8848 acaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggat 8749  T
Q  102 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttc 201  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||    
T  8748 taagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttc 8651  T
Q  202 caaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8650 caaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 11131 - 11407
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| ||| |||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| |||    
T  11131 tacagatcaatccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagattt 11229  T
Q  110 cattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaact 208  Q
    |||| ||||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  11230 cattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaact 11328  T
Q  209 atgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11329 aagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 75 - 356
Alignment:
Q  3 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagatt 102  Q
    |||||| ||||| ||| |||||||| |||||   ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| ||||||||||    
T  75 caacaaatacagatcactccaccattatacaattattcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagatt 173  T
Q  103 aagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc 202  Q
    |||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  174 aagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttcc 272  T
Q  203 aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  273 aaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 2 - 288
Target Start/End: Original strand, 17950 - 18236
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||  |||||||||||| | ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |    
T  17950 acaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggt 18048  T
Q  102 taagttttcattctgaacattatattacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 200  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| ||    
T  18049 taagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttatttt 18147  T
Q  201 ccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 288  Q
    || ||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18148 cctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 18236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 3559 - 3295
Alignment:
Q  10 tacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagtttt 109  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| |||    
T  3559 tacagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagattt 3461  T
Q  110 cattctgaacattatattacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaac 207  Q
    |||||||||||| | ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||       
T  3460 cattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggt 3363  T
Q  208 tatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 274  Q
    || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3362 taagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 287
Target Start/End: Original strand, 30715 - 30923
Alignment:
Q  80 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 179  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  180 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 278  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  279 tttgcagaa 287  Q
    |||||||||    
T  30915 tttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 274
Target Start/End: Complemental strand, 3881 - 3624
Alignment:
Q  16 tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattct 115  Q
    |||||||||||||||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| ||||||||     
T  3881 tcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattcc 3783  T
Q  116 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaa 214  Q
    |||||| | ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || ||||    
T  3782 gaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaa 3685  T
Q  215 ttaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 274  Q
    |||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3684 ttaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 3443 - 3558
Alignment:
Q  2 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||    
T  3443 acaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagat 3542  T
Q  102 taagttttcattctga 117  Q
    ||||||||||||||||    
T  3543 taagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  86 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 185  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  186 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  86 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 185  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  186 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 282  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 904 - 991
Alignment:
Q  194 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 281  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  194 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 281  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 806 - 901
Alignment:
Q  37 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 133  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  37 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 133  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  165 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 263  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  264 cacccttaccttagttttgc 283  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 40587 - 40521
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 287  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 135473 - 135539
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaa 135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 22646 - 22582
Alignment:
Q  223 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaa 22582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  212 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  225 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 287  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 287
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  87 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 186  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  187 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 285  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  286 aa 287  Q
    ||    
T  23560 aa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 287
Target Start/End: Original strand, 680 - 780
Alignment:
Q  188 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 286  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  287 a 287  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  193 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  157 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 255  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  256 gatagtctcacccttacctta 276  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 290
Target Start/End: Original strand, 5487 - 5522
Alignment:
Q  255 agatagtctcacccttaccttagttttgcagaataa 290  Q
    ||||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaataa 5522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  221 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  205 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 286  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 280  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  87 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 186  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  187 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 274  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  222 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  193 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 277  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  220 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 276  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 80321 - 80293
Alignment:
Q  262 ctcacccttaccttagttttgcagaataa 290  Q
    |||||||||||||||||||||||||||||    
T  80321 ctcacccttaccttagttttgcagaataa 80293  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 100043 - 100015
Alignment:
Q  262 ctcacccttaccttagttttgcagaataa 290  Q
    |||||||||||||||||||||||||||||    
T  100043 ctcacccttaccttagttttgcagaataa 100015  T

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