View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2875_high_5 (Length: 432)

Name: NF2875_high_5
Description: NF2875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2875_high_5
NF2875_high_5
[»] chr8 (55 HSPs)
chr8 (13-177)||(36119403-36119567)
chr8 (190-375)||(43599303-43599489)
chr8 (189-375)||(10989167-10989354)
chr8 (188-375)||(15010955-15011143)
chr8 (189-313)||(8559572-8559696)
chr8 (189-313)||(33435670-33435794)
chr8 (190-314)||(33435875-33435999)
chr8 (189-313)||(20760649-20760773)
chr8 (188-286)||(12941560-12941658)
chr8 (192-302)||(35561660-35561770)
chr8 (196-314)||(36039782-36039900)
chr8 (189-313)||(30176453-30176577)
chr8 (190-314)||(40902381-40902505)
chr8 (189-307)||(36037185-36037299)
chr8 (190-313)||(10989023-10989146)
chr8 (195-254)||(30117484-30117543)
chr8 (190-269)||(43901050-43901129)
chr8 (188-294)||(18313774-18313880)
chr8 (190-313)||(22451336-22451463)
chr8 (188-313)||(16454624-16454749)
chr8 (191-304)||(42228764-42228877)
chr8 (190-313)||(15010810-15010934)
chr8 (190-269)||(5720900-5720979)
chr8 (226-375)||(35561486-35561637)
chr8 (205-294)||(26122752-26122841)
chr8 (211-313)||(3183900-3184002)
chr8 (206-307)||(34248085-34248186)
chr8 (189-269)||(15968097-15968179)
chr8 (206-313)||(18905864-18905971)
chr8 (190-269)||(45122303-45122381)
chr8 (190-287)||(4195965-4196063)
chr8 (190-260)||(25186764-25186834)
chr8 (190-235)||(8559745-8559790)
chr8 (206-307)||(34248367-34248468)
chr8 (228-313)||(36997196-36997281)
chr8 (198-269)||(3895131-3895202)
chr8 (190-249)||(8559852-8559910)
chr8 (190-269)||(15968461-15968540)
chr8 (206-313)||(32931409-32931516)
chr8 (196-266)||(8056273-8056343)
chr8 (190-255)||(5496553-5496618)
chr8 (189-313)||(15856964-15857089)
chr8 (190-235)||(15857171-15857216)
chr8 (191-307)||(8056482-8056598)
chr8 (190-230)||(43599510-43599550)
chr8 (190-269)||(3895372-3895450)
chr8 (206-313)||(21085137-21085244)
chr8 (206-313)||(21653335-21653442)
chr8 (206-313)||(21653812-21653919)
chr8 (238-313)||(22277564-22277639)
chr8 (191-274)||(37537123-37537206)
chr8 (206-313)||(43984305-43984412)
chr8 (190-236)||(30065983-30066029)
chr8 (206-307)||(23027823-23027924)
chr8 (190-294)||(39124916-39125020)
[»] chr7 (77 HSPs)
chr7 (188-375)||(9378783-9378971)
chr7 (189-375)||(13310351-13310538)
chr7 (190-375)||(23396601-23396787)
chr7 (189-375)||(40703785-40703972)
chr7 (190-314)||(6783030-6783154)
chr7 (190-313)||(33855683-33855806)
chr7 (196-339)||(31374763-31374907)
chr7 (190-287)||(9378992-9379089)
chr7 (190-313)||(23821665-23821788)
chr7 (190-305)||(35866636-35866751)
chr7 (190-339)||(16564886-16565036)
chr7 (190-339)||(16600626-16600776)
chr7 (188-306)||(39808593-39808711)
chr7 (192-313)||(6813067-6813188)
chr7 (188-284)||(6782816-6782912)
chr7 (189-268)||(6751743-6751822)
chr7 (190-269)||(16565090-16565169)
chr7 (190-269)||(16600493-16600572)
chr7 (190-269)||(31357708-31357787)
chr7 (190-268)||(6751539-6751617)
chr7 (190-284)||(29252568-29252662)
chr7 (206-315)||(1661178-1661287)
chr7 (190-307)||(40703647-40703764)
chr7 (189-269)||(33833941-33834021)
chr7 (190-365)||(38948350-38948525)
chr7 (190-375)||(6813211-6813395)
chr7 (190-269)||(22841044-22841123)
chr7 (189-255)||(5775873-5775939)
chr7 (190-286)||(2179646-2179743)
chr7 (190-254)||(48113989-48114053)
chr7 (190-339)||(258423-258571)
chr7 (190-269)||(4258033-4258112)
chr7 (197-339)||(8681883-8682026)
chr7 (190-269)||(33834147-33834226)
chr7 (194-347)||(43565960-43566113)
chr7 (190-247)||(23390582-23390639)
chr7 (190-258)||(33855473-33855541)
chr7 (195-307)||(36621019-36621130)
chr7 (190-258)||(43366399-43366467)
chr7 (190-245)||(4258261-4258316)
chr7 (190-265)||(10903314-10903389)
chr7 (190-265)||(10903521-10903596)
chr7 (198-313)||(23396814-23396929)
chr7 (190-300)||(5266351-5266461)
chr7 (198-255)||(47856038-47856095)
chr7 (206-313)||(1663593-1663701)
chr7 (190-313)||(2232087-2232211)
chr7 (227-307)||(29780176-29780256)
chr7 (189-293)||(36237793-36237897)
chr7 (206-294)||(37272053-37272141)
chr7 (212-307)||(7135238-7135333)
chr7 (190-233)||(23821540-23821583)
chr7 (181-235)||(6214302-6214356)
chr7 (212-269)||(29645829-29645886)
chr7 (213-306)||(39808460-39808553)
chr7 (206-303)||(43384279-43384376)
chr7 (189-249)||(21557007-21557067)
chr7 (206-294)||(27585264-27585352)
chr7 (238-314)||(28910072-28910148)
chr7 (190-294)||(40137704-40137808)
chr7 (206-313)||(12578449-12578556)
chr7 (197-304)||(24426752-24426858)
chr7 (190-269)||(29646056-29646135)
chr7 (212-307)||(43288278-43288373)
chr7 (212-307)||(43288546-43288641)
chr7 (190-268)||(30768410-30768488)
chr7 (206-300)||(34748786-34748880)
chr7 (206-307)||(257262-257363)
chr7 (207-288)||(14691081-14691162)
chr7 (234-307)||(40703406-40703479)
chr7 (231-307)||(12518165-12518241)
chr7 (226-314)||(34590556-34590644)
chr7 (206-302)||(36092599-36092695)
chr7 (214-314)||(43167881-43167981)
chr7 (206-294)||(43383954-43384042)
chr7 (231-307)||(48116291-48116367)
chr7 (212-256)||(49040580-49040624)
[»] chr5 (71 HSPs)
chr5 (186-365)||(18914304-18914484)
chr5 (189-375)||(13413575-13413761)
chr5 (190-375)||(38376723-38376909)
chr5 (189-375)||(20720476-20720663)
chr5 (196-365)||(40168977-40169147)
chr5 (190-375)||(43490389-43490575)
chr5 (192-380)||(3015544-3015731)
chr5 (190-314)||(18914149-18914273)
chr5 (197-380)||(34457095-34457279)
chr5 (190-307)||(28358030-28358147)
chr5 (198-314)||(35526976-35527092)
chr5 (190-313)||(3015406-3015529)
chr5 (190-313)||(34457295-34457418)
chr5 (188-313)||(3762896-3763021)
chr5 (189-375)||(48237-48422)
chr5 (190-313)||(24125054-24125177)
chr5 (189-314)||(35527262-35527388)
chr5 (190-307)||(48099-48216)
chr5 (190-307)||(2908557-2908674)
chr5 (190-285)||(43490273-43490368)
chr5 (190-365)||(2908705-2908881)
chr5 (190-375)||(28156028-28156211)
chr5 (189-269)||(39268009-39268089)
chr5 (190-313)||(15287045-15287168)
chr5 (190-248)||(18107532-18107590)
chr5 (192-294)||(30330643-30330745)
chr5 (190-269)||(36878318-36878397)
chr5 (206-313)||(38131772-38131879)
chr5 (190-304)||(18107825-18107939)
chr5 (192-258)||(32501205-32501271)
chr5 (190-315)||(11632423-11632548)
chr5 (190-303)||(37656731-37656844)
chr5 (190-303)||(37781843-37781956)
chr5 (190-294)||(395359-395463)
chr5 (190-294)||(39268218-39268322)
chr5 (190-339)||(36307885-36308034)
chr5 (190-287)||(22732752-22732849)
chr5 (206-314)||(13844021-13844129)
chr5 (190-314)||(28156231-28156354)
chr5 (190-269)||(10668352-10668431)
chr5 (198-268)||(17135519-17135589)
chr5 (191-269)||(18873227-18873305)
chr5 (188-269)||(4563724-4563805)
chr5 (190-255)||(17130036-17130096)
chr5 (206-307)||(29432420-29432521)
chr5 (206-307)||(37995629-37995730)
chr5 (278-365)||(35527114-35527202)
chr5 (206-313)||(873685-873792)
chr5 (206-313)||(1028082-1028189)
chr5 (190-269)||(5127946-5128025)
chr5 (190-304)||(2716538-2716652)
chr5 (190-313)||(4296654-4296779)
chr5 (190-231)||(13413782-13413823)
chr5 (190-247)||(29008064-29008121)
chr5 (212-313)||(40168848-40168949)
chr5 (206-294)||(22196561-22196649)
chr5 (238-314)||(24994109-24994185)
chr5 (196-244)||(35527199-35527247)
chr5 (227-307)||(38663276-38663356)
chr5 (206-313)||(13843705-13843812)
chr5 (231-313)||(12965235-12965317)
chr5 (190-307)||(15286845-15286963)
chr5 (195-269)||(30870918-30870992)
chr5 (217-294)||(1892098-1892175)
chr5 (276-337)||(6918927-6918988)
chr5 (276-337)||(6919174-6919235)
chr5 (238-307)||(24918201-24918270)
chr5 (190-254)||(1893780-1893844)
chr5 (192-304)||(2716337-2716449)
chr5 (240-300)||(24792124-24792184)
chr5 (197-269)||(40961748-40961820)
[»] chr6 (49 HSPs)
chr6 (190-376)||(16876935-16877122)
chr6 (190-314)||(28149785-28149909)
chr6 (190-313)||(26098746-26098869)
chr6 (190-313)||(15102613-15102737)
chr6 (190-313)||(15102743-15102863)
chr6 (190-313)||(25999015-25999138)
chr6 (190-313)||(11313371-11313494)
chr6 (190-313)||(15101100-15101223)
chr6 (190-313)||(16590176-16590299)
chr6 (190-313)||(16605081-16605204)
chr6 (190-313)||(26098334-26098457)
chr6 (190-334)||(26098540-26098685)
chr6 (190-375)||(11316835-11317019)
chr6 (190-249)||(11317040-11317099)
chr6 (190-313)||(25998809-25998932)
chr6 (212-313)||(5269262-5269363)
chr6 (190-307)||(24558575-24558692)
chr6 (197-313)||(19291907-19292023)
chr6 (190-314)||(24558780-24558904)
chr6 (206-313)||(10418327-10418434)
chr6 (206-319)||(12134466-12134579)
chr6 (196-313)||(16876819-16876936)
chr6 (215-339)||(19712571-19712696)
chr6 (188-284)||(6623443-6623539)
chr6 (193-249)||(30526832-30526889)
chr6 (193-249)||(30539415-30539471)
chr6 (206-313)||(19054501-19054608)
chr6 (190-313)||(19712393-19712516)
chr6 (190-269)||(26394543-26394622)
chr6 (206-313)||(30539243-30539350)
chr6 (189-307)||(15293869-15293987)
chr6 (282-375)||(18494407-18494501)
chr6 (197-282)||(2902819-2902902)
chr6 (206-307)||(8144025-8144126)
chr6 (206-307)||(10733433-10733534)
chr6 (206-313)||(1744831-1744938)
chr6 (206-313)||(24055098-24055205)
chr6 (190-292)||(18494284-18494386)
chr6 (206-249)||(31926-31969)
chr6 (213-284)||(25184018-25184089)
chr6 (190-236)||(12124760-12124806)
chr6 (239-313)||(17147894-17147968)
chr6 (253-307)||(22911485-22911539)
chr6 (190-247)||(2923011-2923068)
chr6 (212-313)||(17096687-17096788)
chr6 (206-307)||(28072467-28072568)
chr6 (190-239)||(30527034-30527083)
chr6 (231-307)||(27914321-27914397)
chr6 (190-269)||(29742469-29742546)
[»] chr4 (91 HSPs)
chr4 (190-375)||(12016817-12017003)
chr4 (190-380)||(17077067-17077256)
chr4 (190-304)||(28245985-28246099)
chr4 (189-375)||(28245782-28245964)
chr4 (190-313)||(17076929-17077052)
chr4 (189-313)||(43943664-43943788)
chr4 (190-313)||(25753594-25753717)
chr4 (190-313)||(27634315-27634438)
chr4 (190-362)||(5488359-5488532)
chr4 (190-313)||(12016672-12016795)
chr4 (188-313)||(28395168-28395292)
chr4 (190-314)||(29113441-29113565)
chr4 (190-313)||(21498523-21498646)
chr4 (190-313)||(53863897-53864020)
chr4 (190-313)||(54210369-54210492)
chr4 (190-339)||(56511289-56511439)
chr4 (191-295)||(3055776-3055880)
chr4 (190-294)||(28497222-28497326)
chr4 (190-313)||(1922980-1923103)
chr4 (190-313)||(8559960-8560083)
chr4 (190-375)||(33629651-33629835)
chr4 (190-287)||(39110899-39110996)
chr4 (206-329)||(990555-990679)
chr4 (190-269)||(8304988-8305067)
chr4 (190-269)||(23350791-23350870)
chr4 (190-313)||(56511496-56511619)
chr4 (190-284)||(49380898-49380992)
chr4 (194-255)||(33629917-33629978)
chr4 (204-339)||(10390437-10390573)
chr4 (189-313)||(22865761-22865884)
chr4 (197-297)||(52827237-52827337)
chr4 (206-313)||(991212-991319)
chr4 (190-265)||(47491883-47491958)
chr4 (212-313)||(23018484-23018585)
chr4 (190-266)||(3640198-3640274)
chr4 (204-307)||(7892646-7892750)
chr4 (276-375)||(27634457-27634557)
chr4 (206-314)||(29669351-29669459)
chr4 (212-312)||(45426926-45427026)
chr4 (190-304)||(26806503-26806615)
chr4 (257-375)||(35399342-35399461)
chr4 (195-294)||(50307273-50307372)
chr4 (206-313)||(51469489-51469596)
chr4 (206-313)||(52214623-52214730)
chr4 (238-313)||(53386101-53386176)
chr4 (206-313)||(53740190-53740297)
chr4 (189-255)||(42312821-42312887)
chr4 (190-268)||(45684208-45684286)
chr4 (202-284)||(49380664-49380746)
chr4 (190-231)||(33629596-33629637)
chr4 (190-231)||(33629855-33629896)
chr4 (206-314)||(15665161-15665269)
chr4 (198-294)||(20093332-20093428)
chr4 (190-294)||(33797117-33797221)
chr4 (190-269)||(3640448-3640527)
chr4 (231-314)||(27048125-27048208)
chr4 (206-313)||(29669667-29669774)
chr4 (206-313)||(51470491-51470598)
chr4 (234-312)||(400373-400451)
chr4 (212-294)||(5212009-5212091)
chr4 (190-300)||(14945135-14945245)
chr4 (192-258)||(20441500-20441566)
chr4 (206-312)||(43972363-43972469)
chr4 (199-284)||(7806413-7806497)
chr4 (212-265)||(9758318-9758371)
chr4 (228-313)||(45427241-45427326)
chr4 (206-267)||(52810660-52810721)
chr4 (206-307)||(56509617-56509718)
chr4 (206-313)||(34205982-34206090)
chr4 (190-294)||(39110709-39110813)
chr4 (219-259)||(40197229-40197269)
chr4 (206-313)||(13254391-13254498)
chr4 (214-269)||(14115524-14115579)
chr4 (206-305)||(21497680-21497779)
chr4 (206-305)||(21498195-21498294)
chr4 (190-269)||(21647614-21647693)
chr4 (206-313)||(27048397-27048504)
chr4 (212-306)||(34206251-34206346)
chr4 (191-294)||(35565072-35565174)
chr4 (206-313)||(36558455-36558562)
chr4 (190-249)||(53559358-53559417)
chr4 (190-269)||(53720703-53720782)
chr4 (206-313)||(53738197-53738304)
chr4 (212-286)||(4645866-4645940)
chr4 (239-313)||(6778665-6778739)
chr4 (262-312)||(39910406-39910456)
chr4 (190-303)||(5065845-5065958)
chr4 (205-254)||(7198034-7198083)
chr4 (314-375)||(21498441-21498502)
chr4 (215-334)||(9938466-9938586)
chr4 (206-258)||(37288913-37288965)
[»] chr3 (86 HSPs)
chr3 (190-361)||(39078711-39078883)
chr3 (184-374)||(9264427-9264618)
chr3 (190-374)||(4191049-4191234)
chr3 (189-375)||(51642561-51642749)
chr3 (190-375)||(9264219-9264405)
chr3 (190-375)||(37058697-37058883)
chr3 (190-314)||(50692518-50692642)
chr3 (192-313)||(49477528-49477649)
chr3 (190-365)||(22407584-22407760)
chr3 (368-432)||(34899911-34899975)
chr3 (189-313)||(40230628-40230752)
chr3 (190-364)||(50692315-50692486)
chr3 (190-313)||(9264075-9264198)
chr3 (189-375)||(37223566-37223753)
chr3 (190-313)||(40230424-40230546)
chr3 (190-365)||(53640108-53640284)
chr3 (190-313)||(22339733-22339856)
chr3 (197-375)||(39956600-39956779)
chr3 (190-287)||(54495523-54495620)
chr3 (189-313)||(4029633-4029757)
chr3 (190-314)||(54591453-54591577)
chr3 (212-375)||(10758934-10759098)
chr3 (190-313)||(25627909-25628033)
chr3 (190-314)||(35011856-35011980)
chr3 (190-294)||(51338449-51338553)
chr3 (189-339)||(35011648-35011799)
chr3 (190-313)||(51642417-51642540)
chr3 (188-269)||(32034081-32034162)
chr3 (220-375)||(49477349-49477505)
chr3 (190-314)||(50338370-50338494)
chr3 (190-290)||(53639977-53640077)
chr3 (197-313)||(33909619-33909733)
chr3 (190-307)||(35015477-35015594)
chr3 (212-313)||(50203846-50203947)
chr3 (197-313)||(19820517-19820632)
chr3 (212-284)||(32215548-32215620)
chr3 (190-313)||(10758757-10758880)
chr3 (200-315)||(11414366-11414480)
chr3 (190-312)||(38421977-38422097)
chr3 (190-313)||(39956456-39956579)
chr3 (190-269)||(40926446-40926525)
chr3 (206-313)||(43101360-43101467)
chr3 (204-314)||(44461055-44461165)
chr3 (186-268)||(53761432-53761514)
chr3 (190-307)||(42258902-42259019)
chr3 (206-307)||(44145116-44145217)
chr3 (197-313)||(12800089-12800205)
chr3 (190-294)||(44145403-44145506)
chr3 (206-313)||(4256242-4256349)
chr3 (190-313)||(22407430-22407553)
chr3 (190-269)||(25578714-25578792)
chr3 (198-313)||(26366731-26366846)
chr3 (198-313)||(29763685-29763799)
chr3 (197-268)||(34992868-34992939)
chr3 (190-269)||(35358486-35358565)
chr3 (194-265)||(40927026-40927097)
chr3 (190-265)||(47702461-47702536)
chr3 (195-269)||(26926904-26926978)
chr3 (190-236)||(29369793-29369839)
chr3 (216-313)||(16078852-16078949)
chr3 (190-307)||(21832686-21832803)
chr3 (196-265)||(39269498-39269567)
chr3 (189-258)||(42637791-42637860)
chr3 (190-254)||(5440569-5440633)
chr3 (197-265)||(34992576-34992644)
chr3 (190-313)||(21832188-21832311)
chr3 (190-269)||(40926695-40926774)
chr3 (206-313)||(54369047-54369154)
chr3 (190-260)||(26915108-26915178)
chr3 (195-249)||(42604905-42604959)
chr3 (228-314)||(44573966-44574052)
chr3 (190-314)||(21833516-21833640)
chr3 (206-305)||(24539161-24539261)
chr3 (189-265)||(39018827-39018903)
chr3 (190-313)||(51836290-51836411)
chr3 (206-305)||(3985781-3985880)
chr3 (206-313)||(21750483-21750590)
chr3 (206-313)||(34715444-34715551)
chr3 (192-255)||(42311207-42311270)
chr3 (238-313)||(44573679-44573754)
chr3 (212-307)||(46139246-46139341)
chr3 (206-307)||(13769286-13769387)
chr3 (206-287)||(27219337-27219418)
chr3 (212-269)||(37040016-37040073)
chr3 (206-294)||(14170007-14170095)
chr3 (206-294)||(44573334-44573422)
[»] chr2 (72 HSPs)
chr2 (189-375)||(3435412-3435599)
chr2 (189-375)||(12431889-12432076)
chr2 (190-375)||(33985901-33986087)
chr2 (190-365)||(29684003-29684179)
chr2 (190-307)||(17727396-17727513)
chr2 (189-314)||(20998977-20999102)
chr2 (190-294)||(883609-883713)
chr2 (190-287)||(884049-884146)
chr2 (190-315)||(32667175-32667300)
chr2 (190-314)||(16006969-16007093)
chr2 (197-375)||(29101749-29101929)
chr2 (190-301)||(27545117-27545228)
chr2 (190-313)||(34775349-34775472)
chr2 (195-375)||(883847-884028)
chr2 (190-314)||(33985759-33985881)
chr2 (190-313)||(12432097-12432220)
chr2 (190-313)||(25621274-25621397)
chr2 (190-313)||(31761124-31761247)
chr2 (190-292)||(19860029-19860131)
chr2 (212-313)||(6183355-6183456)
chr2 (189-294)||(39386661-39386766)
chr2 (190-306)||(32666969-32667085)
chr2 (190-269)||(6986449-6986528)
chr2 (189-256)||(12419829-12419896)
chr2 (190-313)||(40009966-40010089)
chr2 (190-268)||(29695373-29695451)
chr2 (189-294)||(7257616-7257721)
chr2 (190-313)||(8044534-8044658)
chr2 (206-313)||(3976460-3976567)
chr2 (189-260)||(19859916-19859987)
chr2 (190-287)||(29676286-29676383)
chr2 (206-314)||(18901852-18901960)
chr2 (190-284)||(10570927-10571021)
chr2 (195-269)||(26847276-26847349)
chr2 (195-260)||(4721846-4721911)
chr2 (231-307)||(10429772-10429848)
chr2 (226-306)||(10536925-10537005)
chr2 (190-294)||(10542071-10542175)
chr2 (190-254)||(22447297-22447361)
chr2 (219-307)||(33277548-33277636)
chr2 (206-313)||(42768323-42768428)
chr2 (206-313)||(3976992-3977099)
chr2 (263-314)||(15820100-15820151)
chr2 (206-313)||(23054334-23054441)
chr2 (206-313)||(43195792-43195899)
chr2 (206-292)||(7877852-7877938)
chr2 (229-307)||(10849486-10849564)
chr2 (190-312)||(29684211-29684333)
chr2 (190-339)||(39108080-39108230)
chr2 (188-249)||(14127240-14127301)
chr2 (189-282)||(18607273-18607366)
chr2 (228-313)||(21214190-21214275)
chr2 (190-255)||(21734408-21734473)
chr2 (226-282)||(10485222-10485278)
chr2 (284-375)||(29695471-29695563)
chr2 (241-313)||(39108398-39108470)
chr2 (206-305)||(25286257-25286356)
chr2 (190-301)||(28895519-28895629)
chr2 (213-284)||(32810894-32810965)
chr2 (206-317)||(43169250-43169361)
chr2 (190-236)||(10485170-10485216)
chr2 (198-268)||(17265009-17265079)
chr2 (255-313)||(37812272-37812330)
chr2 (198-304)||(38760315-38760421)
chr2 (255-313)||(39108277-39108335)
chr2 (206-307)||(11969060-11969161)
chr2 (262-314)||(5424770-5424822)
chr2 (217-269)||(6986376-6986428)
chr2 (240-350)||(7257088-7257200)
chr2 (190-314)||(13839247-13839371)
chr2 (206-294)||(21213893-21213981)
chr2 (276-320)||(22447178-22447222)
[»] chr1 (81 HSPs)
chr1 (190-375)||(29273151-29273337)
chr1 (190-380)||(39649005-39649196)
chr1 (198-365)||(43361693-43361861)
chr1 (190-313)||(1233918-1234041)
chr1 (195-313)||(41812647-41812765)
chr1 (212-375)||(15391833-15391997)
chr1 (189-375)||(21428192-21428380)
chr1 (190-313)||(52846838-52846961)
chr1 (187-313)||(5222683-5222809)
chr1 (190-312)||(15392017-15392139)
chr1 (190-313)||(21428047-21428170)
chr1 (198-313)||(43361541-43361656)
chr1 (190-307)||(22892683-22892800)
chr1 (190-313)||(24382349-24382472)
chr1 (190-313)||(48558310-48558433)
chr1 (190-339)||(38871117-38871267)
chr1 (190-314)||(2997044-2997168)
chr1 (189-313)||(13959393-13959517)
chr1 (190-269)||(29413340-29413419)
chr1 (190-269)||(52921500-52921579)
chr1 (190-307)||(21538929-21539046)
chr1 (198-307)||(33342273-33342382)
chr1 (189-313)||(11018845-11018969)
chr1 (197-269)||(22826778-22826850)
chr1 (190-274)||(39648906-39648989)
chr1 (206-313)||(2697320-2697427)
chr1 (190-313)||(9380892-9381015)
chr1 (206-313)||(17419795-17419902)
chr1 (257-375)||(29272992-29273111)
chr1 (276-365)||(5325069-5325159)
chr1 (190-334)||(2997228-2997373)
chr1 (206-313)||(4022114-4022221)
chr1 (189-248)||(45395543-45395602)
chr1 (190-260)||(24382193-24382263)
chr1 (190-284)||(49142674-49142767)
chr1 (190-294)||(25799112-25799217)
chr1 (206-294)||(38474291-38474379)
chr1 (190-313)||(38870938-38871062)
chr1 (206-313)||(8520082-8520189)
chr1 (189-268)||(11590411-11590490)
chr1 (218-313)||(15013545-15013640)
chr1 (190-285)||(20428991-20429086)
chr1 (190-249)||(29265910-29265969)
chr1 (212-307)||(40664224-40664319)
chr1 (212-307)||(43423293-43423388)
chr1 (231-313)||(21638255-21638337)
chr1 (190-268)||(24382602-24382680)
chr1 (192-254)||(29413136-29413198)
chr1 (226-307)||(24131876-24131957)
chr1 (190-235)||(39648827-39648872)
chr1 (251-375)||(46098530-46098655)
chr1 (192-249)||(49828665-49828722)
chr1 (189-269)||(11581746-11581826)
chr1 (206-294)||(20735763-20735851)
chr1 (190-294)||(28119750-28119854)
chr1 (190-254)||(42845069-42845133)
chr1 (190-254)||(45982174-45982238)
chr1 (190-269)||(47377827-47377909)
chr1 (198-313)||(9381099-9381214)
chr1 (197-268)||(15391747-15391818)
chr1 (206-313)||(31305719-31305826)
chr1 (190-249)||(36332303-36332362)
chr1 (190-269)||(47086310-47086389)
chr1 (190-284)||(49895345-49895437)
chr1 (227-313)||(12233312-12233398)
chr1 (190-228)||(22892495-22892533)
chr1 (213-307)||(27957804-27957898)
chr1 (190-249)||(36331907-36331962)
chr1 (190-235)||(12314570-12314615)
chr1 (190-243)||(18374517-18374570)
chr1 (228-313)||(20735552-20735637)
chr1 (234-307)||(22892428-22892501)
chr1 (228-313)||(33879767-33879852)
chr1 (228-313)||(33964403-33964488)
chr1 (202-254)||(10017376-10017428)
chr1 (276-375)||(12314449-12314549)
chr1 (212-307)||(13356911-13357007)
chr1 (206-294)||(19937051-19937139)
chr1 (190-254)||(20429283-20429347)
chr1 (227-307)||(35024242-35024322)
chr1 (206-294)||(45858663-45858751)
[»] scaffold0434 (2 HSPs)
scaffold0434 (190-375)||(13298-13484)
scaffold0434 (190-313)||(13505-13628)
[»] scaffold0029 (1 HSPs)
scaffold0029 (197-313)||(76851-76967)
[»] scaffold0989 (1 HSPs)
scaffold0989 (191-313)||(2936-3058)
[»] scaffold0054 (2 HSPs)
scaffold0054 (190-313)||(21252-21376)
scaffold0054 (253-307)||(11338-11392)
[»] scaffold1138 (1 HSPs)
scaffold1138 (197-313)||(1862-1978)
[»] scaffold0060 (2 HSPs)
scaffold0060 (190-313)||(13621-13744)
scaffold0060 (191-255)||(59518-59579)
[»] scaffold0419 (1 HSPs)
scaffold0419 (238-313)||(4228-4303)
[»] scaffold0339 (1 HSPs)
scaffold0339 (189-258)||(15696-15765)
[»] scaffold0166 (1 HSPs)
scaffold0166 (240-300)||(34507-34567)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 36119403 - 36119567
Alignment:
Q  13 cagagatggagaatgctttgttcaatgtacacaacattttaaaagtaatgatttagatttctattaatatttctgcattttgcagttattttacttacct 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36119403 cagagatggagaatgctttgttcaatgtacacaacattttaaaagtaatgatttagatttctattaatatttctgcattttgcagttattatacttacct 36119502  T
Q  113 agcagaaaatgttgacaggtgagttcatagttccaattctgtccacattatagcacgtttcatga 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36119503 agcagaaaatgttgacaggtgagttcatagttccaattctgtccacattatagcacgtttcatga 36119567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 43599303 - 43599489
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  43599303 tattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 43599402  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| |  ||||||| |||||||||||||| || ||||||    
T  43599403 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagccaaaagag 43599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 10989354 - 10989167
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||| |||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  10989354 ttattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 10989255  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||| ||| || ||||||    
T  10989254 atgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcatcaagcccaaagag 10989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 375
Target Start/End: Complemental strand, 15011143 - 15010955
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||| |||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||||||    
T  15011143 tttattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaag 15011044  T
Q  288 aatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     |||||| |  ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||  |||||||||||||| || ||||||    
T  15011043 gatgagttaagccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaatctattcacgcaccaagcccaaagag 15010955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 8559572 - 8559696
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||     
T  8559572 ttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagg 8559671  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || |||||||||||||||    
T  8559672 atgagttaggccccaaattacaaca 8559696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 33435670 - 33435794
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||| ||||||  ||||||||||||| | ||||||||| |||||||||| |||||||||||| |||| ||| ||| |||||||||||||     
T  33435670 ttattgggaaaaactcaagtctcacatcggatagataaaactcttgataagagtttatataaaggagacaatcctcatcttacaagtcggttttgtaagg 33435769  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||||||| |||||    
T  33435770 atgagttagaccccaaatttcaaca 33435794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 33435875 - 33435999
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||| |||  |||||||||||  |    
T  33435875 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttatataaaggagacaatcctcaccttacaagccggttttgtaaaga 33435974  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| |||||  ||||| ||||||    
T  33435975 tgagttagaccttaaatttcaacag 33435999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 20760773 - 20760649
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| | ||| |||| |||||||| |||| ||||||||||||     
T  20760773 ttattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaagg 20760674  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || ||||||||| |||||    
T  20760673 atgagttaggccccaaatttcaaca 20760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 12941560 - 12941658
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaa 286  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||  | | ||||| |||||| ||||||||||||    
T  12941560 tttattgggaaaaacccaagtaccacatcagatagatgagactcatgatgagagtttataaaaaggaggtactactcactttgcaagtcggttttgtaa 12941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 35561660 - 35561770
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||  |||||||||||| ||||| |||| |||||||||||   |||||||||||| |||    
T  35561660 ttgggaaaaacccaagtcccacatcggatagataagattcttgagaagagtttataaagaggaggcaatcctcaccttgcatgccggttttgtaaggatg 35561759  T
Q  292 agtcagacccc 302  Q
    ||| |||||||    
T  35561760 agttagacccc 35561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 36039900 - 36039782
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtc 295  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||  || | |||||||  |||  |||||||||||| ||||||     
T  36039900 gaaaaacccaaatctcacatcggatagatgagactcttgatgagagtttataaagaggatgcactactcacctcacaagccggttttgtaaggatgagtt 36039801  T
Q  296 agaccccaaattacaacag 314  Q
    |||||||||||| ||||||    
T  36039800 agaccccaaatttcaacag 36039782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 30176577 - 30176453
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||| || |  ||||||  |||  ||||||||||||     
T  30176577 ttattgggaaaaactcaagtcccacatcggatagacgagactcttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaagg 30176478  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || |||| |||| |||||    
T  30176477 atgagttaggccccgaatttcaaca 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 40902505 - 40902381
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||| | ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  40902505 tattgggaaaaacccaagttccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 40902406  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    | ||| || ||||||||| ||||||    
T  40902405 taagttaggccccaaatttcaacag 40902381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 36037185 - 36037299
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||    |||| |||||||||||||||||||||||||||||||||||||| ||||  || | |||||||  |||  ||||||||||||     
T  36037185 ttattgggaaaaac----gtcccacatcggatagatgagactcttgatgagagtttataaagaggatgcactcctcacctcacaagccggttttgtaagg 36037280  T
Q  289 atgagtcagaccccaaatt 307  Q
    |||||| ||||||||||||    
T  36037281 atgagttagaccccaaatt 36037299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 10989146 - 10989023
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||||||||||| ||||| | ||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  10989146 tattggaaaaaacccaagtcccacatcaggtagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 10989047  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  10989046 tgagttaggccccaaatttcaaca 10989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 30117543 - 30117484
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  30117543 ggaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaagagga 30117484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 43901129 - 43901050
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  43901129 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcacctt 43901050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 18313774 - 18313880
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||| | | |||||||| | ||||| |||| |||||||| ||| | |||||||||||    
T  18313774 tttattgggaaaaatccaagtcccacatcggatagataagactcttgttaaaagtttatatagaggaggcaatcctcacctttcaagtaggttttgtaag 18313873  T
Q  288 aatgagt 294  Q
     ||||||    
T  18313874 gatgagt 18313880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 22451336 - 22451463
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactc----ttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgta 285  Q
    |||||||||||||  ||||||||||||||||||| |||||||    ||||||||| |||||||| |||||||| |||||||||  |||  ||||||||||    
T  22451336 tattgggaaaaacttaagtcctacatcggatagacgagactcttgattgatgagaatttataaagaggagacacttctcacctcacaagccggttttgta 22451435  T
Q  286 agaatgagtcagaccccaaattacaaca 313  Q
    || |||||| |  ||||||||| |||||    
T  22451436 aggatgagttatgccccaaatttcaaca 22451463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 313
Target Start/End: Complemental strand, 16454749 - 16454624
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||| ||||| |||||||  ||||||||||||| |||||||| |  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||    
T  16454749 tttattggaaaaaaaccaagtctcacatcggatagataagactcttaagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaag 16454650  T
Q  288 aatgagtcagaccccaaattacaaca 313  Q
     |||||| || ||||||||| |||||    
T  16454649 gatgagttaggccccaaatttcaaca 16454624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 42228764 - 42228877
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaat 290  Q
    ||||||||||| | |||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  || ||||||||| ||    
T  42228764 attgggaaaaatctaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggat 42228863  T
Q  291 gagtcagaccccaa 304  Q
    |||| |||||||||    
T  42228864 gagttagaccccaa 42228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 15010934 - 15010810
Alignment:
Q  190 tattgggaaaaaccc-aagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||||  ||| |||||||| ||||| |||| |||||||| |||  ||||||| ||||     
T  15010934 tattgggaaaaaccccaagtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttataagg 15010835  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || ||||||||| |||||    
T  15010834 atgagttaggccccaaatttcaaca 15010810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 5720979 - 5720900
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| ||||||||    
T  5720979 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 5720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 226 - 375
Target Start/End: Original strand, 35561486 - 35561637
Alignment:
Q  226 agactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca-gaccccaaattacaaca-ggtattagaa 323  Q
    ||||||||||  |||||||||||| |||||  ||| ||||||||| ||  |||||||||||| |||||| | | ||||||||| ||||| ||||| |||     
T  35561486 agactcttgagaagagtttataaagaggaggtaatcctcaccttgtaagccggttttgtaaggatgagttaggcccccaaatttcaacatggtatcagag 35561585  T
Q  324 cttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  35561586 cttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 35561637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 26122841 - 26122752
Alignment:
Q  205 aagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||  |||| ||||| || ||| | |||||| |||| ||||||    
T  26122841 aagtcccacatcggatagatgagactcttgatgagagtttataaagaggatgcaatcctcacattacaagttggttttataaggatgagt 26122752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 3184002 - 3183900
Alignment:
Q  211 tacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattaca 310  Q
    ||||||||||||||  |||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||  |||||| || ||||||||| ||    
T  3184002 tacatcggatagataggactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttaggccccaaatttca 3183903  T
Q  311 aca 313  Q
    |||    
T  3183902 aca 3183900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 34248085 - 34248186
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  |||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  34248085 agtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 34248184  T
Q  306 tt 307  Q
    ||    
T  34248185 tt 34248186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 15968179 - 15968097
Alignment:
Q  189 ttattgggaaaaacccaagtcct--acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||| ||||   ||||| ||| ||| ||||||||||| |||||||||| |||||||||||| ||||||||    
T  15968179 ttattgggaaaaacccatgtcccccacatcagattgataagactcttgataagagtttatataaaggagacaatcctcacctt 15968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 18905864 - 18905971
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  18905864 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 18905963  T
Q  306 ttacaaca 313  Q
    || |||||    
T  18905964 tttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 45122303 - 45122381
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||| |||||| | |||||||| ||||||||    
T  45122303 tattgggaaaaacccaagtcccacatctgatagataagactcttgagaagagtatataaaga-gagacaatcctcacctt 45122381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 4196063 - 4195965
Alignment:
Q  190 tattgggaaaaaccc-aagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||| ||| || ||||||||||||  ||||||||||  ||||||||| || ||||| |||| |||||||| |||  ||||||||||||    
T  4196063 tattgggaaaaaccccaaggcccacatcggatagacaagactcttgagaagagtttatcaagaggaggcaatcctcaccttacaagccggttttgtaag 4195965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 25186764 - 25186834
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaat 260  Q
    |||||| ||||||| |||||| ||||||||||||| ||||||||||| | |||||||| | ||||||||||    
T  25186764 tattggaaaaaacctaagtcccacatcggatagataagactcttgataaaagtttatatagaggagacaat 25186834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8559790 - 8559745
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttga 235  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  8559790 tattgggaaaaacccaagtcccacatcggatagataagactcttga 8559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 34248367 - 34248468
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| || |||||  |||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  34248367 agtcccacattggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 34248466  T
Q  306 tt 307  Q
    ||    
T  34248467 tt 34248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 36997196 - 36997281
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  36997196 actcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 3895131 - 3895202
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||| || |||||| ||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||||||    
T  3895131 aaaactcatgtcctatatcggatagataagactcttgataagagtttatatagaggaggcaatcctcacctt 3895202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 8559910 - 8559852
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| ||||||    
T  8559910 tattgggaaaaacccaagtcccacatcggatagat-agactcttgagaagagtatataaa 8559852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 15968540 - 15968461
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| ||| |||| |||||| |||||| ||||||||||| |||||||||  | |||||||||  ||||||||    
T  15968540 tattgggaaaaatccatgtcccacatcgtatagattagactcttgataagagtttatttagaggagacaaccctcacctt 15968461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 32931409 - 32931516
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   | ||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  32931409 agtcccacatcggatagatatcattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 32931508  T
Q  306 ttacaaca 313  Q
    || |||||    
T  32931509 tttcaaca 32931516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 8056343 - 8056273
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcac 266  Q
    |||||||||| |||| |||||||| |||| ||||||||||| |||||||||| | ||||| |||| |||||    
T  8056343 gaaaaacccatgtcccacatcggaaagataagactcttgataagagtttatatagaggaggcaatcctcac 8056273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 5496553 - 5496618
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    |||||| |||||| ||||||| |||||  ||||| |||||||||||||| |||||||||| |||||    
T  5496553 tattggaaaaaactcaagtcccacatcaaatagacgagactcttgatgaaagtttataaagaggag 5496618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 15856964 - 15857089
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaat-cggttttgtaag 287  Q
    ||||||||||||||| |||| | || ||| |||||| ||||||| ||  |||||||||||| | ||| ||||  ||||||| ||||| ||||||| ||||    
T  15856964 ttattgggaaaaacctaagttcaacgtcgaatagataagactctcgagaagagtttataaagatgaggcaatcatcaccttacaaatccggttttctaag 15857063  T
Q  288 aatgagtcagaccccaaattacaaca 313  Q
     |||||| ||  |||||||| |||||    
T  15857064 gatgagttaggtcccaaatttcaaca 15857089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 15857171 - 15857216
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttga 235  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  15857171 tattgggaaaaactcaagtcccacatcggatagataagactcttga 15857216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 8056598 - 8056482
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaat 290  Q
    ||||| |||||| || |||| ||||| ||||||| ||||||||||| || ||||||| | |||||||||| ||||  ||   || || ||||||||||||    
T  8056598 attggaaaaaacacatgtcccacatcagatagataagactcttgataagtgtttatatagaggagacaatcctcaatttcagaaccgattttgtaagaat 8056499  T
Q  291 gagtcagaccccaaatt 307  Q
    |||| || |||| ||||    
T  8056498 gagttaggcccccaatt 8056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 43599510 - 43599550
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagact 230  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  43599510 tattgggaaaaacccaagtcccacatcggatagataagact 43599550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 3895372 - 3895450
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| ||||||||| ||| |||||||||||||| ||||||||||| ||| |||||| | || || |||| ||||||||    
T  3895372 tattggaaaaaacccatgtc-tacatcggatagataagactcttgataagaatttatatagagaaggcaatcctcacctt 3895450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 21085244 - 21085137
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||   ||||||||||  |||||| || |||||||    
T  21085244 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaatgatgagttaggccccaaa 21085145  T
Q  306 ttacaaca 313  Q
    || |||||    
T  21085144 tttcaaca 21085137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 21653335 - 21653442
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||    |||||||  |||||||||| | ||||| || |||||||||| |||  |||||||||||| |||||| || | |||||    
T  21653335 agtcccacatcggatagatagtgctcttgagaagagtttatatagaggaggcacttctcaccttacaagccggttttgtaaggatgagttaggctccaaa 21653434  T
Q  306 ttacaaca 313  Q
    || |||||    
T  21653435 tttcaaca 21653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 21653812 - 21653919
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||    |||||||  | |||||||| | ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  21653812 agtcccacatcggatagatagtgctcttgagaaaagtttatacagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 21653911  T
Q  306 ttacaaca 313  Q
    ||||||||    
T  21653912 ttacaaca 21653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 22277564 - 22277639
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||||||| |||||||| | |||||||| |||  |||||||||||| |||||| |  ||||||||| |||||    
T  22277564 agagtttataaagaggagacactactcaccttacaagccggttttgtaaggatgagttaatccccaaatttcaaca 22277639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 37537206 - 37537123
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaa 274  Q
    |||||||||||| ||||||| |||||| |||||| ||||| ||||  ||||| | |||| |||||||||| | |||||| ||||    
T  37537206 attgggaaaaactcaagtcccacatcgaatagataagacttttgagaagagtatgtaaagaggagacaatccccaccttacaaa 37537123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 43984412 - 43984305
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| ||||| || | |||||| | |||  |||||||||||| |||||| || |||||||    
T  43984412 agtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccatacaagccggttttgtaaggatgagttaggccccaaa 43984313  T
Q  306 ttacaaca 313  Q
    || |||||    
T  43984312 tttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 30065983 - 30066029
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgat 236  Q
    ||||||||||||| ||||||| ||||| ||||||| |||||||||||    
T  30065983 tattgggaaaaactcaagtcccacatcagatagataagactcttgat 30066029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 23027924 - 23027823
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| ||||||||   ||||||||  |||| ||||||| ||||| || | |||||||| |||  ||||||| ||||||||||| || |||||||    
T  23027924 agtcccacataggatagatagaactcttgagaagagcttataaagaggaggcactcctcaccttacaagccggttttttaagaatgagttaggccccaaa 23027825  T
Q  306 tt 307  Q
    ||    
T  23027824 tt 23027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 39124916 - 39125020
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||| |||| |||| ||||| |   ||||||  || |||||||||||| ||||| || | |||| ||| |||  | ||||||||||||    
T  39124916 tattgggaaaaacccaggtcccacattggataaacaggactctcaataagagtttataaagaggaggcactcctcatcttacaagccagttttgtaagaa 39125015  T
Q  290 tgagt 294  Q
    |||||    
T  39125016 tgagt 39125020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 9378783 - 9378971
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||  |||||||||||| ||||| |||| ||  |||| |||  ||||||||||||    
T  9378783 tttattgggaaaaacccaagtcccacatcgaatagataagactcttgagaagagtttataaagaggaggcaatccttgccttacaagccggttttgtaag 9378882  T
Q  288 aatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     |||||| |||||||||||||||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  9378883 gatgagttagaccccaaattacaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 9378971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 13310538 - 13310351
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||| ||||||||||||||| || || |||||||||||||||||| ||||||||||||| |||||||| | ||||| |  |||| ||||||||||||     
T  13310538 ttattgagaaaaacccaagtcccacgtcagatagatgagactcttgacgagagtttataaagaggagacactcctcacttcacaaaccggttttgtaagg 13310439  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| | || ||||||||| || ||||||    
T  13310438 atgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctgtttacgcaccaagcccaaagag 13310351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 23396601 - 23396787
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||| ||||||||| ||||||||||  ||||| |||||| | ||| |||| |||||||| |||  |||||||||||| |    
T  23396601 tattgggaaaaatccaagtcccacaacggatagataagactcttgagaagagtatataaagatgaggcaatcctcaccttacaagccggttttgtaagga 23396700  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  23396701 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 23396787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 40703972 - 40703785
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||  ||| |||| ||||||||     
T  40703972 ttatttggaaaagctcaagtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagtcggatttgtaagg 40703873  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| |  ||||||||| ||| | ||||| |   ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  40703872 atgagttatgccccaaatttcaatatggtatcaacgcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 40703785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 6783030 - 6783154
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  6783030 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 6783129  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  6783130 tgagttaggccccaaatttcaacag 6783154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 33855683 - 33855806
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| | |||||||||| |||||||| | ||||||||   || ||||||||||||||    
T  33855683 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaa 33855782  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  33855783 tgagttaggccccaaatttcaaca 33855806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 31374763 - 31374907
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtc 295  Q
    |||||| |||||||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| ||||||     
T  31374763 gaaaaatccaagtcctacatcggatagataagactattgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtt 31374862  T
Q  296 agaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||||| |||| ||||| | ||||||| ||| ||||||| ||||    
T  31374863 agaccccgaatttcaacatgatattagagcttgtcgaattcaagg 31374907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 9378992 - 9379089
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||| ||||||||||||    
T  9378992 tattgggaaaaacccaagttccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaag 9379089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 23821788 - 23821665
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||||   |||||||||| || ||||| ||||||| |||||||||| ||||| ||||||| ||||| ||| | ||||||||||| |    
T  23821788 tattgggaaaaacccaagtttcacatcggataaataagacttttgatgacagtttataaagaggaggcaattcttaccttacaagttggttttgtaagga 23821689  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  23821688 tgagttaggccccaaatttcaaca 23821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 305
Target Start/End: Complemental strand, 35866751 - 35866636
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| | ||| | |||| |||| ||| |||  |||||||||||| |    
T  35866751 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttatatagagggggcaatactcaacttacaagccggttttgtaagga 35866652  T
Q  290 tgagtcagaccccaaa 305  Q
    ||||| || |||||||    
T  35866651 tgagttaggccccaaa 35866636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 16564886 - 16565036
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||| ||||| || | ||||||||   || ||||||| |||| |    
T  16564886 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16564985  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||| || ||  ||||| ||||| ||||| ||| ||||||||||| ||||    
T  16564986 tgagttaggccttaaatttcaacatggtatcagagcttatcgaattcaagg 16565036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 16600776 - 16600626
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||| ||||| || | ||||||||   || ||||||| |||| |    
T  16600776 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16600677  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||| || ||  ||||| ||||| ||||| ||| ||||||||||| ||||    
T  16600676 tgagttaggccttaaatttcaacatggtatcagagcttatcgaattcaagg 16600626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 39808711 - 39808593
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  | ||||||| ||    
T  39808711 tttattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccagttttgtgag 39808612  T
Q  288 aatgagtcagaccccaaat 306  Q
     |||||| || ||||||||    
T  39808611 gatgagttaggccccaaat 39808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 6813188 - 6813067
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| || | |||| ||  |||  ||||||||| || |||    
T  6813188 ttgggaaaaacacaagtcccacatcggatagatgggactcttgatgagagtttataaagaggaggcactcctcaactcacaagccggttttgtgaggatg 6813089  T
Q  292 agtcagaccccaaattacaaca 313  Q
    ||| || ||||||||| |||||    
T  6813088 agttaggccccaaatttcaaca 6813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 6782816 - 6782912
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||    
T  6782816 tttattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgt 6782912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 6751822 - 6751743
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||| || | |||||||    
T  6751822 ttattgggaaaaacccaagtcccacatcggatagatgagattcttgatgagagtttacaaagaggaggcactcctcacct 6751743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 16565090 - 16565169
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| || | ||||||||    
T  16565090 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcacctt 16565169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 16600572 - 16600493
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| || | ||||||||    
T  16600572 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcacctt 16600493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 31357787 - 31357708
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  31357787 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcacctt 31357708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 6751617 - 6751539
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| || | |||||||    
T  6751617 tattgggaaaaacccaagtcccaaatcggatagatgagactcttgatgagagtttacaaagaggaggcactcctcacct 6751539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 29252568 - 29252662
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||    
T  29252568 tattgggaaaaacccaagtcccacgtcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgt 29252662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 1661287 - 1661178
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| | ||||||||  |||||||||||| ||||| || | |||||||| |||  ||||||||||||||||||| || |||||||    
T  1661287 agtcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagttaggccccaaa 1661188  T
Q  306 ttacaacagg 315  Q
    || |||||||    
T  1661187 tttcaacagg 1661178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 40703764 - 40703647
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| |||||| |||||||| |||||| ||| |||||||||||||||||| |||||||| |||||||| | |||||||  |||  |||||||||||| |    
T  40703764 tattgagaaaaaaccaagtcccacatcgaataaatgagactcttgatgagactttataaagaggagacactcctcacctcacaagccggttttgtaagga 40703665  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||| ||||    
T  40703664 tgagttaggcccctaatt 40703647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 33833941 - 33834021
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||| ||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  33833941 ttattggaaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcacctt 33834021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 365
Target Start/End: Complemental strand, 38948525 - 38948350
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||  || |||| |||||||| |||| |||||||| || |||||||||| | ||||||||||||||||||||  ||| | |||| |||| |    
T  38948525 tattgggaaaaaatcatgtcccacatcggaaagataagactctttataagagtttatatagaggagacaattctcaccttgtgaattgatttt-taagga 38948427  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||| ||||| | |||| ||  | ||||| ||| ||| ||||||| |||| |||||||||| ||||||| ||||||    
T  38948426 tgagttagacctccaatttcattatggtatcagagcttgtcgaattcaagggctgcctaaacctattcacacaccaa 38948350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 6813395 - 6813211
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||| |||||||||  |||| |||||||| ||||||||||||||||||||||| ||||| || | |||||||  |||  ||||||||| || |    
T  6813395 tattgggaaaaccccaagtcccgcatcagatagatgggactcttgatgagagtttataaagaggaggcactcctcacctcacaagccggttttgtgagga 6813296  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
      ||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| |  |||  || |||||||||||||| || ||||||    
T  6813295 caagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccacct--acatattcacgcaccaagcccaaagag 6813211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 22841044 - 22841123
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| | |||||||||| | |||||||||| ||||||||    
T  22841044 tattgggaaaaacccatgccctacatcggatagataagactcttggtaagagtttatatagaggagacaatcctcacctt 22841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 5775873 - 5775939
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||| |||||    
T  5775873 ttattgggaaaaactcaagtcccacatcgcatagatgagactcttaatgagagtttataaagaggag 5775939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 2179646 - 2179743
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttga-tgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaa 286  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||   |||||||||||| |||||||||| |||||||| |||| | |||||||||    
T  2179646 tattgggaaaaattcaagtcccacatcggatagataagactcttgagaaagagtttataaagaggagacaatcctcaccttacaaaccagttttgtaa 2179743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 48113989 - 48114053
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||    
T  48113989 tattgggaataacccaagtcccacatcggatagataagactcttgataagagtttataaagagga 48114053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 258423 - 258571
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| || || ||||| || | ||||| |  |||   |||||||| |  |    
T  258423 tattgggaaaaacccaagtcc--catcggatagatgagactcttgatgagagttgatgaagaggaggcactcctcacttcacaagctggttttgtgatga 258520  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| ||||    
T  258521 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagg 258571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 4258112 - 4258033
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||| || ||||| || | ||||||||    
T  4258112 tattgggaaaaacccaagtctcacatcggatagataagactcttgataagagtttatcaataggaggcactcctcacctt 4258033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 8681883 - 8682026
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||| | ||| ||||  ||| | |  || |||||||||||||||||||| |    
T  8681883 aaaaatccaagtcccacatcagatagataagactcttgataagagtttataaagaagaggcaatcttcaacatataagtcggttttgtaagaatgagtta 8681982  T
Q  297 gaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    | || |||||| ||||| ||||| ||| ||| ||||||| ||||    
T  8681983 ggcctcaaatttcaacatggtatcagagcttgtcgaattcaagg 8682026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 33834147 - 33834226
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| ||| |||| ||||| ||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  33834147 tattgggaaaaatccatgtcccacatcagatagataagactcttgataagagtttatatagaggagacaatcctcacctt 33834226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 43565960 - 43566113
Alignment:
Q  194 gggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgag 293  Q
    ||||||||| ||||| | | |||||||| |  ||||| ||||||||||||||| |||||| |||| | ||||||||  ||  || ||||||||||||| |    
T  43565960 gggaaaaactcaagtaccatatcggataaacaagacttttgatgagagtttat-aaaaggtgacactcctcaccttataagccgattttgtaagaatggg 43566058  T
Q  294 tcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgccta 347  Q
    | |||||||||||| ||||| ||||||||| ||| ||||||| || | |||||||    
T  43566059 ttagaccccaaatttcaacatggtattagagcttgtcgaattcaaaggctgccta 43566113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 23390582 - 23390639
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttata 247  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||    
T  23390582 tattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 23390639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 33855473 - 33855541
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    ||||||||||||||||||||| | ||||||||||| |||||| |||| | |||||||||| ||||||||    
T  33855473 tattgggaaaaacccaagtcccatatcggatagataagactcgtgataatagtttataaagaggagaca 33855541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 36621019 - 36621130
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||| |||||||| ||||  || | |||| ||  |||| |||||||||||| |||||     
T  36621019 ggaaaaactcaagtcttacatcggat-gatgagactcttgatgagattttataaagaggatgcactcctcatctcacaaaccggttttgtaaggatgaga 36621117  T
Q  295 cagaccccaaatt 307  Q
     ||| ||||||||    
T  36621118 tagatcccaaatt 36621130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 43366399 - 43366467
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    |||||||||||| |||| ||| |||||| || || ||||||||||||||||||||||||| ||||||||    
T  43366399 tattgggaaaaatccaaatcccacatcgaattgacgagactcttgatgagagtttataaagaggagaca 43366467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 4258316 - 4258261
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagttta 245  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||    
T  4258316 tattgggaaaaactcaagtcccacatcggatagataagactcttgataagagttta 4258261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 10903389 - 10903314
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||    
T  10903389 tattgggaaaaacacatgtcccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctca 10903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 10903596 - 10903521
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||    
T  10903596 tattgggaaaaactcatgtcccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctca 10903521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 23396814 - 23396929
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    |||| |||||||| ||| |  |||||| ||||||||||| ||||| |||||| ||||| ||||  ||| ||| |||  |||||||||||| |||||| ||    
T  23396814 aaaatccaagtcccacaacatatagataagactcttgataagagtatataaagaggaggcaatcatcaacttacaagccggttttgtaaggatgagttag 23396913  T
Q  298 accccaaattacaaca 313  Q
    |||||||||| |||||    
T  23396914 accccaaatttcaaca 23396929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 5266351 - 5266461
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||| |||| ||||| | ||||  |||| |||| |||   || |||||||||||| |    
T  5266351 tattgggaaaaacccatgtcccacatcagatagataagactcttgataagagattatatagaggatccaatcctcaacttatgaaccggttttgtaagga 5266450  T
Q  290 tgagtcagacc 300  Q
    ||||| |||||    
T  5266451 tgagttagacc 5266461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 47856095 - 47856038
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |||||||||||| |||||    
T  47856095 aaaacccaaatcccacatcggatagataagactcttgataagagtttataaagaggag 47856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 1663701 - 1663593
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaa-aggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaa 304  Q
    ||||| |||||||||||||   ||||||||  ||||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||    
T  1663701 agtcccacatcggatagatagcactcttgagaagagtttataaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaa 1663602  T
Q  305 attacaaca 313  Q
    ||| |||||    
T  1663601 atttcaaca 1663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 2232087 - 2232211
Alignment:
Q  190 tattgggaaaaacc-caagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||| ||||||| |||||||| |||||||||||| | ||||||||| |||||||||| | ||||| |||| |||||||  |||  || |||||||||     
T  2232087 tattggaaaaaacctcaagtcctgcatcggatagataaaactcttgataagagtttatatagaggaggcaatcctcacctcacaagccgattttgtaagg 2232186  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
     ||||| | |||| ||||| |||||    
T  2232187 ttgagttataccctaaatttcaaca 2232211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 29780176 - 29780256
Alignment:
Q  227 gactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||  |||||||||||| |||||||| | |||||||| ||| |||||||| |||| |||||| || |||||||||    
T  29780176 gactcttgagaagagtttataaagaggagacactcctcaccttacaagtcggttttataaggatgagttaggccccaaatt 29780256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 36237793 - 36237897
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||| ||||| |||||||||| |||| ||||| ||  |||||||||| |||||||||||| ||||| || | ||| |||| |||  ||||||||||||     
T  36237793 ttattcggaaacacccaagtcccacattggatacataggactcttgataagagtttataaagaggaggcactcctctccttacaagccggttttgtaagg 36237892  T
Q  289 atgag 293  Q
    |||||    
T  36237893 atgag 36237897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 37272141 - 37272053
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| ||||||| |||||  |||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  37272141 agtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 37272053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 7135333 - 7135238
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||||||  |||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||  |||||| || |||||||||    
T  7135333 acatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaagatgagttaggccccaaatt 7135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 23821583 - 23821540
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactctt 233  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  23821583 tattgggaaaaacccaagtcccacataggatagatgagactctt 23821540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 6214356 - 6214302
Alignment:
Q  181 aggattctttattgggaaaaacccaagtcctacatcggatagatgagactcttga 235  Q
    |||||||  ||||||||||||||||||||| ||||||||||||  ||||||||||    
T  6214356 aggattcgatattgggaaaaacccaagtcccacatcggatagacaagactcttga 6214302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 29645829 - 29645886
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| |||||||||||  ||||||||| ||||||| |||| ||||||||    
T  29645829 acatcggatagataagactcttgatatgagtttatataaaggaggcaatcctcacctt 29645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 39808553 - 39808460
Alignment:
Q  213 catcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaat 306  Q
    |||||||||||  ||||||||||  |||||||||||| ||||| |||| ||||||||  ||  ||||||||| || |||||| || ||||||||    
T  39808553 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttaaaagccggttttgtgaggatgagttaggccccaaat 39808460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 43384376 - 43384279
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacccca 303  Q
    ||||| |||||||||||||  || ||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||    
T  43384376 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcccca 43384279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 21557007 - 21557067
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||| |||||| ||||||| |||||||||||||   ||||||||| ||||||||||||    
T  21557007 ttattggaaaaaactcaagtcccacatcggatagatagaactcttgataagagtttataaa 21557067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 27585264 - 27585352
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||  || ||||||  |||||||||||||||||| || | |||||| | |||  |||||||||||| ||||||    
T  27585264 agtcccacatcggatagataggattcttgagaagagtttataaaaaggaggcactcctcaccgtacaagccggttttgtaaggatgagt 27585352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 28910072 - 28910148
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| ||||||    
T  28910072 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttagcccccaaatttcaacag 28910148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 40137808 - 40137704
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||| |||||||||| || |||| |||||||   ||||||| || |||||||||||| | |||||| | |||||||| | |  |||||||||||| |    
T  40137808 tattgggcaaaacccaagccccacattggatagacaggactcttaataagagtttataaagaagagacactcctcaccttacgagccggttttgtaagga 40137709  T
Q  290 tgagt 294  Q
    |||||    
T  40137708 tgagt 40137704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 12578556 - 12578449
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||| ||| ||||| || | ||| |||| ||| ||| ||||||||| |||||| ||||||||||    
T  12578556 agtcccacatcggttagataggaagcttgatcagagtttagaaagaggaggcactcctcgccttacaattcgattttgtaaggatgagttagaccccaaa 12578457  T
Q  306 ttacaaca 313  Q
    || |||||    
T  12578456 tttcaaca 12578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 24426752 - 24426858
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    ||||||| |||||| || |||||||||| | ||||||||| |||||||||||| || ||| | | ||||||||  ||| | ||||| ||||| ||||| |    
T  24426752 aaaaaccaaagtcccacgtcggatagataa-actcttgataagagtttataaagagaagatattcctcaccttataaaccagttttataagagtgagtta 24426850  T
Q  297 gaccccaa 304  Q
    ||||||||    
T  24426851 gaccccaa 24426858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 29646056 - 29646135
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||  || |||| |||| |||||||| |||||||||||  ||||||||| | ||||| |||| ||||||||    
T  29646056 tattgggaaaaattcatgtcccacattggatagataagactcttgataggagtttatatagaggaggcaatcctcacctt 29646135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 43288278 - 43288373
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||| |||||  |||||||||| |||||||||||| ||||| || | |||| ||| |||  ||||||||||||  ||||| || |||||||||    
T  43288278 acatcggttagataggactcttgataagagtttataaagaggaggcactcctcatcttacaatccggttttgtaagggtgagttaggccccaaatt 43288373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 43288546 - 43288641
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||| | ||| ||||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| || ||| || |||||||||    
T  43288546 acatcggtttgataagactcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggattagttaggccccaaatt 43288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 30768410 - 30768488
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||| |||||||| || |||| ||||||||||||| ||||||||||| | | |||||| | ||||||| || |||||||    
T  30768410 tattaggaaaaactcatgtcccacatcggatagataagactcttgataataatttatatagaggagacgatcctcacct 30768488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 34748786 - 34748880
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacc 300  Q
    ||||| |||||||||||||  || ||||||  |||||||||||| ||||| || | |||||| | |||  |||||||||||| |||||| |||||    
T  34748786 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtaaggatgagttagacc 34748880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 257363 - 257262
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   | ||||||  |||||||||||| ||||| || | |||||||| | |  |||||||||||| |||||| || |||||||    
T  257363 agtcccacatcggatagatattattcttgagaagagtttataaagaggaggcactcctcaccttactagccggttttgtaaggatgagttaggccccaaa 257264  T
Q  306 tt 307  Q
    ||    
T  257263 tt 257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 288
Target Start/End: Original strand, 14691081 - 14691162
Alignment:
Q  207 gtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||| ||||||| |||||  ||| |||||| |||||||||||| |||||||| | |||||||| |||  | |||||||||||    
T  14691081 gtcccacatcggttagataggacgcttgataagagtttataaagaggagacactcctcaccttacaagccagttttgtaaga 14691162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 40703479 - 40703406
Alignment:
Q  234 gatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||||||||| ||||| || | |||||||  |||  |||||||||||| |||||| || |||||||||    
T  40703479 gatgagagtttataaagaggaggcactcctcacctcacaagccggttttgtaaggatgagttaggccccaaatt 40703406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 12518241 - 12518165
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| |||||||||||| ||| | || | ||| |||| ||| ||||||||||||| |||||| || |||||||||    
T  12518241 cttgatcagagtttataaagagggggcactcctcgccttacaattcggttttgtaaggatgagttaggccccaaatt 12518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 34590556 - 34590644
Alignment:
Q  226 agactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    |||||||| || |||||||||||| ||||| || | ||||||||   || |||||||||||| |||||| |  ||||||||| ||||||    
T  34590556 agactcttcataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaagccccaaatttcaacag 34590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 36092695 - 36092599
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacccc 302  Q
    ||||| |||||||||||||  || ||||||  |||||||||| | ||||| || | |||||||| |||   ||||||||||| |||||| |||||||    
T  36092695 agtcccacatcggatagataggattcttgagaagagtttatagagaggaggcactcctcaccttacaagctggttttgtaaggatgagttagacccc 36092599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 43167981 - 43167881
Alignment:
Q  214 atcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||||||   ||||||||  |||||||||||| ||||| |||| ||||||||   |  |||||||||||| |||||| |  ||||||||| |||||    
T  43167981 atcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatgagccggttttgtaaggatgagttaagccccaaatttcaaca 43167882  T
Q  314 g 314  Q
    |    
T  43167881 g 43167881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 43384042 - 43383954
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||  || |||||   |||||||||||| ||||| || | ||| |||| |||| |||||||||||| ||||||    
T  43384042 agtcccacatcggatagataggagtcttgcaaagagtttataaagaggaggcactactccccttacaaaccggttttgtaaggatgagt 43383954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 48116367 - 48116291
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| |||||||||||| |||| ||| | |||||||| |||  |||||||||||| |||||| || | |||||||    
T  48116367 cttgatcagagtttataaagaggacacactcctcaccttacaagccggttttgtaaggatgagttaggctccaaatt 48116291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 49040580 - 49040624
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggaga 256  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||    
T  49040580 acatcggatagataagactcttgataagagtttatatagaggaga 49040624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 365
Target Start/End: Complemental strand, 18914484 - 18914304
Alignment:
Q  186 tctttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgta 285  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||||  | ||||||||||||||||||||| |||||||| |||   |||||||||    
T  18914484 tctttattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcaccttacaagctggttttgta 18914385  T
Q  286 agaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||||||| || ||||||||| ||||| |||||  || ||| ||||||| |||| | |||||||||||||||||||||||    
T  18914384 agaatgagttaggccccaaatttcaacatggtatcggagcttgtcgaattcaagggccgcctaaacttattcacgcaccaa 18914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 189 - 375
Target Start/End: Original strand, 13413575 - 13413761
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| |||||  |||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  13413575 ttattgggaaaaacccaagtcccacatcaaatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 13413674  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| ||||||||||||||| |||||||||||||| || ||||||    
T  13413675 atgagttaggccccaaatttcaacatggtatcagagctt-tcgaattcaaggactgcctaaacctattcacgcaccaagcccaaagag 13413761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 38376723 - 38376909
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| |||||||||| |||||||| |||  |||||||||||| |    
T  38376723 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagga 38376822  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||||||||| ||||| ||| ||| ||||| | |||| | |||||||| |||||| |||| || || ||||||    
T  38376823 tgagttaggccccaaattacaacatggtatcagagcttgtcgaagtcaagggccgcctaaacctattcatgcactaagcccaaagag 38376909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 20720663 - 20720476
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||| ||||||| ||||| ||||||| ||| ||||||| ||||||| |||||||||| || | ||||| || |||  ||||||||||||     
T  20720663 ttattgggaaaaactcaagtcccacatcagatagataagattcttgataagagtttgtaaaaaggaggcactcctcactttacaagccggttttgtaagg 20720564  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| ||||||||||||  |||| ||||| ||| ||||||||||| |||| | ||||||||||||||||||||||| || ||||||    
T  20720563 atgagttagaccccaaattttaacatggtatcagagcttatcgaattcaagggccgcctaaacttattcacgcaccaagcccaaagag 20720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 365
Target Start/End: Complemental strand, 40169147 - 40168977
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtc 295  Q
    ||||||||||||||| ||||| ||||||| ||||||||||  ||||| |||||| ||||| ||||||||||||| |||  |||||||||||| ||||||     
T  40169147 gaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccggttttgtaaggatgagtt 40169048  T
Q  296 agaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||||||    
T  40169047 aggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaa 40168977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 43490575 - 43490389
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| || ||||||| |||||||| |||  |||||||||||| |    
T  43490575 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagagaagacaatactcaccttccaagccggttttgtaagga 43490476  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || |||| |||| ||||| ||||| ||| ||| | ||||| |||| | |||||||| |||||||||||||| || ||||||    
T  43490475 tgagttaggcccccaatttcaacatggtatcagagcttgttgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 43490389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 192 - 380
Target Start/End: Complemental strand, 3015731 - 3015544
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||  ||||||||||||  ||||||||||||  ||    
T  3015731 ttgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcaccttgcaagccggttttgtaaggttg 3015632  T
Q  292 agtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagagagatg 380  Q
    ||| || ||| ||||| ||||| ||||| ||| ||| ||||||| |||| |  |||  || |||||||||||||| || |||||| ||||    
T  3015631 agttaggccctaaatttcaacatggtatcagagcttgtcgaattcaagggccacct--acctattcacgcaccaagcccaaagagtgatg 3015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 18914273 - 18914149
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||  | ||||||||||||||||||||| |||||||| ||| | |||||||||||||    
T  18914273 tattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcaccttacaagttggttttgtaagaa 18914174  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  18914173 tgagttaggccccaaatttcaacag 18914149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 197 - 380
Target Start/End: Original strand, 34457095 - 34457279
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||||||||||| | ||||||||||  ||||||||||  |||||||||||| ||||  |||| |||||||| |||  |||||||||||| |||||| |    
T  34457095 aaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagtta 34457194  T
Q  297 gaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagagagatg 380  Q
    | ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || |||||| ||||    
T  34457195 ggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagagtgatg 34457279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 28358147 - 28358030
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||| |||||||| |||  |||||||||||| |    
T  28358147 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagga 28358048  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||||||||    
T  28358047 tgagttaggccccaaatt 28358030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 35527092 - 35526976
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |||||| ||    
T  35527092 aaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 35526993  T
Q  298 accccaaattacaacag 314  Q
     ||||||||||||||||    
T  35526992 gccccaaattacaacag 35526976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 3015529 - 3015406
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||  ||||| ||||||  ||||||||||||      
T  3015529 tattgggaaaaacccaagccccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcacattgcaagccggttttgtaaggt 3015430  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  3015429 tgagttaggccccaaatttcaaca 3015406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 34457295 - 34457418
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||  ||||||||||||| |||  |||||||||||| |    
T  34457295 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggatgcaattctcaccttacaagccggttttgtaagga 34457394  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  34457395 tgagttaggccccaaatttcaaca 34457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 3762896 - 3763021
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||  |||||||||||| ||||| ||||  ||||||| |||  ||||||||||||    
T  3762896 tttattgggaaaaacccatgtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcttcaccttacaagccggttttgtaag 3762995  T
Q  288 aatgagtcagaccccaaattacaaca 313  Q
     |||||| || ||||||||| |||||    
T  3762996 gatgagttaggccccaaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 48422 - 48237
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||   |||||  ||||||||||  | |||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  48422 ttattgggaaaaacccaagtcccacatt--atagacaagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 48325  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || |||| |||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  48324 atgagttaggcccccaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 48237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 24125054 - 24125177
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||  ||||| |||||| |||||  ||| |||||||| |||  |||||||||||| |    
T  24125054 tattgggaaaaacccaagtcctacatcggataaacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaagga 24125153  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||||||||| |||||    
T  24125154 tgagttagaccccaaatttcaaca 24125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 35527388 - 35527262
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactctt-gatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||||||||||||||||| ||||||||||| | |||||||| ||  |||||||| ||| ||||| |||| |||||||| |||  ||||||||||||    
T  35527388 ttattgggaaaaacccaagtcccacatcggatagctaagactcttagagaagagtttacaaagaggaggcaatcctcaccttacaagccggttttgtaag 35527289  T
Q  288 aatgagtcagaccccaaattacaacag 314  Q
     |||||| || ||||||||||||||||    
T  35527288 gatgagttaggccccaaattacaacag 35527262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 48216 - 48099
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  48216 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 48117  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||| ||||    
T  48116 tgagttaggcccccaatt 48099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 2908674 - 2908557
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  | |||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  2908674 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 2908575  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| ||| ||||||||    
T  2908574 tgagttagatcccaaatt 2908557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 43490368 - 43490273
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgta 285  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||||||||  ||||||| |||  ||||||||||    
T  43490368 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcttcaccttacaagccggttttgta 43490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 365
Target Start/End: Complemental strand, 2908881 - 2908705
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||| ||||||  ||||| ||||  | |||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  2908881 tattgggaaaaatccaagtcccacatcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 2908782  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| ||||    ||||||| ||||||| ||||||    
T  2908781 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggtcacctaaacctattcacacaccaa 2908705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 28156028 - 28156211
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||      |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  28156028 tattgggaaaaacccaagtcccacatcggatagacaagactc------agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 28156121  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaa---acttattcacgcaccaaacctaaagag 375  Q
    ||| | || ||||||||| ||||| | ||| ||||||| ||||||| |||| | ||||||   || |||||||||||||| || ||||||    
T  28156122 tgaattaggccccaaatttcaacatgatatcagaacttgtcgaattcaagggccgcctaaaccacctattcacgcaccaagcccaaagag 28156211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 39268009 - 39268089
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| || | ||||||||    
T  39268009 ttattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcacctt 39268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 15287045 - 15287168
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||  || || ||| || ||||| |||| |||||||| |||  |||||||||||  |    
T  15287045 tattgggaaaaacccaagtcctatatcggatagataagactcttgagaagggtatattaagaggaggcaatcctcaccttacaagccggttttgtaatga 15287144  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||| ||||| |||||    
T  15287145 tgagttagacccaaaatttcaaca 15287168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 18107590 - 18107532
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataa 248  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  18107590 tattgggaaaaacccaagtcccacatcggatagataagactcttgatgagagtttataa 18107532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 30330643 - 30330745
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    |||||||||| |||||||| ||||||||||||| |||||||  || |||||||||| | ||||| |||| |||||||| |||| |||||||||||| |||    
T  30330643 ttgggaaaaatccaagtcccacatcggatagataagactctgaattagagtttatatagaggaggcaatcctcaccttacaaaccggttttgtaaggatg 30330742  T
Q  292 agt 294  Q
    |||    
T  30330743 agt 30330745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 36878318 - 36878397
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||| |||||| ||||| ||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||    
T  36878318 tattgggaaaaaccaaagtcccacatcagatagataagacttttgataagagtttataaacaggagacaatcctcacctt 36878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 38131772 - 38131879
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| |||||||| | |||||||| |||  |||||||||||| |||||| || |||||||    
T  38131772 agtcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 38131871  T
Q  306 ttacaaca 313  Q
    || |||||    
T  38131872 tttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 18107825 - 18107939
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| |||||| || ||| ||||||||||| ||| |||||||| ||||| || | ||||||||  ||| |||||||||||| |    
T  18107825 tattgggaaaaacccaattcccacatcgaatcgataagactcttgataagaatttataaagaggaggcactcctcaccttataaaccggttttgtaagga 18107924  T
Q  290 tgagtcagaccccaa 304  Q
    ||| | |||||||||    
T  18107925 tgaattagaccccaa 18107939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 32501205 - 32501271
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  32501205 ttgggaaaaatccaagtcccacatcggatagataagactcttgataagagtttgtaaaaaggagaca 32501271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 11632423 - 11632548
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| ||||| |||||||| ||||||||||||  ||||||||||  |||||||||||| | ||| |||| ||||||||  ||  |||||||||||| |    
T  11632423 tattggaaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttataagccggttttgtaagga 11632522  T
Q  290 tgagtcagaccccaaattacaacagg 315  Q
    |||||  | ||||||||| |||||||    
T  11632523 tgagttgggccccaaatttcaacagg 11632548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 37656844 - 37656731
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||| ||||||  ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  37656844 tattggaaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 37656745  T
Q  290 tgagtcagacccca 303  Q
    ||||| || |||||    
T  37656744 tgagttaggcccca 37656731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 37781956 - 37781843
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| ||||||  ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||   ||||||||||| |    
T  37781956 tattgggaaaaactcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagctggttttgtaagga 37781857  T
Q  290 tgagtcagacccca 303  Q
    ||||| || |||||    
T  37781856 tgagttaggcccca 37781843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 395359 - 395463
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||| |||||||||| |||| ||||||||  || ||||||| |||||||||||| ||||| || | || ||||| ||  |||||||||||||||    
T  395359 tattgggaaagacccaagtcccacattggatagataggattcttgataagagtttataaataggaggcactcctaaccttacatgtcggttttgtaagaa 395458  T
Q  290 tgagt 294  Q
    |||||    
T  395459 tgagt 395463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 39268218 - 39268322
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||  |||| || | ||||||||   || ||||||| |||| |    
T  39268218 tattgggaaaaacccaagtcccacatcggatagataaaactcttgataagagtttataaattggaggcactcctcaccttatgaaccggttttttaagga 39268317  T
Q  290 tgagt 294  Q
    |||||    
T  39268318 tgagt 39268322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 36308034 - 36307885
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||  ||||| | ||||||||||||| ||||||||||  |||||||||||| ||||| |||| ||||||||||||  ||| |||||||| |    
T  36308034 tattggaaaaaattcaagttccacatcggatagataagactcttgaa-agagtttataaagaggagtcaatcctcaccttgcaagccggatttgtaagga 36307936  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||| |  || |||||| ||||| ||||| ||| ||| ||||||| ||||    
T  36307935 tgagttaagcctcaaatttcaacatggtatcagagcttgtcgaattcaagg 36307885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 22732849 - 22732752
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||| |||||| |||| ||  |||||||||||||||||||| ||||||||||||||||| || ||||| | |||||||   || |||||||||||||    
T  22732849 tattgagaaaaatccaaatctcacatcggatagatgagactcctgatgagagtttataaagagaagacactcctcacctcaaaagtcggttttgtaag 22732752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 13844021 - 13844129
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| || |||||||||| |||| |||||||||||| |||||| || ||| |||    
T  13844021 agtcccacatctgatagatagtactcttgagaagagtttataaagaggaggcacttctcaccttacaaaacggttttgtaaggatgagttaggccctaaa 13844120  T
Q  306 ttacaacag 314  Q
    || ||||||    
T  13844121 tttcaacag 13844129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 28156231 - 28156354
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||| |   | ||||||||  |||||||||||| ||||| |||| |||||||| |||   |||| |||||| |    
T  28156231 tattgggaaaaacccaagtcccacatcggatggcaaa-actcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttatgtaagga 28156329  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| ||| |||||||| ||||||    
T  28156330 tgagttagaacccaaatttcaacag 28156354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 10668352 - 10668431
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||| |||||  |||||| | ||||||||| |||||||| ||| |||||||| | ||||||||    
T  10668352 tattgggaaaaacccaagtcccacatcaaatagataaaactcttgataagagtttacaaagaggagacactcctcacctt 10668431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 17135519 - 17135589
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||| ||||||| |||||||||| || ||||||||||| |||||||||||| |||||||| | |||||||    
T  17135519 aaaactcaagtcccacatcggataaataagactcttgataagagtttataaagaggagacactcctcacct 17135589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 18873305 - 18873227
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||| |||| |||| ||||||||||||| ||||| ||||| |||||||||| | ||||| |||| ||||||||    
T  18873305 attgggaaaagcccatgtcccacatcggatagataagactattgataagagtttatatagaggaggcaatcctcacctt 18873227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 4563805 - 4563724
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||| || |||  ||||||||||||| ||||| ||||| |||||||| | | |||||||||| ||||||||    
T  4563805 tttattgggaaaaactcatgtctcacatcggatagataagacttttgataagagtttacatagaggagacaatcctcacctt 4563724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 17130096 - 17130036
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||||||||||||||||| |||||||||     |||||||||||||||||||||||| |||||    
T  17130096 tattgggaaaaacccaagtcccacatcggat-----agactcttgatgagagtttataaataggag 17130036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 29432420 - 29432521
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| || |||||  |||||||||| |||||||||||| ||||| || |||||||||| |||  |||||||||||| |||||| || || ||||    
T  29432420 agtcccacattggttagataggactcttgataagagtttataaagaggaggcacttctcaccttacaagccggttttgtaaggatgagttaggccacaaa 29432519  T
Q  306 tt 307  Q
    ||    
T  29432520 tt 29432521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 37995730 - 37995629
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  37995730 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 37995631  T
Q  306 tt 307  Q
    ||    
T  37995630 tt 37995629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 35527202 - 35527114
Alignment:
Q  278 gttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    |||||||||| ||| || || ||||||||||||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||||||    
T  35527202 gttttgtaaggatgtgttaggccccaaattacaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaa 35527114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 873792 - 873685
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||| | ||||| || | |||||||| |||   ||||||||||| |||||| || |||||||    
T  873792 agtcccacatcggatagataggactcttgagaagagtttatagagaggaggcattcctcaccttacaagcaggttttgtaaggatgagttaggccccaaa 873693  T
Q  306 ttacaaca 313  Q
    || |||||    
T  873692 tttcaaca 873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 1028189 - 1028082
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||| ||||||||| |  |||||| || |||||||    
T  1028189 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaaaccggttttgtgacgatgagttaggccccaaa 1028090  T
Q  306 ttacaaca 313  Q
    || |||||    
T  1028089 tttcaaca 1028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 5128025 - 5127946
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| ||||| |||||| ||||||||||||||  || |||||||  ||||||||||||||||||  ||| ||||||||    
T  5128025 tattggaaaaaatccaagttctacatcggatagacaaggctcttgagaagagtttataaaaaggaggtaatcctcacctt 5127946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 2716538 - 2716652
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||| |||||||||| | || ||||| ||  |||||||||| |||||||||||  ||||| || | ||||||||  ||  |||||||||||| |    
T  2716538 tattgggaaatacccaagtcccagattggataaatatgactcttgataagagtttataaggaggaggcactcctcaccttataagccggttttgtaagga 2716637  T
Q  290 tgagtcagaccccaa 304  Q
    ||||| || ||||||    
T  2716638 tgagttaggccccaa 2716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 4296779 - 4296654
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagat--gagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||| |||||||||||||  || | ||||||||  |||||||||||  ||||| |||||| ||||| |||| |||||||| ||| || |||| |||||    
T  4296779 tattggaaaaaacccaagtctcaccttggatagataagagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagtcagtttggtaag 4296680  T
Q  288 aatgagtcagaccccaaattacaaca 313  Q
     |||||| |||||  ||||| |||||    
T  4296679 gatgagttagacctaaaatttcaaca 4296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 13413782 - 13413823
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactc 231  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  13413782 tattgggaaaaacccaagtcccacatcggatagataagactc 13413823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 29008064 - 29008121
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttata 247  Q
    |||||||||||||||| || | ||||||||||||| |||||||||||  |||||||||    
T  29008064 tattgggaaaaacccatgttccacatcggatagataagactcttgataggagtttata 29008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 40168949 - 40168848
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    ||||| ||||||| ||||||||||  ||||| |||||| ||||| |||| |||| ||| |||   ||||||||||| |||||| || ||||||||| |||    
T  40168949 acatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcatcttacaagctggttttgtaaggatgagttaggccccaaatttcaa 40168850  T
Q  312 ca 313  Q
    ||    
T  40168849 ca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 22196649 - 22196561
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| |||||||| |  ||||| | |||  |||||||||||| ||||||    
T  22196649 agtcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagt 22196561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 24994109 - 24994185
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| ||||||    
T  24994109 agagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaacag 24994185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 35527247 - 35527199
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagttt 244  Q
    ||||||||||||||| ||||||||||||| ||||||||||  |||||||    
T  35527247 gaaaaacccaagtcccacatcggatagataagactcttgagaagagttt 35527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 38663276 - 38663356
Alignment:
Q  227 gactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||| |||||||||||| ||||| || |  ||||||| |||  |||||||||||| |||||| || |||||||||    
T  38663276 gactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaaggatgagttaggccccaaatt 38663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 13843705 - 13843812
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| |  | |||||||| |||  |||||||||||| |||||| || |||||||    
T  13843705 agtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcgctcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 13843804  T
Q  306 ttacaaca 313  Q
    || |||||    
T  13843805 tttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 12965317 - 12965235
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||||||| ||||  || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  12965317 cttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 15286845 - 15286963
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagttta-taaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||| |||||||  ||||||||||||| ||||||||||  ||||| || | || ||||  |||| ||||| || |||   |||||||||||     
T  15286845 tattgggaaaaatccaagtctcacatcggatagataagactcttgagaagagtatatttaagaggatgcaatcctcactttacaagctggttttgtaagg 15286944  T
Q  289 atgagtcagaccccaaatt 307  Q
    |||| | ||||||||||||    
T  15286945 atgaattagaccccaaatt 15286963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 30870992 - 30870918
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| | | ||||||||||||| ||| ||||||  |||||||||||| ||||  |||| ||||||||    
T  30870992 ggaaaaacccaaattccacatcggatagataagattcttgagaagagtttataaagaggaagcaatcctcacctt 30870918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 1892175 - 1892098
Alignment:
Q  217 ggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||||||  |||||||||||||| |||||||| ||||| |  | |||||||| |||  |||||||||||| ||||||    
T  1892175 ggatagataggactcttgatgagaatttataaagaggaggccctcctcaccttacaagccggttttgtaaggatgagt 1892098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 6918988 - 6918927
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaacaggtattagaacttatcgaatttaa 337  Q
    |||||||||||  |||||| || ||||||||| ||||| |||||||| ||| ||||||||||    
T  6918988 cggttttgtaaatatgagttaggccccaaatttcaacatgtattagagcttgtcgaatttaa 6918927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 6919235 - 6919174
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaacaggtattagaacttatcgaatttaa 337  Q
    |||||||||||  |||||| || ||||||||| ||||| |||||||| ||| ||||||||||    
T  6919235 cggttttgtaaatatgagttaggccccaaatttcaacatgtattagagcttgtcgaatttaa 6919174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 24918201 - 24918270
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||||    
T  24918201 agagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttaggccccaaatt 24918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 1893780 - 1893844
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||||||||| ||||||  | || ||||||||  |||||||||| |||||||||||| ||||    
T  1893780 tattgggaaaaactcaagtctcatattggatagatacgactcttgataagagtttataaagagga 1893844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 304
Target Start/End: Original strand, 2716337 - 2716449
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    |||||||||||| ||||||  ||||| ||||||   ||| ||||| | |||||||||| |||||||| | ||||||||  ||   ||||||||||| |||    
T  2716337 ttgggaaaaaccaaagtcccccatcgaatagatattactgttgataaaagtttataaagaggagacactcctcaccttataagctggttttgtaaggatg 2716436  T
Q  292 agtcagaccccaa 304  Q
    ||| || ||||||    
T  2716437 agttaggccccaa 2716449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 24792184 - 24792124
Alignment:
Q  240 agtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacc 300  Q
    |||||||||| |||||||| | |||||| | |||  ||||||||||||||||||| |||||    
T  24792184 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 24792124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 40961748 - 40961820
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| ||||| | | ||| ||||||| ||||| ||||| |||||||||||  |||||||| ||||||||||    
T  40961748 aaaaactcaagttccatatcagatagataagacttttgataagagtttataacgaggagacacttctcacctt 40961820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 9e-40; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 190 - 376
Target Start/End: Complemental strand, 16877122 - 16876935
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  16877122 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 16877023  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagaga 376  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || |||||||    
T  16877022 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagaga 16876935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 28149785 - 28149909
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||| |||| ||||||||||||| | ||||||||| |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  28149785 tattgggaaaaacccatgtcccacatcggatagataaaactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 28149884  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  28149885 tgagttaggccccaaatttcaacag 28149909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 26098746 - 26098869
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| | |||||||||| |||||||| | ||||||||   || ||||||||||||||    
T  26098746 tattgggaaaaacccaagtcctacatcggattgataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaa 26098845  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  26098846 tgagttaggccccaaatttcaaca 26098869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 15102737 - 15102613
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaa-tcggttttgtaaga 288  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||| || | ||||| |  ||||  ||||||||||||     
T  15102737 tattgggaaaaacccaagtcccacatcaaatagatgagactcttgatgagagtttataaagaggaggcactcctcacttcacaaagccggttttgtaagg 15102638  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||||||| |||||    
T  15102637 atgagttagaccccaaatttcaaca 15102613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 15102863 - 15102743
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || | ||||| |  |||| |||||||||||| |    
T  15102863 tattgggaaaaacccaagtcc-acatcagatagatgagactcttgatgagagtttataaagaggagtcactcctcacttcacaaaccggttttgtaagga 15102765  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    |||||  ||||||||||| |||||    
T  15102764 tgagt--gaccccaaatttcaaca 15102743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 25999015 - 25999138
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| |||| | |||||||||| |||||||| | ||||||||   || ||||||||||||||    
T  25999015 tattgggaaaaacccaagtcccacatcggattgataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaa 25999114  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  25999115 tgagttaggccccaaatttcaaca 25999138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 11313494 - 11313371
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  | |||||||||| |    
T  11313494 tattgggaaaaacccaaatcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaagga 11313395  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  11313394 tgagttaggccccaaatttcaaca 11313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 15101223 - 15101100
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  15101223 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 15101124  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  15101123 tgagttaggcccccaatttcaaca 15101100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 16590176 - 16590299
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||   ||| |||||||| ||||| |||| ||||| || |||  |||||||||||| |    
T  16590176 tattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaagga 16590275  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||||||||| |||||    
T  16590276 tgagttagaccccaaatttcaaca 16590299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 16605204 - 16605081
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||   ||| |||||||| ||||| |||| ||||| || |||  |||||||||||| |    
T  16605204 tattgggaaaaacccaagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaagga 16605105  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||||||||| |||||    
T  16605104 tgagttagaccccaaatttcaaca 16605081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 26098334 - 26098457
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| | |||||||||| |||||||| | ||||||||   || || ||||||||| |    
T  26098334 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 26098433  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  26098434 tgagttaggccccaaatttcaaca 26098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 26098540 - 26098685
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||  | ||| |||||| |||| | |||||||||| |||||||| | ||||||||   || || |||||||||||    
T  26098540 tattgggaaaaacccaagtcccacatcgtcttgataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagaa 26098639  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatt 334  Q
    ||||| || ||||||||| ||||| ||||| ||||||| |||||||    
T  26098640 tgagttaggccccaaatttcaacatggtatcagaacttgtcgaatt 26098685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 11316835 - 11317019
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||| | || | ||||| |  |||  ||||||||||||      
T  11316835 tattgggaaaaactcaagttccacatcggatagatgagactcttgatgagagtttataaagagggggcactcctcacttcacaagccggttttgtaaggt 11316934  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || |||| |||| ||||| ||||| ||| ||| ||||||| |||| |  |||  || |||||||||||||| || ||||||    
T  11316935 tgagttaggcccccaatttcaacatggtatcagagcttgtcgaattcaagggccacct--acctattcacgcaccaagcccaaagag 11317019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 11317040 - 11317099
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11317040 tattgggaaaaacccaagtcccacatcggatagatgaaactcttgatgagagtttataaa 11317099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 25998809 - 25998932
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| | |||||||||| |||||||| | ||||||||   || || ||||||||| |    
T  25998809 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 25998908  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||| | || ||||||||| |||||    
T  25998909 tgatttaggccccaaatttcaaca 25998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 5269363 - 5269262
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    ||||||||||||| ||||||||||  |||||||||||| || || |||| |||||||| |||  |||||||||||| |||||| |||||| |||||||||    
T  5269363 acatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccctaaattacaa 5269264  T
Q  312 ca 313  Q
    ||    
T  5269263 ca 5269262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 24558575 - 24558692
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||| ||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||| || |    
T  24558575 tattgggaaaaatccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtgagga 24558674  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||||||||    
T  24558675 tgagttaggccccaaatt 24558692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 19292023 - 19291907
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    ||||||| |||||| ||||||||||||| ||||||||||| ||||||| || | |||||||||| ||||||||  || | ||||||||||| |||||| |    
T  19292023 aaaaaccaaagtcccacatcggatagataagactcttgataagagtttgtatagaggagacaatcctcaccttataagttggttttgtaaggatgagtta 19291924  T
Q  297 gaccccaaattacaaca 313  Q
    | | ||||||| |||||    
T  19291923 ggctccaaatttcaaca 19291907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 24558780 - 24558904
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| ||||||| | |||  ||||||||||||| |||||||| |  |||||||||||| |||||||||| |||||||| |||   ||||||||||| |    
T  24558780 tattggaaaaaacctatgtctcacatcggatagataagactctttagaagagtttataaagaggagacaatcctcaccttacaagctggttttgtaagga 24558879  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  24558880 tgagttaggccccaaatttcaacag 24558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 10418434 - 10418327
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   |||||||||||||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  10418434 agtcccacatcggatagatagcactcttgatgagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 10418335  T
Q  306 ttacaaca 313  Q
    || |||||    
T  10418334 ttccaaca 10418327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 12134579 - 12134466
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| |||||||| | || ||||| |||| |||||||||||| |||||| || |||||||    
T  12134579 agtcccacatcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccggttttgtaaggatgagttaggccccaaa 12134480  T
Q  306 ttacaacaggtatt 319  Q
    || |||||| ||||    
T  12134479 tttcaacagttatt 12134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 16876936 - 16876819
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtc 295  Q
    |||||| |||||||| |||| |||||||  ||||||||||  | |||||||||| ||||| |||| |||||||| |||  |||||||||||| ||||||     
T  16876936 gaaaaatccaagtcccacataggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtt 16876837  T
Q  296 agaccccaaattacaaca 313  Q
    || ||||||||| |||||    
T  16876836 aggccccaaatttcaaca 16876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 19712696 - 19712571
Alignment:
Q  215 tcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca- 313  Q
    ||||||||||   ||||||||  |||||||||||| ||||| |||| |||||||| |||   ||||||||||| |||||| || |||||||||||||||     
T  19712696 tcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaattacaacat 19712597  T
Q  314 ggtattagaacttatcgaatttaagg 339  Q
    ||||| ||||||| ||||||| ||||    
T  19712596 ggtatcagaacttgtcgaattcaagg 19712571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 6623539 - 6623443
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| ||||||  || | |||| |||||||| |||  |||||||||    
T  6623539 tttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagtgggggcaatcctcaccttacaagccggttttgt 6623443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 30526832 - 30526889
Alignment:
Q  193 tgggaaaaacccaa-gtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  30526832 tgggaaaaacctaaagtcccacatcggatagatgagactcttgatgagagtttataaa 30526889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 30539415 - 30539471
Alignment:
Q  193 tgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  30539415 tgggaaaaacccaagtcccacatcggatagataagacttttgataagagtttataaa 30539471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 19054501 - 19054608
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| | ||||||||  |||||||||||| | ||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  19054501 agtcccacatcggatagataacactcttgagaagagtttataaagatgaggcactcctcaccttacaagccggttttgtaaggatgagttagtccccaaa 19054600  T
Q  306 ttacaaca 313  Q
    || |||||    
T  19054601 tttcaaca 19054608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 19712516 - 19712393
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| ||| || | ||||||||||||| ||||||||||  | |||||||||  ||||| |||| | |||||| |||  || ||||||||| |    
T  19712516 tattgggaaaaatccatgttccacatcggatagataagactcttgagaatagtttataaggaggaggcaatccccaccttacaagccgattttgtaagga 19712417  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  19712416 tgagttaggccccaaatttcaaca 19712393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 26394543 - 26394622
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| || || | ||||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||||||    
T  26394543 tattgggaaaaactcatgttccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctcacctt 26394622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 30539243 - 30539350
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||   |||||| | |||||||| |||  |||||||||||| ||||   || |||||||    
T  30539243 agtcccacatcggatagataagactcttgataagagtttataaaggcgagacactcctcaccttacaagccggttttgtaaggatgaactaggccccaaa 30539342  T
Q  306 ttacaaca 313  Q
    || |||||    
T  30539343 tttcaaca 30539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 15293987 - 15293869
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||| ||||||   |||| ||||||| ||| ||||||||||||||||||||   |||||| | |||||||  |||  ||||||| ||||     
T  15293987 ttattgggaaaaactcaagtctcgcatcagatagattagattcttgatgagagtttataaagcagagacattcctcacctcacaagccggttttataagg 15293888  T
Q  289 atgagtcagaccccaaatt 307  Q
    |||| | ||||||||||||    
T  15293887 atgaattagaccccaaatt 15293869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 375
Target Start/End: Complemental strand, 18494501 - 18494407
Alignment:
Q  282 tgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| |||||| || |||| |||| ||||| ||||| ||| ||| ||||||| |||| |||||||||| |||||||||||||| |||||||||    
T  18494501 tgtaaggatgagttaggcccccaatttcaacatggtatcagagcttgtcgaattcaagggctgcctaaacctattcacgcaccaagcctaaagag 18494407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 2902819 - 2902902
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggtttt 282  Q
    |||||| ||||||||||||||||||||| |||||||| || ||||||||| || ||||||| | ||||||||| ||| ||||||||    
T  2902819 aaaaactcaagtcctacatcggatagataagactcttcataagagtttat-aagaggagac-actctcaccttacaagtcggtttt 2902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 8144025 - 8144126
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  8144025 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 8144124  T
Q  306 tt 307  Q
    ||    
T  8144125 tt 8144126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 10733534 - 10733433
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| ||| |||| | ||||||||  |||||||||||| |||||||| | |||||||| |||  |||||||||||| |||||| || |||||||    
T  10733534 agtcccacattggacagataacactcttgagaagagtttataaagaggagacactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 10733435  T
Q  306 tt 307  Q
    ||    
T  10733434 tt 10733433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 1744938 - 1744831
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| ||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  1744938 agtcccacattggatagatagtactcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 1744839  T
Q  306 ttacaaca 313  Q
    || |||||    
T  1744838 tttcaaca 1744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 24055205 - 24055098
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| | ||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  24055205 agtcccacatcggatagatagcactcttgagaagagtttataaagacgaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 24055106  T
Q  306 ttacaaca 313  Q
    || |||||    
T  24055105 tttcaaca 24055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 18494386 - 18494284
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| ||||| ||||||  ||||||||||  | | |||||||| ||||| |||| |||| ||| |||  |||||||||||| |    
T  18494386 tattgggaaaaacccaaatcccacatcagatagacaagactcttgagaataatttataaagaggaggcaatcctcatcttacaagccggttttgtaagga 18494287  T
Q  290 tga 292  Q
    |||    
T  18494286 tga 18494284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 31969 - 31926
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  31969 agtccaacatcggatagataagactcttgataagagtttataaa 31926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 25184018 - 25184089
Alignment:
Q  213 catcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    |||||||||||| ||| ||||||| |||||||||||| || ||||||| |||||| | |||  |||||||||    
T  25184018 catcggatagataagattcttgataagagtttataaagagaagacaatcctcaccgtacaagccggttttgt 25184089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 12124806 - 12124760
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgat 236  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  12124806 tattgggaaaaacctaagtcccacatcagatagatgagactattgat 12124760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 17147968 - 17147894
Alignment:
Q  239 gagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||||| ||||| |||| |||||||| |||  |||||||||||| |||||| || || |||||| |||||    
T  17147968 gagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccacaaatttcaaca 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 22911539 - 22911485
Alignment:
Q  253 gagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| | |||||||| ||| |||||||||||||||||||| |||||| |||||    
T  22911539 gagacactcctcaccttacaagtcggttttgtaagaatgagttagaccctaaatt 22911485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 2923068 - 2923011
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttata 247  Q
    ||||||||||||| || |||| || ||||||||||  |||||||||| ||||||||||    
T  2923068 tattgggaaaaactcatgtcccacgtcggatagatatgactcttgataagagtttata 2923011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 17096788 - 17096687
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    |||||| ||||||  || ||||||  |||||||||||| |||||| | | ||| || | |||  |||||||||||| |||||| |||||||||||| |||    
T  17096788 acatcgaatagataggagtcttgagaagagtttataaagaggagaaactcctcgccgtacaagccggttttgtaaggatgagttagaccccaaatttcaa 17096689  T
Q  312 ca 313  Q
    ||    
T  17096688 ca 17096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 28072568 - 28072467
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| ||||| |||| |||||  |||||||||||| |||||| | | |||| ||| ||| | || ||||||| ||||||| | ||||||||    
T  28072568 agtcccacatcggttagataagacgcttgacaagagtttataaagaggagatactcctcatcttacaagttggatttgtaacaatgagttataccccaaa 28072469  T
Q  306 tt 307  Q
    ||    
T  28072468 tt 28072467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 30527034 - 30527083
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgag 239  Q
    |||||| || ||| ||||||| ||||||||||||||| ||||||||||||    
T  30527034 tattggaaacaactcaagtcccacatcggatagatgaaactcttgatgag 30527083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 27914397 - 27914321
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| |||||||||||| ||||| || | || ||||| |||  |||||||||||| |||||| || |||||||||    
T  27914397 cttgatcagagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttaggccccaaatt 27914321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 29742546 - 29742469
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||| ||||||||  |||||| |||||||||  |  ||||||||||||| |||||||||| ||||| |||| ||||||||    
T  29742546 tattaggaaaaacttaagtcccacatcggattta--agactcttgatgaaagtttataaagaggaggcaatcctcacctt 29742469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 12017003 - 12016817
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  12017003 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 12016904  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || |||| |||| ||||| ||||| ||| ||| ||||||| ||||||||||||||| ||||||| |||||| || ||||||    
T  12016903 tgagttaggcccccaatttcaacatggtatcagagcttgtcgaattcaaggactgcctaaacctattcacacaccaagcccaaagag 12016817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 190 - 380
Target Start/End: Complemental strand, 17077256 - 17077067
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||  ||||||||||||  ||||||||||||      
T  17077256 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcaccttgcaagccggttttgtaaggt 17077157  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagagagatg 380  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| |  |||  || |||||||||||||| ||||||||| ||||    
T  17077156 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccacct--acctattcacgcaccaagcctaaagagtgatg 17077067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 28245985 - 28246099
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||| |||||||||||| |    
T  28245985 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaagagaaggcaatcctcaccttgcaaaccggttttgtaagga 28246084  T
Q  290 tgagtcagaccccaa 304  Q
    ||||| || ||||||    
T  28246085 tgagttaggccccaa 28246099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 375
Target Start/End: Original strand, 28245782 - 28245964
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||| ||||| |||| ||||||||||||  ||||||||||||     
T  28245782 ttattgggaaaaacccaagtcccacatcggatagatgagactc---atgagagtttataaagaggaggcaatcctcaccttgcaagccggttttgtaagg 28245878  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || |||| |||| ||||| ||||| ||| ||| ||||||| |||| |  |||  || ||||||||||||||||| ||||||    
T  28245879 atgagttaggcccccaatttcaacatggtatcagagcttgtcgaattcaagggccacct--acctattcacgcaccaaacccaaagag 28245964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 17077052 - 17076929
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||  ||||| ||||||  ||||||||||||      
T  17077052 tattgggaaaaacccaagtcccacatcggatagatgagactcttgatgagagttcataaagaggaggcaaccctcactttgcaagccggttttgtaaggt 17076953  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  17076952 tgagttaggccccaaatttcaaca 17076929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 43943664 - 43943788
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  43943664 ttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 43943763  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || |||| |||| |||||    
T  43943764 atgagttaggcccccaatttcaaca 43943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 25753717 - 25753594
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  25753717 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 25753618  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| ||  |||||||| |||||    
T  25753617 tgagttaggtcccaaatttcaaca 25753594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 27634438 - 27634315
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| ||||||||||||| |||  || ||||||||| |    
T  27634438 tattgggaaaaaccaaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccgattttgtaagga 27634339  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||||||||||||||    
T  27634338 tgagttaggccccaaattacaaca 27634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 362
Target Start/End: Original strand, 5488359 - 5488532
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  5488359 tattgggaaaaacccaagtcccacatcggataaataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 5488458  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcac 362  Q
    ||||| || || |||||| ||||| | ||| ||| ||| |||| ||  ||| | |||||||| |||||||||||    
T  5488459 tgagttaggcctcaaatttcaacatgatatcagagcttgtcgagttctagggccgcctaaacctattcacgcac 5488532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 12016795 - 12016672
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  12016795 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 12016696  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  12016695 tgagttaggcccccaatttcaaca 12016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 28395168 - 28395292
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||    
T  28395168 tttattgggaaaaacccaagtcccacattggatagataagactcttga-aagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaag 28395266  T
Q  288 aatgagtcagaccccaaattacaaca 313  Q
     |||||| || ||||||||| |||||    
T  28395267 gatgagttaggccccaaatttcaaca 28395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 29113441 - 29113565
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||   ||||||||||| |    
T  29113441 tattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaagga 29113540  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  29113541 tgagttaggccccaaatttcaacag 29113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 21498523 - 21498646
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||||| || ||  ||| |||||||| |||  |||||||||||| |    
T  21498523 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaagagaaggtaatcctcaccttacaagccggttttgtaagga 21498622  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||||||||||||||    
T  21498623 tgagttaggccccaaattacaaca 21498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 53863897 - 53864020
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| ||||||||||||||| ||||||||||||| ||||| ||||| | |||||||||| |||||||| | ||||||||   || |||||||||||| |    
T  53863897 tattgagaaaaacccaagtccaacatcggatagataagacttttgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagga 53863996  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| ||||| |||||| |||||    
T  53863997 tgagttagaccacaaatttcaaca 53864020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 54210369 - 54210492
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||||| |||||  ||||||||  || |||  |||||||||||| |    
T  54210369 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggtaattctcaaattacaagccggttttgtaagga 54210468  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||||||||||||||    
T  54210469 tgagttaggccccaaattacaaca 54210492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 56511289 - 56511439
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||| |  ||||| ||||||||||| |||||||||||| ||||| || | ||||||||   || |||||||||||| |    
T  56511289 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaagga 56511388  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| ||||    
T  56511389 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagg 56511439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 3055776 - 3055880
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaat 290  Q
    |||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||  || | ||||||||  || ||||||||||||| ||    
T  3055776 attgggaaaaacccaagtcccacattggatagataggactcttgatgagagtttataaagaggatgcactcctcaccttaaaagtcggttttgtaaggat 3055875  T
Q  291 gagtc 295  Q
    |||||    
T  3055876 gagtc 3055880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 28497326 - 28497222
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| || |  ||  |||| ||| |||||||||||| |    
T  28497326 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaagaggaggcactcttcggcttgtaaaccggttttgtaagga 28497227  T
Q  290 tgagt 294  Q
    |||||    
T  28497226 tgagt 28497222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 1923103 - 1922980
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||  |||||||||||| ||||  ||||  ||||| | |||  ||||||| |||| |    
T  1923103 tattgggaaaaacccatgtcccacatcagatagataagactcttgagaagagtttataaagaggaagcaatcatcaccatacaagccggttttataagga 1923004  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    |||||||||||||||||| |||||    
T  1923003 tgagtcagaccccaaatttcaaca 1922980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 8560083 - 8559960
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||||| ||  ||  |||||||||||| |    
T  8560083 tattgggaaaagtccaagtcccacatcggatagataagactcttgataagagtttatatcgaggaggcaatcctcactttagaagccggttttgtaagga 8559984  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||||||||| |||||    
T  8559983 tgagttagaccccaaatttcaaca 8559960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 33629651 - 33629835
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||  | | ||||| |  |||  ||||||||| |  |    
T  33629651 tattgggaaaaacccaagttccacattggatagatgagactcttgatgagagtttataaataggaggtactcctcacatcacaagccggttttgtgacga 33629750  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| |||| || ||||||  |||  || |||||||||||||| || ||||||    
T  33629751 tgagttaggccccaaatttcaacatggtatcagagcttgtcgacttcaaggaccacct--acctattcacgcaccaagcccaaagag 33629835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 39110899 - 39110996
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||  ||||| |||||| |||||||||| ||| |||| |||  ||||||||||||    
T  39110899 tattgggaaaaactcaagtcccacatcggatagataagactcttgagaagagtatataaagaggagacaatcctcgccttacaagccggttttgtaag 39110996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 329
Target Start/End: Original strand, 990555 - 990679
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| | ||||||||  |||||||||||| ||||| || | |||||||| ||| ||||||||||||| |||||| || |||||||    
T  990555 agtcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttaggccccaaa 990654  T
Q  306 ttacaaca-ggtattagaacttatc 329  Q
    || ||||| ||||| ||| ||||||    
T  990655 tttcaacatggtatcagagcttatc 990679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 8305067 - 8304988
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| || |||||||||||||||||| ||||| ||||| |||||||||| | |||||||||| ||||||||    
T  8305067 tattgggaaaaactcatgtcctacatcggatagataagacttttgataagagtttatatagaggagacaatcctcacctt 8304988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 23350791 - 23350870
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||| ||| |||||||||| || ||||||||||| ||||| |||||| |||||||||| ||||||||    
T  23350791 tattgggaaaaacccaaatcccacatcggataaataagactcttgataagagtatataaagaggagacaatcctcacctt 23350870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 56511496 - 56511619
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||| |  ||||| ||||||||||| |||||||||||| ||||| || | ||||||||   || || ||||||||| |    
T  56511496 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccgattttgtaagga 56511595  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  56511596 tgagttaggccccaaatttcaaca 56511619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 49380992 - 49380898
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    |||||||||||| |||||||  ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||    
T  49380992 tattgggaaaaatccaagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgt 49380898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 33629917 - 33629978
Alignment:
Q  194 gggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  33629917 gggaaaaactcaagtcccacattggatagatgagactcttgatgagagtttataaataggag 33629978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 10390573 - 10390437
Alignment:
Q  204 caagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacccca 303  Q
    ||||||| |||| |||||||| || |||||||| | |||||||||| |||||||| | ||||||||   || | |||||||||| |||||| ||||||||    
T  10390573 caagtcccacattggatagataagtctcttgataatagtttataaagaggagacattcctcaccttatgaaccagttttgtaaggatgagttagacccca 10390474  T
Q  304 aattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    |||| ||||| ||||| ||| ||| ||||||| ||||    
T  10390473 aatttcaacatggtatcagagcttgtcgaattcaagg 10390437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 22865761 - 22865884
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||| ||||||| ||||||||||||| |||| |||||| | |||||||||| ||| | || | ||||||||   || ||||||||||||     
T  22865761 ttattgggaaaaactcaagtcc-acatcggatagataagacccttgataatagtttataaagagggggcagtcctcaccttatgaaccggttttgtaagg 22865859  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| |||||| ||||| |||||    
T  22865860 atgagttagaccctaaatttcaaca 22865884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 52827337 - 52827237
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||||||||||  |||| ||||||||  |||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||||    
T  52827337 aaaaacccaagtctcacattggatagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtca 52827238  T
Q  297 g 297  Q
    |    
T  52827237 g 52827237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 991212 - 991319
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| | ||||||||  |||||||||||  ||||| || | |||||||| |||  |||||||||||| |||||| ||||||||||    
T  991212 agtcccacatcggatagataacactcttgagaagagtttataatgaggaggcactcctcaccttacaagccggttttgtaaggatgagttagaccccaaa 991311  T
Q  306 ttacaaca 313  Q
    || |||||    
T  991312 tttcaaca 991319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 47491958 - 47491883
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||  ||||||||| ||||||| |||| ||||    
T  47491958 tattgggaaaaacccatgtcccacatcggatagataagactcttgataggagtttatataaaggaggcaatcctca 47491883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 23018484 - 23018585
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    |||||||||||||  |||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||    
T  23018484 acatcggatagatatgactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 23018583  T
Q  312 ca 313  Q
    ||    
T  23018584 ca 23018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 3640198 - 3640274
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcac 266  Q
    ||||||||||||| || |||| || |||||||||| ||||||||||| |||||||||| | |||||||||| |||||    
T  3640198 tattgggaaaaactcatgtcccacgtcggatagataagactcttgataagagtttatatagaggagacaatcctcac 3640274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 7892750 - 7892646
Alignment:
Q  204 caagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatc-ggttttgtaagaatgagtcagacccc 302  Q
    ||||||| ||||||||||||| |||||||||||  ||||||||| | |||||||||| |||||||| |||  | |||| | |||| |||||| |||||||    
T  7892750 caagtcccacatcggatagataagactcttgatatgagtttatatagaggagacaatcctcaccttacaacgctggttctttaaggatgagttagacccc 7892651  T
Q  303 aaatt 307  Q
    |||||    
T  7892650 aaatt 7892646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 27634557 - 27634457
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaaga 374  Q
    |||||||||||  |||||| || ||||||||||||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || |||||    
T  27634557 cggttttgtaacgatgagttaggccccaaattacaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaaga 27634458  T
Q  375 g 375  Q
    |    
T  27634457 g 27634457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 29669459 - 29669351
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  29669459 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 29669360  T
Q  306 ttacaacag 314  Q
    || ||||||    
T  29669359 tttcaacag 29669351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 45427026 - 45426926
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| ||| ||||||||||||| |||||| || ||||||||| |||    
T  45427026 acatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttaggccccaaatttcaa 45426927  T
Q  312 c 312  Q
    |    
T  45426926 c 45426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 26806503 - 26806615
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| | |||||||||||  |||||||||| ||||||||||| |  |||||| | |||| ||| |||  | |||||||||| |    
T  26806503 tattgggaaaaacccaagtcccaaatcggatagataggactcttgataagagtttataaga--gagacactcctcaacttacaagccagttttgtaagga 26806600  T
Q  290 tgagtcagaccccaa 304  Q
    ||||| || ||||||    
T  26806601 tgagttaggccccaa 26806615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 35399461 - 35399342
Alignment:
Q  257 caattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttatt 355  Q
    |||| |||||||| |||  ||||||||||||  ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||    
T  35399461 caatcctcaccttacaagccggttttgtaaggttgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctatt 35399362  T
Q  356 cacgcaccaaacctaaagag 375  Q
    |||||||||| || ||||||    
T  35399361 cacgcaccaagcccaaagag 35399342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 50307273 - 50307372
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||  |||| || | ||||||||   || | |||||||||| ||||||    
T  50307273 ggaaaaacccaagtcccacatcggatagataagactcttgacaagagtttataaagcggaggcactcctcaccttatgaaccagttttgtaaggatgagt 50307372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 51469489 - 51469596
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| ||||| || | |||||||| |||  ||||| |||||| |||||| || |||||||    
T  51469489 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaaggatgagttaggccccaaa 51469588  T
Q  306 ttacaaca 313  Q
    || |||||    
T  51469589 tttcaaca 51469596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 52214623 - 52214730
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| || ||||| | ||||||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  52214623 agtcccacattgggtagataatactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 52214722  T
Q  306 ttacaaca 313  Q
    || |||||    
T  52214723 tttcaaca 52214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 53386176 - 53386101
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||||||| |||||||| | |||||||| ||| ||||||||||||| |||||| ||||| |||||| |||||    
T  53386176 agagtttataaagaggagacattcctcaccttacaagtcggttttgtaaggatgagttagacctcaaatttcaaca 53386101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 53740190 - 53740297
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  53740190 agtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 53740289  T
Q  306 ttacaaca 313  Q
    || |||||    
T  53740290 tttcaaca 53740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 42312821 - 42312887
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||| |||||| ||||| | | ||||||||||||||||||||||||| |||||||||| |||||    
T  42312821 ttattggaaaaaactcaagttccatatcggatagatgagactcttgatgaaagtttataaagaggag 42312887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 45684286 - 45684208
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||||||||||||||| |||| |||||||||||||  |||||||||| | |||||||| | || ||||||| |||||||    
T  45684286 tattgggaaaaacccatgtcccacatcggatagatacgactcttgataaaagtttatatagagaagacaatcctcacct 45684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 49380664 - 49380746
Alignment:
Q  202 cccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    |||| ||||||||| |||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||    
T  49380664 cccaggtcctacattggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgt 49380746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 33629596 - 33629637
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactc 231  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  33629596 tattgggaaaaacccaagtcccacatcggatagatgagactc 33629637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 33629855 - 33629896
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactc 231  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  33629855 tattgggaaaaacccaagtcccacatcggatagatgagactc 33629896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 15665161 - 15665269
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||| | ||||| || | |||||||| |||  |||||||||||| |||||| || || ||||    
T  15665161 agtcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcctcaaa 15665260  T
Q  306 ttacaacag 314  Q
    || ||||||    
T  15665261 tttcaacag 15665269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 20093332 - 20093428
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||| |||||| |||| || ||||||||||| ||| |||||||| || |  || ||||||||||  |||||||||||||||| ||||||    
T  20093332 aaaactcaagtcttacatcagataaataagactcttgataagaatttataaagagaatgcacttctcaccttataaatcggttttgtaaggatgagt 20093428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 33797221 - 33797117
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||| | ||| |||| ||||||||  |||||||||| |||||||||||| | ||| || | |||||||| |||  |||||| ||||| |    
T  33797221 tattgggaaaaacccgaatcccacattggatagataggactcttgataagagtttataaagacgaggcactcctcaccttccaagccggtttcgtaagga 33797122  T
Q  290 tgagt 294  Q
    |||||    
T  33797121 tgagt 33797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 3640448 - 3640527
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| ||  ||| ||||||||||||| ||||||||||| |||||||| | | ||||| |||| ||||||||    
T  3640448 tattgggaaaaactcatctcccacatcggatagataagactcttgataagagtttaaatagaggaggcaatcctcacctt 3640527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 27048208 - 27048125
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    |||||| | |||||||||| ||||| || | ||||||||||||  |||||||||||| |||||| || ||||||||| ||||||    
T  27048208 cttgataaaagtttataaagaggaggcactcctcaccttgcaagccggttttgtaaggatgagttaggccccaaatttcaacag 27048125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 29669774 - 29669667
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| | ||||||||    
T  29669774 agtcccacatcagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaaaccccaaa 29669675  T
Q  306 ttacaaca 313  Q
    || |||||    
T  29669674 tttcaaca 29669667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 51470491 - 51470598
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||  ||||| |  | |||||||| |||  |||||||||||| |||||| || |||||||    
T  51470491 agtcccacatcggatagataggactcttgagaagagtttataaggaggaggctctcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 51470590  T
Q  306 ttacaaca 313  Q
    || |||||    
T  51470591 tttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 400451 - 400373
Alignment:
Q  234 gatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaac 312  Q
    |||||||||||||||| | ||||||||  |||||||||||  | |||||||||| |||||| || ||||||||| ||||    
T  400451 gatgagagtttataaagatgagacaatattcaccttgcaagacagttttgtaaggatgagttaggccccaaatttcaac 400373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 5212091 - 5212009
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| ||||| | |||||||| || |||||||||||| |  ||||||| |||||||| |||  |||||||||||||||||||    
T  5212091 acatcagataggtaagactcttaataagagtttataaagaatagacaatcctcaccttacaatccggttttgtaagaatgagt 5212009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 14945135 - 14945245
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||    |||||||||| | ||||  |||| ||||||||   || |||||||||||| |    
T  14945135 tattgggaaaaacacatgtcccacatcggatagataagactcttcgaaagagtttatatagaggatgcaatcctcaccttatgaaccggttttgtaagga 14945234  T
Q  290 tgagtcagacc 300  Q
    ||||| |||||    
T  14945235 tgagttagacc 14945245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 20441566 - 20441500
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    |||| |||||||||||||| ||||  ||||||||||| |||| ||||||||||||||| | ||||||    
T  20441566 ttggaaaaaacccaagtcccacattagatagatgagattcttaatgagagtttataaagaagagaca 20441500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 43972363 - 43972469
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  | |||| ||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  43972363 agtcccacatcggatagataggactcttgagaaaagttgataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 43972462  T
Q  306 ttacaac 312  Q
    || ||||    
T  43972463 tttcaac 43972469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 7806497 - 7806413
Alignment:
Q  199 aaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||| |||  ||||||||||||| ||||||||||||| || ||||||| |||||||| | |||||||| |||  |||||||||    
T  7806497 aaacccaggtctcacatcggatagat-agactcttgatgatagcttataaagaggagacactcctcaccttacaagccggttttgt 7806413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 9758318 - 9758371
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||| |||||    
T  9758318 acatcggatagataagactcttgataagagtttatatagaggagacaactctca 9758371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 45427326 - 45427241
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  45427326 actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 52810721 - 52810660
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacc 267  Q
    ||||||||||||||||||| ||| ||||||  |||||||||||| |||||||| | ||||||    
T  52810721 agtcctacatcggatagataagattcttgagaagagtttataaagaggagacactcctcacc 52810660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 56509617 - 56509718
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    |||||||||||||||||||  ||| |||||  |||||||||||| ||||| || | |||| ||| |||  |||||||||| | |||||| || |||||||    
T  56509617 agtcctacatcggatagataggacccttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgtacggatgagttaggccccaaa 56509716  T
Q  306 tt 307  Q
    ||    
T  56509717 tt 56509718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 34206090 - 34205982
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagt-ttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaa 304  Q
    ||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||| || | |||||||| |||   ||||||||||| |||||| ||  |||||    
T  34206090 agtcccacatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggtcccaa 34205991  T
Q  305 attacaaca 313  Q
    ||| |||||    
T  34205990 atttcaaca 34205982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 39110709 - 39110813
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||| ||||||  ||||||||||||| ||| ||||||  ||||| | |||| ||||| |||| |||||||| |||  || ||||||||||     
T  39110709 tattggaaaaaactcaagtctcacatcggatagataagaatcttgagaagagtatgtaaagaggaggcaatcctcaccttacaagccgattttgtaagat 39110808  T
Q  290 tgagt 294  Q
    |||||    
T  39110809 tgagt 39110813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 40197229 - 40197269
Alignment:
Q  219 atagatgagactcttgatgagagtttataaaaaggagacaa 259  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  40197229 atagatgagactcttgataagagtttataaagaggagacaa 40197269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 13254391 - 13254498
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| ||||||||  |||| ||||  |||||||||||| | ||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  13254391 agtcccacattggatagataggactattgagaagagtttataaagatgaggcactcctcaccttacaacccggttttgtaagcatgagttaggccccaaa 13254490  T
Q  306 ttacaaca 313  Q
    || |||||    
T  13254491 tttcaaca 13254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 14115579 - 14115524
Alignment:
Q  214 atcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||| ||||||||||| |||||||||| | |||||||||| || |||||    
T  14115579 atcggatagataagactcttgataagagtttatatagaggagacaatccttacctt 14115524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 21497779 - 21497680
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  21497779 agtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 21497680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 21498195 - 21498294
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  21498195 agtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 21498294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 21647693 - 21647614
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||| ||||||  ||||||| |||||||||||||  |||||||||| |||| ||||||| ||||| || || |||||||    
T  21647693 tattgagaaaaattcaagtcccacatcggatagatatgactcttgataagaggttataaagaggagccacttatcacctt 21647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 27048504 - 27048397
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| ||  ||||||    
T  27048504 agtcccacatcggttagataggaagcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggtcccaaa 27048405  T
Q  306 ttacaaca 313  Q
    || |||||    
T  27048404 tttcaaca 27048397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 34206346 - 34206251
Alignment:
Q  212 acatcggatagatgagactcttgatgagagt-ttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaat 306  Q
    ||||||| ||||| ||||||||||| ||||| ||||||| ||||| || | |||||||| |||  |||||| ||||| |||||| || ||||||||    
T  34206346 acatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagccggtttcgtaaggatgagttaggccccaaat 34206251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 35565072 - 35565174
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaat 290  Q
    |||||||||||||||||||| || | ||||||||  ||||||||||  ||||||||||  | ||| |||| ||| |||| |||  |||||||||||| ||    
T  35565072 attgggaaaaacccaagtcccacgttggatagataggactcttgatatgagtttataatga-gaggcaatcctccccttacaagccggttttgtaaggat 35565170  T
Q  291 gagt 294  Q
    ||||    
T  35565171 gagt 35565174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 36558562 - 36558455
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||| ||||  |||||||||||| || |  || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  36558562 agtcccacatcggatagatatgacttttgagaagagtttataaagagtaagcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 36558463  T
Q  306 ttacaaca 313  Q
    || |||||    
T  36558462 tttcaaca 36558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 53559417 - 53559358
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    |||||||||||| |||||||| ||||||||||||| | ||||||||  ||||| ||||||    
T  53559417 tattgggaaaaaaccaagtcccacatcggatagataaaactcttgagaagagtatataaa 53559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 53720782 - 53720703
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||  |||||| ||||||||||||| ||||| ||||| | ||||||| || ||||| |||| || |||||    
T  53720782 tattgggaaaaactgaagtcccacatcggatagataagacttttgataaaagtttattaagaggaggcaatccttacctt 53720703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 53738304 - 53738197
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| | |||||| ||||||||||  |||||||||||| |||||||| |  ||||||| |||  | |||||||||| |||| | || |||||||    
T  53738304 agtcccacatagaatagataagactcttgagaagagtttataaagaggagacactcgtcaccttacaagccagttttgtaaggatgacttaggccccaaa 53738205  T
Q  306 ttacaaca 313  Q
    || |||||    
T  53738204 tttcaaca 53738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 4645866 - 4645940
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaa 286  Q
    ||||||||||||| ||||||||||  ||||| |||||| |||| ||||| |||||||| |||  || ||||||||    
T  4645866 acatcggatagataagactcttgagaagagtatataaagaggatacaatcctcaccttacaagccgtttttgtaa 4645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 6778739 - 6778665
Alignment:
Q  239 gagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||||| |||||||||| |||||||  |||  ||||||||||||  ||||| ||||| |||||| |||||    
T  6778739 gagtttataaagaggagacaatcctcacctcacaagccggttttgtaaggttgagttagacctcaaatttcaaca 6778665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 39910456 - 39910406
Alignment:
Q  262 ctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaac 312  Q
    ||||||||  |||||| ||||||||| |||||| |||||||||||||||||    
T  39910456 ctcaccttataaatcgattttgtaaggatgagttagaccccaaattacaac 39910406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 303
Target Start/End: Original strand, 5065845 - 5065958
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||| ||||||  ||||||||||||| ||||||||||  | | | |||||| ||||  |||| ||||||||  || |||||||||| |  |    
T  5065845 tattggaaaaaactcaagtctcacatcggatagataagactcttgaaaaaaatatataaagaggatgcaatcctcaccttataagtcggttttgtgatga 5065944  T
Q  290 tgagtcagacccca 303  Q
    ||||| ||||||||    
T  5065945 tgagttagacccca 5065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 7198083 - 7198034
Alignment:
Q  205 aagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    |||||| |||| |||||||| ||||||||||| |||||||||||| ||||    
T  7198083 aagtcccacattggatagataagactcttgataagagtttataaagagga 7198034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 21498441 - 21498502
Alignment:
Q  314 ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| |||||||||    
T  21498441 ggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcctaaagag 21498502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 9938466 - 9938586
Alignment:
Q  215 tcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca- 313  Q
    |||||||||| ||| | || || ||||||||||||  ||||||| ||||||||||  || || |||||||||| || ||| |||| | ||||| |||||     
T  9938466 tcggatagataagattttttataagagtttataaaggggagacacttctcaccttataagtcagttttgtaaggataagttagacgcaaaatttcaacat 9938565  T
Q  314 ggtattagaacttatcgaatt 334  Q
    ||||| ||| ||| |||||||    
T  9938566 ggtatcagagcttttcgaatt 9938586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 37288965 - 37288913
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    ||||| |||||||||||||  || ||||||  |||||||||||||||||||||    
T  37288965 agtcccacatcggatagatatgattcttgagaagagtttataaaaaggagaca 37288913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 190 - 361
Target Start/End: Complemental strand, 39078883 - 39078711
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| | ||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  39078883 tattgggaaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 39078784  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgca 361  Q
    ||||| || ||||||||||||||| ||||| ||||||||||||||| || | | |||||||| ||||||||||    
T  39078783 tgagttaggccccaaattacaacatggtatcagaacttatcgaattcaaaggccgcctaaacctattcacgca 39078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 374
Target Start/End: Complemental strand, 9264618 - 9264427
Alignment:
Q  184 attctttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttg 283  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| ||||| || |||  ||||||||    
T  9264618 attcgttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttg 9264519  T
Q  284 taagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaaga 374  Q
    |||| |||||| || ||||||||||||||| ||||| ||| ||| ||||||| |||| |  ||||||| |||||||||||||| || |||||    
T  9264518 taaggatgagttaggccccaaattacaacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaaga 9264427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 374
Target Start/End: Complemental strand, 4191234 - 4191049
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||| || ||||| |||  |||||||||||| |    
T  4191234 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctgaccttacaagccggttttgtaagga 4191135  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaaga 374  Q
    ||||| || ||||||||| ||| | ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || |||||    
T  4191134 tgagttaggccccaaatttcaatatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaaga 4191049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 51642749 - 51642561
Alignment:
Q  189 ttattgggaaaaacccaa-gtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||    
T  51642749 ttattgggaaaaacccaaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaag 51642650  T
Q  288 aatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  51642649 gatgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 51642561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 9264405 - 9264219
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  9264405 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 9264306  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  9264305 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 9264219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 37058883 - 37058697
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||||  ||||| |||||| |||||  ||| |||||||| |||| |||||||||||| |    
T  37058883 tattgggaaaaacccaagtcccacatcagatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaaaccggttttgtaagga 37058784  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||| ||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  37058783 tgagttaggcccaaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 37058697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 50692518 - 50692642
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  50692518 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 50692617  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  50692618 tgagttaggccccaaatttcaacag 50692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 49477528 - 49477649
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatg 291  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |||    
T  49477528 ttgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatg 49477627  T
Q  292 agtcagaccccaaattacaaca 313  Q
    ||| || |||||| ||||||||    
T  49477628 agttaggccccaatttacaaca 49477649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 365
Target Start/End: Complemental strand, 22407760 - 22407584
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||  ||||||| ||  ||||| |||||| ||||| || | |||||||| |||  |||||||||||| |    
T  22407760 tattgggaaaaatccaagtcccacatcggatagacaagactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaagga 22407661  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||||||    
T  22407660 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaa 22407584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 34899911 - 34899975
Alignment:
Q  368 ctaaagagagatgtgtttatatgcatataggtaaagtttggtagtttcaactttcaagttgagat 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899911 ctaaagagagatgtgtttatatgcatataggtaaagtttggtagtttcaactttcaagttgagat 34899975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 40230752 - 40230628
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  40230752 ttattgagaaaaacccaagttccacatcggatagatgagactcttgatgagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 40230653  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
     ||||| |  ||||||||| |||||    
T  40230652 ttgagttaagccccaaatttcaaca 40230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 364
Target Start/End: Original strand, 50692315 - 50692486
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  50692315 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 50692414  T
Q  290 tgagtcagaccccaaattacaacaggtattagaacttatcgaatttaaggactgcctaaacttattcacgcacca 364  Q
    ||||| || ||||||||| ||||| |    | | ||| ||||||| |||| | |||||||| |||||||||||||    
T  50692415 tgagttaggccccaaatttcaacatg---gaaagcttgtcgaattcaagggccgcctaaacctattcacgcacca 50692486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 9264198 - 9264075
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  9264198 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 9264099  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  9264098 tgagttaggccccaaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 189 - 375
Target Start/End: Original strand, 37223566 - 37223753
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| |||  |||||||||||| ||||| ||||  ||||||| |||  ||||||||||||     
T  37223566 ttattgggaaaaacctaagtcccacatcggatagataagactcctgagaagagtttataaagaggaggcaatcatcaccttacaagccggttttgtaagg 37223665  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    | |||| || | ||||||| ||||| ||||| ||| ||| ||||||| |||| |  ||||||| |||||||||||||| || ||||||    
T  37223666 aagagttaggctccaaatttcaacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagag 37223753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 40230546 - 40230424
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | |  ||||||||||||      
T  40230546 tattgggaaaaacccaagttccacatcggatagatgagactcttgatgagagtttataaagaggag-caatcctcaccttacgagccggttttgtaaggt 40230448  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  40230447 tgagttaggccccaaatttcaaca 40230424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 365
Target Start/End: Complemental strand, 53640284 - 53640108
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||| |||||| |    
T  53640284 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttatgtaagga 53640185  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||| |  ||| ||||| ||| | ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||||||    
T  53640184 tgagttatgccctaaatttcaatatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaa 53640108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 22339733 - 22339856
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| ||| ||||||||||||| |    
T  22339733 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagtcggttttgtaagga 22339832  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  22339833 tgagttaggcccccaatttcaaca 22339856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 375
Target Start/End: Complemental strand, 39956779 - 39956600
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||| ||||||| ||||| ||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |||||| |    
T  39956779 aaaaactcaagtcccacatcagatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 39956680  T
Q  297 gaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    | | ||||||| ||||| ||||| ||| ||| ||||||| |||| |  ||||||| |||||||||||||| || ||||||    
T  39956679 ggctccaaatttcaacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagag 39956600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 54495523 - 54495620
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||  |||||||||||| |||||||||| |||||||| |||  ||||||||||||    
T  54495523 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaag 54495620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 4029757 - 4029633
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||| ||  ||||||| ||||||||||||| ||||||||||  |||||||||||| |||| |||||  ||||||| |||| ||||||||||||     
T  4029757 ttattgggaataatgcaagtcccacatcggatagataagactcttgagaagagtttataaagaggatacaatcttcaccttacaaaccggttttgtaagg 4029658  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || ||||||||| |||||    
T  4029657 atgagttaggccccaaatttcaaca 4029633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 54591577 - 54591453
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||  ||||||||||||   ||| |||| |||||||| |||  |||||||||||| |    
T  54591577 tattgggaaaaatccaagtcccacatcggatagacaagactcttgagaagagtttataaaggtgaggcaatcctcaccttacaagccggttttgtaagca 54591478  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| |||||||||||| ||||||    
T  54591477 tgagttagaccccaaatttcaacag 54591453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 375
Target Start/End: Complemental strand, 10759098 - 10758934
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    ||||||||||||| ||| | ||||  ||| | |||||| ||||| ||||||||||||  ||| ||||||||||||| |||||| |||||||||||| |||    
T  10759098 acatcggatagataagatttttgagaagaatatataaataggaggcaattctcacctcacaagtcggttttgtaaggatgagttagaccccaaatttcaa 10758999  T
Q  312 ca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    || | ||| | | ||||||||||| |||  | | ||||||||||||||||||||| || ||||||    
T  10758998 catgatatcatagcttatcgaattcaagagccgtctaaacttattcacgcaccaagcccaaagag 10758934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 25628033 - 25627909
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaa-aggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||| |  ||||| ||||||| ||||| |||| |||||||| ||| | |||||||||||     
T  25628033 tattgggaaaaacccaagtcccacatcggatagataagattcttcagaagagtatataaaagaggaggcaatcctcaccttacaagttggttttgtaagg 25627934  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || ||||||||| |||||    
T  25627933 atgagttaggccccaaattccaaca 25627909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 35011856 - 35011980
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||| |  ||||| ||||||||||| |||||||||||| ||||| || | ||||||||   || |||||||||||| |    
T  35011856 tattgggaaaaacccaagtcccacattgagtagataagactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaagga 35011955  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  35011956 tgagttaggccccaaatttcaacag 35011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 51338553 - 51338449
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  51338553 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 51338454  T
Q  290 tgagt 294  Q
    |||||    
T  51338453 tgagt 51338449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 339
Target Start/End: Original strand, 35011648 - 35011799
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||| |||||||||||||| |||| |  ||||| ||||||||||| |||| ||||||| |||||||| | ||||||||   || ||||||||||||     
T  35011648 ttattggaaaaaacccaagtcccacattgagtagataagactcttgataagagattataaagaggagacactcctcaccttatgaaccggttttgtaagg 35011747  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| ||||    
T  35011748 atgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagg 35011799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 51642540 - 51642417
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| ||||||||||||||| || | |||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  51642540 tattgcgaaaaacccaagtcccacgttggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 51642441  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  51642440 tgagttaggccccaaatttcaaca 51642417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 32034081 - 32034162
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||| || |||| |||||| |||||| ||||||||||| |||||||||| |||||||||||| ||||||||    
T  32034081 tttattgggaaaaactcatgtcccacatcgaatagataagactcttgataagagtttatacaaaggagacaatcctcacctt 32034162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 49477349 - 49477505
Alignment:
Q  220 tagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca-ggtat 318  Q
    ||||| ||||||||||  | |||||||||| ||||| |||| |||||||| |||  |||||||||||| |||||| || |||||| |||||||| | |||    
T  49477349 tagataagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaatttacaacatgatat 49477448  T
Q  319 tagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     | | ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  49477449 caaagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 49477505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 50338494 - 50338370
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| ||||||| ||||||  | ||| ||||||| ||||||||||| |||||||||| | ||||||||||  ||||||| |||  ||||||||||||      
T  50338494 tattgagaaaaactcaagtctcatatcagatagataagactcttgataagagtttatatagaggagacaatcttcaccttacaagccggttttgtaaggt 50338395  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| |||||||||||| ||||||    
T  50338394 tgagttagaccccaaatttcaacag 50338370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 53640077 - 53639977
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||||    
T  53640077 tattgggaaaaatccaagtcccatatcggatagataagactcttgacaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagaa 53639978  T
Q  290 t 290  Q
    |    
T  53639977 t 53639977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 33909733 - 33909619
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    ||||| |||||||| ||||| ||||  | | ||||||||| ||||||||||||   ||| |||| |||||||||||| ||||||||||||| |||||| |    
T  33909733 aaaaatccaagtcccacatcagataactaaaactcttgataagagtttataaat--gaggcaatcctcaccttgcaagtcggttttgtaaggatgagtta 33909636  T
Q  297 gaccccaaattacaaca 313  Q
    ||||||||||| |||||    
T  33909635 gaccccaaatttcaaca 33909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 35015477 - 35015594
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||| | ||||||||| | |||||||||| ||||| |||| ||||| ||  ||  |||||||||||| |    
T  35015477 tattgggaaaaagccaagtcccacatcggatagataaaactcttgataaaagtttataaagaggaggcaatcctcactttataagccggttttgtaagta 35015576  T
Q  290 tgagtcagaccccaaatt 307  Q
    |||||  | |||||||||    
T  35015577 tgagtttggccccaaatt 35015594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 50203947 - 50203846
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||| || | ||||||||  ||| |||||||||||| |||||| || ||||||||| |||    
T  50203947 acatcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgagttaggccccaaatttcaa 50203848  T
Q  312 ca 313  Q
    ||    
T  50203847 ca 50203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 19820632 - 19820517
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    ||||||||| || | |||||||||| || | ||||||||  |||||||||||| |||||||||| |||||||| |||| |||||||||||| |||||| |    
T  19820632 aaaaacccatgttccacatcggata-ataaaactcttgagaagagtttataaagaggagacaatcctcaccttacaaaccggttttgtaaggatgagtta 19820534  T
Q  297 gaccccaaattacaaca 313  Q
    | || |||||| |||||    
T  19820533 ggcctcaaatttcaaca 19820517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 32215620 - 32215548
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||| |||  |||||||||    
T  32215620 acatcgtatagatgagactcttgatgagagtttataaagaggagaccatcctcaccttacaagccggttttgt 32215548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 10758880 - 10758757
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||| ||||||| ||||||||||||| ||||||||||  ||| | |||||| || ||||||| |||||||  |||  |||||||||||| |    
T  10758880 tattggaaaaaactcaagtcccacatcggatagataagactcttgagaagattatataaatagaagacaatactcacctcacaagccggttttgtaagga 10758781  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||| | ||||| |||||    
T  10758780 tgagttagactctaaatttcaaca 10758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 11414366 - 11414480
Alignment:
Q  200 aacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagac 299  Q
    |||||| |||| |||||||||| || ||||||||||  |||||||||||| |||||||||| ||||||||  ||  |||||||||||| |||||| || |    
T  11414366 aacccatgtcccacatcggata-ataagactcttgagaagagtttataaagaggagacaatcctcaccttagaagccggttttgtaaggatgagttaggc 11414464  T
Q  300 cccaaattacaacagg 315  Q
    | |||||| |||||||    
T  11414465 ctcaaatttcaacagg 11414480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 38421977 - 38422097
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| |||||| ||||||||||||| ||||| || || |||||||||  | ||||| || |||||||||| |||  || |||||||||      
T  38421977 tattgggaaaaacctaagtcccacatcggatagataagactattaataagagtttat--ataggaggcagttctcaccttacaagccgattttgtaaggt 38422074  T
Q  290 tgagtcagaccccaaattacaac 312  Q
    ||||| |||||||||||| ||||    
T  38422075 tgagttagaccccaaatttcaac 38422097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 39956579 - 39956456
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||| ||||||  ||| |||| |  |||||||||||| |||||||||| |||||||| |||  | |||||||||| |    
T  39956579 tattgggaaaaatccaagtcccacatcagatagacaagaatcttaagaagagtttataaagaggagacaatcctcaccttacaagccagttttgtaagga 39956480  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||| | || ||||||||| |||||    
T  39956479 tgaattaggccccaaatttcaaca 39956456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 40926446 - 40926525
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||| ||||    
T  40926446 tattgggaaaaacacatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctctcctt 40926525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 43101467 - 43101360
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||  |||||||||  |||||||||||| ||||| || | |||||||| ||||||||||||||||| ||||||  | |||||||    
T  43101467 agtcccacatcagatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaaatcggttttgtaaggatgagtttggccccaaa 43101368  T
Q  306 ttacaaca 313  Q
    || |||||    
T  43101367 tttcaaca 43101360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 314
Target Start/End: Complemental strand, 44461165 - 44461055
Alignment:
Q  204 caagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacccca 303  Q
    ||||||| ||||||| || || | ||||||||| |||||||||||| |||||||| | |||||||||  |||| |||||||||| ||||||  ||| |||    
T  44461165 caagtcccacatcgggtaaataacactcttgataagagtttataaagaggagacattcctcaccttgtgaatcagttttgtaaggatgagttggactcca 44461066  T
Q  304 aattacaacag 314  Q
    |||| ||||||    
T  44461065 aatttcaacag 44461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 53761514 - 53761432
Alignment:
Q  186 tctttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||||| |||||||||||||||||| || |||||||||| |||| |||||| |||||||||||| ||||| || | |||||||    
T  53761514 tctttactgggaaaaacccaagtcccacttcggatagataagacccttgataagagtttataaagaggaggcactcctcacct 53761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 42258902 - 42259019
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||  ||||| |||||| ||||| |||| |||||||| |||  || ||||| ||| |    
T  42258902 tattgggaaaaatccaagtcccacatcggatagataagattcttgagaagagtatataaagaggaggcaatcctcaccttacaagccgattttgcaagga 42259001  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || | |||||||    
T  42259002 tgagttaggctccaaatt 42259019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 44145217 - 44145116
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| ||||||| ||||||||||| | |||||||||| |||||||||| ||||||||  || | |||||| |||| |||| | ||||||||||    
T  44145217 agtcccacatcagatagataagactcttgataatagtttataaagaggagacaatactcaccttataagttggttttataaggatgatttagaccccaaa 44145118  T
Q  306 tt 307  Q
    ||    
T  44145117 tt 44145116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 12800089 - 12800205
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||| ||||||| || || ||||||| ||||||||||| | | ||||| |||||||  |||| ||||||||||||| | ||||| |||  |||||| |    
T  12800089 aaaaactcaagtcccacgtcagatagataagactcttgataaaaatttattaaaaggaagcaatcctcaccttgcaaacccgttttataaagatgagtta 12800188  T
Q  297 gaccccaaattacaaca 313  Q
    ||||||||||| |||||    
T  12800189 gaccccaaatttcaaca 12800205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 44145506 - 44145403
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| |||||||||||||  |||||||||| |||| ||||||||||||| || | ||||||||  ||  ||||| |||||| |    
T  44145506 tattgggaaaaacccaaatcccacatcggatagatatgactcttgataagag-ttataaaaaggaggcactcctcaccttataagccggttctgtaagga 44145408  T
Q  290 tgagt 294  Q
    |||||    
T  44145407 tgagt 44145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 4256242 - 4256349
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||| ||| | ||||||||  |||||||||||| |||||||| | ||||  || ||| |||||||| ||||||||||| || |||||||    
T  4256242 agtcccacatcggatggataacactcttgagaagagtttataaagaggagacactcctcattttacaagtcggttttttaagaatgagttaggccccaaa 4256341  T
Q  306 ttacaaca 313  Q
    || |||||    
T  4256342 tttcaaca 4256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 22407553 - 22407430
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| | |||||| ||||||||||||  | ||||| ||  ||||| |||||| ||||| || | |||||||| |||  |||||||||||| |    
T  22407553 tattgggaaaaatctaagtcccacatcggatagacaaaactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaagga 22407454  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  22407453 tgagttaggccccaaatttcaaca 22407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 25578792 - 25578714
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||||| ||||| |||||||||| | ||||||||||  |||||||    
T  25578792 tattgggaaaaacccatgtcccacatcggatagataagact-ttgataagagtttatatagaggagacaatcttcacctt 25578714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 26366731 - 26366846
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||||||| ||||||||||||  ||||||||||  |||||||||||| | ||| |||| |||||||| ||   || ||||||||| |||||| ||    
T  26366731 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaatatgaggcaatcctcaccttacatgccgtttttgtaaggatgagttag 26366830  T
Q  298 accccaaattacaaca 313  Q
     |||| |||| |||||    
T  26366831 gcccccaatttcaaca 26366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 29763799 - 29763685
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |||||||||||| |||||||| | | || |||   || |||||||||||| |||| | ||    
T  29763799 aaaacccaa-tcccacatcggatagataagactcttgataagagtttataaagaggagacactccccatcttatgaaccggttttgtaaggatgaattag 29763701  T
Q  298 accccaaattacaaca 313  Q
    |||| ||||| |||||    
T  29763700 accctaaatttcaaca 29763685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 34992868 - 34992939
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||||||||||||| ||||| ||||||| ||||||||||  |||||||||||| ||||| |||| |||||||    
T  34992868 aaaaacccaagtcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcacct 34992939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 35358565 - 35358486
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| |||||||  ||||| ||||||| ||||||||||  | ||| ||||||||||||||||| ||||||||    
T  35358565 tattgggaaaaatccaagtctcacatcagatagataagactcttgaaaaaagtatataaaaaggagacaatcctcacctt 35358486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 40927026 - 40927097
Alignment:
Q  194 gggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||    
T  40927026 gggaaaaatccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctca 40927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 47702536 - 47702461
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||  ||||| ||| || ||||| |||| ||||    
T  47702536 tattgggaaaaacacaagtcccacatcggatagatgagactcttgagaagagtatatgaagaggaggcaatcctca 47702461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 26926904 - 26926978
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||| ||| |||| ||||| ||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  26926904 ggaaaaaaccatgtcccacatcagatagataagactcttgataagagtttatatagaggagacaatcctcacctt 26926978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 29369793 - 29369839
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgat 236  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  29369793 tattgggaaaaacccaagtcccacatcggatagataagactcttgat 29369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 16078949 - 16078852
Alignment:
Q  216 cggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||| ||||||||||| | |||||||| ||||||| ||||  ||||||||||| |||||||| ||||  ||||| || |||| |||| |||||    
T  16078949 cggatagataagactcttgataaaagtttatataaaggaggcaatcatcaccttgcaagtcggttttttaaggttgagttaggcccccaatttcaaca 16078852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 21832803 - 21832686
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||| | ||||||| ||||||||||||  ||||||||||  |||||||||||  |||||||||| ||||||||  |    ||||||||||| |    
T  21832803 tattggaaaaatctcaagtcccacatcggatagacaagactcttgagaagagtttataaggaggagacaatcctcaccttatatgctggttttgtaagga 21832704  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||||||||    
T  21832703 tgagttaggccccaaatt 21832686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 39269498 - 39269567
Alignment:
Q  196 gaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    |||||| ||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||    
T  39269498 gaaaaatccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctca 39269567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 42637860 - 42637791
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    |||||||||||||| ||  ||| |||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  42637860 ttattgggaaaaactcatatcccacattggatagataagactcttgataagagtttatataaaggagaca 42637791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5440569 - 5440633
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||||||||||||||| | ||||||||||||  ||||||||||  |||||||||||| ||||    
T  5440569 tattgggaaaaacccaagttccacatcggatagacaagactcttgagaagagtttataaagagga 5440633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 34992576 - 34992644
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    |||||||||||||| ||||| ||||||| ||||||||||  |||||||||||| ||||| |||| ||||    
T  34992576 aaaaacccaagtcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctca 34992644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 21832311 - 21832188
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| ||| |||| |||||  ||||||||||||  ||||||||||  | |||||||||| | ||| |||| |||||||  |||  |||||||||||| |    
T  21832311 tattgagaacaacctaagtctcacatcggatagacaagactcttgagaaaagtttataaagatgaggcaatcctcacctcacaagccggttttgtaagga 21832212  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  21832211 tgagttaggccccaaatttcaaca 21832188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 40926695 - 40926774
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| ||||| | | |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||| ||||    
T  40926695 tattggaaaaaatcaatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctctcctt 40926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 54369047 - 54369154
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| ||||| || | ||||| || |||| |||||| ||||| |||||| || ||||| |    
T  54369047 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcactttacaaaccggtttcgtaaggatgagttaggccccata 54369146  T
Q  306 ttacaaca 313  Q
    || |||||    
T  54369147 ttccaaca 54369154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 26915108 - 26915178
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaat 260  Q
    |||||| |||||| ||||||| | ||| ||||||| ||||||||||| |||||||||| | ||||||||||    
T  26915108 tattggaaaaaactcaagtcccagatcagatagataagactcttgataagagtttatatagaggagacaat 26915178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 42604905 - 42604959
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||| |||||||  ||||||||||||||||||||||||||  ||||||||||    
T  42604905 ggaaaaatccaagtctcacatcggatagatgagactcttgatggaagtttataaa 42604959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 44573966 - 44574052
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| ||||||    
T  44573966 actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaacag 44574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 21833516 - 21833640
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||| ||||||||||||||| |||| ||||| |  ||||||| ||  |||||||||||| ||||| |||| || | | | |||  |||||| ||||| |    
T  21833516 tattgagaaaaacccaagtcccacattggataaacaagactctggagaagagtttataaagaggaggcaatccttagcctacaagccggtttcgtaagga 21833615  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  21833616 tgagttaggccccaaatttcaacag 21833640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 24539161 - 24539261
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagag-tttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaa 304  Q
    ||||||||||| | ||||| ||||||||||| |||| ||| |||| |||||||| | |||||||| |||  || ||||||||| |||||| || ||||||    
T  24539161 agtcctacatcagttagataagactcttgataagagttttgtaaagaggagacactcctcaccttacaagccgattttgtaaggatgagttaggccccaa 24539260  T
Q  305 a 305  Q
    |    
T  24539261 a 24539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 39018903 - 39018827
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctca 265  Q
    ||||||||||||||    |||| ||||||||||||| |||||||||||  ||||||||| | |||||||||| ||||    
T  39018903 ttattgggaaaaacttttgtcccacatcggatagataagactcttgataggagtttatatagaggagacaatcctca 39018827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 51836411 - 51836290
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| || ||| | || |||||| ||||| | || |||||  |||||||| |||||||| | |||||||  ||| | |||||| ||||||    
T  51836411 tattgggaaaaacctaaatcccatattggatagttgagattttttatgag--tttataaataggagacactcctcacctcacaagttggttttataagaa 51836314  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||| | |||||||||||| |||||    
T  51836313 tgaattagaccccaaatttcaaca 51836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 3985781 - 3985880
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||| ||||  |||||||||||| ||||  || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  3985781 agtcccacatcggatagatatgacttttgagaagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 3985880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 21750483 - 21750590
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| ||||| || | |||||||| |||  | |||||||||| |||||| || |||||||    
T  21750483 agtcccacatcggttagataggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaa 21750582  T
Q  306 ttacaaca 313  Q
    || |||||    
T  21750583 tttcaaca 21750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 34715551 - 34715444
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||| ||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| |  |||||||    
T  34715551 agtcccacatcggatagatagcacttttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttatgccccaaa 34715452  T
Q  306 ttacaaca 313  Q
    || |||||    
T  34715451 tttcaaca 34715444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 42311207 - 42311270
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||||||||||||||| |||||||||||||  || || |||| | |||||||||| |||||    
T  42311207 ttgggaaaaacccaagtcccacatcggatagataggaatcctgataaaagtttataaagaggag 42311270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 44573679 - 44573754
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  44573679 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 46139246 - 46139341
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||| |||||||| | ||||||||  | |||||||||| ||| ||||| |||||| || |||    ||||||||||||||||| ||||||||||||    
T  46139246 acattggatagataacactcttgagaaaagtttataaagaggggacaaatctcactttacaagctagttttgtaagaatgagttagaccccaaatt 46139341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 13769387 - 13769286
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||| ||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||   ||||||||||| |||||| || |||||||    
T  13769387 agtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggccccaaa 13769288  T
Q  306 tt 307  Q
    ||    
T  13769287 tt 13769286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 27219337 - 27219418
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  ||||||||||||    
T  27219337 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 27219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 37040073 - 37040016
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| | |||| ||||||||||| |||||| ||| | |||||||||||||||||||    
T  37040073 acatcgaaaagataagactcttgataagagttaatatagaggagacaattctcacctt 37040016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 14170095 - 14170007
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||| || | ||||||||  ||| |||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  14170095 agtcccacatcggataaataacactcttgagaagattttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 14170007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 44573334 - 44573422
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||| | |||  |||||||||||| ||||||    
T  44573334 agtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccctacaagccggttttgtaaggatgagt 44573422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 3435599 - 3435412
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||| |||||  ||||||| ||||||||||||| ||||||||||  |||||||||| | ||||| |||| |||||||| |||| ||||||||||||     
T  3435599 ttattggaaaaaattcaagtcccacatcggatagataagactcttgagaagagtttatacagaggaggcaatcctcaccttacaaaccggttttgtaagg 3435500  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || ||||||||||||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  3435499 atgagttaggccccaaattacaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 3435412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 189 - 375
Target Start/End: Original strand, 12431889 - 12432076
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| |||||||||| |||||||| |||  ||||||||||||     
T  12431889 ttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagg 12431988  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||||  || ||||||||| ||||| ||||| | | ||| || |||| |||| | |||||||| |||||| ||||||| || ||||||    
T  12431989 atgagctaggccccaaatttcaacatggtatcaaagcttgtcaaattcaagggccgcctaaacctattcatgcaccaagcccaaagag 12432076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 33986087 - 33985901
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  33986087 tattgggaaaaacccaactcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 33985988  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     ||||  | ||||| ||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  33985987 agagttgggccccagatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 33985901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 365
Target Start/End: Original strand, 29684003 - 29684179
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||||||  |||| ||||||  ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  29684003 tattgggaaaaacccaagtcccgcatcagatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 29684102  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    | ||| ||| |||||||| ||| | ||||| ||| ||| ||||||| ||||||  ||||||||||||||||||||||    
T  29684103 taagttagaacccaaatttcaatatggtatcagagcttgtcgaattcaaggaccacctaaacttattcacgcaccaa 29684179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 17727396 - 17727513
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| || || |||| |||||||| |||  |||||||||||| |    
T  17727396 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaagga 17727495  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||||||||    
T  17727496 tgagttaggccccaaatt 17727513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 20999102 - 20998977
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||||||     
T  20999102 ttattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 20999003  T
Q  289 atgagtcagaccccaaattacaacag 314  Q
    |||||| || |||| |||| ||||||    
T  20999002 atgagttaggcccccaatttcaacag 20998977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 883713 - 883609
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  883713 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 883614  T
Q  290 tgagt 294  Q
    |||||    
T  883613 tgagt 883609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 884049 - 884146
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||| ||||| |||| |||||||| |||  ||||||||||||    
T  884049 tattgggaaaaacccaagtcccacatcggatagatgagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaag 884146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 32667175 - 32667300
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| |||||| ||||| ||||||| ||||||||||| |||||||||| | ||||| |||| || ||||| |||  |||||||||||| |    
T  32667175 tattgggaaaaaccgaagtcccacatcagatagataagactcttgataagagtttatatagaggaggcaatccttaccttacaagccggttttgtaagga 32667274  T
Q  290 tgagtcagaccccaaattacaacagg 315  Q
    ||||| || ||||||||| |||||||    
T  32667275 tgagttaggccccaaatttcaacagg 32667300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 16006969 - 16007093
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||||| |||||  ||| |||||||| |||  |||||||||||| |    
T  16006969 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaagga 16007068  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| |||||||||| | ||||||    
T  16007069 tgagttagaccccaaagttcaacag 16007093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 375
Target Start/End: Original strand, 29101749 - 29101929
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaa-aggagacaattctcaccttgcaaatcggttttgtaagaatgagtc 295  Q
    |||||| ||||||| ||||||||||||  |||| |||||  ||||||||||||| |||||||||| || ||||  |||  ||||||| |||| ||||||     
T  29101749 aaaaactcaagtcccacatcggatagacaagacacttgagaagagtttataaaagaggagacaatccttacctcacaagccggttttataaggatgagtt 29101848  T
Q  296 agaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    || || |||||| ||||| ||||| ||| |||||| |||| || | | |||||||| ||||||||||||||||||||||||    
T  29101849 aggcctcaaatttcaacatggtatcagaccttatcaaattcaaaggccgcctaaacctattcacgcaccaaacctaaagag 29101929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 27545228 - 27545117
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| ||||| ||| |||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||| |||||||||||| |    
T  27545228 tattggaaaaaatccatgtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaagga 27545129  T
Q  290 tgagtcagaccc 301  Q
    ||||| ||||||    
T  27545128 tgagttagaccc 27545117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 34775349 - 34775472
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  ||| |||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  34775349 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 34775448  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  34775449 tgagttaggcccccaatttcaaca 34775472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 375
Target Start/End: Original strand, 883847 - 884028
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||||||||||||| | ||||||||||  ||||||||||  ||||||||||||   ||| |||| |||||||| |||  |||||||||||| ||||||    
T  883847 ggaaaaacccaagtcccatatcggatagacaagactcttgagaagagtttataaaggagaggcaatcctcaccttacaagccggttttgtaaggatgagt 883946  T
Q  295 cagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
     || |||| ||||  |||| ||||| | | ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  883947 taggcccccaattttaacatggtatcaaagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 884028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 33985881 - 33985759
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||  ||||  |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  33985881 tattggcaaaaacccaagtcccacatcggatagataagactcttgagaagag--tataaagaggaggcaatcctcaccttacaagccggttttgtaagga 33985784  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  33985783 tgagttaggccccaaatttcaacag 33985759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 12432097 - 12432220
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| ||||| |||||||| ||||||||||||| ||| ||||||  |||||||||||| ||||| |||| |||||||| ||||| |||||| |||| |    
T  12432097 tattggaaaaaatccaagtcccacatcggatagataagaatcttgagaagagtttataaagaggaggcaatcctcaccttacaaattggttttttaagga 12432196  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| ||  |||||||| |||||    
T  12432197 tgagttaggtcccaaatttcaaca 12432220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 25621397 - 25621274
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||  ||||| |||||| |||| ||||  |||||||| |||  |||||||||||| |    
T  25621397 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtatataaagaggaaacaaccctcaccttacaagccggttttgtaagga 25621298  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  25621297 tgagttaggcccccaatttcaaca 25621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 31761124 - 31761247
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| |||||| ||||||||||||| ||||| ||||  |||||||||| | | ||| |||| |||||||| ||| | ||||||||||| |    
T  31761124 tattgggaaaaacctaagtcccacatcggatagataagacttttgagaagagtttatatagaagaggcaatcctcaccttacaagttggttttgtaagga 31761223  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  31761224 tgagttaggccccaaatttcaaca 31761247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 19860029 - 19860131
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| | |||||| |||  |||||||||||| |    
T  19860029 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatccacaccttacaagccggttttgtaagga 19860128  T
Q  290 tga 292  Q
    |||    
T  19860129 tga 19860131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 6183456 - 6183355
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    |||||||||||||   ||||||||  |||||||||||| |||||||| |||||||||| |||  |||||||||||| |||||| |||||||||||| |||    
T  6183456 acatcggatagatagtactcttgagaagagtttataaagaggagacacttctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 6183357  T
Q  312 ca 313  Q
    ||    
T  6183356 ca 6183355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 39386661 - 39386766
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||||||   ||  |||||||||||     
T  39386661 ttattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggaggcaatcctcaccttatgaactggttttgtaagg 39386760  T
Q  289 atgagt 294  Q
    ||||||    
T  39386761 atgagt 39386766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 32666969 - 32667085
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||||||||||  ||| ||||| || ||||||||||| |||||||||| | ||||| ||||||| ||||| |||  |||||||||||  |    
T  32666969 tattgggaaaaacccaagtccctcattggataaataagactcttgataagagtttatatagaggaggcaattcttaccttacaagccggttttgtaatga 32667068  T
Q  290 tgagtcagaccccaaat 306  Q
    ||||| || ||||||||    
T  32667069 tgagttaggccccaaat 32667085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 6986528 - 6986449
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| ||||||||    
T  6986528 tattgggaaaaatccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcacctt 6986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 12419829 - 12419896
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggaga 256  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||||    
T  12419829 ttattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaga 12419896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 40009966 - 40010089
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||  ||||  || ||| ||||| |||| |||||||| |||  |||||||||||| |    
T  40009966 tattgggaaaaacccaagtcccacatcggatagataaaactcttgagaagagcatagaaagaggaggcaatcctcaccttacaagccggttttgtaagga 40010065  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    || || || ||||||||| |||||    
T  40010066 tgtgttaggccccaaatttcaaca 40010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 29695451 - 29695373
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||||| || ||||||| |||||||    
T  29695451 tattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagtttataaagagtagacaatcctcacct 29695373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 294
Target Start/End: Complemental strand, 7257721 - 7257616
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||| | |||||| | ||||||||||| ||||||||||  | |||||||||| ||||  |||| |||||||| ||| |||||||||||||     
T  7257721 ttattgggaaaaatctaagtcccatatcggatagataagactcttgagaatagtttataaagaggatgcaatcctcaccttacaagtcggttttgtaagg 7257622  T
Q  289 atgagt 294  Q
    ||||||    
T  7257621 atgagt 7257616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 8044658 - 8044534
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaa-aggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||||||| ||||| || | ||||||||   || | ||||||||||     
T  8044658 tattgggaaaaacccaagtcccgcatcagatagataagactcttgataagagtttataaaagaggaggcactcctcaccttatgaaccagttttgtaagg 8044559  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| ||  |||||||| |||||    
T  8044558 atgagttaggtcccaaatttcaaca 8044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 3976567 - 3976460
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| | | ||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  3976567 agtcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 3976468  T
Q  306 ttacaaca 313  Q
    ||||||||    
T  3976467 ttacaaca 3976460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 19859916 - 19859987
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaat 260  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| ||||    
T  19859916 ttattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaat 19859987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 29676286 - 29676383
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaag 287  Q
    ||||||||||||| || |||  ||||||||||||| ||||||||||| |||||||||| | ||||| |||| ||||||||   || ||||||||||||    
T  29676286 tattgggaaaaacacatgtctcacatcggatagataagactcttgataagagtttatatataggagtcaatcctcaccttaagaaccggttttgtaag 29676383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 18901960 - 18901852
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| ||||||||||  |||||||||||| ||||| || |  ||||||| |||  | ||||||||||||||||  || |||||||    
T  18901960 agtcccacatcggatagataagactcttgaaaagagtttataaagaggaggcactcttcaccttacaagcctgttttgtaagaatgagataggccccaaa 18901861  T
Q  306 ttacaacag 314  Q
    || ||||||    
T  18901860 tttcaacag 18901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 10570927 - 10571021
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||| ||||||  |||| ||||  ||||||| |||  |||||||||    
T  10570927 tattgggaaaaacccaagtcccacatcagatagataagactcttgagaagagtatataaagtggaggcaatcttcaccttacaagccggttttgt 10571021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 26847349 - 26847276
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||| |||| ||||||||  |||||||||| |||||||||||| | |||||| ||||||||||    
T  26847349 ggaaaaacccaagtcccacattggatagataggactcttgataagagtttataaaga-gagacacttctcacctt 26847276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 4721911 - 4721846
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaat 260  Q
    ||||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | ||||| ||||    
T  4721911 ggaaaaacccatgtcccacatcggatagattagactcttgataagagtttatatagaggaggcaat 4721846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 10429772 - 10429848
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| |||||||||||| |||||||| | |||| ||| |||  |||||||||||| |||||| ||||||||||||    
T  10429772 cttgataagagtttataaagaggagacactcctcatcttacaagccggttttgtaaggatgagttagaccccaaatt 10429848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 10537005 - 10536925
Alignment:
Q  226 agactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaat 306  Q
    ||||||||||||||||||||||| |||||| || ||||||||||   || |||||||| ||| |||||| || ||||||||    
T  10537005 agactcttgatgagagtttataagaaggaggcacttctcaccttatgaaccggttttgcaaggatgagttaggccccaaat 10536925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 10542175 - 10542071
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| ||||||| ||||  |||||||   ||||||||| |||||||||||| |||||||| | |||| ||| |||   ||||||||||| |    
T  10542175 tattgggaaaaactcaagtcccacattagatagattgaactcttgataagagtttataaagaggagacactcctcatcttacaagctggttttgtaagga 10542076  T
Q  290 tgagt 294  Q
    |||||    
T  10542075 tgagt 10542071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 22447297 - 22447361
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    |||||||||||||||||||||||||| | |||||| ||||| ||||| ||||||| |||| ||||    
T  22447297 tattgggaaaaacccaagtcctacattgaatagataagacttttgataagagtttttaaagagga 22447361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 33277636 - 33277548
Alignment:
Q  219 atagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| ||| | ||||| | |||||||||||| ||| ||||||||||||| ||| || |||||||||  |||||| ||||||||||||    
T  33277636 atagataagattattgataaaagtttataaaaatgagtcaattctcaccttacaagtcagttttgtaaagatgagttagaccccaaatt 33277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 42768428 - 42768323
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||||||||| |  |||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  42768428 agtcccacatcggatagataa--ctcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 42768331  T
Q  306 ttacaaca 313  Q
    || |||||    
T  42768330 tttcaaca 42768323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 3977099 - 3976992
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | ||||  || |||  |||||||||||| |||||| || |||||||    
T  3977099 agtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaaattacaagccggttttgtaaggatgagttaggccccaaa 3977000  T
Q  306 ttacaaca 313  Q
    ||||||||    
T  3976999 ttacaaca 3976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 15820151 - 15820100
Alignment:
Q  263 tcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||| ||||||    
T  15820151 tcaccttacaagtcggttttgtaagaatgagttagaccccaaatttcaacag 15820100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 23054334 - 23054441
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  23054334 agtcccacatcagatagatataactcttgagaagagtttataaagaggaggcactcctcaccttacaagacggttttgtaaggatgagttaggccccaaa 23054433  T
Q  306 ttacaaca 313  Q
    || |||||    
T  23054434 tttcaaca 23054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 43195792 - 43195899
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || |||||||    
T  43195792 agtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 43195891  T
Q  306 ttacaaca 313  Q
    || |||||    
T  43195892 tttcaaca 43195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 7877852 - 7877938
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatga 292  Q
    |||||||||||||||||||   ||||| ||  |||||||||||| |||||||| | |||||||| |||  |||||||||||| ||||    
T  7877852 agtcctacatcggatagatagcactctcgagaagagtttataaagaggagacactcctcaccttacaagccggttttgtaaggatga 7877938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 10849564 - 10849486
Alignment:
Q  229 ctcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||| |||||||||||| ||||| || | |||||||| ||| | ||||||||||| |||||| || |||||||||    
T  10849564 ctcttgataagagtttataaagaggaggcactcctcaccttacaagttggttttgtaaggatgagttaggccccaaatt 10849486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 29684211 - 29684333
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||| |  |||||  ||||  | ||||||||  ||||| |||||| ||||| |||| |||||||| |||| || |||| ||||||    
T  29684211 tattgggaaaaacccaagttccgcatcgattagacaaaactcttgagaagagtatataaagaggaggcaatcctcaccttacaaaacgattttataagaa 29684310  T
Q  290 tgagtcagaccccaaattacaac 312  Q
    ||||| || || |||||| ||||    
T  29684311 tgagttaggcctcaaatttcaac 29684333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 39108080 - 39108230
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||  ||||||| ||||| |||| || ||| ||||||| |||||||||| | |||||  |||  ||||||| |||  || ||||||||| |    
T  39108080 tattgggaaaaattcaagtcccacatcagatatataagaatcttgataagagtttatatagaggaggtaatcatcaccttacaatccgattttgtaagga 39108179  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    |||||||| || ||| || ||||| ||||| ||| ||| ||||||| ||||    
T  39108180 tgagtcaggcctcaagtttcaacatggtatcagagcttgtcgaattcaagg 39108230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 14127301 - 14127240
Alignment:
Q  188 tttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    |||||||||||||||| |||||| ||||| |||| || ||||||||||| ||| ||||||||    
T  14127301 tttattgggaaaaaccgaagtcccacatcagataaataagactcttgataagaatttataaa 14127240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 18607366 - 18607273
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggtttt 282  Q
    |||||||||||||| ||||||  ||||||||||||  |||||||| |  ||||| |||||| |||||  |||||||||||| | || |||||||    
T  18607366 ttattgggaaaaacacaagtctcacatcggatagacaagactcttaagaagagtatataaagaggaggtaattctcaccttacgaaccggtttt 18607273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 21214275 - 21214190
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  21214275 actcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 21214190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 21734408 - 21734473
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||| |||||| |||||    
T  21734408 tattgggaaaaacccacatcccacatcggatagataagactcttgagaagagtatataaagaggag 21734473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 10485222 - 10485278
Alignment:
Q  226 agactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggtttt 282  Q
    |||||||||||||||||||||| | |||||||||| |||||||| | || |||||||    
T  10485222 agactcttgatgagagtttatatagaggagacaatcctcaccttacgaaccggtttt 10485278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 29695563 - 29695471
Alignment:
Q  284 taagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    |||| |||||| || |||||||||  |||| ||||| ||| ||| ||||||| |||| |||||||||| |||||||||||||| || ||||||    
T  29695563 taaggatgagttaggccccaaattttaacatggtatcagagcttgtcgaattcaagggctgcctaaacctattcacgcaccaagcccaaagag 29695471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 39108398 - 39108470
Alignment:
Q  241 gtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||| | |||||||||| ||||||||  ||| |||||||||||| |||||| |||||||| ||| |||||    
T  39108398 gtttatatagaggagacaatcctcaccttataaaccggttttgtaaggatgagttagaccccatatttcaaca 39108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 25286356 - 25286257
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||||| |||||  ||  |||||| |||||||||||| |||| ||| | |||||||| |||  |||||||||||| |||||| || |||||||    
T  25286356 agtcccacatcggttagattggaagcttgatcagagtttataaagaggaaacactcctcaccttacaagccggttttgtaaggatgagttaggccccaaa 25286257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 28895519 - 28895629
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||||||| ||| |||| | | ||||  | |||| ||| ||||||||||||||| ||||| | |||||||| |||  |||||||||||| |    
T  28895519 tattggaaaaaacccaaatcccacattgaaaagatagggctctagataagagtttataaaaag-agacactcctcaccttacaagccggttttgtaagga 28895617  T
Q  290 tgagtcagaccc 301  Q
    ||||| ||||||    
T  28895618 tgagttagaccc 28895629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 32810965 - 32810894
Alignment:
Q  213 catcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||  || ||||||| |||||||||||| ||||||||||  ||||||| |||  |||||||||    
T  32810965 catcggatagataggattcttgataagagtttataaagaggagacaatcatcaccttacaagccggttttgt 32810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 43169250 - 43169361
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  | |||||||||| | |||| || ||||| |    
T  43169250 agtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctttcaagccagttttgtaaggaagagttaggccccata 43169349  T
Q  306 ttacaacaggta 317  Q
    || |||||||||    
T  43169350 tttcaacaggta 43169361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 10485170 - 10485216
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgat 236  Q
    |||||||||||| ||| |||| ||||||||||||| |||||||||||    
T  10485170 tattgggaaaaatccatgtcccacatcggatagataagactcttgat 10485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 17265079 - 17265009
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    |||||||| |||| ||||||||||||| ||||||||| | | |||||||| | ||||| |||| |||||||    
T  17265079 aaaacccatgtcccacatcggatagataagactcttggtaaaagtttatatagaggaggcaatcctcacct 17265009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 37812330 - 37812272
Alignment:
Q  255 gacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||  ||| ||| ||||||||| |||||| ||||||||||||||||||    
T  37812330 gacaatcctcacctcacaagtcgattttgtaaggatgagttagaccccaaattacaaca 37812272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 38760421 - 38760315
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    |||||||||||||  |||| | |||||  |||||||||| |||||||||||| ||||| || |  ||||||| |||  |||||||||||  |||||| ||    
T  38760421 aaaacccaagtcccgcatcaggtagataggactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaacgatgagttag 38760322  T
Q  298 accccaa 304  Q
     ||||||    
T  38760321 gccccaa 38760315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 39108277 - 39108335
Alignment:
Q  255 gacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||| |||  |||||||||||| |||||||||||||||| || |||||    
T  39108277 gacaatcctcaccttacaagccggttttgtaaggatgagtcagaccccaagtttcaaca 39108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 11969060 - 11969161
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| || ||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||| |||    
T  11969060 agtcccacgtcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcccaaaa 11969159  T
Q  306 tt 307  Q
    ||    
T  11969160 tt 11969161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 5424822 - 5424770
Alignment:
Q  262 ctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaacag 314  Q
    |||||||| |||  |||||||||||| |||||| |||||||||||| ||||||    
T  5424822 ctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaacag 5424770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 6986376 - 6986428
Alignment:
Q  217 ggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||| ||||||||||   ||||||||||| |||||||||| ||||||||    
T  6986376 ggatagataagactcttgagaggagtttataaagaggagacaatcctcacctt 6986428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 7257200 - 7257088
Alignment:
Q  240 agtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgag-tcagaccccaaattacaaca-ggtattagaacttatcgaatttaa 337  Q
    |||||||||| ||||  |||| |||| ||| ||||||||||||||||| ||||| | || |||| |||| ||||| ||||| ||| ||| ||||||| ||    
T  7257200 agtttataaagaggatgcaatcctcatcttacaaatcggttttgtaaggatgagtttaggcccccaatttcaacatggtatcagagcttgtcgaattcaa 7257101  T
Q  338 ggactgcctaaac 350  Q
    || | ||||||||    
T  7257100 gggccgcctaaac 7257088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 13839371 - 13839247
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||| |||||||| |||||   ||||||||||||  ||||||||||  ||||||| |||| | ||| |||| |||||||| |||  ||||||||| |  |    
T  13839371 tatttggaaaaactcaagtttcacatcggatagacaagactcttgagaagagtttctaaagatgaggcaatcctcaccttacaatccggttttgtgatga 13839272  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
     |||| ||||| |||||| ||||||    
T  13839271 cgagttagacctcaaatttcaacag 13839247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 21213981 - 21213893
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||| ||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  21213981 agtcccacattggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 21213893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 22447178 - 22447222
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaacaggtatta 320  Q
    |||||||||||| |||||| |||||||||||| ||||| ||||||    
T  22447178 cggttttgtaaggatgagttagaccccaaatttcaacatgtatta 22447222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 9e-37; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 29273337 - 29273151
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||||  |||| |||| |||||||| |||  |||||||||||| |    
T  29273337 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaaggggaggcaatcctcaccttacaagccggttttgtaagga 29273238  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  29273237 tgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 29273151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 380
Target Start/End: Complemental strand, 39649196 - 39649005
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  39649196 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 39649097  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagagagatg 380  Q
    ||||| |  ||||||||| |||||   ||| ||| ||| || |||| |||| | |||||||| |||||||||||||| || |||||| ||||    
T  39649096 tgagttatgccccaaatttcaacataatatcagagcttgtcaaattcaagggccgcctaaacctattcacgcaccaagcccaaagagtgatg 39649005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 365
Target Start/End: Complemental strand, 43361861 - 43361693
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||  |||| |||||||| |||  |||||||||||| |||||| ||    
T  43361861 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagttag 43361762  T
Q  298 accccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    ||||  |||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||||||    
T  43361761 accctcaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaa 43361693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 1233918 - 1234041
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||  |||   |||||||| |  |    
T  1233918 tattggtaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagctggttttgtgatga 1234017  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |||||||||||| |||||    
T  1234018 tgagttagaccccaaatttcaaca 1234041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 41812765 - 41812647
Alignment:
Q  195 ggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||||||||||||  |||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||| || ||| |||||||||| || ||||||    
T  41812765 ggaaaaacccaagtctcacattggataaatgagactcttgatgagagtttataaagaggagacacttctcactttacaagtcggttttgtgaggatgagt 41812666  T
Q  295 cagaccccaaattacaaca 313  Q
     |||||| ||||| |||||    
T  41812665 tagacccgaaatttcaaca 41812647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 212 - 375
Target Start/End: Original strand, 15391833 - 15391997
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaa 311  Q
    ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  | |||||||||| |||||| || ||||||||| |||    
T  15391833 acatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagtaaggccccaaatttcaa 15391932  T
Q  312 ca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    || ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  15391933 catggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 15391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 375
Target Start/End: Complemental strand, 21428380 - 21428192
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||| |||||| ||||||| || |||| ||| ||||||| |||||||||| | |||||||||| || ||||| ||| ||||| |||| ||     
T  21428380 ttattgggaaaaagccaagttctacatcagaaagataagattcttgataagagtttatacagaggagacaatccttaccttacaagtcggtattgtgagg 21428281  T
Q  289 atgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcct-aaacttattcacgcaccaaacctaaagag 375  Q
    |||||| || ||||||||| ||||| ||||||||| ||| ||||||| |||| | || | |||| |||||||||||||| || ||||||    
T  21428280 atgagttaggccccaaatttcaacatggtattagagcttgtcgaattcaagggccgcttaaaacatattcacgcaccaagcccaaagag 21428192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 52846961 - 52846838
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| |||||||| |||  |||||||||||| |    
T  52846961 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaagga 52846862  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |  ||||||||| |||||    
T  52846861 tgagttaagccccaaatttcaaca 52846838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 187 - 313
Target Start/End: Original strand, 5222683 - 5222809
Alignment:
Q  187 ctttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaa 286  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||||||| |||||||||  | |||||||||| |||||||| |||  ||||||| |||    
T  5222683 ctttattgggaaaaacctaagtcccacatctgatagataagactcttgataagagtttatgtagaggagacaatcctcaccttacaagccggttttataa 5222782  T
Q  287 gaatgagtcagaccccaaattacaaca 313  Q
    | |||||| |||||| ||||| |||||    
T  5222783 ggatgagttagaccctaaatttcaaca 5222809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 15392017 - 15392139
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| |||||| ||||| |||| ||||| || |||  |||||||||||| |    
T  15392017 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaagga 15392116  T
Q  290 tgagtcagaccccaaattacaac 312  Q
    ||||| || ||||||||| ||||    
T  15392117 tgagttaggccccaaatttcaac 15392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 21428170 - 21428047
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||  |||||||||||| |||||||| ||||||||||| |||||||||| ||||| |||||| || ||||| |||| ||||||||| || |    
T  21428170 tattgggaaaaattcaagtcctacattggatagataagactcttgataagagtttatataaaggtgacaatccttaccttacaaaccggttttgtgagga 21428071  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || || |||||| |||||    
T  21428070 tgagttagccctcaaatttcaaca 21428047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 43361656 - 43361541
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||| |||||| ||    
T  43361656 aaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43361557  T
Q  298 accccaaattacaaca 313  Q
    ||||| |||| |||||    
T  43361556 acccccaatttcaaca 43361541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 22892800 - 22892683
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| |||||  ||| |||||||||||||||||| |||||||| |||||||| | ||| |||  |||  |||||||||||| |    
T  22892800 tattgggaaaaacccaagtcccacatcaaataaatgagactcttgatgagactttataaagaggagacactcctcgcctcacaagccggttttgtaagga 22892701  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||||| || |||||||||    
T  22892700 tgagttaggccccaaatt 22892683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 24382472 - 24382349
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| || | |||| ||  ||| |||||||||| |  |    
T  24382472 tattgggaaaaacccaaatccaacatcggataaatgagactcttgatgagagtttataaagaggaggcactcctcatctcacaagtcggttttgtgatga 24382373  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||| | || ||||||||| |||||    
T  24382372 tgaattaggccccaaatttcaaca 24382349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 48558433 - 48558310
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||  ||||| |||||| ||||  |||| |||||||| |||  |||||||||||| |    
T  48558433 tattgggaaaaacccaagtcccatatcggatagataagactcttgagaagagtatataaagaggaagcaatcctcaccttacaagccggttttgtaagga 48558334  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| |  ||||||||| |||||    
T  48558333 tgagttaagccccaaatttcaaca 48558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 38871267 - 38871117
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||| | |||||||||| ||||| || | ||||||||   || |||||||||||| |    
T  38871267 tattgggaaaaacccaagtcccacatcagatagataagactcttgataaaagtttataaagaggaggcactcctcaccttaagaaccggttttgtaagga 38871168  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaagg 339  Q
    || || || || |||||| ||||| ||||| ||| ||| ||||||| ||||    
T  38871167 tgcgttaggcctcaaatttcaacatggtatcagagcttgtcgaattcaagg 38871117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 2997168 - 2997044
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||||| |||||| ||||||||||||| | ||||||||  ||||| |||||| |||||  ||| |||||||  |||  |||||||||||| |    
T  2997168 tattgggaaaaacctaagtcccacatcggatagataaaactcttgagaagagtatataaagaggaggtaatactcacctcacaagccggttttgtaagga 2997069  T
Q  290 tgagtcagaccccaaattacaacag 314  Q
    ||||| || ||||||||| ||||||    
T  2997068 tgagttaggccccaaatttcaacag 2997044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 13959393 - 13959517
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||| ||| ||||||  ||||||||||||| ||||||||||  |||||||||||| |||| |||||| ||||||| |||   |||||| ||||     
T  13959393 ttattgggaataacgcaagtctcacatcggatagataagactcttgagaagagtttataaagaggatacaattttcaccttacaagctggttttttaagg 13959492  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || ||||||||| |||||    
T  13959493 atgagttaggccccaaatttcaaca 13959517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 29413340 - 29413419
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||| ||||| || | ||||||||    
T  29413340 tattgggaaaaacccaagtcctacttcgggtagataagactcttgataagagtttataaagaggaggcactcctcacctt 29413419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 52921579 - 52921500
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||||||||||| |||||||||||||   ||||||| |||||||||||||||||||| || | ||||||||    
T  52921579 tattgggaaaaacccaagtcccacatcggatagatagtactcttggtgagagtttataaaaaggaggcattcctcacctt 52921500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 21539046 - 21538929
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||||||||||| ||| |||| | |||||||| || ||||||||||  ||| |||||||| ||||| |||| |||||||| |||| |||||||||||| |    
T  21539046 tattgggaaaaatccatgtcccatatcggataaataagactcttgagaagaatttataaagaggaggcaatcctcaccttacaaaccggttttgtaagga 21538947  T
Q  290 tgagtcagaccccaaatt 307  Q
    ||| | || |||||||||    
T  21538946 tgatttaggccccaaatt 21538929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 307
Target Start/End: Complemental strand, 33342382 - 33342273
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||| |||||| |||||  ||  |||||||| |||  |||||||||||| |||||| ||    
T  33342382 aaaacccaagtcccacatcagatagatgagactcttgagaagagtatataaagaggaggtaaacctcaccttacaagccggttttgtaaggatgagttag 33342283  T
Q  298 accccaaatt 307  Q
    |||| |||||    
T  33342282 accctaaatt 33342273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 11018845 - 11018969
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    |||||||||||||  ||||||| ||||| ||||  | ||||||||||  |||||||||||| ||||||||||  || |||  ||||||| |||||||||     
T  11018845 ttattgggaaaaattcaagtcccacatcagataactaagactcttgagaagagtttataaagaggagacaatcttcccctcacaaatcgattttgtaagg 11018944  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| ||||| |||||| |||||    
T  11018945 atgagttagacctcaaatttcaaca 11018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 22826850 - 22826778
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  22826850 aaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcacctt 22826778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 39648989 - 39648906
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaa 274  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||  |||||||||||| ||||| |||| |||||||| ||||    
T  39648989 tattgggaaaaacccaagtcccacatcg-atagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaa 39648906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 2697427 - 2697320
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| | |||| ||||||||||    
T  2697427 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagttagaccccaaa 2697328  T
Q  306 ttacaaca 313  Q
    || |||||    
T  2697327 tttcaaca 2697320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 9380892 - 9381015
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||  | ||| || ||| || ||||||| |||||  | |||  |||||||||||| |    
T  9380892 tattgggaaaaacccaagtcccacatcggatagacaagactcttgagaatagtataaaaagagaagacaatcctcacaatacaagccggttttgtaagga 9380991  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || ||||||||| |||||    
T  9380992 tgagttaggccccaaatttcaaca 9381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 17419795 - 17419902
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| ||||||||||    
T  17419795 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttagaccccaaa 17419894  T
Q  306 ttacaaca 313  Q
    || |||||    
T  17419895 tttcaaca 17419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 29273111 - 29272992
Alignment:
Q  257 caattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttatt 355  Q
    |||| |||||||| |||  |||||||||||| |||||| || ||||||||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||    
T  29273111 caatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctatt 29273012  T
Q  356 cacgcaccaaacctaaagag 375  Q
    |||||||||| || ||||||    
T  29273011 cacgcaccaagcccaaagag 29272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 5325159 - 5325069
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaa 365  Q
    |||||||||||| |||||| |||| ||||||||||||| ||||| ||| ||||||||||| |||| | | |||||| ||||||||||||||    
T  5325159 cggttttgtaaggatgagttagactccaaattacaacatggtatcagagcttatcgaattcaagggccgtctaaacctattcacgcaccaa 5325069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 2997373 - 2997228
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||| |||||||| ||| ||| ||||||||||||| ||||||||||  ||||| |||||| | ||| |||| |||||||   ||  |||||||||||  |    
T  2997373 tattaggaaaaactcaaatcccacatcggatagataagactcttgagaagagtatataaagatgaggcaatcctcacctcataagccggttttgtaaaga 2997274  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatt 334  Q
    ||||| || ||||||||| ||||| ||||||||| ||| |||||||    
T  2997273 tgagttaggccccaaatttcaacatggtattagagcttctcgaatt 2997228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 4022221 - 4022114
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||  |||||||||  |||||||||||| ||||| || | |||||||| |||  | |||||||||| |||||| || |||||||    
T  4022221 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaa 4022122  T
Q  306 ttacaaca 313  Q
    || |||||    
T  4022121 tttcaaca 4022114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 45395543 - 45395602
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataa 248  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||| |||||||||||    
T  45395543 ttattgggaaaaacccaagtcccatatcagatagataagactcttgataagagtttataa 45395602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 24382263 - 24382193
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaat 260  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||  ||| ||| ||| |||||||||||    
T  24382263 tattgggaaaatcccaagtcccacatcggatagataagactcttgagaagaatttttaataaggagacaat 24382193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 49142674 - 49142767
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    ||||||||||||||||||||| |||| |||||||| ||||| ||||||| |||||||||| || ||| | || ||||||| |||  |||||||||    
T  49142674 tattgggaaaaacccaagtcccacattggatagataagact-ttgatgatagtttataaagagaagaaatttatcaccttacaagccggttttgt 49142767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 25799112 - 25799217
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgca-aatcggttttgtaaga 288  Q
    |||||||||||||||| |||| ||||| ||||||| | ||||||||  |||||||||||| ||| | |||| |||||||| || ||  |||||||||||     
T  25799112 tattgggaaaaacccatgtcccacatcagatagataaaactcttgagaagagtttataaagagggggcaatcctcaccttacagaactggttttgtaagg 25799211  T
Q  289 atgagt 294  Q
    ||||||    
T  25799212 atgagt 25799217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 38474291 - 38474379
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    |||||||||||||||||||  || ||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  38474291 agtcctacatcggatagataggattcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 38474379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 38871062 - 38870938
Alignment:
Q  190 tattgggaaaaaccc-aagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||||||| |||||| ||||| ||| ||| ||||||||||| | ||||||||||  |||| || | ||||||||   || ||||||||||||     
T  38871062 tattgggaaaaaccccaagtcccacatcagatcgataagactcttgataaaagtttataaagtggaggcactcctcaccttaagaaccggttttgtaagg 38870963  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || || |||||| |||||    
T  38870962 atgagttaggcctcaaatttcaaca 38870938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 8520189 - 8520082
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| |||||||||||||   ||||||||  |||||||||||| | ||| || | |||||||| |||  |||||||||||  |||||| ||||||||||    
T  8520189 agtcccacatcggatagatagcactcttgagaagagtttataaagaagaggcactcctcaccttacaagccggttttgtaaagatgagttagaccccaaa 8520090  T
Q  306 ttacaaca 313  Q
    || |||||    
T  8520089 tttcaaca 8520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 11590411 - 11590490
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||| ||| |||||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||    
T  11590411 ttattaggagaaacccgagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacct 11590490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 15013545 - 15013640
Alignment:
Q  218 gatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||  |||||||||  | |||||||||| || ||||| |||||||||| |||  ||||||||||| ||||||| || ||||||||| |||||    
T  15013545 gatagatatgactcttgagaacagtttataaagagaagacacttctcaccttacaagccggttttgtaaaaatgagttaggccccaaatttcaaca 15013640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 20429086 - 20428991
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgta 285  Q
    |||||| ||| | |||||||| |||||||||| || ||||||||||| | |||||||||| ||||  || ||||||||||   |||||||||||||    
T  20429086 tattggaaaacatccaagtcccacatcggatacataagactcttgataatagtttataaagaggaagcatttctcaccttatgaatcggttttgta 20428991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 29265910 - 29265969
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||  ||||| ||||||    
T  29265910 tattgggaaaaacccaagtcccacatcggatggataagactcttgagaagagtatataaa 29265969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 40664224 - 40664319
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||| |||||  |||||||||| |||||||||||| ||||| || | ||| |||| |||  |||||||||||| ||| || ||||||||||||    
T  40664224 acatcggttagataggactcttgataagagtttataaagaggaggcactcctcgccttacaagccggttttgtaaggatgtgttagaccccaaatt 40664319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 43423293 - 43423388
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||||||||| | ||||||||  |||||||||||| ||||| || | |||||||| |||  | |||||||||| |||||| || |||||||||    
T  43423293 acatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaatt 43423388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 21638337 - 21638255
Alignment:
Q  231 cttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||| |||||||||||| |||||||| | |||||||| |||   ||||||||||| |||||| || ||||||||| |||||    
T  21638337 cttgatcagagtttataaagaggagacactcctcaccttacaagatggttttgtaaggatgagttaggccccaaatttcaaca 21638255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 24382680 - 24382602
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||| |||||| |||||||| ||||||||||||| |||||||| |  ||||||||||||  |||| |||| |||||||    
T  24382680 tattgagaaaaaaccaagtcccacatcggatagataagactcttaaaaagagtttataaactggaggcaatactcacct 24382602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 29413136 - 29413198
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    |||||||| |||||||||| || |||| ||||| ||||||||||| |||||||||||| ||||    
T  29413136 ttgggaaagacccaagtcccacttcgggtagataagactcttgataagagtttataaagagga 29413198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 24131957 - 24131876
Alignment:
Q  226 agactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||||||  |||||||||||| ||||| |||| |||| ||| |||  | ||||| ||||||||||| ||||||||||||    
T  24131957 agactcttgagaagagtttataaagaggaggcaatcctcaacttacaagccagttttataagaatgagttagaccccaaatt 24131876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 39648827 - 39648872
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttga 235  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  39648827 tattgggaaaatcccaagtcccacatcggatagataagactcttga 39648872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 46098530 - 46098655
Alignment:
Q  251 aggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaa 349  Q
    ||||| |||| |||||| | |||  |||||||| ||| |||||| || |||||||||  |||| ||||| | | ||| |||||||||||| | |||||||    
T  46098530 aggaggcaatcctcaccatacaagccggttttgcaaggatgagttaggccccaaattttaacatggtatcaaagcttgtcgaatttaagggccgcctaaa 46098629  T
Q  350 cttattcacgcaccaaacctaaagag 375  Q
    | |||||||||||||| || ||||||    
T  46098630 cctattcacgcaccaagcccaaagag 46098655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 49828665 - 49828722
Alignment:
Q  192 ttgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||||||||| ||||| |||||||  |||||||||| ||| ||||||||    
T  49828665 ttgggaaaaacccaagtcccacatctgatagataggactcttgataagattttataaa 49828722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 11581746 - 11581826
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||| |||||| ||| ||| ||||||||||||| ||||||||||||| | | |||||| ||||| ||||  |||||||    
T  11581746 ttattggaaaaaactcaaatcccacatcggatagataagactcttgatgaaaatatataaagaggaggcaatcatcacctt 11581826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 20735763 - 20735851
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| ||||| ||||||| ||||||| ||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  20735763 agtcccacatcagatagataagactctcgagtagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 20735851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 28119854 - 28119750
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    |||| ||||||| |||||| ||||||  ||| ||| ||||||||||| |||||||||||| || || || ||||||||||   ||||  ||||||||| |    
T  28119854 tattaggaaaaatccaagttctacattagatggataagactcttgataagagtttataaagagtagccatttctcaccttatgaatctattttgtaagga 28119755  T
Q  290 tgagt 294  Q
    |||||    
T  28119754 tgagt 28119750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 42845133 - 42845069
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    |||| |||||||| ||||| | ||||| ||||||| ||||||||||| |||||||||||| ||||    
T  42845133 tattaggaaaaactcaagtaccacatcagatagataagactcttgataagagtttataaagagga 42845069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 45982174 - 45982238
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||||||||||||||||| || || ||||||| | ||||||||| | |||||||||| ||||    
T  45982174 tattgggaaaaacccaagtccaacgtcagatagataaaactcttgataaaagtttataaagagga 45982238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 47377827 - 47377909
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttg---atgagagtttataaaaaggagacaattctcacctt 269  Q
    ||||||||||||| || |||| ||||||||||||| |||||||||   || | |||||||| | |||||||||| ||||||||    
T  47377827 tattgggaaaaactcatgtcccacatcggatagataagactcttgataataatagtttatatagaggagacaatcctcacctt 47377909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 9381099 - 9381214
Alignment:
Q  198 aaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcag 297  Q
    |||||| || ||| ||||||||||||  ||||||||||  ||||| || ||| || || |||| |||||||| |||  ||| |||||||| |||||| ||    
T  9381099 aaaacctaaatcccacatcggatagacaagactcttgagaagagtataaaaagagaaggcaatcctcaccttacaagccggctttgtaaggatgagttag 9381198  T
Q  298 accccaaattacaaca 313  Q
     ||||||||| |||||    
T  9381199 gccccaaatttcaaca 9381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 15391747 - 15391818
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacct 268  Q
    ||||| |||||||| ||||||||||||| ||||||||||  | ||| |||||| ||||| |||| |||||||    
T  15391747 aaaaaaccaagtcccacatcggatagataagactcttgagaaaagtatataaagaggaggcaatcctcacct 15391818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 31305719 - 31305826
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaa 305  Q
    ||||| ||||| |||||||   ||||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || | |||||    
T  31305719 agtcccacatccgatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggctccaaa 31305818  T
Q  306 ttacaaca 313  Q
    || |||||    
T  31305819 tttcaaca 31305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 36332303 - 36332362
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||| ||||||| |||| ||||||||   ||||||||| ||||||||||||    
T  36332303 tattgggaaaaacgcaagtcccacattggatagatagaactcttgattagagtttataaa 36332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 47086389 - 47086310
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcacctt 269  Q
    |||||| ||||| ||| |||| ||||| ||||||| ||||||||||| |||||||||| | | |||||| | ||||||||    
T  47086389 tattggaaaaaatccatgtcccacatcagatagataagactcttgataagagtttatatacatgagacactcctcacctt 47086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 49895345 - 49895437
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgt 284  Q
    |||||| |||||| |||||| ||  || |||||||||||||||||||||  ||||||||||||||| || | ||||  |  ||||||||||||||    
T  49895345 tattggaaaaaactcaagtcata--tcagatagatgagactcttgatgatcgtttataaaaaggaggcactcctcatttcacaaatcggttttgt 49895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 313
Target Start/End: Original strand, 12233312 - 12233398
Alignment:
Q  227 gactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    |||||||||  |||||||||||| |||||  | | |||||||| |||  ||||||| |||| |||||| || |||||||||||||||    
T  12233312 gactcttgagaagagtttataaagaggaggtactcctcaccttacaagccggttttataaggatgagtaaggccccaaattacaaca 12233398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 22892533 - 22892495
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgaga 228  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  22892533 tattgggaaaaacccaagtcccacatcagatagatgaga 22892495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 27957898 - 27957804
Alignment:
Q  213 catcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||| |||||||| || ||||||  | |||||||||| |||||||  | |||||| | |||  |||||||||||| |||||| ||||||||||||    
T  27957898 catctgatagatgggattcttgagaaaagtttataaagaggagacgctcctcaccgtacaagccggttttgtaaggatgagttagaccccaaatt 27957804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 36331907 - 36331962
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaa 249  Q
    ||||||||||||||||||||| |||| |||||||    ||||||||| ||||||||||||    
T  36331907 tattgggaaaaacccaagtcccacattggataga----actcttgataagagtttataaa 36331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12314570 - 12314615
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttga 235  Q
    |||||||||||| |||||||| ||||||||||||  ||||||||||    
T  12314570 tattgggaaaaatccaagtcccacatcggatagacaagactcttga 12314615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 18374517 - 18374570
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtt 243  Q
    ||||| ||||||||||||||| |||| ||||||||  |||||| ||||||||||    
T  18374517 tattgagaaaaacccaagtcccacattggatagataggactctcgatgagagtt 18374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 20735552 - 20735637
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||  ||| |||||||| ||||| || | |||||||| |||  |||||||||||| |||||| || ||||||||| |||||    
T  20735552 actcttgagaagaatttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 22892501 - 22892428
Alignment:
Q  234 gatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||||||||| ||||| || | |||||||  |||  |||||||||||| |||||| || |||||||||    
T  22892501 gatgagagtttataaagaggaggcactcctcacctcacaatccggttttgtaaggatgagttaggccccaaatt 22892428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 33879852 - 33879767
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||  |||||||||||| ||||| || | |||||||| |||   ||||||||||| |||||| || ||||||||| |||||    
T  33879852 actcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 33879767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 313
Target Start/End: Original strand, 33964403 - 33964488
Alignment:
Q  228 actcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||||||  |||||||||||| ||||| || | |||||||| |||   ||||||||||| |||||| || ||||||||| |||||    
T  33964403 actcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 33964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 10017428 - 10017376
Alignment:
Q  202 cccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||| | ||||| ||||||| ||||||||||| |||||||||||| ||||    
T  10017428 cccaagtgccacatcagatagataagactcttgataagagtttataaagagga 10017376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 12314449 - 12314549
Alignment:
Q  276 cggttttgtaagaatgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaaga 374  Q
    |||||||||||| |||||| || |||  |||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| ||||||||||| || || |||||    
T  12314449 cggttttgtaaggatgagttaggccctgaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcactaagcccaaaga 12314548  T
Q  375 g 375  Q
    |    
T  12314549 g 12314549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 13357007 - 13356911
Alignment:
Q  212 acatcggatagatgagactcttgatgagagtttata-aaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    ||||||| |||||  ||| |||||| |||||||||| |||||||| || | || ||||| |||  |||||||||| |||||||| |||||| |||||    
T  13357007 acatcggttagatatgacgcttgataagagtttataaaaaaggaggcactcctaaccttacaagccggttttgtaggaatgagttagaccctaaatt 13356911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 19937139 - 19937051
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||   | ||||||  |||||||||||| ||||| || | |||||||| |||  |||||||||||| ||||||    
T  19937139 agtcccacatcggatagatagaattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 19937051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 20429347 - 20429283
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaagga 254  Q
    ||||||| ||| || |||||| | ||||||| ||| ||||||||||| |||||||||||| ||||    
T  20429347 tattgggtaaagcctaagtcccagatcggatggataagactcttgataagagtttataaagagga 20429283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 35024322 - 35024242
Alignment:
Q  227 gactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||||||| |||||||||||| ||||| || | |||||||| ||   |||||||||||| ||| || || |||||||||    
T  35024322 gactcttgataagagtttataaacaggaggcactcctcaccttacaggccggttttgtaaggatgggttaggccccaaatt 35024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 45858663 - 45858751
Alignment:
Q  206 agtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagt 294  Q
    ||||| |||||||||||||  || ||||||  |||||||||||| ||||| || | |||||| | ||| |||||||| |||| ||||||    
T  45858663 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagtcggttttataaggatgagt 45858751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 13298 - 13484
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||| || |||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||| || |    
T  13298 tattgggaaaaactcaggtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgagga 13397  T
Q  290 tgagtcagaccccaaattacaaca-ggtattagaacttatcgaatttaaggactgcctaaacttattcacgcaccaaacctaaagag 375  Q
    ||||| || |||| |||| ||||| ||||| ||| ||| ||||||| |||| | |||||||| |||||||||||||| || ||||||    
T  13398 tgagttaggccccgaatttcaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag 13484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 13505 - 13628
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||||||||||||||||| | ||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| |||  ||||||||  || |    
T  13505 tattgggaaaaacccaagtcccaaatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgcgagga 13604  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| || |||| |||| |||||    
T  13605 tgagttaggccccgaatttcaaca 13628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 76851 - 76967
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||| |||  |||||||||||  |||||| |    
T  76851 aaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagtta 76950  T
Q  297 gaccccaaattacaaca 313  Q
    | |||||||||||||||    
T  76951 ggccccaaattacaaca 76967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 3058 - 2936
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaat 290  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| ||||| || |||   ||||||||||| ||    
T  3058 attgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggat 2959  T
Q  291 gagtcagaccccaaattacaaca 313  Q
    |||| || ||||||||| |||||    
T  2958 gagttaggccccaaatttcaaca 2936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 21376 - 21252
Alignment:
Q  190 tattgggaaaa-acccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaaga 288  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||| |||||||| ||| | |||||||||||     
T  21376 tattgggaaaatacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagttggttttgtaagg 21277  T
Q  289 atgagtcagaccccaaattacaaca 313  Q
    |||||| || || |||||| |||||    
T  21276 atgagttaggcctcaaatttcaaca 21252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 11392 - 11338
Alignment:
Q  253 gagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaatt 307  Q
    |||||| | |||||||| ||| |||||||||||||||||||| |||||| |||||    
T  11392 gagacactcctcaccttacaagtcggttttgtaagaatgagttagaccctaaatt 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 1978 - 1862
Alignment:
Q  197 aaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtca 296  Q
    |||||||||||||  ||||||||||||| ||||||||||| ||||||||||   ||||| || |  ||||||| |||  |||||||||||| |||||| |    
T  1978 aaaaacccaagtctcacatcggatagataagactcttgataagagtttataccgaggaggcactcttcaccttacaagccggttttgtaagcatgagtta 1879  T
Q  297 gaccccaaattacaaca 313  Q
    |||| |||||| |||||    
T  1878 gacctcaaatttcaaca 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 13744 - 13621
Alignment:
Q  190 tattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaa 289  Q
    ||||||| ||||| ||||||  ||||||||||||||||||||||||  ||||  |||||| | ||| |||| |||||||| |||  ||||||||||||      
T  13744 tattggggaaaactcaagtcacacatcggatagatgagactcttgagaagagaatataaagacgaggcaatcctcaccttacaagccggttttgtaaggt 13645  T
Q  290 tgagtcagaccccaaattacaaca 313  Q
    ||||| ||||||| |||| |||||    
T  13644 tgagttagacccccaatttcaaca 13621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 59518 - 59579
Alignment:
Q  191 attgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggag 255  Q
    |||||||||||||||||||| |||||||||||||   ||||||||  ||||| |||||| |||||    
T  59518 attgggaaaaacccaagtcccacatcggatagat---actcttgagaagagtatataaagaggag 59579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 4303 - 4228
Alignment:
Q  238 agagtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagaccccaaattacaaca 313  Q
    ||||| |||||| |||||  ||| |||||||| |||  |||||||||||| |||||| ||||||||||||||||||    
T  4303 agagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttagaccccaaattacaaca 4228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 15765 - 15696
Alignment:
Q  189 ttattgggaaaaacccaagtcctacatcggatagatgagactcttgatgagagtttataaaaaggagaca 258  Q
    |||| ||||||||||||||| | |||||  |||||| ||| | ||||| |||||||||||| ||||||||    
T  15765 ttatcgggaaaaacccaagtaccacatcaaatagataagatttttgataagagtttataaataggagaca 15696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 34567 - 34507
Alignment:
Q  240 agtttataaaaaggagacaattctcaccttgcaaatcggttttgtaagaatgagtcagacc 300  Q
    |||||||||| |||||||| | |||||| | |||  ||||||||||||||||||| |||||    
T  34567 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 34507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University