View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2876_low_1 (Length: 1413)

Name: NF2876_low_1
Description: NF2876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2876_low_1
NF2876_low_1
[»] chr3 (57 HSPs)
chr3 (620-1397)||(46770016-46770793)
chr3 (18-587)||(46769402-46769982)
chr3 (946-1050)||(46762478-46762582)
chr3 (1118-1192)||(27418768-27418840)
chr3 (1118-1192)||(34673348-34673422)
chr3 (1118-1165)||(36227873-36227920)
chr3 (1086-1192)||(46969902-46970008)
chr3 (1118-1178)||(6125852-6125913)
chr3 (1097-1145)||(27027333-27027381)
chr3 (1118-1205)||(39328494-39328581)
chr3 (1086-1145)||(3283385-3283444)
chr3 (1118-1192)||(8674618-8674692)
chr3 (1118-1192)||(52089124-52089199)
chr3 (1118-1192)||(54253799-54253873)
chr3 (1099-1145)||(42092808-42092854)
chr3 (1099-1145)||(50090943-50090989)
chr3 (1099-1145)||(54160389-54160435)
chr3 (1096-1145)||(8674534-8674583)
chr3 (1088-1145)||(39328402-39328459)
chr3 (1101-1145)||(34673581-34673625)
chr3 (1118-1192)||(3283276-3283350)
chr3 (1118-1192)||(41355495-41355569)
chr3 (1118-1192)||(52945651-52945725)
chr3 (1099-1145)||(6125771-6125817)
chr3 (1099-1145)||(21395974-21396020)
chr3 (1099-1145)||(36418714-36418760)
chr3 (1118-1190)||(35280490-35280562)
chr3 (1118-1190)||(38101195-38101267)
chr3 (273-341)||(46774086-46774154)
chr3 (1085-1145)||(54253908-54253968)
chr3 (1118-1201)||(54411787-54411870)
chr3 (1118-1192)||(4126055-4126129)
chr3 (1086-1145)||(5232730-5232789)
chr3 (1118-1192)||(11238748-11238822)
chr3 (1118-1192)||(13700254-13700328)
chr3 (1086-1145)||(45408234-45408293)
chr3 (1118-1192)||(45408328-45408402)
chr3 (1118-1192)||(50090834-50090908)
chr3 (1118-1203)||(54160470-54160553)
chr3 (1086-1141)||(54411909-54411963)
chr3 (1099-1145)||(37702683-37702729)
chr3 (1335-1377)||(46762865-46762907)
chr3 (1118-1192)||(19855546-19855617)
chr3 (1118-1189)||(37702577-37702648)
chr3 (1106-1145)||(8351060-8351099)
chr3 (1118-1192)||(20513035-20513109)
chr3 (1123-1154)||(26103748-26103779)
chr3 (1118-1192)||(27037987-27038061)
chr3 (1249-1324)||(46762702-46762777)
chr3 (1118-1192)||(51614613-51614687)
chr3 (1123-1190)||(53581551-53581618)
chr3 (1099-1145)||(19855465-19855511)
chr3 (1099-1145)||(35711941-35711987)
chr3 (1118-1190)||(36418795-36418867)
chr3 (1123-1156)||(50801600-50801633)
chr3 (1123-1156)||(50874247-50874280)
chr3 (1123-1156)||(53467484-53467517)
[»] chr7 (67 HSPs)
chr7 (1118-1192)||(27131078-27131152)
chr7 (1099-1192)||(32392237-32392331)
chr7 (1086-1192)||(7596879-7596984)
chr7 (1118-1192)||(48709035-48709109)
chr7 (1118-1189)||(20568340-20568411)
chr7 (1100-1192)||(28333763-28333855)
chr7 (1118-1201)||(3875220-3875302)
chr7 (1118-1192)||(21993551-21993625)
chr7 (1086-1145)||(27130984-27131043)
chr7 (1118-1192)||(41378371-41378445)
chr7 (1120-1190)||(8953290-8953360)
chr7 (1086-1145)||(5995162-5995221)
chr7 (1118-1192)||(26927965-26928039)
chr7 (1118-1192)||(41585879-41585953)
chr7 (1118-1176)||(24251910-24251968)
chr7 (1118-1192)||(27946823-27946897)
chr7 (1118-1192)||(38368241-38368315)
chr7 (1118-1179)||(42373471-42373532)
chr7 (1097-1145)||(27946932-27946980)
chr7 (1099-1154)||(48624983-48625039)
chr7 (1118-1192)||(5995052-5995127)
chr7 (1118-1192)||(35221665-35221739)
chr7 (1118-1192)||(35983188-35983262)
chr7 (1118-1192)||(36004600-36004674)
chr7 (1118-1192)||(41037206-41037280)
chr7 (1118-1192)||(48227231-48227305)
chr7 (1099-1145)||(3203400-3203446)
chr7 (1100-1150)||(20417976-20418026)
chr7 (1124-1188)||(9522470-9522534)
chr7 (1100-1192)||(20009181-20009273)
chr7 (1100-1145)||(21993471-21993516)
chr7 (1099-1144)||(31953159-31953204)
chr7 (1118-1190)||(3407148-3407220)
chr7 (1097-1145)||(35221779-35221827)
chr7 (1099-1143)||(43077604-43077648)
chr7 (1118-1192)||(3203287-3203365)
chr7 (1084-1145)||(3961165-3961223)
chr7 (1118-1201)||(12362823-12362906)
chr7 (1086-1145)||(14313939-14313998)
chr7 (1086-1145)||(20568246-20568304)
chr7 (1118-1192)||(24611497-24611571)
chr7 (1086-1140)||(31853805-31853857)
chr7 (1118-1192)||(31953240-31953314)
chr7 (1086-1145)||(35983094-35983153)
chr7 (1086-1145)||(36004506-36004565)
chr7 (1086-1145)||(45099958-45100017)
chr7 (1118-1192)||(45100052-45100126)
chr7 (1121-1190)||(3350016-3350085)
chr7 (1086-1144)||(9522573-9522630)
chr7 (1146-1192)||(31853769-31853815)
chr7 (1099-1145)||(42373567-42373613)
chr7 (1099-1144)||(46003843-46003888)
chr7 (1097-1145)||(12362941-12362989)
chr7 (1118-1192)||(3961258-3961332)
chr7 (1118-1192)||(14656535-14656609)
chr7 (1123-1190)||(15957340-15957407)
chr7 (1123-1190)||(27168379-27168446)
chr7 (1124-1190)||(938898-938964)
chr7 (1099-1145)||(3875109-3875155)
chr7 (1103-1141)||(38368164-38368202)
chr7 (1099-1145)||(41378480-41378526)
chr7 (1099-1141)||(48227344-48227386)
chr7 (1123-1156)||(2509446-2509479)
chr7 (1123-1156)||(2936677-2936710)
chr7 (1123-1156)||(11766158-11766191)
chr7 (1096-1145)||(28059334-28059382)
chr7 (1123-1156)||(28912119-28912152)
[»] scaffold0112 (2 HSPs)
scaffold0112 (1086-1194)||(24582-24690)
scaffold0112 (1098-1190)||(35902-35994)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1099-1178)||(88185-88264)
scaffold0003 (1118-1190)||(103249-103321)
scaffold0003 (1102-1145)||(103356-103399)
[»] chr2 (48 HSPs)
chr2 (1102-1192)||(27175470-27175560)
chr2 (1099-1192)||(10862577-10862670)
chr2 (1118-1192)||(34125546-34125620)
chr2 (1118-1190)||(5601711-5601783)
chr2 (1086-1156)||(6231208-6231279)
chr2 (1086-1192)||(29511835-29511942)
chr2 (1086-1192)||(34450304-34450409)
chr2 (1118-1192)||(4206514-4206588)
chr2 (1118-1192)||(25880661-25880735)
chr2 (1082-1145)||(4206413-4206476)
chr2 (1086-1145)||(18924646-18924705)
chr2 (1086-1192)||(27097021-27097127)
chr2 (1086-1192)||(36779802-36779910)
chr2 (1123-1192)||(39961536-39961605)
chr2 (1118-1192)||(9548208-9548282)
chr2 (1118-1192)||(29471632-29471706)
chr2 (1118-1192)||(12895410-12895484)
chr2 (1086-1192)||(14747356-14747462)
chr2 (1118-1192)||(24314296-24314370)
chr2 (1086-1145)||(29471741-29471800)
chr2 (1086-1145)||(33740222-33740281)
chr2 (1118-1201)||(21950721-21950804)
chr2 (1086-1145)||(9548317-9548376)
chr2 (1118-1192)||(10664689-10664763)
chr2 (1086-1145)||(10664798-10664857)
chr2 (1118-1192)||(12725715-12725789)
chr2 (1118-1192)||(18924537-18924611)
chr2 (1086-1145)||(25810512-25810570)
chr2 (1099-1145)||(16719834-16719880)
chr2 (1086-1148)||(33471418-33471480)
chr2 (1118-1190)||(5534289-5534361)
chr2 (1118-1190)||(39089103-39089175)
chr2 (1118-1201)||(42090496-42090579)
chr2 (1098-1145)||(12725824-12725871)
chr2 (1096-1143)||(39435040-39435087)
chr2 (1090-1145)||(42090406-42090461)
chr2 (1099-1145)||(1750025-1750071)
chr2 (1099-1145)||(25880576-25880622)
chr2 (1118-1190)||(44539843-44539915)
chr2 (1097-1145)||(39961645-39961693)
chr2 (1123-1190)||(11675278-11675345)
chr2 (1086-1145)||(24314202-24314261)
chr2 (1123-1190)||(34082692-34082759)
chr2 (1086-1145)||(39089210-39089269)
chr2 (1118-1179)||(1749929-1749990)
chr2 (1118-1162)||(2969675-2969720)
chr2 (1123-1156)||(29512111-29512144)
chr2 (1100-1145)||(44539951-44539996)
[»] chr5 (50 HSPs)
chr5 (1099-1192)||(23129600-23129693)
chr5 (1118-1190)||(27365797-27365869)
chr5 (1086-1192)||(19863111-19863217)
chr5 (1119-1192)||(19995358-19995431)
chr5 (1118-1190)||(13960382-13960455)
chr5 (1118-1190)||(16490924-16490996)
chr5 (1118-1181)||(5497757-5497820)
chr5 (1118-1192)||(17689342-17689416)
chr5 (1099-1145)||(16273677-16273723)
chr5 (1099-1145)||(21913858-21913904)
chr5 (1118-1201)||(18015724-18015807)
chr5 (1086-1192)||(16490721-16490826)
chr5 (1086-1145)||(19323812-19323871)
chr5 (1118-1192)||(23204458-23204532)
chr5 (1094-1145)||(27365711-27365762)
chr5 (1128-1192)||(25593283-25593347)
chr5 (1118-1192)||(9741807-9741881)
chr5 (1086-1145)||(20269221-20269280)
chr5 (1086-1145)||(23204364-23204423)
chr5 (1086-1145)||(28038316-28038375)
chr5 (1118-1192)||(28813061-28813135)
chr5 (1086-1145)||(37172504-37172563)
chr5 (1086-1144)||(31056485-31056543)
chr5 (1099-1145)||(38758732-38758778)
chr5 (1086-1150)||(15388217-15388281)
chr5 (1118-1201)||(38293472-38293555)
chr5 (1086-1145)||(18015631-18015689)
chr5 (1118-1192)||(19323703-19323777)
chr5 (1106-1145)||(31042635-31042674)
chr5 (1086-1145)||(33429254-33429313)
chr5 (1118-1192)||(37172395-37172469)
chr5 (1118-1192)||(38758624-38758698)
chr5 (1099-1145)||(13960489-13960535)
chr5 (1118-1164)||(31042554-31042600)
chr5 (1118-1164)||(31056403-31056449)
chr5 (1123-1190)||(2695223-2695290)
chr5 (1118-1165)||(19858480-19858527)
chr5 (1099-1145)||(9741726-9741772)
chr5 (1124-1190)||(14369754-14369820)
chr5 (1099-1145)||(16994251-16994297)
chr5 (1118-1177)||(19325055-19325115)
chr5 (1118-1190)||(26730310-26730381)
chr5 (1132-1162)||(37468700-37468730)
chr5 (1123-1156)||(17421715-17421748)
chr5 (1123-1156)||(22701871-22701904)
chr5 (1123-1156)||(25912170-25912203)
chr5 (1123-1156)||(31240372-31240405)
chr5 (1123-1156)||(31752137-31752170)
chr5 (1123-1156)||(33832737-33832770)
chr5 (1123-1156)||(39548968-39549001)
[»] chr8 (60 HSPs)
chr8 (1086-1192)||(3210868-3210974)
chr8 (1118-1192)||(12176207-12176281)
chr8 (1118-1192)||(12420635-12420709)
chr8 (1086-1192)||(16645481-16645587)
chr8 (1118-1201)||(42806293-42806376)
chr8 (1118-1190)||(1271025-1271097)
chr8 (1086-1145)||(10078292-10078351)
chr8 (1099-1156)||(39589974-39590032)
chr8 (1118-1167)||(40301373-40301422)
chr8 (1086-1145)||(1271136-1271195)
chr8 (1098-1145)||(16784330-16784377)
chr8 (1118-1192)||(16930805-16930879)
chr8 (1118-1192)||(19922592-19922666)
chr8 (1118-1192)||(23472595-23472669)
chr8 (1086-1145)||(30774113-30774172)
chr8 (1086-1145)||(42806197-42806256)
chr8 (1118-1191)||(22812324-22812397)
chr8 (1099-1145)||(38498360-38498406)
chr8 (1118-1190)||(26912325-26912397)
chr8 (1118-1190)||(33568071-33568143)
chr8 (1118-1201)||(9478793-9478876)
chr8 (1101-1145)||(14371614-14371658)
chr8 (1086-1145)||(9479402-9479461)
chr8 (1118-1180)||(12295179-12295241)
chr8 (1090-1145)||(44873904-44873959)
chr8 (1099-1145)||(12176316-12176362)
chr8 (1099-1145)||(12420744-12420790)
chr8 (1118-1178)||(38498265-38498325)
chr8 (1099-1139)||(23472515-23472555)
chr8 (1118-1192)||(253951-254025)
chr8 (1118-1192)||(661833-661907)
chr8 (1118-1192)||(10078386-10078457)
chr8 (1123-1190)||(27545888-27545955)
chr8 (1118-1192)||(28539245-28539319)
chr8 (1099-1150)||(38071134-38071185)
chr8 (1106-1145)||(39077393-39077432)
chr8 (1099-1145)||(16930914-16930960)
chr8 (1100-1145)||(12295276-12295321)
chr8 (1100-1145)||(13327039-13327084)
chr8 (1118-1201)||(41624643-41624726)
chr8 (1098-1145)||(5224299-5224346)
chr8 (1118-1165)||(13326958-13327005)
chr8 (1086-1145)||(26912432-26912491)
chr8 (1123-1190)||(29125711-29125778)
chr8 (1118-1156)||(39077319-39077358)
chr8 (1098-1145)||(40067662-40067709)
chr8 (1098-1145)||(44473747-44473794)
chr8 (1127-1192)||(847640-847705)
chr8 (1118-1179)||(5224381-5224441)
chr8 (1132-1178)||(14819297-14819343)
chr8 (1124-1190)||(26042942-26043008)
chr8 (1088-1145)||(1983588-1983645)
chr8 (1123-1156)||(13269269-13269302)
chr8 (1123-1156)||(13290624-13290657)
chr8 (1118-1174)||(14041412-14041468)
chr8 (1123-1156)||(25127999-25128032)
chr8 (1118-1190)||(28969103-28969175)
chr8 (1123-1156)||(30633100-30633133)
chr8 (1118-1190)||(38092183-38092255)
chr8 (1118-1190)||(40067555-40067627)
[»] chr4 (61 HSPs)
chr4 (1118-1192)||(43837694-43837768)
chr4 (1118-1201)||(47960290-47960373)
chr4 (1118-1192)||(53773689-53773764)
chr4 (1118-1166)||(26889493-26889541)
chr4 (1121-1192)||(34041196-34041267)
chr4 (1118-1201)||(42434224-42434307)
chr4 (1086-1192)||(7645886-7645991)
chr4 (1118-1192)||(34728224-34728298)
chr4 (1086-1192)||(42560130-42560235)
chr4 (1118-1194)||(19329441-19329517)
chr4 (1084-1145)||(20835692-20835753)
chr4 (1118-1192)||(11020352-11020426)
chr4 (1118-1192)||(27907071-27907145)
chr4 (1118-1192)||(32626066-32626140)
chr4 (1118-1192)||(32868066-32868140)
chr4 (1086-1141)||(33117501-33117556)
chr4 (1118-1192)||(51682563-51682637)
chr4 (1118-1192)||(51702538-51702612)
chr4 (1099-1146)||(54158117-54158164)
chr4 (1120-1190)||(7603629-7603699)
chr4 (1099-1145)||(34728333-34728379)
chr4 (1086-1145)||(5975643-5975702)
chr4 (1118-1192)||(6137341-6137415)
chr4 (1118-1188)||(6944568-6944638)
chr4 (1086-1145)||(32090076-32090135)
chr4 (1086-1145)||(38427182-38427241)
chr4 (1118-1192)||(40875293-40875367)
chr4 (1118-1192)||(52344575-52344650)
chr4 (1118-1192)||(849241-849315)
chr4 (1099-1145)||(6137260-6137306)
chr4 (1099-1145)||(43837803-43837849)
chr4 (1099-1145)||(48860836-48860882)
chr4 (1118-1190)||(20503514-20503586)
chr4 (1100-1145)||(38963355-38963400)
chr4 (1118-1201)||(32089958-32090041)
chr4 (1118-1192)||(13387065-13387139)
chr4 (1118-1192)||(20835788-20835862)
chr4 (1118-1192)||(28589241-28589315)
chr4 (1097-1144)||(34041306-34041353)
chr4 (1118-1180)||(38427085-38427147)
chr4 (1118-1192)||(40479928-40480002)
chr4 (1106-1145)||(47960408-47960447)
chr4 (1086-1145)||(51682672-51682731)
chr4 (1099-1145)||(13386984-13387030)
chr4 (1099-1145)||(22254223-22254269)
chr4 (1099-1145)||(51702457-51702503)
chr4 (1118-1182)||(16467171-16467235)
chr4 (1109-1145)||(32626175-32626211)
chr4 (1118-1156)||(5975737-5975776)
chr4 (1118-1192)||(13372453-13372527)
chr4 (1118-1192)||(13382654-13382728)
chr4 (1123-1190)||(26335745-26335812)
chr4 (1123-1190)||(52437566-52437633)
chr4 (1099-1145)||(11020461-11020507)
chr4 (1132-1178)||(17181135-17181181)
chr4 (1099-1141)||(20503433-20503475)
chr4 (1099-1145)||(42434342-42434388)
chr4 (1118-1156)||(50677980-50678018)
chr4 (1086-1140)||(53773645-53773699)
chr4 (1123-1156)||(4712695-4712728)
chr4 (1086-1142)||(13388006-13388060)
[»] chr1 (61 HSPs)
chr1 (1100-1192)||(2752657-2752749)
chr1 (1086-1192)||(1469696-1469802)
chr1 (1118-1192)||(17168237-17168311)
chr1 (1086-1201)||(26284499-26284613)
chr1 (1086-1145)||(9005416-9005475)
chr1 (1118-1190)||(8549565-8549637)
chr1 (1124-1192)||(38509645-38509713)
chr1 (1118-1192)||(1627676-1627750)
chr1 (1118-1192)||(24992866-24992940)
chr1 (1086-1192)||(26842799-26842904)
chr1 (1118-1192)||(43939453-43939527)
chr1 (1118-1192)||(49660369-49660443)
chr1 (1118-1192)||(1838661-1838736)
chr1 (1086-1145)||(2964972-2965030)
chr1 (1094-1145)||(9679712-9679763)
chr1 (1099-1145)||(25825408-25825454)
chr1 (1099-1145)||(44720066-44720112)
chr1 (1100-1145)||(14463321-14463366)
chr1 (1139-1192)||(48875107-48875159)
chr1 (1084-1192)||(22675114-22675221)
chr1 (1097-1145)||(26213809-26213857)
chr1 (1098-1145)||(1627784-1627831)
chr1 (1086-1145)||(1838771-1838830)
chr1 (1118-1192)||(2964863-2964937)
chr1 (1127-1201)||(9005517-9005591)
chr1 (1118-1192)||(25825299-25825373)
chr1 (1118-1192)||(30414103-30414177)
chr1 (1118-1192)||(42470582-42470656)
chr1 (1099-1145)||(1406710-1406756)
chr1 (1120-1201)||(4105587-4105668)
chr1 (1118-1187)||(10769775-10769844)
chr1 (1099-1145)||(30414212-30414258)
chr1 (1100-1145)||(17168157-17168202)
chr1 (1100-1145)||(30819623-30819668)
chr1 (1100-1145)||(40460983-40461028)
chr1 (1118-1161)||(47921642-47921686)
chr1 (1123-1190)||(158541-158608)
chr1 (1123-1190)||(463439-463506)
chr1 (1118-1156)||(7336094-7336133)
chr1 (1123-1190)||(13157686-13157753)
chr1 (1086-1141)||(17453010-17453065)
chr1 (1098-1145)||(25671087-25671134)
chr1 (1123-1190)||(27787927-27787994)
chr1 (1123-1190)||(33675823-33675890)
chr1 (1122-1156)||(24770755-24770789)
chr1 (1118-1191)||(26897335-26897407)
chr1 (1124-1190)||(34515258-34515324)
chr1 (1132-1174)||(36630440-36630482)
chr1 (1099-1145)||(38509730-38509776)
chr1 (1122-1156)||(41146286-41146320)
chr1 (1099-1145)||(49659892-49659938)
chr1 (1122-1156)||(50559375-50559409)
chr1 (1100-1145)||(5226801-5226846)
chr1 (1123-1156)||(5491728-5491761)
chr1 (1099-1140)||(7336173-7336214)
chr1 (1123-1156)||(13264567-13264600)
chr1 (1123-1156)||(16005600-16005633)
chr1 (1123-1156)||(26843124-26843157)
chr1 (1123-1156)||(42199889-42199922)
chr1 (1123-1156)||(42208757-42208790)
chr1 (1100-1145)||(47921562-47921607)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1086-1192)||(8529-8634)
[»] chr6 (23 HSPs)
chr6 (1086-1192)||(19143617-19143721)
chr6 (1105-1190)||(22423901-22423986)
chr6 (1118-1192)||(12159449-12159523)
chr6 (1119-1192)||(15081203-15081276)
chr6 (1123-1190)||(29427237-29427304)
chr6 (1118-1192)||(6322571-6322645)
chr6 (1099-1192)||(28295551-28295647)
chr6 (1099-1192)||(28516426-28516522)
chr6 (1101-1145)||(17347156-17347200)
chr6 (1118-1192)||(10075074-10075148)
chr6 (1086-1145)||(12159558-12159623)
chr6 (1118-1192)||(14975407-14975480)
chr6 (1099-1145)||(18096331-18096377)
chr6 (1100-1145)||(10074994-10075039)
chr6 (1118-1190)||(17347049-17347121)
chr6 (1140-1192)||(18096429-18096480)
chr6 (1140-1192)||(18102549-18102600)
chr6 (1118-1188)||(9533450-9533519)
chr6 (1132-1162)||(9406756-9406786)
chr6 (1099-1145)||(9891373-9891419)
chr6 (1123-1156)||(14488331-14488364)
chr6 (1086-1143)||(30416495-30416552)
chr6 (1123-1156)||(33730554-33730587)
[»] scaffold0168 (2 HSPs)
scaffold0168 (1118-1189)||(35135-35206)
scaffold0168 (1099-1145)||(35054-35100)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1118-1192)||(94810-94884)
scaffold0002 (1100-1141)||(95051-95092)
scaffold0002 (1104-1145)||(478315-478356)
[»] scaffold0093 (2 HSPs)
scaffold0093 (1118-1192)||(9232-9306)
scaffold0093 (1102-1145)||(9155-9198)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1099-1145)||(392406-392452)
scaffold0001 (1119-1192)||(392488-392561)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1099-1190)||(74985-75076)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1118-1192)||(17867-17941)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1096-1145)||(49818-49867)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1101-1145)||(77027-77071)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1123-1190)||(9860-9927)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1086-1145)||(231239-231297)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1123-1156)||(6575-6608)


Alignment Details
Target: chr3 (Bit Score: 702; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 702; E-Value: 0
Query Start/End: Original strand, 620 - 1397
Target Start/End: Original strand, 46770016 - 46770793
Alignment:
Q  620 tatgcctacgatcaataagaattgaatcaaaatatgacacatcatcttgaggattgtgaaaatcatccacctttcttcgctatccggctcaaaatcaata 719  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46770016 tatgcctacaattaataagaattgaatcaaaatatgacacatcatcttgaggattgtgaaaatcatccacctttctttgctatccggctcaaaatcaata 46770115  T
Q  720 tcacaactcttgctagccgataacaattagatttaaaggctctaaccattcaatttttgcaaaaacgaaacatcattgttcatctcgcagacatccccaa 819  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||     
T  46770116 tcacaactcttgctagccgataacaattagatttaaaggctctaaccattcaattttagcaaaaacgaaacatcattgttcatctcgcagacatcctcag 46770215  T
Q  820 taccaacacaattatttcttatggaaaaagaggcatcaacgttgcattttagccgcaaccataggattagtccatttatcactaggagtagccacagcac 919  Q
    |||||||||||||||| ||   | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  46770216 taccaacacaattattcctcgggaagaaagaggcatcaacgttgcattttagccgcaaccataggattagtccacttatcactaggagtagccacaacac 46770315  T
Q  920 gcggcttcaatatgactagctaaatgtcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaa 1019  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770316 gtagcttcaatatgactagctaaatgtcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaa 46770415  T
Q  1020 attagtaatttgttttcaatatcaacaatgtaccataaaattagtaatttgttttcatatttattttatatatatgtgagttttgctagaagacaccctt 1119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770416 attagtaatttgttttcaatatcaacaatgtaccataaaattagtaatttgttttcatatttattttatatatatgtgagttttgctagaagacaccctt 46770515  T
Q  1120 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattgatattaattgcaggac 1219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  46770516 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagactttcattggtattaattgcaggac 46770615  T
Q  1220 ggaaaagttttacaagagggtcctgtttcccctctttataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttct 1319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770616 ggaaaagttttacaagagggtcctgtttcccctctctataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttct 46770715  T
Q  1320 tctatcttgagatgctttcttataggattcattggccgtttaattgatgtatcagtgaggtttgatactctaaggatt 1397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770716 tctatcttgagatgctttcttataggattcattggccgtttaattgatgtatcagtgaggtttgatactctaaggatt 46770793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 18 - 587
Target Start/End: Original strand, 46769402 - 46769982
Alignment:
Q  18 tgttgtgcgttgagtcnnnnnnnagttcaatcttgttgtgcgttgagtattttatttttgtatattagtagcatgttgtttaagcataaacgatgctgtc 117  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46769402 tgttgtgcgttgagtctttttttagttcaatcttgttgtgcgttgagtattttatttttgtatattagtagtatgttgtttaagcataaacgatgctgtc 46769501  T
Q  118 tttatttattctctttgcaagttggacatgcataacacctatagcaactaattatnnnnnnn--------tatacgtgcttatctttcatctactttagg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||||    
T  46769502 tttatttattctctttgcaagttggacatgcataacacctatagcaactaattaattataaaaaaaaaaatatacgtgcttatctttcatctactttagg 46769601  T
Q  210 atcaagaattaatctgaaatttatcaacaa---taatcaagaatctggactataagctatatgatcgatctatctccaatcggcaggtgttggaaaaaga 306  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46769602 atcaagaattaatctgaaatttatcaacaacaataatcaagaatctggactataagctatatgatcgatctatctccaatcggcaggtgttggaaaaaga 46769701  T
Q  307 tgagaagtgttgttcaatttaaaggcgtgttgttaaattacttaataagtatgat----tgtaatatcctctnnnnnnnngactaattaaaatatataaa 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||        ||||||    ||||||||||    
T  46769702 tgagaagtgttgttcaatttaaaggcgtgttgttaaattacttaataagtatgatatattataatatcctctaaaaaaaagactaa----aatatataaa 46769797  T
Q  403 agcatggcctaagtacaactaaatcattccatcagtaataaacgatttaataaagaatcaacattaattaataagcagaatgaatctagttggagatgta 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46769798 agcatggcctaagtacaactaaatcattccatcagtaataaacgatttaataaagaatcaacattaattaataagcagaatgaatctagttggagatgta 46769897  T
Q  503 ggtgtcacttaagctaaggcatgaacaacttaaaactctattagtttgtcttctaataaactcaatcttagagcttttgaagaag 587  Q
    |  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  46769898 gtagtcacttaagctaaggcatgaacaacttaaaactctattaatttgtcttctaataaactcaatcttggagcttttgaagaag 46769982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 946 - 1050
Target Start/End: Original strand, 46762478 - 46762582
Alignment:
Q  946 tcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaaattagtaatttgttttcaatatcaac 1045  Q
    |||||||||||||||||||| | || ||| ||||||||| ||||||||| ||||||||| |||||||  |||||||  | ||| ||||||||||||||||    
T  46762478 tcagtgctcgttcaatttctcaagcctatattacacgacaattcctactgaatcttaaacaggtgatgcataaaatgcgcaatctgttttcaatatcaac 46762577  T
Q  1046 aatgt 1050  Q
    |||||    
T  46762578 aatgt 46762582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 27418840 - 27418768
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||  |||||||||||    
T  27418840 tttatgaaggtgtcttttagcaagttataactaaaaagtagataattac--cttgaggtgtgagttgctaaaaga 27418768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 34673422 - 34673348
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  34673422 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 34673348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1165
Target Start/End: Original strand, 36227873 - 36227920
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36227873 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 36227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 46970008 - 46969902
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| |  |||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| || ||||| | ||||| |||||| |||    
T  46970008 tatatatatatatgttttgctagaagacacattttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcataccttgatgtgtgggttg 46969910  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  46969909 ctaaaaga 46969902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1118 - 1178
Target Start/End: Original strand, 6125852 - 6125913
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataact-aaaaagttgataatcacaacttgaggtgt 1178  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  6125852 tttatgaaggtgtcttttagcaagttataactaaaaaagtggataatcacaccttgaggtgt 6125913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 27027381 - 27027333
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27027381 gagttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 27027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1118 - 1205
Target Start/End: Original strand, 39328494 - 39328581
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattgat 1205  Q
    |||||||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||| ||||||| |  |||||||||    
T  39328494 tttatgaaagtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgttaaaagacaccttcattgat 39328581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 3283444 - 3283385
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||    
T  3283444 tatatatatatgggttttgctagaagacacattttatgaaggtgtcttttagcaagttat 3283385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 8674618 - 8674692
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||| || ||||||||||||    
T  8674618 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtatgaattgctaaaaga 8674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 52089124 - 52089199
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||  || |||||| ||||| |||||||||||    
T  52089124 tttatgaaggtgtcttttagcaagtttataactaaaaagtggataatatcaccttgagatgtgggttgctaaaaga 52089199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 54253873 - 54253799
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  54253873 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 54253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 42092808 - 42092854
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  42092808 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 42092854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 50090989 - 50090943
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  50090989 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 50090943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 54160389 - 54160435
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  54160389 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 54160435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1096 - 1145
Target Start/End: Original strand, 8674534 - 8674583
Alignment:
Q  1096 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8674534 tgagttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 8674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1088 - 1145
Target Start/End: Original strand, 39328402 - 39328459
Alignment:
Q  1088 tatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||    
T  39328402 tatatatatggggtttgctagaagacaccttttatgaaggtgtcttttagcaagttat 39328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1101 - 1145
Target Start/End: Complemental strand, 34673625 - 34673581
Alignment:
Q  1101 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  34673625 tttgctagaagacaccttttatgaaggtgtcttttagcaagttat 34673581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 3283350 - 3283276
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| | ||||||||||||||  | ||||||| |||||||||||| |||||||||||    
T  3283350 tttatgaaggtgtcttttagcaaagctataactaaaaagtaaa-aatcacaccttgaggtgtgggttgctaaaaga 3283276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 41355495 - 41355569
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||| |||||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  41355495 tttatgaaggtgtcttatagcaaagttataactaaaaagtgga-aatcacaccttgagttgtgggttgctaaaaga 41355569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 52945651 - 52945725
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||  |||||||||||    
T  52945651 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacactttgaggtgtgagttgctaaaaga 52945725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 6125771 - 6125817
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  6125771 gttttgctagaagacacattttatgaaggtgtcttttagcaagttat 6125817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 21396020 - 21395974
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21396020 gttttgctagaagacaccttttatgaaggtgttttttagcaagttat 21395974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 36418714 - 36418760
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  36418714 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 36418760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 35280490 - 35280562
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||    
T  35280490 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgagttgtgggttgctaaaa 35280562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 38101267 - 38101195
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||| | |||||||||    
T  38101267 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtaggttgctaaaa 38101195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 46774086 - 46774154
Alignment:
Q  273 gatctatctccaatcggcaggtgttggaaaaagatgagaagtgttgttcaatttaaaggcgtgttgtta 341  Q
    ||||||| |||||| | || ||||||||||||||||||||||||| || |||||||||| | |||||||    
T  46774086 gatctatttccaatagacatgtgttggaaaaagatgagaagtgttattaaatttaaaggtgggttgtta 46774154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1085 - 1145
Target Start/End: Complemental strand, 54253968 - 54253908
Alignment:
Q  1085 ttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||| || ||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  54253968 ttatatatatatgggttttgctagaagacgcattttatgaaggtgtattttagcaagttat 54253908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 54411870 - 54411787
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||| ||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||| | ||||||||||| | ||||||    
T  54411870 tttataaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtaggttgctaaaagacactttcat 54411787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 4126055 - 4126129
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| || ||||||||||| ||||||| |||||||| || ||||||| ||||||||||||||| ||||||||    
T  4126055 tttatgaatgtatcttttagcaaagttataattaaaaagtgga-aatcacaccttgaggtgtggattactaaaaga 4126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 5232789 - 5232730
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || ||||||||| |||||||  |||||||||||||| |||||||||||||    
T  5232789 tatatatatatgggttttgctacaagacacattttatgaaggtgtcatttagcaagttat 5232730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 11238748 - 11238822
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||| ||| ||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  11238748 tttatgaagatgtattttaacaaagttataactaaaaagtaga-aatcacaccttgaggtgtgggttgctaaaaga 11238822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 13700328 - 13700254
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||| ||||||| ||| |||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  13700328 tttatgaaggtatcttttaacaaagttataactaaaaagtgga-aatcacacattgaggtgtgggttgctaaaaga 13700254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 45408234 - 45408293
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  45408234 tatatatatatatgttttgctagaaaacaccttttatgaaagtgtcttttagcaagttat 45408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 45408328 - 45408402
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| |||  ||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  45408328 tttatgaaggtgtcttttaccaaaattataactaaaaagtgga-aatcacaccttgaggtgtgcgttgctaaaaga 45408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 50090908 - 50090834
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||| |||||||||  ||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  50090908 tttatgaaagtgttttttagcaaaattataactaaaaagtgga-aatcacaccttaaggtgtggattgctaaaaga 50090834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1203
Target Start/End: Original strand, 54160470 - 54160553
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattg 1203  Q
    ||||||||||||||||||| ||| |||||||| ||||||| || ||||||  ||||||||||||||| |||||||| || |||||||    
T  54160470 tttatgaaggtgtcttttaacaaagttataacaaaaaagt-gaaaatcac--cttgaggtgtggattactaaaagacatcttcattg 54160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1141
Target Start/End: Complemental strand, 54411963 - 54411909
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||    
T  54411963 tatatatatatg-gttttgctagaagacaccttttatgaaggtgttttttagcaag 54411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 37702729 - 37702683
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||    
T  37702729 gttttgctagaagacaccttttttgaaagtgtcttttagcaagttat 37702683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1335 - 1377
Target Start/End: Original strand, 46762865 - 46762907
Alignment:
Q  1335 tttcttataggattcattggccgtttaattgatgtatcagtga 1377  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  46762865 tttcttatatgattcattggccatttaattgatgtatcagtga 46762907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 19855546 - 19855617
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| || ||||||||||||||| || |||||||    |||||||||||||||||||||    
T  19855546 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcaca---cgaggtgtggattgctaaaaga 19855617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1118 - 1189
Target Start/End: Complemental strand, 37702648 - 37702577
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1189  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||| |||||| |||||  ||||| ||||||||    
T  37702648 tttatgaaggtgttttttagcaaagttataactaaaaagtggat-atcacaccttgatttgtggcttgctaaa 37702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1106 - 1145
Target Start/End: Original strand, 8351060 - 8351099
Alignment:
Q  1106 tagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  8351060 tagaagacactttttatgaaggtgtcttttagcaagttat 8351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 20513109 - 20513035
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||| ||| |||||||||||||||| || ||||||| ||||  |||||| |||||||||||    
T  20513109 tttatgaaggtgttttttaacaaagttataactaaaaagtgga-aatcacaccttggagtgtgggttgctaaaaga 20513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1154
Target Start/End: Original strand, 26103748 - 26103779
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaa 1154  Q
    ||||||||||||||||||||||||||||||||    
T  26103748 gaaggtgtcttttagcaagttataactaaaaa 26103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 27038061 - 27037987
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||||||  ||||||||| || || ||||||||    
T  27038061 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacgccttgaggtgggggtttctaaaaga 27037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1249 - 1324
Target Start/End: Original strand, 46762702 - 46762777
Alignment:
Q  1249 ccctctttataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttcttctat 1324  Q
    |||||| ||||||| ||||| ||||| |||  ||| ||| |||||||| |||| |||||||||| |||||||||||    
T  46762702 ccctctctataccgtgaaggcaataaatcttattatcttcgttttctgcttctatttactgttctctttcttctat 46762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 51614687 - 51614613
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| |||||||||||||| ||  |||||||||||||||  | |||||||  |||||||||||||||||||||||    
T  51614687 tttataaaggtgtcttttagtaaaattataactaaaaagtcca-aatcacacattgaggtgtggattgctaaaaga 51614613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Complemental strand, 53581618 - 53581551
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  53581618 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 53581551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 19855465 - 19855511
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||||||    
T  19855465 gttttgcgagaagaaaccttttatgaaggtgtctattagcaagttat 19855511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 35711987 - 35711941
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  |||| || ||||||||||||||||||||    
T  35711987 gttttgctagaagacacattttacgagggtgtcttttagcaagttat 35711941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 36418795 - 36418867
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||| ||||||||||||||| ||||||||| |||||||| ||| |||||| ||| |||||||  |||||||||    
T  36418795 tttatcaaggtgtcttttagcaaagttataattaaaaagtggat-atcacaccttaaggtgtgacttgctaaaa 36418867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 50801633 - 50801600
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  50801633 gaaggtgtgttttagcaagttataactaaaaagt 50801600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 50874247 - 50874280
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  50874247 gaaggtgtgttttagcaagttataactaaaaagt 50874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 53467484 - 53467517
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  53467484 gaaggtgtgttttagcaagttataactaaaaagt 53467517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 2e-31; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 27131078 - 27131152
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27131078 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 27131152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1099 - 1192
Target Start/End: Complemental strand, 32392331 - 32392237
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||| |||||||||||    
T  32392331 gttttgctagaagacaccttttatgaaggtgtcttttagcaagtttataactaaaaagtggataatctcaccttgaggtgtgggttgctaaaaga 32392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 7596984 - 7596879
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1185  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||  |||||||||| ||||     
T  7596984 tatatatatatga-ttttgctaaaagacactctttatgaaggtgtcttttaacaaattataactaaaaagtggataatcacacattgaggtgtgaattgt 7596886  T
Q  1186 taaaaga 1192  Q
    |||||||    
T  7596885 taaaaga 7596879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 48709109 - 48709035
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||| |||||    
T  48709109 tttatgaaggtgtcttttagcaagttattactaaaaagtggatagtcacaccttgaggtgtggattgctgaaaga 48709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1118 - 1189
Target Start/End: Original strand, 20568340 - 20568411
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1189  Q
    ||||| |||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20568340 tttatcaaggtgtcttgtagcaaattataactaaaaagtggataatcacaccttgaggtgtggattgctaaa 20568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1100 - 1192
Target Start/End: Complemental strand, 28333855 - 28333763
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||| |||| | |||||||||||    
T  28333855 ttttgctagaagacaccttgtatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttgacgtgttggttgctaaaaga 28333763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 3875220 - 3875302
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| | ||||||    
T  3875220 tttatgaaggtttcttttaacaagttataa-taaaaagttgataatcacaccttgaggtatggattgttaaaagacactttcat 3875302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 21993551 - 21993625
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  21993551 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 21993625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 27130984 - 27131043
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  27130984 tatatatatatgggttttgctagaagacaccctttatgaaggtgttttttagcaagttat 27131043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 41378445 - 41378371
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  41378445 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 41378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1120 - 1190
Target Start/End: Complemental strand, 8953360 - 8953290
Alignment:
Q  1120 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  8953360 tatgaagatgtcttttaataagttataactaaaaagttgataatcacaccttgatgtgtgaattgctaaaa 8953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 5995221 - 5995162
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||    
T  5995221 tatatatatatgggttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 5995162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 26928039 - 26927965
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  26928039 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgagttgctaaaaga 26927965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 41585953 - 41585879
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  41585953 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 41585879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Original strand, 24251910 - 24251968
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggt 1176  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||    
T  24251910 tttatgaaggtgtcttttaacaagttataactaaaaagttgattatcacatcttaaggt 24251968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 27946897 - 27946823
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||| | ||| || |||| ||||||||||||    
T  27946897 tttatgaaggtgtcttttaacaaattataactaaaaaattgataatcatatcttaagatgtgaattgctaaaaga 27946823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 38368241 - 38368315
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||| || | |||||||||||  |||||||||||    
T  38368241 tttatgaaggtgtattttagcaagttataactaaaaattggataaacataccttgaggtgtgacttgctaaaaga 38368315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1118 - 1179
Target Start/End: Complemental strand, 42373532 - 42373471
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtg 1179  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||  ||||||||||    
T  42373532 tttatgaagatgtcttttagcaagttctaactaaaaagtggataatcacatattgaggtgtg 42373471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 27946980 - 27946932
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27946980 gagttttgctagaagacactctttatggaggtgtcttttagcaagttat 27946932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1099 - 1154
Target Start/End: Complemental strand, 48625039 - 48624983
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaa 1154  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  48625039 gttttgctataagacaccttttatgaaggtgtcttttagcaaagttataactaaaaa 48624983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 5995127 - 5995052
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||  |||||||||||||  ||  ||||||| |||||||||| |||||||||||||    
T  5995127 tttatgaaggtgtcttttagcaaaattataactaaaaaagtgtaaatcacaccttgaggtgtagattgctaaaaga 5995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 35221739 - 35221665
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||  || |||||||||||| |||||||||||    
T  35221739 tttatgaaggtgtcttttagctaagttataactaaaaagtaga-aatttcaccttgaggtgtgggttgctaaaaga 35221665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 35983188 - 35983262
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||| ||||||||||| |||||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  35983188 tttatgaaggtatcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtgggttgctaaaaga 35983262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 36004600 - 36004674
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||| ||||||||||| |||||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  36004600 tttatgaaggtatcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtgggttgctaaaaga 36004674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 41037206 - 41037280
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| ||| |||||||    
T  41037206 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgttaaaaga 41037280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 48227305 - 48227231
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| ||||||||||||||||| |||||||||||||||| || ||||||| ||||| |||||| |||||||||||    
T  48227305 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaagtgtgggttgctaaaaga 48227231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 3203446 - 3203400
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  3203446 gttttgctagaagataccttttatgaaggtgtcttttagcaagttat 3203400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1100 - 1150
Target Start/End: Complemental strand, 20418026 - 20417976
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1150  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  20418026 ttttgctagaagacaccttttatgaatgtgtcttttagcaaattataacta 20417976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1124 - 1188
Target Start/End: Complemental strand, 9522534 - 9522470
Alignment:
Q  1124 aaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||| ||||||||||||||||||||    
T  9522534 aaggtgtcttttatcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaa 9522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1100 - 1192
Target Start/End: Complemental strand, 20009273 - 20009181
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||||||  ||||||||||||||||||| | ||||||||||||||||| | | ||||||| |||||||| ||  |||||||||||    
T  20009273 ttttgctataagacacattttatgaaggtgtcttttaacaaagttataactaaaaag-taaaaatcacatcttgaggtatgagttgctaaaaga 20009181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 21993471 - 21993516
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  21993471 ttttgctagaagacacattttatgaaggtgtcttttagcaagttat 21993516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1099 - 1144
Target Start/End: Original strand, 31953159 - 31953204
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1144  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  31953159 gttttgctagaacacaccttttatgaaggtgtcttttagcaagtta 31953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 3407220 - 3407148
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||  |||||||||    
T  3407220 tttatgaagctgtcttttagcaagttataactaaaaagtgaataaatacaccttgaagtgtgtgttgctaaaa 3407148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 35221827 - 35221779
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  35221827 gagttttgctagaagatactttttatgaaggtgtcttttagcaagttat 35221779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1099 - 1143
Target Start/End: Complemental strand, 43077648 - 43077604
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1143  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  43077648 gttttgctagaagacaccttttatgaaggtgttttttagcaagtt 43077604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 3203365 - 3203287
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-----ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| ||     ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  3203365 tttatgaaggtgtcttttagctagcaaatttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 3203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1084 - 1145
Target Start/End: Original strand, 3961165 - 3961223
Alignment:
Q  1084 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||   ||||||||||||||||  |||||||| |||||||||||||||||||    
T  3961165 tttatatatatgt---ttttgctagaagacacattttatgaaagtgtcttttagcaagttat 3961223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 12362906 - 12362823
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||| ||||||||| ||| |||||| |||||||||||||| || | ||| ||||||| |||||||| ||| || |||||    
T  12362906 tttatgaagatgtcttttaacaaattataattaaaaagttgataaacataccttaaggtgtgaattgctaacagacatattcat 12362823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 14313939 - 14313998
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  14313939 tatatatatatatgttttgttagaagataccttttatgaaggtgtcttttagcaagttat 14313998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 20568246 - 20568304
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||| |||| |||||| |||||||||||||| |||||||||||||||||||    
T  20568246 tatatatatatgattttt-ctagaaaacaccctttatgaatgtgtcttttagcaagttat 20568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 24611497 - 24611571
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||||||||| ||| |||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  24611497 tttatgaaagtgtcttttaacaaagttataactaaaaagt-gaaaatcacacattgaggtgtgggttgctaaaaga 24611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1140
Target Start/End: Complemental strand, 31853857 - 31853805
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaa 1140  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||||||||||||    
T  31853857 tatatatatatgagttttgctagaagaca--ctttttgaaggtgtcttttagcaa 31853805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 31953240 - 31953314
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||| ||| |||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  31953240 tttatgaaggtgttttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgtgttgctaaaaga 31953314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 35983094 - 35983153
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  35983094 tatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttat 35983153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 36004506 - 36004565
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  36004506 tatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttat 36004565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 45099958 - 45100017
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  45099958 tatatatatatgggttttgctagaagacacattttatgaaggtgttttttaacaagttat 45100017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 45100052 - 45100126
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||| |||||||||| ||  ||||||| ||||||| |||| |||||||||||    
T  45100052 tttatgaaggtgtcttttagcaaagttacaactaaaaag-tgtaaatcacatcttgaggcgtgggttgctaaaaga 45100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1121 - 1190
Target Start/End: Complemental strand, 3350085 - 3350016
Alignment:
Q  1121 atgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||||||||||||| || ||||||||||||||| || ||||||| |||||| ||||| |||||||||    
T  3350085 atgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaa 3350016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1086 - 1144
Target Start/End: Complemental strand, 9522630 - 9522573
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1144  Q
    ||||||||| || |||||||||||||||||  ||||||||| |||||||||||||||||    
T  9522630 tatatatatatg-gttttgctagaagacacattttatgaagatgtcttttagcaagtta 9522573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1146 - 1192
Target Start/End: Original strand, 31853769 - 31853815
Alignment:
Q  1146 aactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  31853769 aactaaaaagtggataatcacaccttgaagtgtggattgctaaaaga 31853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 42373613 - 42373567
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||    
T  42373613 gttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 42373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1099 - 1144
Target Start/End: Complemental strand, 46003888 - 46003843
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1144  Q
    |||||||||||||||||  || ||||||||||||||||||||||||    
T  46003888 gttttgctagaagacacatttcatgaaggtgtcttttagcaagtta 46003843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 12362989 - 12362941
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||| || |||||||||||||||||||| |||||||||| ||||||||    
T  12362989 gagttctgttagaagacaccctttatgaatgtgtcttttaacaagttat 12362941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 3961258 - 3961332
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| ||||||| |||||||||  ||||||||||||| |||| ||| ||| |||||||||||| |||||||||||    
T  3961258 tttattaaggtgttttttagcaaaattataactaaaaa-ttgaaaatgacatcttgaggtgtgggttgctaaaaga 3961332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 14656535 - 14656609
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||| |||||||  ||||||||||| || ||||||||    
T  14656535 tttatgaaggtgtcttttaacaaagttataact-aaaaggtgaaaatcacacattgaggtgtgggtttctaaaaga 14656609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 15957340 - 15957407
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  15957340 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 15957407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 27168379 - 27168446
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  27168379 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 27168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1124 - 1190
Target Start/End: Complemental strand, 938964 - 938898
Alignment:
Q  1124 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  938964 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 938898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 3875109 - 3875155
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  |||||||| |||| ||||||||||||||    
T  3875109 gttttgctagaagacacattttatgaaagtgtattttagcaagttat 3875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1103 - 1141
Target Start/End: Original strand, 38368164 - 38368202
Alignment:
Q  1103 tgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  38368164 tgctagaagacaccttttatgaatgtgtcttttagcaag 38368202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 41378526 - 41378480
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  41378526 gttttgctagaagacactttttattaaggtgttttttagcaagttat 41378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1141
Target Start/End: Complemental strand, 48227386 - 48227344
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||    
T  48227386 gttttgctggaagacaccttttatgaaggtgtattttagcaag 48227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 2509446 - 2509479
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  2509446 gaaggtgtgttttagcaagttataactaaaaagt 2509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 2936710 - 2936677
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  2936710 gaaggtgtgttttagcaagttataactaaaaagt 2936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 11766191 - 11766158
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  11766191 gaaggtgtgttttagcaagttataactaaaaagt 11766158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1096 - 1145
Target Start/End: Complemental strand, 28059382 - 28059334
Alignment:
Q  1096 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  28059382 tgagttttgctagaagacaccttttatgaagg-atcttttaggaagttat 28059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 28912152 - 28912119
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  28912152 gaaggtgtgttttagcaagttataactaaaaagt 28912119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 69; Significance: 3e-30; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1086 - 1194
Target Start/End: Complemental strand, 24690 - 24582
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1185  Q
    ||||||||| |||||||||||||||||||   |||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||  ||||    
T  24690 tatatatatatgagttttgctagaagacattttttatgaaggtgtcttgtagcaagttataaataaaaagttgataatcaaatcttgaggtgtgacttgc 24591  T
Q  1186 taaaagaga 1194  Q
    |||||||||    
T  24590 taaaagaga 24582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1098 - 1190
Target Start/End: Complemental strand, 35994 - 35902
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||| || || |||| || |||||||  ||||||||||    
T  35994 agttttgctagaagacaacttttatgaaggtgtcttttagcaaaattataactaaaaagtaga-aaacacacctggaggtgttaattgctaaaa 35902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 1e-29; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1099 - 1178
Target Start/End: Complemental strand, 88264 - 88185
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1178  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  88264 gttttgctagaagataccctttatgaaggtgtcttttaggaagttataactaaaaagttgataatcacaccttgaggtgt 88185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 103321 - 103249
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  103321 tttatgaaggtgttttttaggaagttataactaaaaagttgataatcacaacttgaggtgtggtttactaaaa 103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1102 - 1145
Target Start/End: Complemental strand, 103399 - 103356
Alignment:
Q  1102 ttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  103399 ttgctagaagacaccctttatgaaggtgttttttagtaagttat 103356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 4e-29; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 1102 - 1192
Target Start/End: Complemental strand, 27175560 - 27175470
Alignment:
Q  1102 ttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||||||||    
T  27175560 ttgctagaagacacattttatgaaggtgtcttttagcaagttataactaaaaagtggataatcacaccttgaggtgttgcttgctaaaaga 27175470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1099 - 1192
Target Start/End: Original strand, 10862577 - 10862670
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  10862577 gttttgctagaagacaccttttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 10862670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 34125620 - 34125546
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34125620 tttatgaatgtgtcttttagcaacctataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 34125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 5601711 - 5601783
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  5601711 tttatgaaggtgtcttttagcaaattataactaaaaagttgataatcacaccttgagccgtggattgctaaaa 5601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1086 - 1156
Target Start/End: Original strand, 6231208 - 6231279
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagt 1156  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  6231208 tatatatatatgagttttgctagaagacaccatttatgaaggtgtcttttagcaaagttataactaaaaagt 6231279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 29511942 - 29511835
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||||||| ||||  ||||||||||||||||||||| || ||||||||||||||| ||||| |||| |||||||||||  |||    
T  29511942 tatatatatatgggttttgctagaaaacacattttatgaaggtgtcttttagcaaaattataactaaaaagtggataagcacaccttgaggtgtgacttg 29511843  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  29511842 ctaaaaga 29511835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Original strand, 34450304 - 34450409
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| ||| ||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||| || ||||||| |||||||||||| |||    
T  34450304 tatatatatatga-ttttgctagaagacacattttatgaaggtgtcttttagcaaagttataaataaaaagtgga-aatcacaccttgaggtgtgggttg 34450401  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  34450402 ctaaaaga 34450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 4206514 - 4206588
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||||    
T  4206514 tttatgaatgtgtcttttagcaagttataactaaaaagtggataatcacaccttaaggtgtggcttgctaaaaga 4206588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 25880661 - 25880735
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  25880661 tttatgaaggtgttttttaacaagttataactaaaaagttgataatcacactttgaggtgtggattgctgaaaga 25880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1082 - 1145
Target Start/End: Original strand, 4206413 - 4206476
Alignment:
Q  1082 attttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4206413 attttatatatatatgagttttgctagaagacacattttatgaaggtgtcttttagcaagttat 4206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 18924705 - 18924646
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18924705 tatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 18924646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Original strand, 27097021 - 27097127
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtctttta-gcaagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||||||||||||| |||||||||||||  |||| | |||||||||||||||||| || ||||||| |||||||||||| |||    
T  27097021 tatatatatatgggttttgctagaagacaccttttatgaaggtgttatttaggaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttg 27097119  T
Q  1185 ctaaaaga 1192  Q
    | ||||||    
T  27097120 ccaaaaga 27097127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 36779910 - 36779802
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataact--aaaaagttgataatcacaacttgaggtgtggat 1182  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||| || |||||||  ||||||||| |||    
T  36779910 tatatatatatgagttttcctagaagacaccttttatgaaggtgtcttttagcaaagttttaactaaaaaaagtgga-aatcacacattgaggtgtagat 36779812  T
Q  1183 tgctaaaaga 1192  Q
    ||||||||||    
T  36779811 tgctaaaaga 36779802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1123 - 1192
Target Start/End: Complemental strand, 39961605 - 39961536
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  39961605 gaaggtgtcttttatcaaattataactaaaaagttgataatcatactttgaggtgtggattgctaaaaga 39961536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 9548282 - 9548208
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  9548282 tttatgaaggtgtcttttagcgaagttataactaaaaagtgga-aatcacatcttgaggtgtgggttgctaaaaga 9548208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 29471706 - 29471632
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||  ||||||||||||||||||||||||    
T  29471706 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcactccttgaggtgtggattgctaaaaga 29471632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 12895410 - 12895484
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| | |||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  12895410 tttatgaaggtgtcttttaacaatgctataactaaaaagt-gaaaatcacatcttgaggtgtggattgctaaaaga 12895484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 14747462 - 14747356
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||||||||||| | |||||||||||||||||| || || |||||| ||||||  ||| ||||||| ||| |||||||| |||    
T  14747462 tatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttggcaaaattataattaaaaa-atgaaaatcacaccttaaggtgtgggttg 14747364  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  14747363 ctaaaaga 14747356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 24314296 - 24314370
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| ||||||||||||| || || ||||||| ||||||||||| ||||||||||||    
T  24314296 tttatgaaggtgtcttttagcaaagttataactaaaatgtgga-aatcacaccttgaggtgtgaattgctaaaaga 24314370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 29471800 - 29471741
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29471800 tatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 29471741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 33740222 - 33740281
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  33740222 tatatatatatgggttttactagaagacaccttttatgaaggtgtcttttagcaagttat 33740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 21950721 - 21950804
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    |||||||| |||||||||||||| |||||||||||||||| || ||||| | |||||||||||| ||||||||||| | ||||||    
T  21950721 tttatgaatgtgtcttttagcaaagttataactaaaaagt-gaaaatcataccttgaggtgtgggttgctaaaagacactttcat 21950804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 9548376 - 9548317
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  9548376 tatatatatatgggttttgctataagacatcttttatgaaggtgtcttttagcaagttat 9548317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 10664763 - 10664689
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||| |||||||||||| |||||||||||||||| || ||||||| |||||||||||| || ||||||||    
T  10664763 tttatgaaggcgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttactaaaaga 10664689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 10664857 - 10664798
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  10664857 tatatatatatgaattttgctataagacacattttatgaaggtgtcttttagcaagttat 10664798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 12725789 - 12725715
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  |||||||||||  ||||||||||    
T  12725789 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacactttgaggtgtggcctgctaaaaga 12725715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 18924611 - 18924537
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||| |||||||| |||||||||||||||| || ||||||| |||||||| ||| |||||||||||    
T  18924611 tttatgaaggtgtcctttagcaaagttataactaaaaagtgga-aatcacaccttgaggtatgggttgctaaaaga 18924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 25810570 - 25810512
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  25810570 tatatatatgtg-gttttgctagaagataccttttatgaaggtgttttttagcaagttat 25810512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 16719880 - 16719834
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  16719880 gttttgctagaagacaccttttatgaaggtgtcttttagctagttat 16719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1086 - 1148
Target Start/End: Original strand, 33471418 - 33471480
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataac 1148  Q
    ||||||||| | ||||||||||||||||  | |||||||| ||||||||||||||||||||||    
T  33471418 tatatatatataagttttgctagaagacgtcttttatgaatgtgtcttttagcaagttataac 33471480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 5534361 - 5534289
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||| | ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||    
T  5534361 tttatgaaggtattttttagcaaagttataattaaaaagttga-aatcacatcttgaggtgtggattactaaaa 5534289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 39089175 - 39089103
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||| ||||||||||||| |||||||||||||| | || ||||| | ||||||||||||||||||||||    
T  39089175 tttatgaagatgtcttttagcaaagttataactaaaaaatgga-aatcataccttgaggtgtggattgctaaaa 39089103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 42090496 - 42090579
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||||| ||||||||||||||||  ||| ||||||| ||| ||||||||||||  |||||| | ||||||    
T  42090496 tttatgaaggtgtcttttagcaaagttataactaaaaa-atgaaaatcacatcttaaggtgtggattgtgaaaagacactttcat 42090579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Complemental strand, 12725871 - 12725824
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  12725871 agttttgctagaagacaccttttataaagatgtcttttagcaagttat 12725824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1096 - 1143
Target Start/End: Complemental strand, 39435087 - 39435040
Alignment:
Q  1096 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1143  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  39435087 tgagttttgctagaagacaccttttatgaaagtgtcttttaacaagtt 39435040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Original strand, 42090406 - 42090461
Alignment:
Q  1090 tatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||| ||||||||||| ||||||||| |||||||| |||||||||||||| ||||    
T  42090406 tatatatgagttttgctggaagacaccttttatgaaagtgtcttttagcaaattat 42090461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 1750071 - 1750025
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  1750071 gttttgctagaagacacattttatgaaggtgtcttttagcaggttat 1750025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 25880576 - 25880622
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  25880576 gttttgctagaagacactttttatgaaggtgttttttagcaagttat 25880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 44539915 - 44539843
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||| ||||||| |||||||||||||||| | ||| |||||| ||| |||||||| |||||||||    
T  44539915 tttatgaaggtgtattttagcaaagttataactaaaaaatggat-atcacaccttaaggtgtggcttgctaaaa 44539843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 39961693 - 39961645
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  39961693 gagttttgctagaagatacattttatgaaggtgtcttttaacaagttat 39961645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 11675278 - 11675345
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  11675278 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 11675345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 24314202 - 24314261
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || ||||||||| || ||||| ||||| ||||||||||||||||| ||||    
T  24314202 tatatatatatgggttttgctaaaatacaccttttataaaggtgtcttttagcaaattat 24314261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 34082692 - 34082759
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  34082692 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 34082759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 39089269 - 39089210
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||| ||||||||||| |||||||| |||||||||| ||||||||    
T  39089269 tatatatatataggttttgttagaagacaccttttatgaatgtgtcttttaacaagttat 39089210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1179
Target Start/End: Complemental strand, 1749990 - 1749929
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtg 1179  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||| ||| |||||||||||    
T  1749990 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aattacaccttgaggtgtg 1749929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1162
Target Start/End: Complemental strand, 2969720 - 2969675
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataa 1162  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||    
T  2969720 tttatgaaggtgtcttttagcaaagttataactaaaaggtggataa 2969675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 29512144 - 29512111
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  29512144 gaaggtgtgttttagcaagttataactaaaaagt 29512111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Complemental strand, 44539996 - 44539951
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||| ||||||||| | |||||||||||||| |||||||||||||    
T  44539996 ttttgttagaagacatcttttatgaaggtgtcatttagcaagttat 44539951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-28; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1099 - 1192
Target Start/End: Complemental strand, 23129693 - 23129600
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||| ||||| ||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23129693 gttttgttagaatacacattttatgaaggtgtcttttaacaagttataactaaaaggttgataatcacatcttgaggtgtggattgctaaaaga 23129600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 27365797 - 27365869
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27365797 tttataaaggtgtcttttagcaagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaa 27365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 19863217 - 19863111
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1185  Q
    ||||||||| || |||||||| ||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||||||||  ||||| ||||||||||    
T  19863217 tatatatatatgggttttgctggaagacactttttgtgaaggtgtcttttaacaagttaaaactaaaaagtggataatcacactttgagatgtggattgc 19863118  T
Q  1186 taaaaga 1192  Q
    |||||||    
T  19863117 taaaaga 19863111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1119 - 1192
Target Start/End: Original strand, 19995358 - 19995431
Alignment:
Q  1119 ttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  19995358 ttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaaga 19995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 13960455 - 13960382
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||| |||||||||||    
T  13960455 tttatgaaggtgtcttttagcaagtttatgactaaaaagtggataatcacatcttgaggtgttgattgctaaaa 13960382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 16490996 - 16490924
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  16490996 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaa 16490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1181
Target Start/End: Complemental strand, 5497820 - 5497757
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtgga 1181  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  5497820 tttatgaaagtgtctttcagcaagttataactaaaaagttgataatcacaccttgaagtgtgga 5497757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 17689416 - 17689342
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  17689416 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtggattgctaaaaga 17689342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 16273723 - 16273677
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16273723 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 16273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 21913904 - 21913858
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21913904 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 21913858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 18015724 - 18015807
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||||| ||||||||||| || |||||    
T  18015724 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaagacatcttcat 18015807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 16490826 - 16490721
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| |  |||||||||||||||||| ||||||||| ||||||||| | ||||||| |||||||||| || ||||||| ||| |||||||| |||    
T  16490826 tatatatatataggttttgctagaagacaccttttatgaagatgtcttttaccaaagttat-actaaaaagtgga-aatcacaccttaaggtgtgggttg 16490729  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  16490728 ctaaaaga 16490721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 19323871 - 19323812
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19323871 tatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 19323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 23204458 - 23204532
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  23204458 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgacttgctaaaaga 23204532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1094 - 1145
Target Start/End: Original strand, 27365711 - 27365762
Alignment:
Q  1094 tgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  27365711 tgtgtgttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 27365762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1128 - 1192
Target Start/End: Original strand, 25593283 - 25593347
Alignment:
Q  1128 tgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||| |||||||  |||||||||||    
T  25593283 tgtcttttagcaagttataactaaaaagtggataattacaccttaaggtgtgagttgctaaaaga 25593347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 9741807 - 9741881
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  9741807 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaaga 9741881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 20269221 - 20269280
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||  ||||||||||||||| | ||||||||||||||||||||||||||||    
T  20269221 tatatatatatggattttgctagaagacagcttttatgaaggtgtcttttagcaagttat 20269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 23204364 - 23204423
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  23204364 tatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttaacaagttat 23204423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 28038375 - 28038316
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||  |||||||| |||||||||||||||||||    
T  28038375 tatatatatatgggttttgctagaagacacattttatgaaagtgtcttttagcaagttat 28038316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 28813135 - 28813061
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| |||| |||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  28813135 tttataaaggcgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 28813061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 37172563 - 37172504
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  37172563 tatatatatgtgggtttggctagaagtcaccttttatgaaggtgtcttttaacaagttat 37172504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1086 - 1144
Target Start/End: Complemental strand, 31056543 - 31056485
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1144  Q
    |||||||| | | |||||||||||||||||| ||||||||||||| |||||||||||||    
T  31056543 tatatataggggggttttgctagaagacaccttttatgaaggtgtattttagcaagtta 31056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 38758778 - 38758732
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  38758778 gttttgctagaagacacattttatgaaggtgtcttttagcaagttat 38758732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1086 - 1150
Target Start/End: Complemental strand, 15388281 - 15388217
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1150  Q
    ||||||||| |  |||||||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  15388281 tatatatatataggttttgctagaacacaccttttataaatgtgtcttttagcaagttataacta 15388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 38293555 - 38293472
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    |||||||| |||||||||| ||| |||||||||||||||| || ||||||| | |||||||||||||| ||||||| || |||||    
T  38293555 tttatgaacgtgtcttttaacaaagttataactaaaaagtgga-aatcacaccatgaggtgtggattgttaaaagacatcttcat 38293472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 18015631 - 18015689
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  18015631 tatatatatatgggttttgctaga-gacaccttatatgaaggtgtcttttagcaagttat 18015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 19323777 - 19323703
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||||||||||||| |||||||||||||||| ||| |||||| ||| |||||||  |||||||||||    
T  19323777 tttatgaaagtgtcttttagcaaagttataactaaaaagtggat-atcacaccttaaggtgtgccttgctaaaaga 19323703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1106 - 1145
Target Start/End: Complemental strand, 31042674 - 31042635
Alignment:
Q  1106 tagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  31042674 tagaagacaccctttatgaaggtgtattttagcaagttat 31042635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 33429313 - 33429254
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||  | |||||||||||||||||  |||||||||||| |||||||||||||||    
T  33429313 tatatatattagggttttgctagaagacacattttatgaaggtgccttttagcaagttat 33429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 37172469 - 37172395
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||| ||  ||||||||||||||| || ||||||| ||| |||| |||||||||||||||    
T  37172469 tttatgaaggtgtcttttagaaaaattataactaaaaagt-gaaaatcacaccttaaggtatggattgctaaaaga 37172395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 38758698 - 38758624
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| ||||||||||||| ||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  38758698 tttataaaggtgtcttttaacaaagttataactaaaaagt-gaaaatcacaccttgagatgtgggttgctaaaaga 38758624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 13960535 - 13960489
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||    
T  13960535 gtttcgctagaagacactttttatgaaggtgtcttttagcaagttat 13960489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1118 - 1164
Target Start/End: Complemental strand, 31042600 - 31042554
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatc 1164  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||    
T  31042600 tttattaaagtgtcttttagcaagttataacaaaaaagttgataatc 31042554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1118 - 1164
Target Start/End: Complemental strand, 31056449 - 31056403
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatc 1164  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||    
T  31056449 tttattaaagtgtcttttagcaagttataattaaaaagttgataatc 31056403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 2695223 - 2695290
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  2695223 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 2695290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1165
Target Start/End: Original strand, 19858480 - 19858527
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1165  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  19858480 tttatgaaaatgtcttttaacaagttataactaaaaagtggataatca 19858527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 9741726 - 9741772
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  9741726 gttttgctagaagacacattttatgaaggtgtcttttaacaaattat 9741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1124 - 1190
Target Start/End: Complemental strand, 14369820 - 14369754
Alignment:
Q  1124 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  14369820 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 14369754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 16994297 - 16994251
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  |||||||||||||  |||||||||||||    
T  16994297 gttttgctagaagacacattttatgaaggtgttgtttagcaagttat 16994251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1177
Target Start/End: Complemental strand, 19325115 - 19325055
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa--gttataactaaaaagttgataatcacaacttgaggtg 1177  Q
    |||||||||||||||||||||||   ||||||||||||||| || ||||||| |||||||||    
T  19325115 tttatgaaggtgtcttttagcaaagtttataactaaaaagtgga-aatcacaccttgaggtg 19325055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 26730381 - 26730310
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||||| |||||||||||||||   ||| ||||| | |||||||||| | |||||||||    
T  26730381 tttatgaaggtgtcttttagcaaagttataactaaaa--gtgaaaatcaaaccttgaggtgtaggttgctaaaa 26730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1132 - 1162
Target Start/End: Complemental strand, 37468730 - 37468700
Alignment:
Q  1132 ttttagcaagttataactaaaaagttgataa 1162  Q
    |||||||||||||||||||||||||||||||    
T  37468730 ttttagcaagttataactaaaaagttgataa 37468700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 17421748 - 17421715
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  17421748 gaaggtgtgttttagcaagttataactaaaaagt 17421715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 22701871 - 22701904
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  22701871 gaaggtgtgttttagcaagttataactaaaaagt 22701904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 25912170 - 25912203
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  25912170 gaaggtgtgttttagcaagttataactaaaaagt 25912203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 31240372 - 31240405
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  31240372 gaaggtgtgttttagcaagttataactaaaaagt 31240405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 31752170 - 31752137
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  31752170 gaaggtgtgttttagcaagttataactaaaaagt 31752137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 33832770 - 33832737
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  33832770 gaaggtgtgttttagcaagttataactaaaaagt 33832737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 39548968 - 39549001
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  39548968 gaaggtgtgttttagcaagttataactaaaaagt 39549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 3e-27; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 3210974 - 3210868
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| || ||| ||| |||||||||||| |||    
T  3210974 tatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaaagttataattaaaaagtgga-aataacaccttgaggtgtgggttg 3210876  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  3210875 ctaaaaga 3210868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 12176281 - 12176207
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12176281 tttatcaaggtgtcttttagcaggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 12176207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 12420709 - 12420635
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12420709 tttatcaaggtgtcttttagcaggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 12420635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 16645587 - 16645481
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| || ||||||| |||||||| ||| |||    
T  16645587 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagtaaagttataactaaaaagtgga-aatcacaccttgaggtatgggttg 16645489  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  16645488 ctaaaaga 16645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 42806293 - 42806376
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||| | ||||||    
T  42806293 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaagacactttcat 42806376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 1271097 - 1271025
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||| ||||| ||||||||||    
T  1271097 tttatgaaggtgtcttttaacaagttataattaaaaagtggataatcacaccttgaagtgtgaattgctaaaa 1271025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 10078292 - 10078351
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  10078292 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 10078351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1099 - 1156
Target Start/End: Complemental strand, 39590032 - 39589974
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagt 1156  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  39590032 gttttgctagaagacaccttttatgaaggtgtcttttagcaaagttataactaaaaagt 39589974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1118 - 1167
Target Start/End: Original strand, 40301373 - 40301422
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcaca 1167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40301373 tttatgaaggtgtcttttagcaagttataactaaaaagtggataatcaca 40301422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 1271195 - 1271136
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  1271195 tatatatatatgagttttgctagaagacaccctttataaaggtgttttttaacaagttat 1271136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Original strand, 16784330 - 16784377
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16784330 agttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 16784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 16930879 - 16930805
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| |||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  16930879 tttatgaaagtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaaga 16930805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 19922592 - 19922666
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||||||||| |||||||||||    
T  19922592 tttatgaaggtgtcttttagcaaagttataactaaaaggtgga-aatcacaccttgaggtgtgggttgctaaaaga 19922666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 23472595 - 23472669
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||| |||||||||||||    
T  23472595 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagttgtagattgctaaaaga 23472669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 30774113 - 30774172
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  30774113 tatatatatatgggttttgctagaagacaccttttatgaaggtgttttttagcaagttat 30774172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 42806197 - 42806256
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42806197 tatatatatatgagttttgctagaagacaccttttatgaagatgtcttttagcaaattat 42806256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1118 - 1191
Target Start/End: Complemental strand, 22812397 - 22812324
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaag 1191  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| ||||||||||    
T  22812397 tttatgaaggtgtcttttaacaaagttataactaaaaagt-gaaaatcacatcttgaggtgtgggttgctaaaag 22812324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 38498406 - 38498360
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38498406 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 38498360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 26912397 - 26912325
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||    
T  26912397 tttatgaaggtgtcttttagcaaagttataactgaaaag-tgaaaatcacaccttgaggtgtgggttgctaaaa 26912325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 33568143 - 33568071
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||||||||||| |||||||||||||| |  | ||||||| ||||||||||||||||||||||    
T  33568143 tttatgaaggtgtcttttagcaaagttataactaaaaaataaa-aatcacaccttgaggtgtggattgctaaaa 33568071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Original strand, 9478793 - 9478876
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||||  ||||||||||| ||||||||||| || |||||    
T  9478793 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacactttgaggtgtgggttgctaaaagatatcttcat 9478876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1101 - 1145
Target Start/End: Complemental strand, 14371658 - 14371614
Alignment:
Q  1101 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14371658 tttgctagaagacaccttttatgaaggtgtcttttagcaagttat 14371614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 9479402 - 9479461
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||    
T  9479402 tatatatatatgggttttgttagaagacacattttatgaaggtgtcttttagcaagttat 9479461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1180
Target Start/End: Complemental strand, 12295241 - 12295179
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtgg 1180  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  12295241 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgg 12295179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Original strand, 44873904 - 44873959
Alignment:
Q  1090 tatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  44873904 tatatatgagttttgttagaagacaccttttatgaaggtgttttttagcaagttat 44873959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 12176362 - 12176316
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12176362 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 12420790 - 12420744
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12420790 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1178
Target Start/End: Complemental strand, 38498325 - 38498265
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgt 1178  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||    
T  38498325 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgt 38498265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1099 - 1139
Target Start/End: Original strand, 23472515 - 23472555
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagca 1139  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23472515 gttttgctagaagacaccttttatgaaggtgtcttttagca 23472555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 254025 - 253951
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||| ||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||| | |||||||||||    
T  254025 tttaggaaagtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 253951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 661833 - 661907
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||| ||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||| | |||||||||||    
T  661833 tttaggaaagtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 661907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 10078386 - 10078457
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||  ||  |||||||||| || ||||||| |||||||||||| |||||||||||    
T  10078386 tttatgaaggtgtcttttagcaaagta--actaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 10078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 27545888 - 27545955
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| |||||||||||    
T  27545888 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagattgctaaaa 27545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 28539245 - 28539319
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| |  ||||| ||||| |||||||||||    
T  28539245 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcaaacattgagatgtgggttgctaaaaga 28539319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1099 - 1150
Target Start/End: Original strand, 38071134 - 38071185
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1150  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  38071134 gttttgctaaaagacacattttatgaatgtgtcttttagcaagttataacta 38071185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1106 - 1145
Target Start/End: Complemental strand, 39077432 - 39077393
Alignment:
Q  1106 tagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  39077432 tagaagacaccttttatgaaggtgtcttttagcaagttat 39077393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 16930960 - 16930914
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  16930960 gttttgatagaagataccttttatgaaggtgtcttttagcaagttat 16930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Complemental strand, 12295321 - 12295276
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||    
T  12295321 ttttgctataagacaccttttatgaatgtgtcttttagcaagttat 12295276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Complemental strand, 13327084 - 13327039
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||    
T  13327084 ttttgctagaagacacattttatgaaggtatcttttagcaagttat 13327039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 41624726 - 41624643
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    |||| |||||||||||||| ||| ||||||||||||||||  | ||||||| |||||||||||  ||||||||||| | ||||||    
T  41624726 tttacgaaggtgtcttttaacaaagttataactaaaaagtaaa-aatcacaccttgaggtgtgagttgctaaaagacactttcat 41624643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Original strand, 5224299 - 5224346
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  5224299 agttttgctataagacactttttatgaaggtgtcttttaacaagttat 5224346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1165
Target Start/End: Complemental strand, 13327005 - 13326958
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1165  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||    
T  13327005 tttatgaagttgtcttttatcaagttataactaaaaagtgaataatca 13326958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 26912491 - 26912432
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||| | || |||||||||||||||||  |||||||| |||||||||| ||||||||    
T  26912491 tatatatgtatgggttttgctagaagacacattttatgaatgtgtcttttaacaagttat 26912432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Complemental strand, 29125778 - 29125711
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  29125778 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 29125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1156
Target Start/End: Complemental strand, 39077358 - 39077319
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1156  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  39077358 tttatgaaggtgtcttttagcaaagttataactaaaaagt 39077319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Complemental strand, 40067709 - 40067662
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||||    
T  40067709 agtttttctagaagacatcatttatgaatgtgtcttttagcaagttat 40067662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Original strand, 44473747 - 44473794
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||| ||||||||| | || |||||||||||||||||||||||||    
T  44473747 agttttgttagaagacatctttcatgaaggtgtcttttagcaagttat 44473794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1127 - 1192
Target Start/End: Original strand, 847640 - 847705
Alignment:
Q  1127 gtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||| |||| ||||||||||| || ||||||| |||||||||| | |||||||||||    
T  847640 gtgtcttttagcaaagttaaaactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 847705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1179
Target Start/End: Original strand, 5224381 - 5224441
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtg 1179  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  5224381 tttatgaaggtgt-ttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtg 5224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1132 - 1178
Target Start/End: Original strand, 14819297 - 14819343
Alignment:
Q  1132 ttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1178  Q
    |||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  14819297 ttttagcaagttataactaaaaagttaataaacacaccttaaggtgt 14819343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1124 - 1190
Target Start/End: Complemental strand, 26043008 - 26042942
Alignment:
Q  1124 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  26043008 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 26042942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1088 - 1145
Target Start/End: Complemental strand, 1983645 - 1983588
Alignment:
Q  1088 tatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||| |||||||| || ||||||||  ||||||||||||||||||| ||| ||||    
T  1983645 tatatatatgagttttactggaagacacattttatgaaggtgtcttttaacaaattat 1983588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 13269302 - 13269269
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  13269302 gaaggtgtgttttagcaagttataactaaaaagt 13269269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 13290624 - 13290657
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  13290624 gaaggtgtgttttagcaagttataactaaaaagt 13290657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1174
Target Start/End: Original strand, 14041412 - 14041468
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgag 1174  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| |||||| ||||||    
T  14041412 tttatgaaggtgtcttttaacaaagttataactaaaaagtggat-atcacaccttgag 14041468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 25127999 - 25128032
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  25127999 gaaggtgtgttttagcaagttataactaaaaagt 25128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 28969175 - 28969103
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| || ||||||| ||| |||||||||||||||| || ||||||| ||||| |||||| |||||||||    
T  28969175 tttatgaaagtatcttttaacaaagttataactaaaaagtgga-aatcacaccttgaagtgtgggttgctaaaa 28969103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 30633133 - 30633100
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  30633133 gaaggtgtgttttagcaagttataactaaaaagt 30633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 38092183 - 38092255
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||| |||| ||| |||||||||||||||| || ||||||| ||||| ||||||||| ||||||    
T  38092183 tttatgaacgtgtcatttaacaaagttataactaaaaagtgga-aatcacaccttgatgtgtggattactaaaa 38092255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 40067627 - 40067555
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||| ||||| |||  ||||||||||||||| || ||||||| |||||||||||  |||||||||    
T  40067627 tttatgaaggtgtattttaacaaaattataactaaaaagtgga-aatcacatcttgaggtgtgagttgctaaaa 40067555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 1e-26; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 43837768 - 43837694
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43837768 tttatgaaggtgtcctttagcaagttataactaaaaagtggataatcacaccttgaggtgtggattgctaaaaga 43837694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 47960373 - 47960290
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||| |||||||||||| | ||||||    
T  47960373 tttatgaaggtgtcttttagcaagttataactaaaaaatggataatctcaccttgaggtgtgaattgctaaaagacactttcat 47960290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 53773764 - 53773689
Alignment:
Q  1118 tttatgaaggtgtctttt-agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  53773764 tttatgatggtgtctttttagcaagttataactaaaaagttgataatcacaccttgaagtgttgattgctaaaaga 53773689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1118 - 1166
Target Start/End: Original strand, 26889493 - 26889541
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcac 1166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26889493 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcac 26889541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1121 - 1192
Target Start/End: Complemental strand, 34041267 - 34041196
Alignment:
Q  1121 atgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  34041267 atgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaacttgaggtgtgggttgctaaaaga 34041196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 42434307 - 42434224
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||| | ||||||    
T  42434307 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggaatgctaaaagacactttcat 42434224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 7645991 - 7645886
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| ||||||  |||| |||    
T  7645991 tatatatatatg-gttttgcttgaagacaccttttatgaaggtatcttttagcaaagttataactaaaaag-tgaaaatcacaccttgagccgtgggttg 7645894  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  7645893 ctaaaaga 7645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 34728298 - 34728224
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  34728298 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 34728224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 42560235 - 42560130
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1185  Q
    ||||||||| || ||||| |||||| ||||  ||||||||| ||| ||||| ||||||||||||||||||| ||||||||||  || || ||||||||||    
T  42560235 tatatatatatg-gttttactagaacacacattttatgaagatgtattttaacaagttataactaaaaagtggataatcacactttaagctgtggattgc 42560137  T
Q  1186 taaaaga 1192  Q
    |||||||    
T  42560136 taaaaga 42560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1118 - 1194
Target Start/End: Original strand, 19329441 - 19329517
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagaga 1194  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||||||    
T  19329441 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaagaga 19329517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1084 - 1145
Target Start/End: Original strand, 20835692 - 20835753
Alignment:
Q  1084 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20835692 tttatatatatatgggttttgctataagacaccttttatgaaggtgtcttttagcaagttat 20835753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 11020426 - 11020352
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  11020426 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaaga 11020352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 27907071 - 27907145
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||  ||||||||||    
T  27907071 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggctgctaaaaga 27907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 32626140 - 32626066
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  32626140 tttatgaagttgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 32626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 32868066 - 32868140
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  32868066 tttatgaaggtgtgttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattactaaaaga 32868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1141
Target Start/End: Original strand, 33117501 - 33117556
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  33117501 tatatatatgtgagttttgctagaagataccttttatgaaggtgtattttagcaag 33117556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 51682637 - 51682563
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  51682637 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 51682563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 51702538 - 51702612
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  51702538 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 51702612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1099 - 1146
Target Start/End: Original strand, 54158117 - 54158164
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttata 1146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  54158117 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttata 54158164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1120 - 1190
Target Start/End: Original strand, 7603629 - 7603699
Alignment:
Q  1120 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||| ||||  ||||||||||    
T  7603629 tatgaagatgtcttttagcaatttataactaaaaagtttataatcacaccttgatgtgtaaattgctaaaa 7603699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 34728379 - 34728333
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34728379 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 34728333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 5975643 - 5975702
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||  ||||||||||||||||  ||||||||||||||||||||||||||||    
T  5975643 tatatatatatggattttgctagaagacacattttatgaaggtgtcttttagcaagttat 5975702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 6137341 - 6137415
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||  |||||||||||    
T  6137341 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacacattgaggtgtgagttgctaaaaga 6137415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1188
Target Start/End: Complemental strand, 6944638 - 6944568
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1188  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||| ||||||| ||||||||    
T  6944638 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttaaggtgtgaattgctaa 6944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 32090135 - 32090076
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||| | ||||||||||||||||||||||||||||    
T  32090135 tatatatatataggttttgctagaagacatcttttatgaaggtgtcttttagcaagttat 32090076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 38427241 - 38427182
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  38427241 tatatatatatatgttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 38427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 40875293 - 40875367
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| | ||| |||||||| |||||||||||    
T  40875293 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcaaaccttaaggtgtgggttgctaaaaga 40875367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 52344575 - 52344650
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| ||||||||||||||||| |||| |||||||| ||| ||| || |||||||||||| |||||||||||    
T  52344575 tttatgaatgtgtcttttagcaagtttataattaaaaagtggatgatctcaccttgaggtgtgggttgctaaaaga 52344650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 849315 - 849241
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||| ||||||||||||||||||||||||||||||||||   |||| ||| ||||| |||| | |||||||||||    
T  849315 tttaggaaggtgtcttttagcaagttataactaaaaagtgagtaattacatcttgaagtgtaggttgctaaaaga 849241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 6137260 - 6137306
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  6137260 gttttgctagaagacaccttttatgaatgtgtcttttagcaagttat 6137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 43837849 - 43837803
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  43837849 gttttgctagaagacaccttttatgaaggtgtcgtttagcaagttat 43837803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 48860882 - 48860836
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  48860882 gttttgctagaagacaccttttataaaggtgtcttttagcaagttat 48860836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Original strand, 20503514 - 20503586
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||| ||||||| |||| |||||||||    
T  20503514 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgggttgctaaaa 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Complemental strand, 38963400 - 38963355
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  38963400 ttttgctagaagacaccttttatgaatgtgtcttttagcaagttat 38963355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1118 - 1201
Target Start/End: Complemental strand, 32090041 - 32089958
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    |||||||| |||||||||| ||| |||||||||||||||| || ||||||| || ||||||||| ||||||||||| || |||||    
T  32090041 tttatgaatgtgtcttttaacaaagttataactaaaaagt-gaaaatcacacctcgaggtgtgggttgctaaaagacatcttcat 32089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 13387065 - 13387139
Alignment:
Q  1118 tttatgaaggtgtcttttagca-agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||| |||||||||||||| | ||| ||||||| |||||||||||  ||| |||||||    
T  13387065 tttatgaaggtgtcttttagcatagttataactaaaatg-tgaaaatcacaccttgaggtgtgtgttgttaaaaga 13387139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 20835788 - 20835862
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||| |||||||||||||||||| |||||||||||||| | || ||||||  |||||||||||| |||||||||||    
T  20835788 tttacgaaggtgtcttttagcaaagttataactaaaaaatgga-aatcaccccttgaggtgtgggttgctaaaaga 20835862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 28589315 - 28589241
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||| ||| ||||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||| |||||||    
T  28589315 tttatgaagatgttttttagcaaagttataactaaaaag-tgaaaatcacaccttgaggtatggattgttaaaaga 28589241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1097 - 1144
Target Start/End: Complemental strand, 34041353 - 34041306
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1144  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||    
T  34041353 gagttttgctagaagacacattttatgaatgtgtcttttagcaagtta 34041306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1180
Target Start/End: Complemental strand, 38427147 - 38427085
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtgg 1180  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||||||||    
T  38427147 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttaaggtgtgg 38427085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 40479928 - 40480002
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| ||||||| |||  |||||||||||    
T  40479928 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgagttgctaaaaga 40480002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1106 - 1145
Target Start/End: Complemental strand, 47960447 - 47960408
Alignment:
Q  1106 tagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47960447 tagaagacaccttttatgaaggtgtcttttagcaagttat 47960408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 51682731 - 51682672
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| |  |||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  51682731 tatatatatataggttttgctagaaaacaccttttatgaaggtgttttttagcaagttat 51682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 13386984 - 13387030
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||    
T  13386984 gttttgctagaagacacattttataaaggtgtcttttagcaagttat 13387030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 22254223 - 22254269
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||    
T  22254223 gttttgctagaagacattttttatgaaggtgtcttttagcaagttat 22254269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 51702457 - 51702503
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  51702457 gttttgctagaagacacctcttatgaaagtgtcttttagcaagttat 51702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1118 - 1182
Target Start/End: Complemental strand, 16467235 - 16467171
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggat 1182  Q
    ||||||||||| ||||||| ||| |||||||||||||||| || ||||||| ||||||||||||||    
T  16467235 tttatgaaggtatcttttaacaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggat 16467171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1109 - 1145
Target Start/End: Complemental strand, 32626211 - 32626175
Alignment:
Q  1109 aagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32626211 aagacaccttttatgaaggtgtcttttagcaagttat 32626175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1156
Target Start/End: Original strand, 5975737 - 5975776
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1156  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5975737 tttatgaaggtgtcttttagcaaagttataactaaaaagt 5975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 13372453 - 13372527
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||| | |||||||||| | ||| |||||||    
T  13372453 tttatgaaggtgtcttttagcaaagttataacaaaaaagtgga-aatcataccttgaggtgtaggttgttaaaaga 13372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 13382654 - 13382728
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||| | |||||||||| | ||| |||||||    
T  13382654 tttatgaaggtgtcttttagcaaagttataacaaaaaagtgga-aatcataccttgaggtgtaggttgttaaaaga 13382728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Complemental strand, 26335812 - 26335745
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  26335812 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 26335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 52437566 - 52437633
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  52437566 gaaggtgtgttttagcaagttataactaaaaagtggttaaatacaccttaaggtgtagtttgctaaaa 52437633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 11020507 - 11020461
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| || |||||||| ||||||||||||| ||||||||||||||    
T  11020507 gttttgttaaaagacaccttttatgaaggtgtgttttagcaagttat 11020461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1132 - 1178
Target Start/End: Complemental strand, 17181181 - 17181135
Alignment:
Q  1132 ttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1178  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||    
T  17181181 ttttagcaagttataactaaaaagttaataaatacaacttaaggtgt 17181135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1141
Target Start/End: Original strand, 20503433 - 20503475
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||    
T  20503433 gttttgctagaaggcaccttttatgaaggtgttttttagcaag 20503475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 42434388 - 42434342
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||    
T  42434388 gttttgttagaagacaccttttaggaaggtgttttttagcaagttat 42434342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1156
Target Start/End: Complemental strand, 50678018 - 50677980
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  50678018 tttattaaggtgtgttttagcaagttataactaaaaagt 50677980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1086 - 1140
Target Start/End: Original strand, 53773645 - 53773699
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaa 1140  Q
    ||||||||| |  ||||||||| |||||||||||  |||||||||||||||||||    
T  53773645 tatatatatataggttttgctaaaagacacccttcgtgaaggtgtcttttagcaa 53773699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 4712728 - 4712695
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  4712728 gaaggtgtgttttagcaagttataactaaaaagt 4712695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1086 - 1142
Target Start/End: Complemental strand, 13388060 - 13388006
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagt 1142  Q
    ||||||||| || |||||||||||||||| | ||||  |||||||||||||||||||    
T  13388060 tatatatatatgggttttgctagaagacatcattta--aaggtgtcttttagcaagt 13388006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-25; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1100 - 1192
Target Start/End: Complemental strand, 2752749 - 2752657
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||    
T  2752749 ttttgctagaaaacaccttttatgaggctgtcttttagcaagttataactaaaaaactgataattacaccttgaggtgtggattgctaaaaga 2752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 1469802 - 1469696
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||| || ||||||| |||||||||||| |||    
T  1469802 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagaaaagctataactaaaaagtgga-aatcacaccttgaggtgtgggttg 1469704  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  1469703 ctaaaaga 1469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 17168237 - 17168311
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||    
T  17168237 tttatgaaggtgtcttttagcaagttataactaaaaaattgataatcacattttgaggtgtggattgttaaaaga 17168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1086 - 1201
Target Start/End: Complemental strand, 26284613 - 26284499
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || ||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  26284613 tatatatatatg-gttttgcaagaagacacctttcatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttgaggtgtggattg 26284516  T
Q  1185 ctaaaagagattttcat 1201  Q
     ||||||| || |||||    
T  26284515 ttaaaagacatcttcat 26284499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Original strand, 9005416 - 9005475
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9005416 tatatatatatgaattttgctagaagacaccttttatgaaggtgtcttttagcaagttat 9005475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 8549637 - 8549565
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  8549637 tttatgaaggtgttttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaa 8549565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1124 - 1192
Target Start/End: Complemental strand, 38509713 - 38509645
Alignment:
Q  1124 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| || |||||||||||||||| ||||||||||  ||||||||| |||||||||||||    
T  38509713 aaggtgtcttttatcatgttataactaaaaagtggataatcacacattgaggtgtagattgctaaaaga 38509645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 1627750 - 1627676
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||| || ||||||||    
T  1627750 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttactaaaaga 1627676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 24992940 - 24992866
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  24992940 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 24992866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Original strand, 26842799 - 26842904
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || ||||||||| |||||||  |||||||| |||||||||||| |||||||||||||||| | || |||||||  ||||||||||| |||    
T  26842799 tatatatatatg-gttttgctataagacacattttatgaaagtgtcttttagcaaagttataactaaaaaatgga-aatcacacattgaggtgtgggttg 26842896  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  26842897 ctaaaaga 26842904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 43939527 - 43939453
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| |||  ||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  43939527 tttatgaaggtgtcttttaacaaaattataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaaga 43939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 49660369 - 49660443
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||  |||||||||||    
T  49660369 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaacttgaggtgtgagttgctaaaaga 49660443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 1838736 - 1838661
Alignment:
Q  1118 tttatgaaggtgtcttttagc--aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||  |||||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  1838736 tttatgaaggtgtcttttagcaaaagttataactaaaaagtgga-aatcacacattgaggtgtgggttgctaaaaga 1838661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 2965030 - 2964972
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  2965030 tatatatatatg-gttttgctagaagacaccgtttatgaaggtgtcttctagcaagttat 2964972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1094 - 1145
Target Start/End: Original strand, 9679712 - 9679763
Alignment:
Q  1094 tgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  9679712 tgtgggttttgctagaagacatcctttttgaaggtgtcttttagcaagttat 9679763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 25825454 - 25825408
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25825454 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttat 25825408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 44720066 - 44720112
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  44720066 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttat 44720112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 14463321 - 14463366
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  14463321 ttttgctagaagacaccttttatgaaggtgttttttagcaagttat 14463366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1139 - 1192
Target Start/End: Complemental strand, 48875159 - 48875107
Alignment:
Q  1139 aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  48875159 aagttataactaaaaagtaga-aatcacaacttgaggtgtgggttgctaaaaga 48875107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1084 - 1192
Target Start/End: Original strand, 22675114 - 22675221
Alignment:
Q  1084 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggatt 1183  Q
    ||||||||| | ||| ||||||||||||||||| |||||  | ||||||||  | ||||||||||||||||   |||||||||| ||||||| |||| ||    
T  22675114 tttatatatgtatgaattttgctagaagacaccttttatagaagtgtctttatgtaagttataactaaaaa-aggataatcacaccttgaggcgtggctt 22675212  T
Q  1184 gctaaaaga 1192  Q
     ||||||||    
T  22675213 actaaaaga 22675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1097 - 1145
Target Start/End: Complemental strand, 26213857 - 26213809
Alignment:
Q  1097 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||    
T  26213857 gagttttgctagaagacacattttacgaaggtgtcttttagcaagttat 26213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Complemental strand, 1627831 - 1627784
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  1627831 agttttgctagaagacaccttttataaagatgtcttttagcaagttat 1627784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 1838830 - 1838771
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||||||||| ||||||||||  |||||||| ||||||||||| |||||||    
T  1838830 tatatatatatgagttttgttagaagacacattttatgaaagtgtcttttagtaagttat 1838771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 2964937 - 2964863
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||| |||||  ||||||||||||||| || ||| ||| |||||| |||||||||||||||||    
T  2964937 tttatgaaggtgtctttaagcaaaattataactaaaaagtgga-aatgacaccttgagatgtggattgctaaaaga 2964863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1127 - 1201
Target Start/End: Original strand, 9005517 - 9005591
Alignment:
Q  1127 gtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||  ||||||||||||||| || ||||||| ||||||||| |||||||||||||| || |||||    
T  9005517 gtgtcttttagcaaaattataactaaaaagt-gaaaatcacaccttgaggtgcggattgctaaaagacatattcat 9005591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 25825373 - 25825299
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||| ||||| |||| ||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  25825373 tttatggaggtgcctttcagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 25825299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 30414177 - 30414103
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||| | || ||| ||| |||||| ||||| |||||||||||    
T  30414177 tttatgaaggtgtcttttagcaaagttataactaaaaaatgga-aataacaccttgagatgtgggttgctaaaaga 30414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 42470582 - 42470656
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||| || ||||||| ||| |||||||||||||||| || ||||||| ||||||||||| ||||||||||||    
T  42470582 tttatgaatgtatcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgaattgctaaaaga 42470656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 1406710 - 1406756
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||    
T  1406710 gttttgctagaagacacattttatgaaggtgtcttttagcaaattat 1406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1120 - 1201
Target Start/End: Original strand, 4105587 - 4105668
Alignment:
Q  1120 tatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1201  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||  || |||| || |||||||||||| | ||||||    
T  4105587 tatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacacattaaggtatgaattgctaaaagacactttcat 4105668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1118 - 1187
Target Start/End: Complemental strand, 10769844 - 10769775
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgcta 1187  Q
    |||||||||||| |||||| | |||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  10769844 tttatgaaggtgccttttatccaagttataactaaaaagtgga-aatcacaccttcaggtgtggattgcta 10769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 30414258 - 30414212
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  30414258 gttttgctagaatacaccttttatgaaggtgttttttagcaagttat 30414212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 17168157 - 17168202
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||    
T  17168157 ttttgctagaagacaccaattatgaaggtgtcttttaacaagttat 17168202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Complemental strand, 30819668 - 30819623
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  30819668 ttttgctagaagacaccttttatgaaggtgttttttagcaaattat 30819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 40460983 - 40461028
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||    
T  40460983 ttttgatagaagacactttttatgaaggtgtcttttagcaagttat 40461028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1118 - 1161
Target Start/End: Original strand, 47921642 - 47921686
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgata 1161  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  47921642 tttatgaaggtgtcttttagcaaagttataactaaaaagtggata 47921686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 158541 - 158608
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  158541 gaaggtgtgttttagcaagttataactaaaaagtagctaaatacaccttaaggtgttgcttgctaaaa 158608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 463439 - 463506
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  463439 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 463506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1156
Target Start/End: Complemental strand, 7336133 - 7336094
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1156  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7336133 tttatgaaggtgtcttttagcaaagttataactaaaaagt 7336094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 13157686 - 13157753
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  13157686 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 13157753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1086 - 1141
Target Start/End: Complemental strand, 17453065 - 17453010
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    ||||||||| || ||||| || ||||||||  ||||||||||||||||||||||||    
T  17453065 tatatatatatgggttttactcgaagacactttttatgaaggtgtcttttagcaag 17453010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1098 - 1145
Target Start/End: Complemental strand, 25671134 - 25671087
Alignment:
Q  1098 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||| ||||||   ||||||||||||||||||||||||||||    
T  25671134 agttttgctaaaagacatattttatgaaggtgtcttttagcaagttat 25671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 27787927 - 27787994
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  27787927 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 27787994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Complemental strand, 33675890 - 33675823
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  33675890 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 33675823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1122 - 1156
Target Start/End: Original strand, 24770755 - 24770789
Alignment:
Q  1122 tgaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    ||||||||| |||||||||||||||||||||||||    
T  24770755 tgaaggtgtgttttagcaagttataactaaaaagt 24770789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1191
Target Start/End: Original strand, 26897335 - 26897407
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaag 1191  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||| ||| |||||||| ||||||||||    
T  26897335 tttatgaagatgttttttagcaaagttataactaaaaagtgga-aatcacaccttaaggtgtgg-ttgctaaaag 26897407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1124 - 1190
Target Start/End: Original strand, 34515258 - 34515324
Alignment:
Q  1124 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  34515258 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 34515324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1132 - 1174
Target Start/End: Original strand, 36630440 - 36630482
Alignment:
Q  1132 ttttagcaagttataactaaaaagttgataatcacaacttgag 1174  Q
    |||||||||||||||| |||||||| |||||||||| ||||||    
T  36630440 ttttagcaagttataattaaaaagtggataatcacatcttgag 36630482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Complemental strand, 38509776 - 38509730
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||||||  ||||||||||||||||||||||| ||||    
T  38509776 gttttgttagaagacacattttatgaaggtgtcttttagcaaattat 38509730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1122 - 1156
Target Start/End: Complemental strand, 41146320 - 41146286
Alignment:
Q  1122 tgaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    ||||||||| |||||||||||||||||||||||||    
T  41146320 tgaaggtgtgttttagcaagttataactaaaaagt 41146286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 49659892 - 49659938
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||| ||||||||||| || |||||||||| ||||||||||||||    
T  49659892 gttttgttagaagacacctttcatgaaggtgttttttagcaagttat 49659938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1122 - 1156
Target Start/End: Original strand, 50559375 - 50559409
Alignment:
Q  1122 tgaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    ||||||||| |||||||||||||||||||||||||    
T  50559375 tgaaggtgtgttttagcaagttataactaaaaagt 50559409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 5226801 - 5226846
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||| |||||||  ||||||||||||||||||| ||||||||    
T  5226801 ttttgctaaaagacacattttatgaaggtgtcttttaacaagttat 5226846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 5491728 - 5491761
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  5491728 gaaggtgtgttttagcaagttataactaaaaagt 5491761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1099 - 1140
Target Start/End: Complemental strand, 7336214 - 7336173
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaa 1140  Q
    |||||||||||||||||  ||||| |||||||||||||||||    
T  7336214 gttttgctagaagacacattttattaaggtgtcttttagcaa 7336173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 13264600 - 13264567
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  13264600 gaaggtgtgttttagcaagttataactaaaaagt 13264567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 16005633 - 16005600
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  16005633 gaaggtgtgttttagcaagttataactaaaaagt 16005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Original strand, 26843124 - 26843157
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  26843124 gaaggtgtgttttagcaagttataactaaaaagt 26843157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 42199922 - 42199889
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  42199922 gaaggtgtattttagcaagttataactaaaaagt 42199889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 42208790 - 42208757
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  42208790 gaaggtgtattttagcaagttataactaaaaagt 42208757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 47921562 - 47921607
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||| || ||||||||||||| ||||| ||||||||    
T  47921562 ttttgctagaagacgccttttatgaaggtgttttttaacaagttat 47921607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 4e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Complemental strand, 8634 - 8529
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1184  Q
    ||||||||| || ||||||||||||||| || ||||||||| ||||||||| | |||||||||||||||||| || ||||||| ||| ||||||||||||    
T  8634 tatatatatatg-gttttgctagaagacgccttttatgaagttgtcttttaacaaagttataactaaaaagtgga-aatcacaccttcaggtgtggattg 8537  T
Q  1185 ctaaaaga 1192  Q
    ||||||||    
T  8536 ctaaaaga 8529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1086 - 1192
Target Start/End: Original strand, 19143617 - 19143721
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1185  Q
    ||||||||| |  |||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| || ||||||| |||||||| |||||| |    
T  19143617 tatatatatataggttttgctagaagataccttttatgaaggtgtcttttagcaa-atataactaaaaagtgga-aatcacaccttgaggtatggatttc 19143714  T
Q  1186 taaaaga 1192  Q
    |||||||    
T  19143715 taaaaga 19143721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1105 - 1190
Target Start/End: Complemental strand, 22423986 - 22423901
Alignment:
Q  1105 ctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||||||  |||||||| ||||  ||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||    
T  22423986 ctagaagacactttttatgaatgtgttctttagcaagttataattaaaaagttgataatcacacgttgaagtgtggattgctaaaa 22423901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 12159523 - 12159449
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  12159523 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 12159449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1119 - 1192
Target Start/End: Original strand, 15081203 - 15081276
Alignment:
Q  1119 ttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  15081203 ttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 15081276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Complemental strand, 29427304 - 29427237
Alignment:
Q  1123 gaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  29427304 gaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaa 29427237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 6322571 - 6322645
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||| |||||||||||||||||| || || |||| ||| ||||||||||||||||||||    
T  6322571 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aaccacaccttaaggtgtggattgctaaaaga 6322645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1099 - 1192
Target Start/End: Original strand, 28295551 - 28295647
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtctttt----agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||| | ||||||||||||||||||    |  |||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||    
T  28295551 gttttgctagaagacatcttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggata-tcacaccttgaggtgtggcttgctaaaaga 28295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1099 - 1192
Target Start/End: Complemental strand, 28516522 - 28516426
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtctttt----agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||| | ||||||||||||||||||    |  |||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||    
T  28516522 gttttgctagaagacatcttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggata-tcacaccttgaggtgtggcttgctaaaaga 28516426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1101 - 1145
Target Start/End: Complemental strand, 17347200 - 17347156
Alignment:
Q  1101 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  17347200 tttgctagaagacacattttatgaaggtgtcttttagcaagttat 17347156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 10075074 - 10075148
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||| ||| ||||||| |||||||| || ||||||| |||||||||||  |||||||||||    
T  10075074 tttatgaaggtgtcttttaacaaagttataattaaaaagtgga-aatcacaccttgaggtgtgagttgctaaaaga 10075148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 12159623 - 12159558
Alignment:
Q  1086 tatatatatgtgagttttgctagaag------acaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| ||||||||||||||||      ||||| ||||||||||||||||||||||||||||    
T  12159623 tatatatatatgagttttgctagaagtcgaagacaccttttatgaaggtgtcttttagcaagttat 12159558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 14975480 - 14975407
Alignment:
Q  1118 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||||| |||||||| ||||| ||| ||||| | ||| |||||||| |||||||||||    
T  14975480 tttatgaaggtgttttttagcaaattataact-aaaaggtgaaaatcataccttaaggtgtgggttgctaaaaga 14975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 18096331 - 18096377
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  18096331 gttttgctagaagacatcttttgtgaaggtgtcttttagcaagttat 18096377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1100 - 1145
Target Start/End: Original strand, 10074994 - 10075039
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||    
T  10074994 ttttgctagaagacaccttttatgaaagtgtcttttaacaagttat 10075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1118 - 1190
Target Start/End: Complemental strand, 17347121 - 17347049
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||| ||||||||||| |||||||||||||||||| || ||||||| ||| | || |||||||||||||    
T  17347121 tttatgaagatgtcttttagcaaagttataactaaaaagtgga-aatcacaccttaaagtatggattgctaaaa 17347049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1140 - 1192
Target Start/End: Original strand, 18096429 - 18096480
Alignment:
Q  1140 agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  18096429 agttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 18096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1140 - 1192
Target Start/End: Original strand, 18102549 - 18102600
Alignment:
Q  1140 agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  18102549 agttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 18102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1118 - 1188
Target Start/End: Original strand, 9533450 - 9533519
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1188  Q
    ||||||||||||||||||| ||| ||||||| ||||| || || ||||||| ||||||||||||||||||||    
T  9533450 tttatgaaggtgtcttttaacaaagttataattaaaa-gtgga-aatcacaccttgaggtgtggattgctaa 9533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1132 - 1162
Target Start/End: Complemental strand, 9406786 - 9406756
Alignment:
Q  1132 ttttagcaagttataactaaaaagttgataa 1162  Q
    |||||||||||||||||||||||||||||||    
T  9406786 ttttagcaagttataactaaaaagttgataa 9406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 9891373 - 9891419
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  9891373 gttttgctagaagataccttttataaaggtgtcttttagcaaattat 9891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 14488364 - 14488331
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  14488364 gaaggtgtgttttagcaagttataactaaaaagt 14488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1086 - 1143
Target Start/End: Complemental strand, 30416552 - 30416495
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1143  Q
    ||||||||| | ||||||||||||||| || |||||||||||||  ||||| ||||||    
T  30416552 tatatatatatcagttttgctagaagatactctttatgaaggtgctttttaacaagtt 30416495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 33730587 - 33730554
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  33730587 gaaggtgtgttttagcaagttataactaaaaagt 33730554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1118 - 1189
Target Start/End: Original strand, 35135 - 35206
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1189  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||    
T  35135 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaa 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 35054 - 35100
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  35054 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 35100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 9e-18; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Complemental strand, 94884 - 94810
Alignment:
Q  1118 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  94884 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 94810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1100 - 1141
Target Start/End: Complemental strand, 95092 - 95051
Alignment:
Q  1100 ttttgctagaagacaccctttatgaaggtgtcttttagcaag 1141  Q
    ||||||||||||||||| |||| ||| |||||||||||||||    
T  95092 ttttgctagaagacaccttttaagaatgtgtcttttagcaag 95051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1104 - 1145
Target Start/End: Original strand, 478315 - 478356
Alignment:
Q  1104 gctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||  ||||||||||||| ||||||||||||||    
T  478315 gctagaagacactttttatgaaggtgttttttagcaagttat 478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 9232 - 9306
Alignment:
Q  1118 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||||||| ||||||||||||||||| ||||||    
T  9232 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtggattgcgaaaaga 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1102 - 1145
Target Start/End: Original strand, 9155 - 9198
Alignment:
Q  1102 ttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  9155 ttgctagaagacaccttttatgaaggtgtattttagcaagttat 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1099 - 1145
Target Start/End: Original strand, 392406 - 392452
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  392406 gttttgctagaagacaccttttatgaagatgtcttttagcaagttat 392452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1119 - 1192
Target Start/End: Original strand, 392488 - 392561
Alignment:
Q  1119 ttatgaaggtgtcttttagcaagt-tataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    |||||||||||||||||||||| | |||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  392488 ttatgaaggtgtcttttagcaaatgtataactaaaaagtgga-aatcacaccttaaggtgtgggttgctaaaaga 392561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1099 - 1190
Target Start/End: Original strand, 74985 - 75076
Alignment:
Q  1099 gttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    ||||||||||||||| |  ||||| ||||||||||||||  |||||||||||||||||| || ||||||| |||| ||| ||| |||||||||    
T  74985 gttttgctagaagacgctttttattaaggtgtcttttagtaaagttataactaaaaagtgga-aatcacaccttggggtatgggttgctaaaa 75076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1118 - 1192
Target Start/End: Original strand, 17867 - 17941
Alignment:
Q  1118 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1192  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| ||||||| |||  |||||||||||    
T  17867 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgagttgctaaaaga 17941  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1096 - 1145
Target Start/End: Original strand, 49818 - 49867
Alignment:
Q  1096 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||| |||| |||||||| || ||||||||||||||||    
T  49818 tgagttttgctagaagccaccttttatgaatgtatcttttagcaagttat 49867  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1101 - 1145
Target Start/End: Original strand, 77027 - 77071
Alignment:
Q  1101 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  77027 tttgctagaagacactatttatgaaggtgttttttagcaagttat 77071  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1123 - 1190
Target Start/End: Original strand, 9860 - 9927
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1190  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  9860 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 9927  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1086 - 1145
Target Start/End: Complemental strand, 231297 - 231239
Alignment:
Q  1086 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1145  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  231297 tatatatatatg-gttttgctagaagacacattttatgaaggtgtcttttaacaaattat 231239  T

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Target: scaffold0325 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1123 - 1156
Target Start/End: Complemental strand, 6608 - 6575
Alignment:
Q  1123 gaaggtgtcttttagcaagttataactaaaaagt 1156  Q
    |||||||| |||||||||||||||||||||||||    
T  6608 gaaggtgtattttagcaagttataactaaaaagt 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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