View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2876_low_15 (Length: 226)

Name: NF2876_low_15
Description: NF2876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2876_low_15
NF2876_low_15
[»] chr4 (8 HSPs)
chr4 (7-226)||(26187682-26187901)
chr4 (29-164)||(13520868-13521005)
chr4 (30-209)||(3992653-3992836)
chr4 (30-165)||(7899838-7899971)
chr4 (30-213)||(39320591-39320768)
chr4 (104-209)||(41817816-41817922)
chr4 (104-177)||(34561471-34561544)
chr4 (31-114)||(31297409-31297493)
[»] chr5 (13 HSPs)
chr5 (30-177)||(562530-562677)
chr5 (30-177)||(557758-557907)
chr5 (30-165)||(12044014-12044152)
chr5 (30-174)||(42002498-42002645)
chr5 (30-177)||(36941147-36941296)
chr5 (30-209)||(21322921-21323104)
chr5 (29-177)||(32460426-32460577)
chr5 (30-162)||(41997719-41997854)
chr5 (67-209)||(13300406-13300553)
chr5 (29-209)||(3666905-3667084)
chr5 (30-112)||(36936393-36936476)
chr5 (30-177)||(31732615-31732760)
chr5 (133-177)||(23976422-23976466)
[»] scaffold0182 (1 HSPs)
scaffold0182 (30-177)||(8764-8914)
[»] chr8 (8 HSPs)
chr8 (30-177)||(31448747-31448897)
chr8 (30-177)||(4237224-4237373)
chr8 (30-177)||(4241963-4242112)
chr8 (104-177)||(8330335-8330408)
chr8 (29-100)||(42973235-42973306)
chr8 (42-177)||(43301638-43301776)
chr8 (104-176)||(25361679-25361750)
chr8 (133-177)||(37772780-37772824)
[»] chr3 (8 HSPs)
chr3 (30-177)||(8888978-8889128)
chr3 (30-177)||(8070741-8070888)
chr3 (30-177)||(3673628-3673777)
chr3 (30-177)||(3693682-3693831)
chr3 (30-177)||(3034706-3034855)
chr3 (30-177)||(8884232-8884382)
chr3 (67-177)||(10585102-10585211)
chr3 (30-62)||(28126365-28126397)
[»] chr2 (6 HSPs)
chr2 (30-177)||(10159601-10159749)
chr2 (30-177)||(6296796-6296942)
chr2 (104-177)||(28856150-28856223)
chr2 (147-209)||(17452512-17452573)
chr2 (30-79)||(35602754-35602804)
chr2 (30-114)||(30659283-30659368)
[»] scaffold0008 (1 HSPs)
scaffold0008 (33-175)||(257703-257844)
[»] chr7 (9 HSPs)
chr7 (29-164)||(9649843-9649980)
chr7 (29-209)||(27257246-27257430)
chr7 (31-114)||(10531748-10531831)
chr7 (30-114)||(13343311-13343395)
chr7 (39-177)||(23866787-23866924)
chr7 (30-177)||(10499011-10499158)
chr7 (30-177)||(10504040-10504187)
chr7 (36-114)||(13346253-13346331)
chr7 (32-146)||(1044346-1044462)
[»] scaffold0628 (1 HSPs)
scaffold0628 (30-147)||(5760-5877)
[»] chr1 (5 HSPs)
chr1 (30-176)||(3095152-3095300)
chr1 (30-91)||(8273059-8273120)
chr1 (104-205)||(33055812-33055918)
chr1 (29-127)||(14204446-14204546)
chr1 (104-176)||(40232345-40232418)
[»] scaffold0041 (1 HSPs)
scaffold0041 (30-209)||(34605-34788)
[»] scaffold0070 (2 HSPs)
scaffold0070 (30-177)||(59472-59617)
scaffold0070 (30-177)||(63674-63819)
[»] scaffold0484 (1 HSPs)
scaffold0484 (104-176)||(7980-8051)
[»] scaffold0060 (1 HSPs)
scaffold0060 (30-209)||(51796-51979)
[»] chr6 (6 HSPs)
chr6 (30-114)||(2862426-2862510)
chr6 (30-76)||(24588522-24588568)
chr6 (30-76)||(28963740-28963786)
chr6 (140-209)||(15645702-15645771)
chr6 (30-114)||(2881729-2881813)
chr6 (30-62)||(2886402-2886434)
[»] scaffold0061 (1 HSPs)
scaffold0061 (84-159)||(48895-48970)
[»] scaffold0017 (1 HSPs)
scaffold0017 (84-159)||(149664-149739)
[»] scaffold0131 (1 HSPs)
scaffold0131 (30-75)||(8718-8763)


Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 26187682 - 26187901
Alignment:
Q  7 gaatgagatttaggaagagtggatgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26187682 gaatgagatttaggaagagtggatgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtcagaa 26187781  T
Q  107 ttgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26187782 ttgaaaaatgtgaaattcccacatgagatggatcacacactagtagtatttatatagtggggttgtacctcaaatgggatgcataattaagtgaacgaag 26187881  T
Q  207 taaacacgaaaatgttaaat 226  Q
    ||| ||||||||||||||||    
T  26187882 taagcacgaaaatgttaaat 26187901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 13520868 - 13521005
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  13520868 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 13520967  T
Q  129 atgagatgga--tcacacactagtggtgtttatatagt 164  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  13520968 atcggatgaaatacacacattagtagtgtttatatagt 13521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 3992653 - 3992836
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| || ||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  3992653 tgttggaacatatgcggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaggtggaagtcccaca 3992751  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  3992752 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 3992836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 7899838 - 7899971
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  7899838 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaagtggaagtcccaca 7899936  T
Q  130 tgagatggatcacacactagtggtgtttatatagtg 165  Q
    | | |||||||||||| |||| ||||||||||||||    
T  7899937 tca-atggatcacacattagtagtgtttatatagtg 7899971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 39320768 - 39320591
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||||||||||||||||||||||||| |  | |||||||| || || ||| |||| ||||       ||||||||||| ||| || | | |||    
T  39320768 tgttggaacatgtgtggaaattgagttaaaagattaaatacaaattcgcatgttgggtagaactagt-------gaattgaaaaaagtggaagttctaca 39320676  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaaacac 213  Q
    |  ||| ||||||||| ||||  ||||||||||||| || |||||||| |||  ||   |||||||| |||||||||||||||||    
T  39320675 ttggatagatcacacattagtaatgtttatatagtgggggtgtacctctaatatgggcacataattatgtgaacgaagtaaacac 39320591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 41817922 - 41817816
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaac 202  Q
    ||||||||||| ||| || | ||||||  ||||||||||| | |||| |||||||||||||| || |||| ||| ||| ||| | |||||||| ||||||    
T  41817922 gaattgaaaaaagtggaagttccacatcggatggatcacatattagtagtgtttatatagtgggggtgtatctctaataggggtacataattatgtgaac 41817823  T
Q  203 gaagtaa 209  Q
    |||||||    
T  41817822 gaagtaa 41817816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 34561544 - 34561471
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||||||||||| ||| || |||||| |  ||||||||||||| |||| || ||||||||||| || ||||||||    
T  34561544 gaattgaaaaaagtggaagtcccacgtcggatggatcacacattagtagtatttatatagtgggggtgtacctc 34561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 31297409 - 31297493
Alignment:
Q  31 gttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    |||| |||||| ||||||||||||| |||| | ||  ||||||||||||| || ||| |||| |||||||||  |||||||||||    
T  31297409 gttggaacatgcgtggaaattgagtaaaaaaggctaaacacaaattctcatgttgggtagaactagtgttgtgtgaattgaaaaa 31297493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 562677 - 562530
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  562677 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 562579  T
Q  129 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  562578 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 562530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 557907 - 557758
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  557907 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 557809  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  557808 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 557758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 12044014 - 12044152
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| |||||| |||| |    
T  12044014 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtgaaagtccctc 12044113  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtg 165  Q
    ||  |||||| |||||||  |||| ||||||||||||||    
T  12044114 atcggatggaacacacacattagtagtgtttatatagtg 12044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 42002645 - 42002498
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||||  | || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  42002645 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcatatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 42002546  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtac 174  Q
    ||  |||||| |||||||  |||| ||||||||||| ||||| |||||    
T  42002545 atcggatggaacacacacattagtagtgtttatatattgagggtgtac 42002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 36941147 - 36941296
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| ||||||| |  ||||||||||| ||| || ||||||    
T  36941147 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttctgtgaattgaaaaa-gtggaagtcccac 36941245  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  36941246 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 36941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 21322921 - 21323104
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  21322921 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 21323019  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    |  ||||||||||||| |||| |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  21323020 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 21323104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 32460426 - 32460577
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccca 127  Q
    |||||| ||||||||| ||||||||||| ||||||||   ||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | |||    
T  32460426 atgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtacca 32460525  T
Q  128 catgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    |||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  32460526 catcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 32460577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 41997854 - 41997719
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||| |||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  41997854 tgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 41997755  T
Q  129 atgagatggatcacacac--tagtggtgtttatata 162  Q
    ||  |||||| |||||||  |||| |||||||||||    
T  41997754 atcggatggaacacacacattagtagtgtttatata 41997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 13300406 - 13300553
Alignment:
Q  67 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 166  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||     
T  13300406 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatagtgg 13300505  T
Q  167 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  13300506 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 13300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 209
Target Start/End: Complemental strand, 3667084 - 3666905
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||| ||| || | | |||| |||||||||   |||||||||| ||| || ||||||    
T  3667084 atgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattttcatgttgtgtagaaatagtgttgtgtaaattgaaaaaggtggaagtcccac 3666985  T
Q  129 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaacgaagtaa 209  Q
    ||  |||||| ||  || |||| |||||  ||||||| || |||||||| ||| ||| | |||||||| |||||||| ||||    
T  3666984 atcggatggaacaagcattagtagtgtt--tatagtgggggtgtacctctaataggggtacataattatgtgaacgatgtaa 3666905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 36936393 - 36936476
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaa 112  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  |||||||||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaa 36936476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 31732760 - 31732615
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||  |||| |||||| ||  |||||||||||  || || |||||||    
T  31732760 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatggatagaactagtgtagtgtgaattgaaaaaaatggaagtcccaca 31732662  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  31732661 tc-gatggatcacacattagtagtgtttatatagtgggggtgtacctc 31732615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 23976422 - 23976466
Alignment:
Q  133 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||||||||||||| ||||  |||||||||||||||| ||||||||    
T  23976422 gatggatcacacattagtaatgtttatatagtgagggtgtacctc 23976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 8764 - 8914
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaaatcccac 8863  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8864 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 31448747 - 31448897
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 31448846  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  31448847 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 31448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 4237224 - 4237373
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4237224 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4237322  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4237323 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4237373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 4241963 - 4242112
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  4241963 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 4242061  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  4242062 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 4242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 8330335 - 8330408
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| |||| |||||||||||||  || ||||||||    
T  8330335 gaattgaaaaaagtgaaagtcccacatcggatggatcacacattagtagtgtttatatagtaggggtgtacctc 8330408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 42973306 - 42973235
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttg 100  Q
    |||||| ||||||||   |||||||||||||||||| ||||||||||| |||||  | ||||||||||||||    
T  42973306 atgttggaacatgtgcaaaaattgagttaaaagactatacacaaattcccacgttagaaagaattagtgttg 42973235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 177
Target Start/End: Original strand, 43301638 - 43301776
Alignment:
Q  42 tgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatc 140  Q
    ||||||||||||||| ||||||||  |||||||||  ||  | ||| |||| |||||||||  ||||||||||| ||| || ||| ||||  |||||| |    
T  43301638 tgtggaaattgagttaaaaagactaaacacaaatttccatcttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcctacatcggatggaac 43301737  T
Q  141 ac--acactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  ||| |||| |||||||||||||| || ||||||||    
T  43301738 acatacattagtagtgtttatatagtgggggtgtacctc 43301776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 25361679 - 25361750
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 176  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| |||| || ||||||||||| || |||||||    
T  25361679 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtatttatatagtggggatgtacct 25361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 37772824 - 37772780
Alignment:
Q  133 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||    
T  37772824 gatggatcacacattagtagtgtttatatagtgggggtgtacctc 37772780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 8889128 - 8888978
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| ||||||||||||||  ||||||||||| ||| || ||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccac 8889029  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8889028 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8888978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 8070888 - 8070741
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8070888 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaa-tggaagtcccac 8070790  T
Q  129 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||| |||| |||||||||||||| || ||||||||    
T  8070789 atcggatggaacacacattagtagtgtttatatagtgggggtgtacctc 8070741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 3673777 - 3673628
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3673777 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3673679  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3673678 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3673628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 3693831 - 3693682
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  ||||||||||||| || ||| |||| || ||||||  ||||||||||| ||| || ||||||    
T  3693831 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattctcatgttgggtagaactaatgttgtgtgaattgaaaaa-gtggaagtcccac 3693733  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  3693732 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 3693682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 3034855 - 3034706
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3034855 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3034757  T
Q  129 atgagatgga--tcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  ||||||   |||||| |||| |||||||||||||| || ||||||||    
T  3034756 atcggatggaatacacacattagtagtgtttatatagtgggggtgtacctc 3034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 8884382 - 8884232
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||| |||||||||| ||||  |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||    
T  8884382 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaatggaagtcccac 8884283  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||||||  |||| |||||||||||||| || ||||||||    
T  8884282 atcggatggaacacacacattagtagtgtttatatagtgggggtgtacctc 8884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 10585102 - 10585211
Alignment:
Q  67 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 166  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  10585102 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 10585200  T
Q  167 ggttgtacctc 177  Q
    || ||||||||    
T  10585201 gggtgtacctc 10585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 28126397 - 28126365
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaaga 62  Q
    |||||||||||||||| ||||||||||||||||    
T  28126397 tgttgaaacatgtgtgaaaattgagttaaaaga 28126365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 10159601 - 10159749
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaa-gactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| ||||| ||||||||||||||||||| ||||  |||||||||| || ||  || |||| |||||||||  ||||||||||| ||| || ||||||    
T  10159601 tgttggaacatctgtggaaattgagttaaaaagactaaacacaaattcccatgttaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 10159700  T
Q  129 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||  |||||| |||| | |||| |||||||||||||| || ||||||||    
T  10159701 atcggatggaacacatattagtagtgtttatatagtgggggtgtacctc 10159749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 6296796 - 6296942
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| ||  ||||||    
T  6296796 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagacccaca 6296894  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  6296895 tcggatggatcacacattagtagtgtttatatagtgggggtgtacctc 6296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 28856223 - 28856150
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    ||||||||||| ||| || |||||||| |||||||||||||| |||| |||||||||| ||| || ||||||||    
T  28856223 gaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatggtggggatgtacctc 28856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 17452512 - 17452573
Alignment:
Q  147 tagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 209  Q
    |||| |||||||||||||| ||||||||||  || ||||| |||||||| |||||||||||||    
T  17452512 tagtagtgtttatatagtg-ggttgtacctttaaagggatacataattatgtgaacgaagtaa 17452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 35602804 - 35602754
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctca 79  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||    
T  35602804 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattctca 35602754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 30659368 - 30659283
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagtt-aaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    ||||| ||||||||||||||||||||| ||||||||  ||| ||| || || || ||| |||| |||||||||  |||||||||||    
T  30659368 tgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactcccatgttgggtagaactagtgttgtgtgaattgaaaaa 30659283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 257844 - 257703
Alignment:
Q  33 tgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatga 132  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||| | || | | |||| || ||||||  ||||||||||| |||||| || |||| ||    
T  257844 tgaaatatgtgtggaaattgagttaaaagactaaacacaaattcttatgttgagtagaactaatgttgtgtgaattgaaaaaagtgaaagtctcacacga 257745  T
Q  133 gatggatcacacactagtggtgtttatatagtgaggttgtacc 175  Q
     ||| | |||||| ||||  ||||||||||||| |||||||||    
T  257744 -atgaaacacacattagtattgtttatatagtggggttgtacc 257703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 9649843 - 9649980
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||    
T  9649843 atgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccac 9649942  T
Q  129 atgagatgga--tcacacactagtggtgtttatatagt 164  Q
    ||  |||| |   |||||| |||| |||||||||||||    
T  9649943 atcggatgaaatacacacattagtagtgtttatatagt 9649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 209
Target Start/End: Complemental strand, 27257430 - 27257246
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    |||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||    
T  27257430 atgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 27257332  T
Q  129 atgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    || |||||||||||||| |||| |||||||||||||| || |||| ||| |||     ||| | |||||||| |||||||||||||    
T  27257331 atcagatggatcacacattagtagtgtttatatagtgggggtgtatctctaattaatgggggtacataattatgtgaacgaagtaa 27257246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 10531748 - 10531831
Alignment:
Q  31 gttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    |||||||| |||||| ||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||| ||||||||||||    
T  10531748 gttgaaacttgtgtgaaaattgaattaaaagactaaacacaaattttcacgtagggtagaactagttttgtgcgaattgaaaaa 10531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 13343311 - 13343395
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    ||||| |||||||||||||||||| |||||||||   ||||||||| |||||| ||| |||| |||||||||  |||||||||||    
T  13343311 tgttggaacatgtgtggaaattgaattaaaagacaaaacacaaattttcacgttgggtagaactagtgttgtgtgaattgaaaaa 13343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 23866924 - 23866787
Alignment:
Q  39 atgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattga-aaaatgtgaaattcccacatgagatgg 137  Q
    ||||||| ||||||||||||||||||  |||||||||| || || ||| |||| |||||||||  ||||||| |||| ||| || ||||||||  |||||    
T  23866924 atgtgtgaaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaagtggaagtcccacattggatgg 23866825  T
Q  138 atcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  ||||| |||| ||||||||||| || || ||||||||    
T  23866824 a--acacattagtagtgtttatataatgggggtgtacctc 23866787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 10499011 - 10499158
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10499011 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10499110  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10499111 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10499158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 10504040 - 10504187
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| |||||||||||||||||| ||||||||||  ||| |||||   ||||| || |||| |||||||||  ||||||||||| ||| || ||||  |    
T  10504040 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatttcaacgtaaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaa 10504139  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  |||||| |||||| ||||  |||||||||| | ||| ||||||||    
T  10504140 ttggatggaacacacattagtattgtttatataattagggtgtacctc 10504187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 13346253 - 13346331
Alignment:
Q  36 aacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    |||||||||||||||||| |||||||||   ||| ||||| ||||||  || |||| |||||||||  |||||||||||    
T  13346253 aacatgtgtggaaattgaattaaaagacaaaacataaattttcacgtttggtagaactagtgttgtgtgaattgaaaaa 13346331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 1044462 - 1044346
Alignment:
Q  32 ttgaaacatgtgtggaaatt--gagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||||||||||||||||||  |||||||||||||  ||||||  |||||| | |   |||| |||||| ||  ||||||||||| |||||| ||| |||    
T  1044462 ttgaaacatgtgtggaaattgagagttaaaagactaaacacaatgtctcacattgtctagaactagtgtggtgtgaattgaaaaaagtgaaagtcctaca 1044363  T
Q  130 tgagatggatcacacac 146  Q
    |  ||| ||||||||||    
T  1044362 ttggatagatcacacac 1044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 5877 - 5760
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||||||||  |  || |||| |||||||||  |||||||||||  ||||| |||||||    
T  5877 tgttggaacatgtgtggaaattgagttaaaatactaaacacaaattctcatatttggtagaactagtgttgtgtgaattgaaaaaaatgaaagtcccaca 5778  T
Q  130 tgagatggatcacacact 147  Q
    | | ||||| ||||||||    
T  5777 tcaaatggaacacacact 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 3095300 - 3095152
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaa-agactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccac 128  Q
    ||||| |||||||||||||||||||||||| | |||  |||||||||  || || ||| |||| |||||||||  ||||||||||| ||| || ||||||    
T  3095300 tgttggaacatgtgtggaaattgagttaaacaaactaaacacaaatttccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccac 3095202  T
Q  129 atgagatggatcacacac--tagtggtgtttatatagtgaggttgtacct 176  Q
    ||  |||| | |||||||  |||| |||||||||||||| || |||||||    
T  3095201 atcggatgaaacacacacattagtagtgtttatatagtgggggtgtacct 3095152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 8273059 - 8273120
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaa 91  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||| ||||| ||| ||||    
T  8273059 tgttgaaacatgtgtggaaattgagttaaaaaaataaacacaaattcccacgttgggtagaa 8273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 33055918 - 33055812
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagt 198  Q
    |||||||||||  || || ||||||||  ||||||||||||| |||| ||||||||||||||  | |||||||  |||     ||||| |||||||||||    
T  33055918 gaattgaaaaaaatggaagtcccacatcggatggatcacacattagtagtgtttatatagtggaggtgtacctgtaattaatggggatacataattaagt 33055819  T
Q  199 gaacgaa 205  Q
    |||||||    
T  33055818 gaacgaa 33055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 14204446 - 14204546
Alignment:
Q  29 atgttgaaacatgtgtggaaattgagttaaaagacttt--acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattccc 126  Q
    |||||| |||||||||||||||||||| ||||| || |  ||||||||||| | || |||  ||| |||||||||  ||||||||||| ||| || ||||    
T  14204446 atgttggaacatgtgtggaaattgagtaaaaagtctataaacacaaattcttatgttgggtggaactagtgttgtgtgaattgaaaaaagtggaagtccc 14204545  T
Q  127 a 127  Q
    |    
T  14204546 a 14204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 40232345 - 40232418
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacaca-ctagtggtgtttatatagtgaggttgtacct 176  Q
    ||||||||||| ||| || ||||||||  |||||||||||||  |||| |||||||||||||| || |||||||    
T  40232345 gaattgaaaaaagtggaagtcccacatcggatggatcacacatttagtagtgtttatatagtgggggtgtacct 40232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 34605 - 34788
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  34605 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccaca 34703  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    |   |||||||||||| || | |||||||||||||| || |||||||| |||     ||| | |||||||| |||||||||||||    
T  34704 tcgtatggatcacacattaatagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 34788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 59617 - 59472
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  59617 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 59520  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  59519 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 59472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 63819 - 63674
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||||||||||||| ||  ||||  |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||    
T  63819 tgttggaacatatgtggaaattgagt-aattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccaca 63722  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 177  Q
    |  ||||||||||||| ||||  ||||||||||||| || ||||||||    
T  63721 tcggatggatcacacattagtaatgtttatatagtgggggtgtacctc 63674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 8051 - 7980
Alignment:
Q  104 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 176  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| ||||||| ||||||||||| || |||||||    
T  8051 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtggtatttatatagtggggatgtacct 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 51796 - 51979
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccaca 129  Q
    ||||| ||||| |||| ||||||||| ||  ||||  |||||||||| |||   ||| ||||||||||| ||  ||||||||||| ||| || || |||     
T  51796 tgttggaacatatgtgaaaattgagt-aattgactaaacacaaattcccacaatgggtagaattagtgtagtgtgaattgaaaaaagtggaagtcacacg 51894  T
Q  130 tgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 209  Q
    |  ||||||||||||| |||| |||||||||||||  || |||||||| |||     ||| | |||||||| |||||||||||||    
T  51895 tcggatggatcacacattagtagtgtttatatagtaggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 51979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 2862426 - 2862510
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || ||||||||||||||  ||||| |||||    
T  2862426 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaattagtgttgtgtgaattaaaaaa 2862510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 24588522 - 24588568
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 76  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  24588522 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattc 24588568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 28963740 - 28963786
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattc 76  Q
    ||||| ||||||||||||||||||||||||||||   ||||||||||    
T  28963740 tgttggaacatgtgtggaaattgagttaaaagaccaaacacaaattc 28963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 15645771 - 15645702
Alignment:
Q  140 cacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 209  Q
    |||||| ||||||| |||||||||||||| || ||||| ||  || | |||||||| |||||||||||||    
T  15645771 cacacattagtggtatttatatagtgagggtgcacctctaagcggctacataattatgtgaacgaagtaa 15645702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 2881729 - 2881813
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaa 114  Q
    ||||| |||||||||  |||||||||||||| |||  |||||||||||||| |  || |||| |||||||||  ||||| |||||    
T  2881729 tgttggaacatgtgtaaaaattgagttaaaaaactagacacaaattctcacatttggtagaactagtgttgtgtgaattaaaaaa 2881813  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 2886402 - 2886434
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaaga 62  Q
    |||||||||||||||| ||||||||||||||||    
T  2886402 tgttgaaacatgtgtgaaaattgagttaaaaga 2886434  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 48895 - 48970
Alignment:
Q  84 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 159  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  48895 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 48970  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 149739 - 149664
Alignment:
Q  84 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 159  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  149739 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 149664  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 8763 - 8718
Alignment:
Q  30 tgttgaaacatgtgtggaaattgagttaaaagactttacacaaatt 75  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||    
T  8763 tgttgaaacatgtgtggaaattgaattaaaatactaaacacaaatt 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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