View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2877_high_18 (Length: 238)
Name: NF2877_high_18
Description: NF2877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2877_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19166986 - 19167206
Alignment:
| Q |
1 |
ttaccgatgtgcataaatggacgtcgaaagaagtttggtatgaacgtggtgcgtgggtacgaatctatggtacgccggtacatgcttggaacataaattt |
100 |
Q |
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| T |
19166986 |
ttaccgatgtgcataaatggacgtcgaaagaagtttggtatgaacgtggtgcttgggtacgaatctatggtacgccggtacatgcttggaacataaattt |
19167085 |
T |
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| Q |
101 |
tttcaagctatgtgtttctaagtgtggaagatttgtgcgggaggatgagtgtactttggaaagaggtagaattgattttgcacgaattcttatttctacg |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19167086 |
tttcaagctatgtgtttctaagtgtggaaggtttgtgcgggaggatgagtgtactttggaaagaggtagaattgattttgcacgaattcttatttctacg |
19167185 |
T |
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| Q |
201 |
tattctttggaggtgttgaac |
221 |
Q |
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||||||||||||||||||||| |
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| T |
19167186 |
tattctttggaggtgttgaac |
19167206 |
T |
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