View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2877_high_9 (Length: 310)
Name: NF2877_high_9
Description: NF2877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2877_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 14443866 - 14443587
Alignment:
| Q |
14 |
gaacaaaaatagtttaacattctaatagggataaaaatgaaggagaaaaacaaaagtagatattattgttgaatgagaattcattcacttcccctagaaa |
113 |
Q |
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| T |
14443866 |
gaacaaaaatagtttaacattctaatagggataaaaatgaaggagaaaaacaaaagtagatattattgttgaatgagaattcattcacttcccctagaaa |
14443767 |
T |
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| Q |
114 |
aacatacaaattcatttttatattcactcaaaaaagtaacttgattttatattcaaattttgacttttatggtttgatccaacagtcatgatttacacat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14443766 |
aacatacaaattcatttttatattcactcaaaaaagtaacttgattttatattcaaattttgacttttatggtttgatccaacagtcatgatttacacat |
14443667 |
T |
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| Q |
214 |
ctccttcacattagaaagcactctctccctatatatatgtatgcagacacaacggcaaaataaataaaaataaaccaaac |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14443666 |
ctccttcacattagaaagcactctctccctatatatatgtatgcagacacaacggcaaaataaataaaaataaaccaaac |
14443587 |
T |
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