View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2878_low_1 (Length: 970)

Name: NF2878_low_1
Description: NF2878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2878_low_1
NF2878_low_1
[»] chr1 (48 HSPs)
chr1 (210-954)||(17778790-17779536)
chr1 (24-221)||(17778573-17778770)
chr1 (31-121)||(47989531-47989625)
chr1 (343-439)||(24915058-24915155)
chr1 (343-467)||(51695473-51695598)
chr1 (343-470)||(34290202-34290330)
chr1 (375-441)||(6102153-6102219)
chr1 (357-439)||(45975671-45975753)
chr1 (343-470)||(31517716-31517844)
chr1 (384-466)||(35925698-35925780)
chr1 (378-468)||(37811854-37811944)
chr1 (368-469)||(2777884-2777985)
chr1 (346-482)||(7218039-7218175)
chr1 (345-441)||(27820342-27820439)
chr1 (369-441)||(14629971-14630043)
chr1 (343-468)||(15942725-15942851)
chr1 (31-118)||(9629834-9629925)
chr1 (31-122)||(1486645-1486734)
chr1 (363-470)||(3233990-3234098)
chr1 (385-469)||(7262495-7262579)
chr1 (32-121)||(40917784-40917877)
chr1 (343-407)||(3069973-3070039)
chr1 (375-470)||(10744300-10744395)
chr1 (384-430)||(12564515-12564561)
chr1 (170-204)||(27820360-27820394)
chr1 (34-121)||(32461395-32461485)
chr1 (384-470)||(35058408-35058494)
chr1 (369-430)||(4768845-4768906)
chr1 (375-428)||(7137016-7137069)
chr1 (347-439)||(17603391-17603484)
chr1 (346-406)||(25006074-25006135)
chr1 (374-467)||(37842334-37842427)
chr1 (171-204)||(45975704-45975737)
chr1 (171-204)||(51695518-51695551)
chr1 (350-437)||(2294884-2294972)
chr1 (31-67)||(6612160-6612196)
chr1 (343-470)||(10199384-10199512)
chr1 (31-67)||(31694699-31694735)
chr1 (173-204)||(1232928-1232959)
chr1 (375-434)||(7472310-7472369)
chr1 (360-482)||(49938731-49938853)
chr1 (369-463)||(17420196-17420290)
chr1 (31-82)||(30173732-30173787)
chr1 (388-450)||(40943223-40943285)
chr1 (415-468)||(4481969-4482022)
chr1 (375-456)||(6231806-6231887)
chr1 (171-204)||(7137021-7137054)
chr1 (31-60)||(24577182-24577211)
[»] chr4 (39 HSPs)
chr4 (726-834)||(4331185-4331294)
chr4 (363-482)||(21731620-21731739)
chr4 (374-457)||(1312839-1312922)
chr4 (31-121)||(30982809-30982903)
chr4 (369-482)||(50799995-50800106)
chr4 (343-430)||(51630077-51630165)
chr4 (386-457)||(488115-488186)
chr4 (343-441)||(7694015-7694114)
chr4 (343-468)||(2996539-2996665)
chr4 (318-452)||(42121427-42121563)
chr4 (348-429)||(54392836-54392918)
chr4 (384-465)||(20936210-20936291)
chr4 (343-468)||(35064821-35064944)
chr4 (363-470)||(35571606-35571714)
chr4 (343-441)||(3155569-3155668)
chr4 (343-421)||(30581702-30581781)
chr4 (363-405)||(16200022-16200064)
chr4 (369-439)||(17822872-17822942)
chr4 (384-457)||(825479-825552)
chr4 (384-437)||(11158366-11158419)
chr4 (343-439)||(55414427-55414524)
chr4 (369-453)||(11264294-11264378)
chr4 (31-121)||(3947703-3947791)
chr4 (345-404)||(29912917-29912976)
chr4 (374-437)||(40174561-40174624)
chr4 (343-437)||(54325046-54325141)
chr4 (343-460)||(6466032-6466150)
chr4 (34-120)||(28084559-28084640)
chr4 (390-452)||(28749901-28749963)
chr4 (345-430)||(49219107-49219193)
chr4 (126-204)||(51630080-51630158)
chr4 (345-469)||(1137680-1137805)
chr4 (390-439)||(2244065-2244114)
chr4 (171-204)||(17822888-17822921)
chr4 (31-113)||(19312369-19312455)
chr4 (384-465)||(30631964-30632045)
chr4 (346-406)||(35958624-35958685)
chr4 (343-439)||(50681096-50681193)
chr4 (374-463)||(52754598-52754686)
[»] chr7 (42 HSPs)
chr7 (343-463)||(12110326-12110447)
chr7 (31-121)||(24339676-24339770)
chr7 (31-113)||(25822689-25822775)
chr7 (374-470)||(33678778-33678875)
chr7 (31-121)||(5409773-5409861)
chr7 (31-67)||(11272575-11272611)
chr7 (375-459)||(25130076-25130160)
chr7 (417-468)||(19719047-19719098)
chr7 (343-468)||(20526412-20526539)
chr7 (348-430)||(44821930-44822013)
chr7 (31-65)||(18039033-18039067)
chr7 (385-470)||(36517588-36517672)
chr7 (343-439)||(40688993-40689090)
chr7 (363-428)||(43648227-43648292)
chr7 (396-456)||(2767168-2767228)
chr7 (363-482)||(19022549-19022668)
chr7 (31-121)||(21880186-21880269)
chr7 (69-121)||(22484090-22484142)
chr7 (368-436)||(33673069-33673137)
chr7 (385-469)||(45078287-45078371)
chr7 (369-421)||(47177629-47177681)
chr7 (343-470)||(48157096-48157224)
chr7 (416-467)||(11048067-11048118)
chr7 (31-66)||(21560537-21560572)
chr7 (31-66)||(26033451-26033486)
chr7 (343-421)||(27548229-27548308)
chr7 (56-119)||(40287306-40287368)
chr7 (374-469)||(44615081-44615176)
chr7 (343-405)||(46825064-46825127)
chr7 (173-204)||(47177652-47177683)
chr7 (32-83)||(2334285-2334339)
chr7 (32-66)||(9408324-9408358)
chr7 (415-477)||(15740380-15740442)
chr7 (375-469)||(30535562-30535656)
chr7 (415-465)||(32425352-32425402)
chr7 (68-121)||(598272-598325)
chr7 (376-441)||(18749822-18749887)
chr7 (396-465)||(25670567-25670636)
chr7 (31-60)||(27945075-27945104)
chr7 (384-421)||(32410547-32410584)
chr7 (363-428)||(46280290-46280355)
chr7 (384-429)||(47130802-47130847)
[»] chr6 (41 HSPs)
chr6 (374-477)||(31624088-31624191)
chr6 (371-430)||(835265-835324)
chr6 (384-470)||(20368156-20368242)
chr6 (343-441)||(9093561-9093660)
chr6 (31-121)||(16766731-16766825)
chr6 (31-67)||(9107359-9107395)
chr6 (385-456)||(2455819-2455890)
chr6 (385-456)||(4420652-4420723)
chr6 (31-91)||(5970069-5970133)
chr6 (33-121)||(8365450-8365542)
chr6 (31-91)||(8714014-8714078)
chr6 (31-103)||(9522925-9523001)
chr6 (363-438)||(34430469-34430544)
chr6 (378-468)||(31686341-31686431)
chr6 (32-120)||(32978842-32978923)
chr6 (376-468)||(2455259-2455352)
chr6 (343-439)||(2735035-2735132)
chr6 (343-439)||(14492268-14492365)
chr6 (31-121)||(18367870-18367964)
chr6 (387-456)||(34939755-34939824)
chr6 (363-428)||(35099024-35099089)
chr6 (363-439)||(6536602-6536678)
chr6 (347-410)||(6909908-6909972)
chr6 (363-407)||(11784069-11784113)
chr6 (385-441)||(17241257-17241313)
chr6 (375-462)||(738664-738751)
chr6 (376-431)||(1497981-1498036)
chr6 (363-470)||(10616689-10616795)
chr6 (32-67)||(21395297-21395332)
chr6 (374-428)||(837234-837288)
chr6 (364-406)||(1401097-1401139)
chr6 (415-477)||(1575934-1575996)
chr6 (349-450)||(6647359-6647461)
chr6 (31-121)||(10770609-10770699)
chr6 (344-405)||(24626262-24626324)
chr6 (34-67)||(785444-785477)
chr6 (171-204)||(835272-835305)
chr6 (384-441)||(2205595-2205652)
chr6 (31-60)||(9911524-9911553)
chr6 (412-457)||(34403891-34403936)
chr6 (171-204)||(34430484-34430517)
[»] chr2 (58 HSPs)
chr2 (343-462)||(28039316-28039436)
chr2 (343-428)||(11513864-11513950)
chr2 (343-428)||(12464491-12464577)
chr2 (363-462)||(680490-680589)
chr2 (363-441)||(29628748-29628826)
chr2 (343-470)||(33256706-33256834)
chr2 (376-470)||(16451118-16451213)
chr2 (348-438)||(18066099-18066190)
chr2 (375-470)||(29316751-29316846)
chr2 (343-453)||(33931563-33931674)
chr2 (385-456)||(34652026-34652097)
chr2 (343-457)||(44438828-44438943)
chr2 (344-465)||(33941876-33941998)
chr2 (31-121)||(37419777-37419871)
chr2 (343-439)||(41851501-41851598)
chr2 (343-482)||(12313138-12313277)
chr2 (343-482)||(41241097-41241236)
chr2 (344-470)||(8017401-8017528)
chr2 (31-118)||(23058389-23058467)
chr2 (33-121)||(26769547-26769639)
chr2 (344-470)||(36415650-36415776)
chr2 (376-482)||(40682359-40682464)
chr2 (352-430)||(16353837-16353915)
chr2 (363-441)||(26626860-26626938)
chr2 (343-468)||(35485883-35486009)
chr2 (347-440)||(3235390-3235483)
chr2 (343-430)||(7103498-7103587)
chr2 (31-121)||(30717461-30717555)
chr2 (384-469)||(35378993-35379078)
chr2 (384-441)||(40279275-40279332)
chr2 (384-441)||(40279345-40279402)
chr2 (384-437)||(40279415-40279468)
chr2 (31-121)||(2438661-2438744)
chr2 (348-427)||(5759594-5759674)
chr2 (384-468)||(43065428-43065512)
chr2 (386-441)||(750680-750735)
chr2 (343-438)||(1056361-1056456)
chr2 (384-455)||(1939323-1939394)
chr2 (384-439)||(3611234-3611289)
chr2 (31-66)||(4882686-4882721)
chr2 (391-470)||(26857086-26857165)
chr2 (347-441)||(40279167-40279262)
chr2 (385-456)||(41042012-41042083)
chr2 (348-441)||(1625871-1625965)
chr2 (376-470)||(1742008-1742102)
chr2 (384-438)||(3227691-3227745)
chr2 (343-456)||(9478265-9478379)
chr2 (412-470)||(38809362-38809420)
chr2 (343-456)||(43141837-43141951)
chr2 (171-204)||(4606939-4606972)
chr2 (375-459)||(9174814-9174899)
chr2 (31-121)||(11223795-11223888)
chr2 (415-468)||(13220472-13220525)
chr2 (374-439)||(16867737-16867802)
chr2 (363-428)||(33319830-33319895)
chr2 (68-121)||(37497185-37497238)
chr2 (343-407)||(39073728-39073793)
chr2 (371-482)||(43279491-43279604)
[»] chr8 (35 HSPs)
chr8 (363-469)||(43504738-43504844)
chr8 (343-436)||(6509313-6509407)
chr8 (342-470)||(42215282-42215411)
chr8 (36-121)||(22652015-22652104)
chr8 (343-440)||(2482831-2482927)
chr8 (368-439)||(27028823-27028894)
chr8 (345-430)||(28769355-28769441)
chr8 (368-444)||(8062321-8062397)
chr8 (348-439)||(37353256-37353348)
chr8 (369-456)||(30013211-30013298)
chr8 (385-456)||(36643883-36643954)
chr8 (384-470)||(7918422-7918508)
chr8 (343-468)||(10114456-10114582)
chr8 (363-421)||(29168082-29168140)
chr8 (361-407)||(32841347-32841393)
chr8 (343-441)||(33714241-33714339)
chr8 (376-441)||(1930035-1930100)
chr8 (31-121)||(29510235-29510329)
chr8 (345-436)||(7918783-7918875)
chr8 (376-456)||(11569447-11569527)
chr8 (369-437)||(31705078-31705146)
chr8 (32-67)||(2572045-2572080)
chr8 (390-441)||(3536950-3537001)
chr8 (31-66)||(25566875-25566910)
chr8 (412-470)||(926511-926569)
chr8 (343-429)||(3537046-3537135)
chr8 (343-420)||(4558764-4558842)
chr8 (374-468)||(11183543-11183637)
chr8 (384-434)||(14929150-14929200)
chr8 (376-430)||(30277261-30277315)
chr8 (170-204)||(31916617-31916651)
chr8 (425-470)||(2487984-2488029)
chr8 (363-440)||(24558840-24558917)
chr8 (34-67)||(27067289-27067322)
chr8 (370-431)||(38602327-38602388)
[»] chr3 (53 HSPs)
chr3 (32-121)||(27505281-27505368)
chr3 (31-121)||(14209147-14209241)
chr3 (343-463)||(39602193-39602313)
chr3 (33-121)||(41961581-41961673)
chr3 (384-470)||(37273142-37273228)
chr3 (347-470)||(21367637-21367762)
chr3 (343-456)||(2201094-2201208)
chr3 (378-456)||(41452525-41452603)
chr3 (345-430)||(2719437-2719522)
chr3 (384-441)||(35394503-35394560)
chr3 (374-441)||(45264371-45264438)
chr3 (348-470)||(52618974-52619097)
chr3 (343-404)||(14145878-14145940)
chr3 (361-407)||(18405870-18405916)
chr3 (385-467)||(45541580-45541662)
chr3 (374-420)||(46886718-46886764)
chr3 (343-469)||(49465642-49465767)
chr3 (31-113)||(4987230-4987316)
chr3 (376-441)||(20669172-20669237)
chr3 (68-121)||(29508514-29508567)
chr3 (343-407)||(30956665-30956730)
chr3 (343-407)||(30972477-30972542)
chr3 (31-121)||(34185054-34185148)
chr3 (344-428)||(35959474-35959559)
chr3 (376-469)||(41644422-41644515)
chr3 (343-407)||(12862287-12862351)
chr3 (343-470)||(21574457-21574584)
chr3 (390-470)||(23808040-23808120)
chr3 (343-438)||(24887291-24887387)
chr3 (384-468)||(30573892-30573976)
chr3 (384-468)||(36887512-36887596)
chr3 (343-469)||(1816549-1816676)
chr3 (342-404)||(21872313-21872376)
chr3 (374-468)||(25182965-25183060)
chr3 (386-469)||(27896147-27896230)
chr3 (343-441)||(36783339-36783438)
chr3 (368-427)||(44747427-44747486)
chr3 (390-457)||(50952347-50952414)
chr3 (32-66)||(1509574-1509608)
chr3 (160-206)||(2825150-2825196)
chr3 (35-65)||(14829727-14829757)
chr3 (168-202)||(23808089-23808123)
chr3 (343-428)||(30443859-30443945)
chr3 (374-428)||(32582742-32582796)
chr3 (171-204)||(2719482-2719515)
chr3 (31-121)||(14216926-14217020)
chr3 (31-121)||(14223055-14223149)
chr3 (171-204)||(21367681-21367714)
chr3 (384-441)||(26878125-26878182)
chr3 (369-441)||(33405171-33405244)
chr3 (343-428)||(36507109-36507194)
chr3 (343-399)||(38462247-38462304)
chr3 (358-439)||(53789468-53789549)
[»] chr5 (52 HSPs)
chr5 (375-468)||(17368675-17368768)
chr5 (343-430)||(12425537-12425625)
chr5 (387-470)||(4619718-4619801)
chr5 (384-467)||(7674656-7674739)
chr5 (374-441)||(7984967-7985034)
chr5 (384-482)||(37611180-37611277)
chr5 (384-482)||(37787910-37788007)
chr5 (31-113)||(21542064-21542150)
chr5 (343-436)||(32703286-32703378)
chr5 (377-441)||(4014429-4014493)
chr5 (343-430)||(10272447-10272535)
chr5 (344-456)||(36318740-36318854)
chr5 (363-485)||(39105451-39105574)
chr5 (31-113)||(21522784-21522870)
chr5 (31-113)||(21533350-21533436)
chr5 (343-470)||(32172619-32172747)
chr5 (343-441)||(9202753-9202852)
chr5 (343-436)||(14295472-14295566)
chr5 (387-441)||(28413289-28413343)
chr5 (363-441)||(28776980-28777058)
chr5 (369-407)||(32942611-32942649)
chr5 (171-204)||(7984983-7985016)
chr5 (32-113)||(17088320-17088400)
chr5 (376-441)||(34160731-34160796)
chr5 (344-430)||(36325977-36326065)
chr5 (31-121)||(39698575-39698669)
chr5 (363-467)||(6587086-6587190)
chr5 (376-468)||(11707055-11707147)
chr5 (34-113)||(31084360-31084437)
chr5 (344-407)||(32372591-32372655)
chr5 (31-67)||(37328833-37328869)
chr5 (343-406)||(38047895-38047959)
chr5 (343-470)||(6593266-6593393)
chr5 (344-406)||(18857440-18857503)
chr5 (31-66)||(21351895-21351930)
chr5 (363-430)||(26005013-26005080)
chr5 (176-210)||(1773422-1773456)
chr5 (345-406)||(12975315-12975377)
chr5 (172-202)||(35445868-35445898)
chr5 (384-470)||(41052876-41052962)
chr5 (376-464)||(3280696-3280785)
chr5 (171-204)||(4014447-4014480)
chr5 (171-204)||(7319031-7319064)
chr5 (171-204)||(7674662-7674695)
chr5 (343-439)||(16937890-16937987)
chr5 (363-436)||(23994726-23994799)
chr5 (374-439)||(33533546-33533611)
chr5 (391-428)||(35445861-35445898)
chr5 (171-204)||(36318788-36318821)
chr5 (171-204)||(39105478-39105511)
chr5 (170-203)||(42569475-42569508)
chr5 (376-441)||(42582912-42582977)
[»] scaffold0136 (1 HSPs)
scaffold0136 (31-121)||(3780-3874)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-121)||(241629-241722)
[»] scaffold0019 (1 HSPs)
scaffold0019 (31-121)||(71759-71853)
[»] scaffold0036 (1 HSPs)
scaffold0036 (31-123)||(9676-9772)
[»] scaffold0608 (1 HSPs)
scaffold0608 (415-468)||(9615-9668)
[»] scaffold0223 (1 HSPs)
scaffold0223 (31-64)||(20206-20239)


Alignment Details
Target: chr1 (Bit Score: 663; Significance: 0; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 663; E-Value: 0
Query Start/End: Original strand, 210 - 954
Target Start/End: Original strand, 17778790 - 17779536
Alignment:
Q  210 ataagctaaagtaagccaatccagacggacccttatttatatgagctcatatgaataagcgcttattgtataagctcggtatggataggttcttatcata 309  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17778790 ataagctaaagtaagccaatccagatggacccttatttatatgagctcatatgaataagcgcttattgtataagctcggtatgaataggttcttatcata 17778889  T
Q  310 gaagtttgtatgaatatgctatctatatt-cacgagataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaat 408  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17778890 gaagtttgtatgaatatgctatttatattacacgagataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaat 17778989  T
Q  409 ttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaaacaatctcataatgtgtgatgtgcttgaattagag 508  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17778990 ttttggaaataaggtgaaaacagtttatgaacacgttataagttgtttttataagttctccgcaaacaatctcataatgtgtgatgtgcttgaattagag 17779089  T
Q  509 tttggaagcggcgctcgtctgtttcttgacaagggtgtgtttcggtgtctatttttgttgcctctgggttttttgtttaagcagttcgggtatttttgtt 608  Q
    ||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17779090 tttggaagcggggctcttctgtttcttgtcaagggtgtgttttggtgtctatttttgttgcctctgggttttttgtttaagcagttcgggtgtttttgtt 17779189  T
Q  609 gggctaccattagagtttggttgattacat-atatgcttagattgaaccccacactaatacaacactaacatgtactctagttgagtggtgtatataatt 707  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17779190 gggctaccattagagtttggttgattacatgatatgcttagattaaaccccatactaatacaacactaacatgtactctagttgagtggtgtatataatt 17779289  T
Q  708 tatggttagattttatgcgatgctcttgcctggcttattgattacataatttggtttggtgggatttgaattctagatgggaactgggaagctacataat 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17779290 tatggttagattttatgcgatgctcttgcctggcttattgattacataatttggtttggtgggatttgaattctagatgggaactgggaagctacataat 17779389  T
Q  808 gagcttctttagttaggcatacatcttgtgtagtgtgttttacatacatgatgaggtagctagatagtatcataaatcaatacaagttcactatttcatt 907  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17779390 gagcttctttaattaggcatacatcttgtgtagtgtgttttacatacatgatgaggtagctagatagtatcataaatcaatacaagttcactatttcatt 17779489  T
Q  908 gaagctccaagtaaaaatgaattaatagaataaaatatataaatgag 954  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  17779490 gaagttccaagcaaaaatgaattaatagaatagaatatataaatgag 17779536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 17778573 - 17778770
Alignment:
Q  24 tcacatacagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcatgt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || ||||||||     
T  17778573 tcacatacagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcatgc 17778672  T
Q  124 cttaaaatgaagttaaactatttacatacaagcgaaaagttatttctataagctatcttggagaatttatgaaaataagcttatgaataagctaaagt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17778673 cttaaaatgaagttaaactatttacatacaagcgaaaagttatttctataagctatcttggagaatttatgaaaataagcttatgaataagctaaagt 17778770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 47989531 - 47989625
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||| |||||||||||| | ||||||| || |||||||| |||||||    
T  47989531 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 24915155 - 24915058
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||||| || || ||||||| |||||| || |||||||    
T  24915155 agataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaa 24915058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 467
Target Start/End: Complemental strand, 51695598 - 51695473
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-a 441  Q
    |||||||||||||| || | |||| ||||| | ||| ||  ||||||||||||||||||||||||||| || ||||||| |||||| || |||||||| |    
T  51695598 agataaaataaagtaaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaa 51695499  T
Q  442 cgtgataagttgttttaataagttct 467  Q
     ||||||||||||||  |||||||||    
T  51695498 tgtgataagttgtttatataagttct 51695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 34290202 - 34290330
Alignment:
Q  343 agataaaataaagtcaaattt-tttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| || ||| ||| ||||| ||||||||| ||||||||||||||||||| |||| || || ||||||| ||||||||  ||||||| |    
T  34290202 agataaaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaata 34290301  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || ||||| | ||||||||| |||||||    
T  34290302 tgtcataagcttttttaataaattctccc 34290330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 441
Target Start/End: Original strand, 6102153 - 6102219
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||    
T  6102153 ctataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaaca 6102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 439
Target Start/End: Original strand, 45975671 - 45975753
Alignment:
Q  357 caaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||| |||| ||||| |||| |||| ||||||||||||||||||||||||||| || ||||||| ||||||||| |||||||    
T  45975671 caaatatttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 470
Target Start/End: Complemental strand, 31517844 - 31517716
Alignment:
Q  343 agataaaataaagtcaaattt-tttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| |||||  |||  |||| ||||||||| || ||||||| || |||||||||  || || ||||||| ||||||||| |||||||||    
T  31517844 agataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaaca 31517745  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || || ||||||||| ||||||||||||    
T  31517744 tgtcatgagttgttttgataagttctccc 31517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 35925698 - 35925780
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttc 466  Q
    |||| ||||||||||| |||||| ||| |||||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||    
T  35925698 gtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 378 - 468
Target Start/End: Original strand, 37811854 - 37811944
Alignment:
Q  378 taagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||| |||||||||||| ||| ||||||  |  |||||||||| ||||||||||||||||||| || ||||| |||||| ||||||||||    
T  37811854 taagctgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctc 37811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 2777884 - 2777985
Alignment:
Q  368 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttct 467  Q
    ||||| ||||||||| ||||| ||||| || ||||||||| || || ||||||| ||||||| | ||||||| |||| |||||||| ||| |||||||||    
T  2777884 gtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttct 2777983  T
Q  468 cc 469  Q
    ||    
T  2777984 cc 2777985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 482
Target Start/End: Complemental strand, 7218175 - 7218039
Alignment:
Q  346 taaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgt 444  Q
    ||||||||||||||||| ||||  |||| ||||||||  |||||||||| ||||| ||||||| || || ||||||| ||||||||| || |||||  ||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgt 7218076  T
Q  445 gataagttgttttaataagttctccccaaacaatctca 482  Q
     |||||| ||||| | ||| || |||||||||||||||    
T  7218075 cataagtcgttttcacaagctc-ccccaaacaatctca 7218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 27820439 - 27820342
Alignment:
Q  345 ataaaataaagtcaaatttttta-gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||  ||||| |||| ||||| |||||| || ||||| ||||||||||||||||||||| || ||||||| |||||| || |||||||||    
T  27820439 ataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 14630043 - 14629971
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| |||||||||  |||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaaca 14629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 468
Target Start/End: Complemental strand, 15942851 - 15942725
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca-gtttatgaac 440  Q
    ||||||||||||||||| || ||||  |||||| ||||| | ||||||||||  |||||||||||| || | |||||||| |||||||| | ||||||||    
T  15942851 agataaaataaagtcaatttgttttcatatatgatataa-ctgttttcataatttatcttggagaacttattgaaataagctgaaaacatgcttatgaac 15942753  T
Q  441 acgtgataagttgttttaataagttctc 468  Q
    | || |||||||||||| |||| |||||    
T  15942752 atgtcataagttgttttcataaattctc 15942725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 9629925 - 9629834
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgctt 118  Q
    |||||| |||| ||||||||||||||||||| |||||    |||||||||||||||| ||||||| | ||  ||||||||||||||| ||||    
T  9629925 cagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 1486734 - 1486645
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcatg 122  Q
    ||||||||||| |||||||||||||||||||  | | |||||| ||||||||| ||||||| | ||||||| || |||||| | ||||||||    
T  1486734 cagtgtaattataagtgtcggtgtcgtgtcg--gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcatg 1486645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 3234098 - 3233990
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac-gtgataagttgttttaata 461  Q
    |||| ||||||||||||||  ||||| ||||||||| |||||||| || || |||||||  ||||| |  ||||||| || || |||||||||||| |||    
T  3234098 tttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcata 3233999  T
Q  462 agttctccc 470  Q
    |||||||||    
T  3233998 agttctccc 3233990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 7262579 - 7262495
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    ||||||||||||||| || |||  || |||||||||||||||||||| ||||||||| || | ||| |||||| ||||| |||||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctcc 7262495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 40917784 - 40917877
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgt----cgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||| ||||||||||||||||||    | |||||| ||||||||| ||||||| | ||||||| || | |||||| |||||||    
T  40917784 agtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 3070039 - 3069973
Alignment:
Q  343 agataaaataaagtcaaatt--ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    ||||||||| |||| |||||  |||| ||||||||||||||| |||||| |||||||||||||||||    
T  3070039 agataaaatgaagttaaattgtttttcgtatatgctataagctgttttcgtaagctatcttggagaa 3069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 10744300 - 10744395
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||| ||||||||||||| |||| ||||| || |  ||||||| ||||||||| ||||||||| |  ||||| |||||| | ||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctccc 10744395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 12564561 - 12564515
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||    
T  12564561 gttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 27820394 - 27820360
Alignment:
Q  170 tataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||||||||||||||||||||    
T  27820394 tataagctatcttggagaatttatgaaaataagct 27820360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 32461485 - 32461395
Alignment:
Q  34 tgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||| ||||| ||||||||||||    |||||| |||| ||||  |||||| | ||||||||||||||||||| |||||||    
T  32461485 tgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcat 32461395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 35058494 - 35058408
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||| |||||||||||||||| ||  | || |||| ||||||||| ||| ||||| || ||||||| ||||| |||||||||||    
T  35058494 gttttcagaagctatcttggagaacttacgaaagtaagctgaaaacagcttacgaacatgtaataagttattttagtaagttctccc 35058408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 4768906 - 4768845
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||||| ||||  |||||||| | ||||||||||||||| |||||||||| ||||||||    
T  4768906 tatatgctagaagctattttcatatgatatcttggagaatttatggaaataagctgaaaaca 4768845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 428
Target Start/End: Complemental strand, 7137069 - 7137016
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||||||| |||||||||||||||||||||||| || || ||||||| ||||||    
T  7137069 ctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 439
Target Start/End: Complemental strand, 17603484 - 17603391
Alignment:
Q  347 aaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||| || ||||| |||| ||||||||||||||  ||||| ||||||||| |||||||| || || ||||||| || ||| ||||||||||    
T  17603484 aaaataacgttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaa 17603391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 25006135 - 25006074
Alignment:
Q  346 taaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    ||||||||||||||||| ||||  |||| ||||||||  |||||||||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggaga 25006074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 467
Target Start/End: Complemental strand, 37842427 - 37842334
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttct 467  Q
    ||||||||  ||||||||||||||||||| |||| || |  ||||||| ||||||| | ||||||||| || || || |||||| |||||||||    
T  37842427 gctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 45975704 - 45975737
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||||||||||||||||    
T  45975704 ataagctatcttggagaatttatgaaaataagct 45975737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 51695551 - 51695518
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||||||||||||||||    
T  51695551 ataagctatcttggagaatttatgaaaataagct 51695518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 2294884 - 2294972
Alignment:
Q  350 ataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    ||||||| ||||| |||| | ||| |||||||||  ||||||||| ||||||||||||| ||  | ||||||||||||||||| |||||    
T  2294884 ataaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatg 2294972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 6612196 - 6612160
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6612196 cagtgtaattacaagtgtcggtgtcgtgtcgatgtcg 6612160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 470
Target Start/End: Complemental strand, 10199512 - 10199384
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | |||| |||||  | ||||||  |||||||||||||| || ||||  || || ||||||| ||||||||  |||||||||    
T  10199512 agataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca 10199413  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || ||||| | |||| || |||||||||    
T  10199412 tgtcataagctattttcatgagttctccc 10199384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 31694735 - 31694699
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31694735 cagtataattacaagtgtcggtgtcgtgtcggtgtcg 31694699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 1232959 - 1232928
Alignment:
Q  173 aagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||||||||||||||    
T  1232959 aagctatcttggagaatttatgaaaataagct 1232928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 7472310 - 7472369
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagttt 434  Q
    |||||||| |||| ||||||||||||||||||  || || ||||||| ||||||||||||    
T  7472310 ctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttt 7472369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 482
Target Start/End: Original strand, 49938731 - 49938853
Alignment:
Q  360 attttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac-gtgataagttgtttta 458  Q
    ||||||| ||||||| ||||||  ||||| ||||||||| || ||||| || || ||||||| |||||| || || |||| |  || ||||| ||||||     
T  49938731 atttttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttc 49938830  T
Q  459 ataagttctccccaaacaatctca 482  Q
    ||||||||| ||||||||||||||    
T  49938831 ataagttct-cccaaacaatctca 49938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 463
Target Start/End: Original strand, 17420196 - 17420290
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataag 463  Q
    |||| ||||||| | |||||| ||||||||||  || || |  |||||||||| |||||||| |||||| ||| || |||||||||||| |||||    
T  17420196 tataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataagttgttttcataag 17420290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 30173787 - 30173732
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgac 82  Q
    |||||||||||||||||||||||||||||| || |||    |||||||||||||||    
T  30173787 cagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgac 30173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 450
Target Start/End: Complemental strand, 40943285 - 40943223
Alignment:
Q  388 tcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataag 450  Q
    ||||||||||| |||||||  || | |||||||| ||||||||||||||||||| || |||||    
T  40943285 tcataagctattttggagagcttgtagaaataagttgaaaacagtttatgaacatgttataag 40943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 468
Target Start/End: Original strand, 4481969 - 4482022
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||| | ||||||| ||||||||| || |||||||||||| ||||||||||    
T  4481969 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctc 4482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 6231887 - 6231806
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    |||||||| |||||| ||||||| | || |||| || | |||||||| ||||||||||||||| ||| || || ||||||||    
T  6231887 ctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcattagttgttt 6231806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 7137054 - 7137021
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  7137054 ataagctatcttggagaacttatgaaaataagct 7137021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 60
Target Start/End: Complemental strand, 24577211 - 24577182
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtc 60  Q
    ||||||||||||||||||||||||||||||    
T  24577211 cagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 5e-31; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 834
Target Start/End: Complemental strand, 4331294 - 4331185
Alignment:
Q  726 gatgctcttg-cctggcttattgattacataatttggtttggtgggatttgaattctagatgggaactgggaagctacataatgagcttctttagttagg 824  Q
    |||||||||| |||| | |||||||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  4331294 gatgctcttggcctgacatattgattacctaaattagtttggtgggatttgaattctagatggaaactgggaagctacatgacgagcttctttagttagg 4331195  T
Q  825 catacatctt 834  Q
    ||||||||||    
T  4331194 catacatctt 4331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 482
Target Start/End: Complemental strand, 21731739 - 21731620
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca-cgtgataagttgttttaata 461  Q
    |||| |||| |||||||||  ||||| ||||||||| ||||||||||| || || |||| |||||| |||||||||| |  |||||||| |||||| |||    
T  21731739 tttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcata 21731640  T
Q  462 agttctccccaaacaatctca 482  Q
    |||||| ||||||||||||||    
T  21731639 agttct-cccaaacaatctca 21731620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 374 - 457
Target Start/End: Original strand, 1312839 - 1312922
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgtttt 457  Q
    ||||||| ||||||||||   |||||||||||| ||| |||||||||| ||||||||||||||||| | || ||||||||||||    
T  1312839 gctataaacagttttcatggtctatcttggagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgtttt 1312922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 30982903 - 30982809
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgt----cgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||| |||||||||||||||||||||||    | |||||| ||||||||| ||||||| | |||||||||  |||||||| |||||||    
T  30982903 cagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 482
Target Start/End: Complemental strand, 50800106 - 50799995
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    |||| ||||||||| |||||| ||||||||| ||||||| ||| ||||||||| ||||||||| ||||  ||| || |||||||||||  || ||||||     
T  50800106 tataagctataagctgttttcttaagctatcatggagaacttt-ggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttct- 50800009  T
Q  469 cccaaacaatctca 482  Q
    ||||||||||||||    
T  50800008 cccaaacaatctca 50799995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 51630077 - 51630165
Alignment:
Q  343 agataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||| ||||| ||| | |||| |||||||||  |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  51630077 agataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 488186 - 488115
Alignment:
Q  386 tttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgtttt 457  Q
    |||||||||||||||||||||||||  | ||||||| ||||||||| ||||| ||| || ||||||||||||    
T  488186 tttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagttgtttt 488115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 441
Target Start/End: Complemental strand, 7694114 - 7694015
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| |||| |||||||| | |||| ||||| ||||||||| ||||||||||| |||| |||||| ||| |||||||||| ||||||||  |||||||||    
T  7694114 agatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaaca 7694015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 2996539 - 2996665
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||| ||||||||| ||||  |||| | ||||||  |||||||||||||||||||||||   | || ||||||| |||||| || ||||| |||    
T  2996539 agataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggaca 2996638  T
Q  442 cgtgataagttgttttaataagttctc 468  Q
     || |||||||||||| ||||| ||||    
T  2996639 tgtcataagttgttttcataagctctc 2996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 452
Target Start/End: Original strand, 42121427 - 42121563
Alignment:
Q  318 tatgaatatgctatctatatt-cacgagataaaataaagtcaaatttttta--gtatatgctataagcagttttcataagctatcttggagaatttttgg 414  Q
    |||||||| ||||| | |||| ||| |||||||||||| | |||||| ||   ||||| ||||||||  |||||||| ||||||||||||||| || |||    
T  42121427 tatgaataagctatttctattacactagataaaataaaataaaatttgtttctgtataagctataagttgttttcatgagctatcttggagaacttgtgg 42121526  T
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagtt 452  Q
    ||||||| || |||||| ||||||||| || |||||||    
T  42121527 aaataagctg-aaacagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 429
Target Start/End: Complemental strand, 54392918 - 54392836
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaac 429  Q
    ||||||||| ||||| |||| ||||||||||| ||| ||||| ||||| |||||||||||| ||||| ||||||| |||||||    
T  54392918 aaataaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 54392836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 20936291 - 20936210
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagtt 465  Q
    |||||||||  ||||| ||||||  || |||||||||||||||||||| |||||||||  | |||||||||||| |||||||    
T  20936291 gttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 35064821 - 35064944
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||  ||| | |||| ||||| |||||| || ||||||||||| |||| |||||| ||| |||||||||| |||||||| ||||| ||||    
T  35064821 agataaaataaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaacaatttataaaca 35064920  T
Q  442 cgtgataagttgttttaataagttctc 468  Q
     |   || |||||||| ||||||||||    
T  35064921 tg---taggttgttttcataagttctc 35064944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 35571714 - 35571606
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca-cgtgataagttgttttaata 461  Q
    |||| ||||| ||||||||| |||||||||||||||||| ||||| || || ||||||| ||||| ||| | |||||||  || ||||| |||||| | |    
T  35571714 ttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaa 35571615  T
Q  462 agttctccc 470  Q
    |||||||||    
T  35571614 agttctccc 35571606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 343 - 441
Target Start/End: Original strand, 3155569 - 3155668
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| |||| ||| | |||| |||| |||||||||| |||||||| |||| |  || ||||||| ||||||||||||| |||||    
T  3155569 agataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaaaacagtttacgaaca 3155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 30581781 - 30581702
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataag 421  Q
    ||||||||| |||||||| | |||| ||||| ||||||||| ||||| ||||| ||||||||||| ||| ||||||||||    
T  30581781 agataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 16200064 - 16200022
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggag 405  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  16200064 tttttgtatatgctataagctgttttcataagctatcttggag 16200022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 17822942 - 17822872
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||||||||||||  |||||||||||||||||||||||| || || ||||||| | |||| || |||||||    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 825552 - 825479
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgtttt 457  Q
    ||||||||||||||| |||||||| || || ||||||| ||||||||||| |||| || || |||||| |||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataagtagtttt 825479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 11158419 - 11158366
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    |||||||||||||||||| ||||  || |||||||||| |||||||||||||||    
T  11158419 gttttcataagctatcttagagagcttgtggaaataagctgaaaacagtttatg 11158366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 55414524 - 55414427
Alignment:
Q  343 agataaaataaagtcaaatttttta-gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||||||||||||| || ||||||  | |||||||||||   ||||||||||| |||||||||||| || || ||||||| |||||| || |||||||    
T  55414524 agataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaa 55414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 11264294 - 11264378
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttg 453  Q
    |||||| ||||||  |||||||||||| ||| | ||||  || |||||||||| ||||||||||||||| ||| || ||||||||    
T  11264294 tatatgttataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttg 11264378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 3947791 - 3947703
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| |||||||||||  | | |||||| ||||||||| | |||||   ||||||| || |||||||| |||||||    
T  3947791 cagtgtaattacaagtgtcagtgtcgtgtcg--gacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 29912917 - 29912976
Alignment:
Q  345 ataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttgga 404  Q
    |||||||||||| ||||| ||| ||||||| || |||  |||||||||||||||||||||    
T  29912917 ataaaataaagtaaaattgttttgtatatgttaaaagtcgttttcataagctatcttgga 29912976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 437
Target Start/End: Original strand, 40174561 - 40174624
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    ||||||||| ||||||||||||||  |||||||| || ||  |||||| |||||||||||||||    
T  40174561 gctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttatg 40174624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 437
Target Start/End: Complemental strand, 54325141 - 54325046
Alignment:
Q  343 agataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    |||||||||||||||||| | ||||  |||| |||||||||  |||||| |||||||| |||||| ||| |||| ||||  ||||||||| |||||    
T  54325141 agataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatg 54325046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 460
Target Start/End: Complemental strand, 6466150 - 6466032
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| ||||||||| ||||| |||| |||||  |||||||  |||| ||||||||||  | ||||  || |||||||||| |||||| || |||||||||    
T  6466150 agatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaaca 6466051  T
Q  442 cgtgataagttgttttaat 460  Q
      | |||||||||||||||    
T  6466050 tctcataagttgttttaat 6466032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 28084559 - 28084640
Alignment:
Q  34 tgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttca 120  Q
    |||||||||||||||| |||||||||||||     ||||| |||||||||  |||||| | ||||||| || |||||||| ||||||    
T  28084559 tgtaattacaagtgtctgtgtcgtgtcggt-----gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 28749963 - 28749901
Alignment:
Q  390 ataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagtt 452  Q
    ||||||||||||||| ||||| || |||| || ||||||||||||||| ||| || |||||||    
T  28749963 ataagctatcttggataatttatgaaaatgagttgaaaacagtttatggacatgtaataagtt 28749901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 345 - 430
Target Start/End: Original strand, 49219107 - 49219193
Alignment:
Q  345 ataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||||||| ||||  |||| ||||||||  |||||||||| |||||||  |||  || |||||||||| ||||||||    
T  49219107 ataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaaca 49219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 51630080 - 51630158
Alignment:
Q  126 taaaatgaagttaaactatttacatacaagcgaaaagttatttctataagctatcttggagaatttatgaaaataagct 204  Q
    |||||| |||||||| | |||  ||| |||| | ||| |||||  ||||||||||||| ||||||||||||||||||||    
T  51630080 taaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagct 51630158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 469
Target Start/End: Original strand, 1137680 - 1137805
Alignment:
Q  345 ataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacg 443  Q
    |||||||||||||| ||| |||| | |||  |||||||| | |||||||| |||||   ||||  || |||||||||  ||||||||  ||||||||| |    
T  1137680 ataaaataaagtcatattatttttgaataatctataagctgctttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatg 1137779  T
Q  444 tgataagttgttttaataagttctcc 469  Q
    | ||||| |||||| |||||||||||    
T  1137780 tcataagatgttttcataagttctcc 1137805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 2244065 - 2244114
Alignment:
Q  390 ataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||| |||||||| || || |||||||||||||| ||||||||||    
T  2244065 ataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaa 2244114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 17822921 - 17822888
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  17822921 ataagctatcttggagaacttatgaaaataagct 17822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 19312369 - 19312455
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    ||||||||||| |||| |||||||||||||| |||||    |||||| ||||||||| || |||| | ||||||  |||||||||||    
T  19312369 cagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccg 19312455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 30631964 - 30632045
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagtt 465  Q
    |||||||| ||||||| || ||   ||||||||||||| | ||||||| ||||||||| |  |||||||||||| |||||||    
T  30631964 gttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttgtttttataagtt 30632045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 35958624 - 35958685
Alignment:
Q  346 taaaataaagtcaaattt-tttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    |||||||||||||||||| |||  |||| |||| |||| |||||||||||||||| ||||||    
T  35958624 taaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggaga 35958685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 50681193 - 50681096
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||||| || ||||| |||| ||||||||||||||  ||||  ||||||||| |||||||| || || ||||||  |||||| || |||||||    
T  50681193 agataaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaa 50681096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 463
Target Start/End: Original strand, 52754598 - 52754686
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataag 463  Q
    ||||||||| ||||||||||||||| | ||| ||| || ||||||||| ||||| ||| ||||| |||||| ||||  |||||| |||||    
T  52754598 gctataagctgttttcataagctatttcgga-aatcttaggaaataagctgaaagcagcttatggacacgtcataaactgttttcataag 52754686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 7e-24; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 12110326 - 12110447
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||| |||| || || ||||||  | |||||||||| ||||||    
T  12110326 agataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaaca 12110425  T
Q  442 cgtgataagttgttttaataag 463  Q
     || |||||||||||| |||||    
T  12110426 tgtcataagttgttttcataag 12110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 24339676 - 24339770
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||||||||||||||||||||    |||||| | ||||||| ||||||| | ||||||| || |||| ||| |||||||    
T  24339676 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 25822689 - 25822775
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    ||||||||||||||||||||||||||| ||||| |||    |||||| |||| |||||||||||||| |||||| ||| ||||||||    
T  25822689 cagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccg 25822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 33678778 - 33678875
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaataagttctccc 470  Q
    ||||||||| ||||||||||||||||||||| || || || ||||||| ||||||||  | |||||| | || |||||||||||| ||||||||||||    
T  33678778 gctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctccc 33678875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 5409861 - 5409773
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||| |||||||||||||||||||||||||  | | |||||| ||||||||| ||||||| | ||||||| || |||||||| |||||||    
T  5409861 cagtgcaattacaagtgtcggtgtcgtgtcg--gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 11272611 - 11272575
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    |||||||||||||||||||||||||||||||||||||    
T  11272611 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 11272575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 459
Target Start/End: Complemental strand, 25130160 - 25130076
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaa 459  Q
    |||||||| ||||||| ||||||||||||| ||||| || ||||| | ||||||||| ||||||||| || ||||  ||||||||    
T  25130160 ctataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgttttaa 25130076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 19719047 - 19719098
Alignment:
Q  417 ataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||| ||||||||||||||||||| || |||||||||||| ||||||||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagttgttttcataagttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 20526412 - 20526539
Alignment:
Q  343 agataaaataaagtcaaatttt-ttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg-aac 440  Q
    |||||||||||||| ||||| | || ||| ||||||||||| ||||||||||||||| |||||||| |  || ||||||| | ||||||| ||| | ||     
T  20526412 agataaaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaa 20526511  T
Q  441 acgtgataagttgttttaataagttctc 468  Q
    | |||||||  |||||| ||||||||||    
T  20526512 atgtgataaactgttttcataagttctc 20526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 44821930 - 44822013
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||||||||||| |||| ||||| | ||||||| |||||||||||||||  ||||||| || || ||||||| ||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaaca 44822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 18039033 - 18039067
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgt 65  Q
    |||||||||||||||||||||||||||||||||||    
T  18039033 cagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 36517588 - 36517672
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||||||||||||||||||| || || ||||||  |||||| || |||||||||  ||  ||| |||||||||||||||||||    
T  36517588 ttttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaaca-atgtcaagctgttttaataagttctccc 36517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 40689090 - 40688993
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||||||||||||| ||||| ||||  |||| ||||||||| || ||||||||||||| |||| || || || ||||||| | ||||||| |||||||    
T  40689090 agataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 43648227 - 43648292
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||  | || ||||||| ||||||    
T  43648227 ttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 456
Target Start/End: Complemental strand, 2767228 - 2767168
Alignment:
Q  396 tatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    |||||||| |||||| |||||||||| ||||||||||| ||| ||| || |||||||||||    
T  2767228 tatcttggtgaatttatggaaataagttgaaaacagttgatggacatgtaataagttgttt 2767168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 482
Target Start/End: Complemental strand, 19022668 - 19022549
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac-gtgataagttgttttaata 461  Q
    ||||| || ||||||||||  ||||| ||||||||| |||||||| || || ||||||| |||| |||  ||||||| |  || |||||||||||| |||    
T  19022668 ttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcata 19022569  T
Q  462 agttctccccaaacaatctca 482  Q
    | |||| ||||||||||||||    
T  19022568 aattct-cccaaacaatctca 19022549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21880186 - 21880269
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||       | | |||||||||||||||| | ||||| | ||||||| ||||||||||| |||||||    
T  21880186 cagtgtaattacaagtgtcggtgtcg-------gacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 22484090 - 22484142
Alignment:
Q  69 gacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||| |||||| || |||| ||||||||||| |||||||    
T  22484090 gacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcat 22484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 33673069 - 33673137
Alignment:
Q  368 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    ||||| ||||||||| |||| |||||||||| ||||||||||| |  ||| ||| ||||||||||||||    
T  33673069 gtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaaaacagtttat 33673137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 45078287 - 45078371
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    |||||||||||||||  ||| || || |||||||||| ||||||||| ||||| ||| || ||||||| |||  |||||||||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttctataagttctcc 45078371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 47177629 - 47177681
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataag 421  Q
    |||| ||||||||| ||||||| ||||||||||||||||||| || |||||||    
T  47177629 tataagctataagctgttttcaaaagctatcttggagaatttatgaaaataag 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 470
Target Start/End: Complemental strand, 48157224 - 48157096
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| ||||| |||| |||||||   ||||||| |||||||   |||||  || |||||||||| ||||||||| ||||| |||    
T  48157224 agataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggaca 48157125  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     |  |||||||||||  ||||| ||||||    
T  48157124 tggcataagttgtttctataagctctccc 48157096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 467
Target Start/End: Original strand, 11048067 - 11048118
Alignment:
Q  416 aataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttct 467  Q
    |||||| ||||||||| ||||||||| || |||||||||||| |||||||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagttgttttgataagttct 11048118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 21560537 - 21560572
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    ||||||||||||||||||||||||||| ||||||||    
T  21560537 cagtgtaattacaagtgtcggtgtcgtatcggtgtc 21560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 26033486 - 26033451
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    |||||||||||||||||||||| |||||||||||||    
T  26033486 cagtgtaattacaagtgtcggtctcgtgtcggtgtc 26033451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 27548229 - 27548308
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataag 421  Q
    ||||||||||||||| |||| ||||  | || ||||||||| ||||||||||||||||||||| || || |||| |||||    
T  27548229 agataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatggagataag 27548308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 40287368 - 40287306
Alignment:
Q  56 gtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttc 119  Q
    |||||||| ||| ||||||||||||||| ||||||||| ||||||| || |||||||| |||||    
T  40287368 gtgtcggtatcg-gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 44615176 - 44615081
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    ||||||| | ||||||||||| || | | |||| ||| ||||||||| |||||||||| || || ||| || |||||||||||| ||||| |||||    
T  44615176 gctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcc 44615081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 46825064 - 46825127
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggag 405  Q
    |||||||||||||||||||| ||||  |||| || |||| | ||||||||||||||||||||||    
T  46825064 agataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggag 46825127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 47177652 - 47177683
Alignment:
Q  173 aagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||||||||||||||    
T  47177652 aagctatcttggagaatttatgaaaataagct 47177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 2334285 - 2334339
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgaca 83  Q
    ||||||||||||||||||||||||||||| ||||||    ||||||||||||||||    
T  2334285 agtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgaca 2334339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 9408358 - 9408324
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    |||||||||||||||||||||||||| ||||||||    
T  9408358 agtgtaattacaagtgtcggtgtcgtatcggtgtc 9408324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 15740442 - 15740380
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaaacaa 477  Q
    ||||||| | ||||||| ||||||||| || |||||||||||| |||||||||  ||||||||    
T  15740442 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttcttgccaaacaa 15740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 469
Target Start/End: Original strand, 30535562 - 30535656
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    |||||||| |||| |||||||||||||  ||||  | || ||||||  ||||||||| ||| |||||  | |||||||||||| |||||||||||    
T  30535562 ctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctcc 30535656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 32425352 - 32425402
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagtt 465  Q
    ||||||| | |||||||||||||| || || ||||||||||||||||||||    
T  32425352 aaataagataaaaacagtttatgagcatgtcataagttgttttaataagtt 32425402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 598272 - 598325
Alignment:
Q  68 cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||| ||||||||| ||||||| | ||||||| ||||||||||| |||||||    
T  598272 cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 441
Target Start/End: Complemental strand, 18749887 - 18749822
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| ||||||||||||||||  ||| || || |||||||||| ||||||| | |||||||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaaca 18749822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 25670636 - 25670567
Alignment:
Q  396 tatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagtt 465  Q
    |||||||||||  || || ||||||| |||||||| ||||| |||| || |||||||||||| |||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagtt 25670567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 27945075 - 27945104
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtc 60  Q
    ||||||||||||||||||||||||||||||    
T  27945075 cagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 421
Target Start/End: Original strand, 32410547 - 32410584
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataag 421  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  32410547 gttttcataagctatcttggggaatttatggaaataag 32410584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 46280355 - 46280290
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||| ||||||||||||||| ||||| ||||||||| |||||||| || || ||||| | ||||||    
T  46280355 tttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 47130847 - 47130802
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaac 429  Q
    |||||||||||||||||||||||| || || ||||||| |||||||    
T  47130847 gttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 1e-22; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 374 - 477
Target Start/End: Original strand, 31624088 - 31624191
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaa 473  Q
    ||||||||| ||||||||| |||||||||||||| || || ||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||| |||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttcttcccaa 31624187  T
Q  474 acaa 477  Q
    ||||    
T  31624188 acaa 31624191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 371 - 430
Target Start/End: Complemental strand, 835324 - 835265
Alignment:
Q  371 tatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||| ||||||||    
T  835324 tatgctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 20368242 - 20368156
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||||||||| |||||||||| || || ||||||| |||||  || ||||||||| || |||||||||||| ||||||||||||    
T  20368242 gttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctccc 20368156  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 441
Target Start/End: Complemental strand, 9093660 - 9093561
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| |||| ||||| ||||||||| ||||||||||||| |||| ||||| ||  | ||||||| ||||||||| |||| ||||    
T  9093660 agataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaaca 9093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 16766731 - 16766825
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatcc-aagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||||||||||||||||||||    | |||| ||||||||| ||||||| | ||||||| ||||| |||||| |||||||    
T  16766731 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaa-tgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 9107395 - 9107359
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    |||||||||||||||||||||||||||||||||||||    
T  9107395 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 9107359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 2455819 - 2455890
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||||||||||||||||||  || |||||||||| |||||| ||||||||  || || |||||||||||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgttt 2455890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 4420652 - 4420723
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||| ||||||||||||||||  || |||||||||| ||||||||| ||||||||| || |||| ||||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 5970133 - 5970069
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggaca 91  Q
    |||||||||||||| ||| ||||||||||||||||||    |||||||| |||||||||||||||    
T  5970133 cagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggaca 5970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 8365542 - 8365450
Alignment:
Q  33 gtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||||||| |||    |||||| |||||||||  |||||| | ||||||| || ||| |||| |||||||    
T  8365542 gtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcat 8365450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 8714014 - 8714078
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggaca 91  Q
    |||||||||||||| ||| ||||||||||||||||||    |||||||| |||||||||||||||    
T  8714014 cagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggaca 8714078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 9522925 - 9523001
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaa 103  Q
    |||||||||||||||||||||||| ||||||||||||    |||||| ||||||||| || |||| | |||||||||    
T  9522925 cagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 34430544 - 34430469
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga 438  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||| || || ||||||| |||||| || ||||||    
T  34430544 tttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 378 - 468
Target Start/End: Complemental strand, 31686431 - 31686341
Alignment:
Q  378 taagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||| |||||||||||||||| ||||||  ||  ||| ||||| ||||||||| |||| |||  || |||||||||||| ||||||||||    
T  31686431 taagctgttttcataagctatcctggagagcttacggacataagctgaaaacagattataaacttgtcataagttgttttgataagttctc 31686341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 32978923 - 32978842
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttca 120  Q
    |||||||||||||||||||||||||       | | |||||||||||||||| ||||||| | |||||||||| |||||||| ||||||    
T  32978923 agtgtaattacaagtgtcggtgtcg-------gacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 2455259 - 2455352
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaataagttctc 468  Q
    ||||||| ||||||||| || ||||||||||| || || ||||||| ||||||||  |||| ||| | || |||||||||||| ||||||||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctc 2455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 439
Target Start/End: Original strand, 2735035 - 2735132
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||||||||||||| ||||| |||| |||||  |||||||| |||||||||||| |||||| | || || || |||||||  |||||||| |||||||    
T  2735035 agataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaa 2735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 439
Target Start/End: Original strand, 14492268 - 14492365
Alignment:
Q  343 agataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||| |||||||||| ||| | || | ||||||||| ||||||||||| |||| | |||| ||| ||||||| || |||||||| ||||||||    
T  14492268 agataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagttatcctagagagtttgtggaaatcagctgaaaacaatttatgaa 14492365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 18367870 - 18367964
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||| | ||||||||||||||||||||||     ||||||||||| ||||  |||||| | || ||||||| |||||||| |||||||    
T  18367870 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 18367964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 34939755 - 34939824
Alignment:
Q  387 ttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||||||||| |||||| ||| |||||||||| |||||||| |||||| ||| || ||||| |||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgttt 34939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 35099024 - 35099089
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||| ||||||| ||||||  |||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  35099024 tttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaa 35099089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 6536602 - 6536678
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||| ||||||||||||||  ||||| | ||||||| ||||||||||| || ||||||| |||||| || |||||||    
T  6536602 tttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaa 6536678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 6909972 - 6909908
Alignment:
Q  347 aaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaattt 410  Q
    |||||||||| ||||| |||| ||||||||||||||  ||||||||||  |||||||||||||||    
T  6909972 aaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaattt 6909908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 11784113 - 11784069
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  11784113 tttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 17241313 - 17241257
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| |||||||||||||| ||| |||||||||| ||||||||  |||||||||    
T  17241313 ttttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaaca 17241257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 738751 - 738664
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataa 462  Q
    |||||||| | ||||||||| ||||||| | || ||   |||||||| | ||||||||||||| |||||| |||||||||||| ||||    
T  738751 ctataagctgatttcataagttatcttgcaaaacttgcagaaataagctaaaaacagtttatggacacgtcataagttgttttcataa 738664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 1497981 - 1498036
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacag 431  Q
    |||||| ||||||||||| ||||||||||||  || || |||||||||||||||||    
T  1497981 tataagaagttttcataaactatcttggagagcttatgaaaataaggtgaaaacag 1498036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 10616795 - 10616689
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataa 462  Q
    |||| ||||| ||||||||| |||||  |||| |||||| ||| |||| |  ||||||  ||||||||| ||||||||| || ||||| |||||| ||||    
T  10616795 ttttcgtataagctataagctgttttt-taagttatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataa 10616697  T
Q  463 gttctccc 470  Q
    ||||||||    
T  10616696 gttctccc 10616689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 21395332 - 21395297
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21395332 agtgtaattacaagtgtcggtgtcgtgtcagtgtcg 21395297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 837288 - 837234
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||||||| ||||||||| ||||||||||||||| || || ||||||| ||||||    
T  837288 gctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 1401097 - 1401139
Alignment:
Q  364 tttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||    
T  1401097 tttagtataagctataagctgttttcataagctatcatggaga 1401139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 1575934 - 1575996
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaaacaa 477  Q
    ||||||| | ||||||| ||||||||| || |||||||||||| |||||||||  ||||||||    
T  1575934 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttcttgccaaacaa 1575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 450
Target Start/End: Original strand, 6647359 - 6647461
Alignment:
Q  349 aataaagtcaaattt-tttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgat 447  Q
    ||||||||||||||  |||| |||| | ||||| | |||||||||||||||||| ||||  || || ||||||| ||||||||  ||||||||| || ||    
T  6647359 aataaagtcaaattactttaatataggttataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcat 6647458  T
Q  448 aag 450  Q
    |||    
T  6647459 aag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 10770699 - 10770609
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||||||||||||| |   ||  |||| |||||||   ||||||||| ||||||  || |||||||| |||||||    
T  10770699 cagtgtaattacaagtgtcggtgtcgtgtcagacacgacacacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttcat 10770609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 24626262 - 24626324
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggag 405  Q
    ||||||| ||||| ||||| |||| |||||| |||||||  ||||||||||||||||||||||    
T  24626262 gataaaacaaagttaaattgtttttgtatattctataagttgttttcataagctatcttggag 24626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 785477 - 785444
Alignment:
Q  34 tgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    |||||| |||||||||||||||||||||||||||    
T  785477 tgtaatcacaagtgtcggtgtcgtgtcggtgtcg 785444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 835305 - 835272
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  835305 ataagctatcttggagaacttatgaaaataagct 835272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 2205652 - 2205595
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||||||||  || |||||||||| |||| | ||||||| ||||    
T  2205652 gttttcataagctatcttggagagcttatggaaataagctgaatatagtttataaaca 2205595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 60
Target Start/End: Complemental strand, 9911553 - 9911524
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtc 60  Q
    ||||||||||||||||||||||||||||||    
T  9911553 cagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 457
Target Start/End: Original strand, 34403891 - 34403936
Alignment:
Q  412 tggaaataaggtgaaaacagtttatgaacacgtgataagttgtttt 457  Q
    |||||||||||||||||||  ||||||||| || ||||||||||||    
T  34403891 tggaaataaggtgaaaacaccttatgaacatgtcataagttgtttt 34403936  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 34430517 - 34430484
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  34430517 ataagctatcttggagaagttatgaaaataagct 34430484  T

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Target: chr2 (Bit Score: 49; Significance: 2e-18; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 28039436 - 28039316
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||||||||| |||| ||||  ||||  ||||||||| |||||||||||| ||||||| || || |||||||||| ||||||||| |||||||||    
T  28039436 agataaaataaagtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaaca 28039337  T
Q  442 cgtgataagttgttttaataa 462  Q
     || |||| ||||||| ||||    
T  28039336 agtcataacttgttttcataa 28039316  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 11513864 - 11513950
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||||||||||||||||||| ||||  |||| ||||||||  |||||||||||||||| ||||||| ||||||||||||| ||||||    
T  11513864 agataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaa 11513950  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 12464577 - 12464491
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||||||||||||| ||||| |||| |||||||||||||||  ||||||||||||||||||||||| || || ||||||| ||||||    
T  12464577 agataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 363 - 462
Target Start/End: Original strand, 680490 - 680589
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataa 462  Q
    |||| ||||| |||||||||  |||||||||||||||||| |||| || || ||||||| |||||||||||||| |||| || ||||| |||||| ||||    
T  680490 ttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataa 680589  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 363 - 441
Target Start/End: Complemental strand, 29628826 - 29628748
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| ||||| ||||||||  ||| ||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||    
T  29628826 tttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaaca 29628748  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 33256706 - 33256834
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | ||||  ||||  ||||||||||||||||||||| ||| || |||   | || ||||||| ||| |||||||||||||||    
T  33256706 agataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaaca 33256805  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || ||||| |||||| ||||| ||||||    
T  33256806 tgtcataagctgttttcataagctctccc 33256834  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 16451118 - 16451213
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaataagttctccc 470  Q
    ||||||| |||||| ||||||||||||||||| |  || ||||||| ||||||||| | |||||| | || |||||||||||| ||||||||||||    
T  16451118 tataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctccc 16451213  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 18066099 - 18066190
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga 438  Q
    ||||||||| ||||| ||||  |||| ||||||||| |||||||||||||||||||||||| ||  | |||||||||||||| || ||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatga 18066190  T

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Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 29316846 - 29316751
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||| |||||||| ||||||||||||||| || |||||||||| |||||| |  ||||||||| || ||||| ||||||  | |||||||||    
T  29316846 ctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttttgttagttctccc 29316751  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 33931674 - 33931563
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||||| |||| ||| |||| ||||| ||||||||| ||||||||||||||| |||||||| |  |||||||||| |||||  |  |||||||||    
T  33931674 agataaaataaggtcagattgtttttgtataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaaca 33931575  T
Q  442 cgtgataagttg 453  Q
     || ||||||||    
T  33931574 tgtcataagttg 33931563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 34652097 - 34652026
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||||||||||||||||||  || |||||||||| ||||||||| ||||| ||| || |||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 34652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 457
Target Start/End: Complemental strand, 44438943 - 44438828
Alignment:
Q  343 agataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | |||| ||| | || |||||| || |||||||| |||| ||||||  || |||||||||| ||||||||| |||||||||    
T  44438943 agataaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaaca 44438844  T
Q  442 cgtgataagttgtttt 457  Q
     || ||||| ||||||    
T  44438843 tgtcataagctgtttt 44438828  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 344 - 465
Target Start/End: Original strand, 33941876 - 33941998
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    ||||||| ||||| ||||| |||| ||||| | |||||   ||||||||||||||||||||||| ||| ||  |||||| ||||| ||| ||||||||      
T  33941876 gataaaacaaagtaaaattgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaactt 33941975  T
Q  443 gtgataagttgttttaataagtt 465  Q
    || |||||||||||| |||||||    
T  33941976 gtcataagttgttttcataagtt 33941998  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 37419777 - 37419871
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||| |||||||||||||||||||    |||  | ||||||||| ||||||| | ||||||| || |||||||| |||||||    
T  37419777 cagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 343 - 439
Target Start/End: Original strand, 41851501 - 41851598
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||| |||||||| ||||| |||| ||||||||||||||  ||||||| ||||||||||||||||||| || || |||| ||| || || |||||||    
T  41851501 agatacaataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaa 41851598  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 482
Target Start/End: Complemental strand, 12313277 - 12313138
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| |||| || || |||| ||   |||| ||||||||||||||||||  || || ||||||||||||| ||  |||||||||    
T  12313277 agataaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaaca 12313178  T
Q  442 cgtgataagttgttttaataagttctccccaaacaatctca 482  Q
     |  ||||| |||||| |||| |||| ||||||||||||||    
T  12313177 tggcataagctgttttcataaattct-cccaaacaatctca 12313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 482
Target Start/End: Complemental strand, 41241236 - 41241097
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||| |||| ||||| |||| |||||||||||||| ||||||| |||| ||||||||| || || || || |||| |||||| || ||||| | |    
T  41241236 agataaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaaaaaagcttatggaaa 41241137  T
Q  442 cgtgataagttgttttaataagttctccccaaacaatctca 482  Q
     || |||| ||||||| | |||||||  |||||||||||||    
T  41241136 ggttataatttgttttcacaagttct-accaaacaatctca 41241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 344 - 470
Target Start/End: Original strand, 8017401 - 8017528
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    ||||||| ||||| ||||| ||||  |||| ||| ||| | |||||||||||||||||||||||| || || ||||| |  |||||||  |||||||||     
T  8017401 gataaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacat 8017500  T
Q  443 gtgataagttgttttaataagttctccc 470  Q
     | ||||| |||||| ||||||||||||    
T  8017501 atcataagctgttttcataagttctccc 8017528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 23058467 - 23058389
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgctt 118  Q
    |||||||||||||||||||||||||||||||||||         ||||||||| ||||||| | ||||||| ||||||||||| ||||    
T  23058467 cagtgtaattacaagtgtcggtgtcgtgtcggtgt---------tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 26769547 - 26769639
Alignment:
Q  33 gtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||| ||||||| |||    |||||| |||||||||  |||||| | ||||||| || |||||||| |||||||    
T  26769547 gtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 344 - 470
Target Start/End: Complemental strand, 36415776 - 36415650
Alignment:
Q  344 gataaaataaagtcaaat-tttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    |||||||||||||||||  |||||  |  ||||||||||| |||||||||||||||| || |||| ||  | ||||||| ||||||||  ||||| |||     
T  36415776 gataaaataaagtcaaacatttttcattgatgctataagctgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacat 36415677  T
Q  443 gtgataagttgttttaataagttctccc 470  Q
    || |||||||||||  ||||||||||||    
T  36415676 gt-ataagttgtttctataagttctccc 36415650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 40682464 - 40682359
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaataagttctccccaaa 474  Q
    ||||||||||||||||||| |||||| ||||| || || ||||||| ||||||||  |||||||| | || ||||| | |||||| ||||||| ||||||    
T  40682464 tataagcagttttcataagatatctt-gagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttct-cccaaa 40682367  T
Q  475 caatctca 482  Q
    ||||||||    
T  40682366 caatctca 40682359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 16353837 - 16353915
Alignment:
Q  352 aaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||||| |||||  |||| ||||||||| ||||| |||||||||||||||||  || || |||||| |||||||||    
T  16353837 aaagtcaaactttttcatataagctataagctgtttttataagctatcttggagatcttgtgaaaataaagtgaaaaca 16353915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 26626860 - 26626938
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| ||||| |||| |||| ||||||||||||||||||| |||| || || ||||||  ||||||||| |||||||||    
T  26626860 ttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaaca 26626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 35485883 - 35486009
Alignment:
Q  343 agataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | ||| | |||| ||||||||  ||||| |||||||||| || |||   | ||||||| || ||||||||| |||||||||    
T  35485883 agataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaaca 35485982  T
Q  442 cgtgataagttgttttaataagttctc 468  Q
      | |||||||| |||| |||||||||    
T  35485983 tatcataagttgctttagtaagttctc 35486009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 3235483 - 3235390
Alignment:
Q  347 aaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac 440  Q
    |||||||||||||| | |||  ||||  |||||||| |||||||||  |||||||| | | ||| |||||||||| ||||||||| ||||||||    
T  3235483 aaaataaagtcaaactgtttcatataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatgaac 3235390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 430
Target Start/End: Complemental strand, 7103587 - 7103498
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagtttt-cataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||||||| | ||||| |||| ||||||||| ||||| ||||||||||||| |||| ||| || ||||||| | ||||||    
T  7103587 agataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaaca 7103498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 30717555 - 30717461
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||| |||||||||| |||||    |||||| ||| |||||  |||| | | |||||||||| |||||||| |||||||    
T  30717555 cagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcat 30717461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 35379078 - 35378993
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    |||||||||||||||||||||||  || || ||||||| ||||||||  ||||||||| || || || |||||| ||||| |||||    
T  35379078 gttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctcc 35378993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 40279275 - 40279332
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||||||||| |||||||| || || |||| || |||||||||||||||||||    
T  40279275 gttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 40279345 - 40279402
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||||||||| |||||||| || || |||| || |||||||||||||||||||    
T  40279345 gttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 40279415 - 40279468
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    ||||||||||||||| |||||||| || || ||||||| |||||||||||||||    
T  40279415 gttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatg 40279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 2438744 - 2438661
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||       | | |||||||||||||||| ||||||| | ||||||| || |||||||| |||||||    
T  2438744 cagtgtaattacaagtgtcggtgtcg-------gacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 5759674 - 5759594
Alignment:
Q  348 aaataaagtc-aaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaa 427  Q
    |||||||||| |||| |||| ||||||||||||||| |||||||||||||||  |||||  ||| || ||||||| |||||    
T  5759674 aaataaagtctaaatgttttcgtatatgctataagctgttttcataagctattctggagggtttgtgaaaataagctgaaa 5759594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 43065512 - 43065428
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||||||| |||| ||||||  || | |||||||| |||||||| |||||| ||| || |||||||||||| ||||| ||||    
T  43065512 gttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 750680 - 750735
Alignment:
Q  386 tttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||||||| || || ||||||| | ||||||| |||||||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaaca 750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 1056456 - 1056361
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga 438  Q
    ||||||||||||  ||||||||||  ||||  || |||||  |||||||||||||||||| ||| ||| | |||||||| |||||| || ||||||    
T  1056456 agataaaataaatacaaattttttcatataacctgtaagctattttcataagctatcttgaagagtttatagaaataagctgaaaatagattatga 1056361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 1939394 - 1939323
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgtt 455  Q
    |||||||||||||||  ||||||  || |||||||||| ||||||||| ||||| ||| || ||||||||||    
T  1939394 gttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 439
Target Start/End: Original strand, 3611234 - 3611289
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||| |||||||||||||||| || || ||||||| | |||||||||||||||    
T  3611234 gttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatgaa 3611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 4882721 - 4882686
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    |||||||||||||||||||| |||||||||||||||    
T  4882721 cagtgtaattacaagtgtcgatgtcgtgtcggtgtc 4882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 470
Target Start/End: Complemental strand, 26857165 - 26857086
Alignment:
Q  391 taagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||||||||| ||| |||||||||| |||||| ||  | |||||  || |||||||||||| ||||||| ||||    
T  26857165 taagctatcttggagagtttgtggaaataagctgaaaatagactctgaacctgtcataagttgttttcataagttttccc 26857086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 441
Target Start/End: Original strand, 40279167 - 40279262
Alignment:
Q  347 aaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||| |||| ||||| |||| ||||| | ||||||  ||||||||||||||| |||||||| || || |||| || |||||| ||||||||||||    
T  40279167 aaaatgaagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaaca 40279262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 41042083 - 41042012
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||| || ||||||||||| ||| |||||||||| ||||||||| | ||| ||| || |||||||||||    
T  41042083 ttttcatgagttatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgttt 41042012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 348 - 441
Target Start/End: Original strand, 1625871 - 1625965
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||| ||||| |||| ||||| | ||||||  |||||||||||||||||||||||| ||  | |||| || ||||||||  |||||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaaca 1625965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 1742102 - 1742008
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||| |||||||||| ||||| || ||| ||| |||||||||| |||| | || ||||| ||| || |||||||||||  ||||| ||||||    
T  1742102 tataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctccc 1742008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 3227745 - 3227691
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga 438  Q
    ||||||||||||||| |||||||  ||||| ||||||| |||||||| |||||||    
T  3227745 gttttcataagctattttggagagattttgaaaataagctgaaaacaatttatga 3227691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 9478265 - 9478379
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||| ||||| | ||||  |||| |||||| || || ||| ||||||||| |||||| ||  ||||| |||| ||||||||| ||||| |||    
T  9478265 agataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggagagttgatggaagtaagatgaaaacagcttatggaca 9478364  T
Q  442 cgtgataagttgttt 456  Q
     || |||||||||||    
T  9478365 tgtaataagttgttt 9478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 38809362 - 38809420
Alignment:
Q  412 tggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||| ||||||||| |||| |||| || ||||| || ||||||||||||||||    
T  38809362 tggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctccc 38809420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 43141837 - 43141951
Alignment:
Q  343 agataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| |||||||||||| |||   |||| ||||||||  |||||||||||||||| || ||| ||| |||||||||  ||||||||  |||||  ||    
T  43141837 agataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggca 43141936  T
Q  442 cgtgataagttgttt 456  Q
     || |||||||||||    
T  43141937 tgtcataagttgttt 43141951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 4606939 - 4606972
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagct 4606972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 9174814 - 9174899
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaa 459  Q
    |||||||| ||||||||||||||||||  |||  || || ||||||| |||||| || |||||||| | || ||||||||||||||    
T  9174814 ctataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgttttaa 9174899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 11223888 - 11223795
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||| ||| |||||||    |||||| |||| |||| ||||||| | ||||||  || |||||||| |||||||    
T  11223888 cagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 468
Target Start/End: Original strand, 13220472 - 13220525
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||| | ||||||| ||||||||| || |||||||||||| ||||||||||    
T  13220472 aaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctc 13220525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 16867737 - 16867802
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||  ||||||| |||||||||||||||  || |||||||||| ||||||||  |||||||    
T  16867737 gctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 16867802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 33319895 - 33319830
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||| |||||| |||||| | |||||||||| ||||||||||||| || || ||||||| ||||||    
T  33319895 tttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 37497185 - 37497238
Alignment:
Q  68 cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||| || || ||||||||| ||||||| ||||||||||| |||||||    
T  37497185 cgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcat 37497238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 39073793 - 39073728
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    ||||||||||| || ||||| |||| |||||||||||||| | |||| ||||||||| ||||||||    
T  39073793 agataaaataacgttaaattgtttttgtatatgctataagtaatttttataagctatattggagaa 39073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 43279604 - 43279491
Alignment:
Q  371 tatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca-cgtgataagttgttttaataagttctc- 468  Q
    |||||||||||  ||||| ||||||||| |||||||| || || ||||||| |||||| || ||||||| |  || ||||| |||||| |||| |||||     
T  43279604 tatgctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctct 43279505  T
Q  469 cccaaacaatctca 482  Q
    |||||||| |||||    
T  43279504 cccaaacagtctca 43279491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 469
Target Start/End: Original strand, 43504738 - 43504844
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataa 462  Q
    |||||||| | ||||||||  ||||| |||||||||||||||||| || |||||||||| ||||||||| |||| |||| ||  ||||||||||| || |    
T  43504738 ttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcatca 43504837  T
Q  463 gttctcc 469  Q
    |||||||    
T  43504838 gttctcc 43504844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 6509407 - 6509313
Alignment:
Q  343 agataaaataaagtcaaatttt-ttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    |||||||||||||||||||| | ||  |||| ||||||||| |||||||||||||||| ||||||  || | ||||||||||||||| |||||||    
T  6509407 agataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttat 6509313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 470
Target Start/End: Complemental strand, 42215411 - 42215282
Alignment:
Q  342 gagataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac 440  Q
    ||||||||||||||||||| | |||| |||||  |||||| |  |||||||| |||||| ||||||  || || ||||||| ||||||||| ||||||||    
T  42215411 gagataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaac 42215312  T
Q  441 acgtgataagttgttttaataagttctccc 470  Q
    | || ||||| |||||| || |||||||||    
T  42215311 aagtcataagctgttttcattagttctccc 42215282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 22652015 - 22652104
Alignment:
Q  36 taattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||||||||    |||||  ||||||||| ||||||| | ||||||| || |||||||| |||||||    
T  22652015 taattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 2482831 - 2482927
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac 440  Q
    |||||||||||||||||| | |||| ||||| ||||||||| ||||||||  ||||||||||| || || | |||||||| ||||||||| ||||||||    
T  2482831 agataaaataaagtcaaaatgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatgaac 2482927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 27028823 - 27028894
Alignment:
Q  368 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||||||||| |||||||||||||||||||||||  || || ||||||| |||||| || |||||||    
T  27028823 gtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 430
Target Start/End: Complemental strand, 28769441 - 28769355
Alignment:
Q  345 ataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||| |||||||| | ||||  |||| ||||||||| ||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  28769441 ataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 8062321 - 8062397
Alignment:
Q  368 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgt 444  Q
    ||||| ||||||||| |||||||||||||||||| ||||  || |||||||||| ||||||||  ||||| ||||||    
T  8062321 gtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatggacacgt 8062397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 439
Target Start/End: Complemental strand, 37353348 - 37353256
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||| ||||| |||| || |||||||||||| |||||| ||||||||||| ||||  || || ||||||  |||||||||||||||||    
T  37353348 aaataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaa 37353256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 369 - 456
Target Start/End: Original strand, 30013211 - 30013298
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    |||| ||||||||| |||||||||||||||| || |||| |  |||||||||| |||||| |||||| | |||| ||||||| |||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggacacttgataagatgttt 30013298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 36643954 - 36643883
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||||||||||| |||||||  | |||||||||| |||||| |||||| ||||  ||||||||||||||    
T  36643954 ttttcataagctatcatggagaacgtatggaaataagctgaaaatagtttacgaacgtgtgataagttgttt 36643883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 7918508 - 7918422
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||| ||||||||||||||||  || | |||||||| || |||||| ||||||||| ||  ||||||||||| ||||| ||||||    
T  7918508 gttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctccc 7918422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 468
Target Start/End: Original strand, 10114456 - 10114582
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga-aca 441  Q
    |||||||||||  | || | |||| ||||| ||||||||| |||||||| |||||| ||||||||  | || ||||||| |||||||||  ||||| | |    
T  10114456 agataaaataagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatgataaa 10114555  T
Q  442 cgtgataagttgttttaataagttctc 468  Q
     || |||||||||||| ||||||||||    
T  10114556 tgttataagttgttttcataagttctc 10114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 29168140 - 29168082
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataag 421  Q
    |||| ||||||||||||||| |||||| | ||||||||||||||| || ||||||||||    
T  29168140 tttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataag 29168082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 407
Target Start/End: Complemental strand, 32841393 - 32841347
Alignment:
Q  361 ttttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  32841393 tttttttgtataagctataagctgttttcataagctatcttggagaa 32841347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 441
Target Start/End: Complemental strand, 33714339 - 33714241
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | ||| ||| |  ||||||||  |||||||||||||||| |||||  || |  ||||||| ||||||||| |||||||||    
T  33714339 agataaaataaagtcaaactattttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 441
Target Start/End: Original strand, 1930035 - 1930100
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| |||||||||||||||||||| ||  || || ||||||| ||||||||| |||||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaaca 1930100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 29510329 - 29510235
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||| ||||||||||||||||||| ||||||||||||    |||| | ||||||||| |||||||   ||||||| || |||||||| |||||||    
T  29510329 cagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 7918875 - 7918783
Alignment:
Q  345 ataaaataaagtcaaattttttagta-tatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    |||||||||||| |||||||||  |  || ||||||||  ||||||||||||||||||| |||  || |||||||||| ||||||||| ||||    
T  7918875 ataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat 7918783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 376 - 456
Target Start/End: Complemental strand, 11569527 - 11569447
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||||| |||||||||||||||| ||||||  ||||| ||||||| ||||||||  ||||| ||| || ||||| |||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgttt 11569447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 31705078 - 31705146
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatg 437  Q
    |||| ||||||||| ||||||||||||| || | |||| ||| |||||||||| ||||||||| |||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatg 31705146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 2572080 - 2572045
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2572080 agtgtaattacaagtgtcggtgtcgtgtctgtgtcg 2572045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 3537001 - 3536950
Alignment:
Q  390 ataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||| |||||||||||| || |||||||||| |||||||| ||||||||||    
T  3537001 ataagatatcttggagaacttatggaaataagctgaaaacaatttatgaaca 3536950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 25566875 - 25566910
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25566875 cagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 926511 - 926569
Alignment:
Q  412 tggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||| ||||||| | ||||||||| || |||||||||||| |||| |||||||    
T  926511 tggaaataagctgaaaacggcttatgaacatgtcataagttgttttgataaattctccc 926569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 3537135 - 3537046
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcata--agctatcttggagaatttttggaaataaggtgaaaac 429  Q
    |||||||||||||||||||| |||| ||||| |||||| |  ||| |||||  || |||||||||||| || |||||||||| |||||||    
T  3537135 agataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaataagctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 420
Target Start/End: Original strand, 4558764 - 4558842
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataa 420  Q
    |||||||||||||| ||||| ||||  |||||||||||||| |||| ||||||||||| | ||||  || |||||||||    
T  4558764 agataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataa 4558842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 11183543 - 11183637
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||||| ||||||| |||||| | ||||||  || |||||||||| ||||||||| ||||  |||  | |||||||||||| ||||| ||||    
T  11183543 gctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctctc 11183637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 14929200 - 14929150
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagttt 434  Q
    ||||||||||||||| ||| |||  ||||||||||||| ||||||||||||    
T  14929200 gttttcataagctatgttgcagagcttttggaaataagctgaaaacagttt 14929150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 30277315 - 30277261
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||| |||||||||||||||| | |||| ||| |||||||||| ||||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaaca 30277261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 31916617 - 31916651
Alignment:
Q  170 tataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||||||||| ||||||||||    
T  31916617 tataagctatcttggagaatttataaaaataagct 31916651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 2488029 - 2487984
Alignment:
Q  425 aaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||| |||||| || |||||||||||| ||||||||||||    
T  2488029 aaaacagtttttgaacatgttataagttgttttcataagttctccc 2487984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 24558840 - 24558917
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac 440  Q
    |||| ||||| ||||||||  ||||||||||||||||||||||| ||  || ||||||| |||| | || ||||||||    
T  24558840 ttttcgtataagctataagttgttttcataagctatcttggagacttaatgtaaataagttgaacatagcttatgaac 24558917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 27067322 - 27067289
Alignment:
Q  34 tgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    |||||||||||||||| |||||||||||||||||    
T  27067322 tgtaattacaagtgtcagtgtcgtgtcggtgtcg 27067289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 38602327 - 38602388
Alignment:
Q  370 atatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacag 431  Q
    ||||||||||||| ||||| |||||||||  |||||||||| || |||||||  ||||||||    
T  38602327 atatgctataagctgtttttataagctatactggagaatttgtgaaaataagccgaaaacag 38602388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 27505281 - 27505368
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||||||||||||||||||||  || | |||||| ||||||||| ||||||||| ||||||| || |||||||| |||||||    
T  27505281 agtgtaattacaagtgtcggtgtcgtgtc--tgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 14209147 - 14209241
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| |||||||||||||||||    |||||| ||| ||||||||||| |   ||||||||||||||||||| |||||||    
T  14209147 cagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcat 14209241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 39602313 - 39602193
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    |||||| ||||||| ||||| ||  ||||| | ||||||| |||||||||||||||||| ||||| || || ||||||| |||||||| ||||||||||     
T  39602313 agataacataaagttaaattgttgcgtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacat 39602214  T
Q  443 gtgataagttgttttaataag 463  Q
    || ||||| ||| || |||||    
T  39602213 gtcataagctgtcttcataag 39602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 41961673 - 41961581
Alignment:
Q  33 gtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||||||| |||    |||||| |||||||||  |||||| | ||||||| ||||||||||| |||||||    
T  41961673 gtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 41961581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 470
Target Start/End: Original strand, 37273142 - 37273228
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||  ||||| ||| || |||||||||||  ||||| ||||||    
T  37273142 gttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctccc 37273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 470
Target Start/End: Original strand, 21367637 - 21367762
Alignment:
Q  347 aaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgt 444  Q
    |||||||||| ||||| |||| |||||   ||||||  |||||||||||||||||||||||| || || ||||||| ||||||||| || ||||| | ||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgt 21367736  T
Q  445 gataagttgttttaataagttctccc 470  Q
     ||||| |||||| ||||||||||||    
T  21367737 cataagctgttttcataagttctccc 21367762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 2201094 - 2201208
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||| ||||||||| | ||||  |||| ||||||||| |||||||| |||||||||||| | |||  ||||| ||| |||||| ||||||||||||    
T  2201094 agataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaaca 2201193  T
Q  442 cgtgataagttgttt 456  Q
      | |||||||||||    
T  2201194 tatcataagttgttt 2201208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 456
Target Start/End: Original strand, 41452525 - 41452603
Alignment:
Q  378 taagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttt 456  Q
    ||||| |||||||||||||||| ||||||| || |||||||||||||||||||| ||||  |||  | |||||||||||    
T  41452525 taagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgttt 41452603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 345 - 430
Target Start/End: Original strand, 2719437 - 2719522
Alignment:
Q  345 ataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||| ||||| ||| || || ||||||| | |||||||||||||||||||||||| || || ||||||| ||| ||||    
T  2719437 ataaaataaagtgaaattgttttgtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaaca 2719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 35394560 - 35394503
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||||||||||||| ||||||| || ||||||| ||||||||| |||||||||    
T  35394560 gttttcataagctatcttgaagaatttatgaaaataagttgaaaacagcttatgaaca 35394503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 374 - 441
Target Start/End: Complemental strand, 45264438 - 45264371
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||  |||||||||||| ||||||| ||||  || ||||||||||||||||| |||||||||    
T  45264438 gctataagctattttcataagctctcttggaaaattggtgaaaataaggtgaaaacagcttatgaaca 45264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 348 - 470
Target Start/End: Original strand, 52618974 - 52619097
Alignment:
Q  348 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtga 446  Q
    ||||||||| ||||| ||||  |||| | ||||||| ||||||| ||||||||||| |||  || || |||||||||||||| || ||||||||| || |    
T  52618974 aaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtca 52619073  T
Q  447 taagttgttttaataagttctccc 470  Q
    ||| ||||||| || |||| ||||    
T  52619074 taaattgtttttattagttttccc 52619097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 14145878 - 14145940
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttgga 404  Q
    |||||||||||||| ||||| |||| ||||||||||||||   ||||||||||||||||||||    
T  14145878 agataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttgga 14145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 407
Target Start/End: Complemental strand, 18405916 - 18405870
Alignment:
Q  361 ttttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||    
T  18405916 tttttttgtatatgctataagttgttttcataagctatcttggagaa 18405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 385 - 467
Target Start/End: Original strand, 45541580 - 45541662
Alignment:
Q  385 ttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttct 467  Q
    |||||||||||||||||||| || || ||  |||||  ||||||||| ||||||||| || ||||| |||||| |||||||||    
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 46886764 - 46886718
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataa 420  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  46886764 gctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 469
Target Start/End: Complemental strand, 49465767 - 49465642
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    |||||||||||||| || |||||| ||||| |||| | |  |||||||||||||||  ||||||| || |||||||||| | |||| |  | |||||||     
T  49465767 agataaaataaagttaatttttttcgtata-gctaaatgttgttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacat 49465669  T
Q  443 gtgataagttgttttaataagttctcc 469  Q
    || ||||| |||||| |||||||||||    
T  49465668 gtaataagctgttttcataagttctcc 49465642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 4987316 - 4987230
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgt----cgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    |||||||||||||||||| |||| |||||||||||    | |||||| ||||||||| ||||||| | ||||||| || ||||||||    
T  4987316 cagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccg 4987230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 441
Target Start/End: Original strand, 20669172 - 20669237
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| |||||||||||||||||||||||  || || |||||||  |||||||| |||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaaca 20669237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 29508514 - 29508567
Alignment:
Q  68 cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||||| |||||||    
T  29508514 cgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 30956730 - 30956665
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||||||||||| ||||| |||| ||||| ||||||||  ||||||| ||||||||||||||||    
T  30956730 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30956665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 30972542 - 30972477
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||||||||||| ||||| |||| ||||| ||||||||  ||||||| ||||||||||||||||    
T  30972542 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30972477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 34185148 - 34185054
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||||||||||||||  |||||     ||||  ||||||||| ||||||| | ||||||| || |||||||| |||||||    
T  34185148 cagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 34185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 428
Target Start/End: Complemental strand, 35959559 - 35959474
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    ||||||||||||| ||||| |||| ||||||||| ||||  ||||  ||||||||| || ||||||||||| ||||||| ||||||    
T  35959559 gataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 469
Target Start/End: Complemental strand, 41644515 - 41644422
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    ||||||| |||||||||||||||| | ||||  ||  ||||||||| ||||||||| ||||||| | ||   |||||||||| |||||||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcc 41644422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 12862351 - 12862287
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||||||| | | ||||| ||| ||||||||||||||  ||||||||||||||| ||||||||    
T  12862351 agataaaatagatttaaattgttttgtatatgctataagttgttttcataagctatattggagaa 12862287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 21574457 - 21574584
Alignment:
Q  343 agataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| ||||  |||| ||||||| |  |||| |||||||| | ||||||  || |||||||||| | ||| ||| |||||||||    
T  21574457 agataaaataaagttaaattgtttacatataagctataa-ctttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaaca 21574555  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || |||||||||||| ||||| ||||||    
T  21574556 tgtcataagttgttttcataagctctccc 21574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 23808120 - 23808040
Alignment:
Q  390 ataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||||||||||||| ||| || ||||||| |||||||| ||| |||||| || ||||| || ||| ||||||| ||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttccc 23808040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 438
Target Start/End: Complemental strand, 24887387 - 24887291
Alignment:
Q  343 agataaaataaagtcaaatttt-ttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatga 438  Q
    |||||||||||||||||| | | ||  |||| |||| |||| |||||||||||||||| ||||||  || ||| |||||| ||||||||||| ||||    
T  24887387 agataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacagttaatga 24887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 30573976 - 30573892
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    |||||||||||||||||||||||  |  || | ||||| ||||||||| ||||||||| |  |||| ||||||| ||||||||||    
T  30573976 gttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 36887512 - 36887596
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    |||||||||||| |||||| |||| || || ||||||| ||||||||  ||||||||| || | ||||| |||| ||||||||||    
T  36887512 gttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagttcttttgataagttctc 36887596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 469
Target Start/End: Original strand, 1816549 - 1816676
Alignment:
Q  343 agataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||||| | |||| ||||| | ||||||  |||||||||||||||  ||||||  || |  ||||||| |||||||||  |||||| |    
T  1816549 agataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaa 1816648  T
Q  442 cgtgataagttgttttaataagttctcc 469  Q
     || ||||||| |||| ||| |||||||    
T  1816649 tgtcataagttattttcatatgttctcc 1816676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 404
Target Start/End: Complemental strand, 21872376 - 21872313
Alignment:
Q  342 gagataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttgga 404  Q
    |||||||||||| |||||||||||| | |||| ||||||||  |||||||||||||||| ||||    
T  21872376 gagataaaataaggtcaaatttttttgatataagctataagttgttttcataagctatcctgga 21872313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 25183060 - 25182965
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtg-aaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||||| |||||||||||||||| |||| ||||| |||||||| | || |||| || ||||| | | || |||||||||||| ||||| ||||    
T  25183060 gctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaaaatagcttatggatatgtcataagttgttttcataagctctc 25182965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 27896230 - 27896147
Alignment:
Q  386 tttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctcc 469  Q
    ||||||||||||||||||||| |||||| ||||||| |||  ||| |||||||||  || || || |||||| |||| ||||||    
T  27896230 tttcataagctatcttggagagtttttgaaaataagctgacgacaatttatgaacttgtcatgagctgttttcataaattctcc 27896147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 441
Target Start/End: Complemental strand, 36783438 - 36783339
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| ||||  ||||  |||| ||| ||||||||||||||| |||||| | || || | ||||| ||||||||| |||||||||    
T  36783438 agataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatgaatataagctgaaaacagcttatgaaca 36783339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 44747486 - 44747427
Alignment:
Q  368 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaa 427  Q
    ||||| ||||||||| ||||||||||||||||||||| || || || ||||||| |||||    
T  44747486 gtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 457
Target Start/End: Original strand, 50952347 - 50952414
Alignment:
Q  390 ataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgtttt 457  Q
    |||| ||||||||||||  || |||||||||| | ||||||||||||||||| || ||||| ||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgtttt 50952414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 1509574 - 1509608
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    |||||||||||||||||||||||||| ||||||||    
T  1509574 agtgtaattacaagtgtcggtgtcgtttcggtgtc 1509608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 2825150 - 2825196
Alignment:
Q  160 aagttatttctataagctatcttggagaatttatgaaaataagctta 206  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||    
T  2825150 aagttattttcataagctatcttggagagcttatgaaaataagctta 2825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 14829727 - 14829757
Alignment:
Q  35 gtaattacaagtgtcggtgtcgtgtcggtgt 65  Q
    |||||||||||||||||||||||||||||||    
T  14829727 gtaattacaagtgtcggtgtcgtgtcggtgt 14829757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 23808123 - 23808089
Alignment:
Q  168 tctataagctatcttggagaatttatgaaaataag 202  Q
    |||||||||||||||||||| ||||||||||||||    
T  23808123 tctataagctatcttggagagtttatgaaaataag 23808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 30443859 - 30443945
Alignment:
Q  343 agataaaataaagtcaaattt-tttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    ||||||||| |||| |||||  ||| ||||||||||||||| ||||| |||| |||| |||||||| || || ||||||| ||||||    
T  30443859 agataaaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 32582742 - 32582796
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||| |||| ||||||||||||||| |||||||| || |||||||||| ||||||    
T  32582742 gctacaagctgttttcataagctattttggagaacttatggaaataagttgaaaa 32582796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 2719482 - 2719515
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  2719482 ataagctatcttggagaacttatgaaaataagct 2719515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 14216926 - 14217020
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| |||||||||  ||||||    |||||| ||| |||||  ||||||   ||||||| ||||||||||| |||||||    
T  14216926 cagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14217020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 14223055 - 14223149
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| |||||||||  ||||||    |||||| ||| |||||  ||||||   ||||||| ||||||||||| |||||||    
T  14223055 cagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14223149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 21367681 - 21367714
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  21367681 ataagctatcttggagaacttatgaaaataagct 21367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 26878125 - 26878182
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||| |||||||||| ||||||  || ||||| | |||||||||||||||||||    
T  26878125 gttttcattagctatcttgaagaattaatgaaaatatgctgaaaacagtttatgaaca 26878182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 33405244 - 33405171
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaatttttggaa-ataaggtgaaaacagtttatgaaca 441  Q
    |||| ||||||||| ||||||||||||||||||| |||| || || ||  ||||  ||||||||||||||||||    
T  33405244 tataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaaca 33405171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 36507194 - 36507109
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    ||||||||| |||| |||||   | ||||| ||||||||||| |||||||| |||| ||||||||||| |  ||||||| ||||||    
T  36507194 agataaaatgaagtaaaattacgttgtataagctataagcagctttcataaactattttggagaatttataaaaataagctgaaaa 36507109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 38462247 - 38462304
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatc 399  Q
    |||||||||||||||||| | ||||  |||||||||||| | ||||||||||||||||    
T  38462247 agataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatc 38462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 53789549 - 53789468
Alignment:
Q  358 aaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    |||| |||| ||||||||||||||  ||| |||||||||||| ||||||| || || || |||| |||||| || |||||||    
T  53789549 aaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 1e-16; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 17368675 - 17368768
Alignment:
Q  375 ctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    |||||||  |||||||||||||||||||||||  || |||||||||| ||||||| |  |||||||| || |||||||||||| ||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 12425537 - 12425625
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||||||||||||||| || || ||||||| ||||||||    
T  12425537 agataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 4619718 - 4619801
Alignment:
Q  387 ttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| ||||||||| || || ||||||||| ||||| ||||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctccc 4619801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 384 - 467
Target Start/End: Original strand, 7674656 - 7674739
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttct 467  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||||  |||| |||| || |||||||||||  |||||||||    
T  7674656 gttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttct 7674739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 374 - 441
Target Start/End: Original strand, 7984967 - 7985034
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||  |||||||||||||||||||||||||| || ||||||| ||||||||| |||||||||    
T  7984967 gctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 482
Target Start/End: Complemental strand, 37611277 - 37611180
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaaacaatctca 482  Q
    |||||||||||||||||||||||  || |||||||||  ||||||||| ||||||||| || | |||||||||| ||||| ||| | ||||||||||||    
T  37611277 gttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctct-ctcaaacaatctca 37611180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 384 - 482
Target Start/End: Complemental strand, 37788007 - 37787910
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccccaaacaatctca 482  Q
    |||||||||||||||||||||||  || |||||||||  ||||||||| ||||||||| || | |||||||||| ||||| ||| | ||||||||||||    
T  37788007 gttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctct-ctcaaacaatctca 37787910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 21542064 - 21542150
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    |||||||||||||||||||||||||||||||||||||    |||||| ||||||||| ||||||| | | |||||||| | ||||||    
T  21542064 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccg 21542150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 32703378 - 32703286
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    |||||||||||||| ||||| |||  | |||||||||||  ||||||||||||||||| ||||||||| |  ||||||| ||||||||||||||    
T  32703378 agataaaataaagttaaattatttc-tgtatgctataagttgttttcataagctatctaggagaatttataaaaataagctgaaaacagtttat 32703286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 377 - 441
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  377 ataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||| |||||||||||||||||||||||| || || ||||||| ||||||||| |||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 430
Target Start/End: Complemental strand, 10272535 - 10272447
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    ||||||||| |||||||||| |||| ||||| ||||||||  |||||||||||| |||||||||| ||| || ||||||| ||||||||    
T  10272535 agataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaaca 10272447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 344 - 456
Target Start/End: Original strand, 36318740 - 36318854
Alignment:
Q  344 gataaaataaagtcaaatt--ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||||| ||  |||| ||||| | | ||||  ||||||||||||||||||||||||||| || ||||||| ||||||||| |||  || |    
T  36318740 gataaaataaagtcaatttgttttttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagcttaacaaga 36318839  T
Q  442 cgtgataagttgttt 456  Q
     || |||||||||||    
T  36318840 tgtaataagttgttt 36318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 39105451 - 39105574
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaac-acgtgataagttgttttaata 461  Q
    |||| ||||| ||||||| | |||||||||||||||||||||||| || || ||||||| | |||| || |||||||| | || ||||| |||||| |||    
T  39105451 ttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcata 39105550  T
Q  462 agttctccccaaacaatctcataa 485  Q
    | ||||||| ||| | ||||||||    
T  39105551 aattctcccaaaaaagtctcataa 39105574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 21522784 - 21522870
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    |||||||||||||| ||||||||||||||||||||||    |||||| |||||| || ||||||| | |||||||||  ||||||||    
T  21522784 cagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccg 21522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 21533350 - 21533436
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    |||||||||||||| ||||||||||||||||||||||    |||||| |||||| || ||||||| | |||||||||  ||||||||    
T  21533350 cagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccg 21533436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 32172619 - 32172747
Alignment:
Q  343 agataaaataaagtcaaattttttag-tatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||||| ||||||| || ||||  |||| ||||||||| |||||||||||||||| || |||| |  |||||||||| ||||||  | ||||| |||    
T  32172619 agataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggaca 32172718  T
Q  442 cgtgataagttgttttaataagttctccc 470  Q
     || |||||||||||  ||||| ||||||    
T  32172719 tgtcataagttgtttccataagctctccc 32172747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 343 - 441
Target Start/End: Complemental strand, 9202852 - 9202753
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||||||||| ||||| ||||  |||| || |||||| ||||||||||| ||||||| |||| || || ||||||| || |||||| |||||||||    
T  9202852 agataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaaca 9202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 436
Target Start/End: Original strand, 14295472 - 14295566
Alignment:
Q  343 agataaaataaagtcaaa-ttttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    |||||||||||||||||| | ||||  |||| ||||||||| |||||| ||||||||| ||||||  |||| ||| |||| ||||||||| ||||    
T  14295472 agataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttat 14295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 28413343 - 28413289
Alignment:
Q  387 ttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||| ||||||||||| ||| |||||||||| ||||||||| |||||||||    
T  28413343 ttcataagttatcttggagagtttatggaaataagctgaaaacagcttatgaaca 28413289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 28776980 - 28777058
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||| |  || ||||||| | |||| ||||| ||||||    
T  28776980 ttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatagtttttgaaca 28777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 32942611 - 32942649
Alignment:
Q  369 tatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaa 32942649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 7984983 - 7985016
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||||||||||||||||    
T  7984983 ataagctatcttggagaatttatgaaaataagct 7985016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 17088320 - 17088400
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    ||||| ||||||||||||  |||||||||||||||| | ||| ||||||||| ||||||| | ||||||| || ||||||||    
T  17088320 agtgtgattacaagtgtcactgtcgtgtcggtgtcg-gtcacgtgtccgacaccgggacacgcctaatccgaggagtgtccg 17088400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 441
Target Start/End: Original strand, 34160731 - 34160796
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    |||||||  ||||||| || |||||||||||| || || ||||||| |||||||||||||||||||    
T  34160731 tataagctattttcattagatatcttggagaacttatgaaaataagctgaaaacagtttatgaaca 34160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 430
Target Start/End: Original strand, 36325977 - 36326065
Alignment:
Q  344 gataaaataaagtcaaatt--ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||||||||||||||| ||  |||| ||||| | ||||||  | |||| |||||||||||||||||||| || ||||||| ||||||||    
T  36325977 gataaaataaagtcaatttgttttttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaaca 36326065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 39698575 - 39698669
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| |||||||||||||||||    |||||  | ||||||| || |||| | ||||||| || |||||||| |||||||    
T  39698575 cagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 467
Target Start/End: Complemental strand, 6587190 - 6587086
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataa 462  Q
    |||| ||||| ||||||||  |||||||||||||||  ||||||| || || ||||||| || |||||| ||||||||  || ||||| ||||||  |||    
T  6587190 ttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgtttttttaa 6587091  T
Q  463 gttct 467  Q
    |||||    
T  6587090 gttct 6587086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 11707055 - 11707147
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||| ||||||||||||||||||| |||  ||||| ||||||| ||||||||  |||| |||| || ||||  | |||| ||||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataatctattttgataagttctc 11707147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 31084360 - 31084437
Alignment:
Q  34 tgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacatgtccgacatcgggacatgactaatccaagaagtgtccg 113  Q
    ||||||||||||||||| ||||||||||  | | |||||| |||||||||  |||||||| ||||||| || ||||||||    
T  31084360 tgtaattacaagtgtcgatgtcgtgtcg--gacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccg 31084437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 32372591 - 32372655
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaa 407  Q
    |||||||||||||  |||| |||| ||||||||||||||| ||||||| ||| ||||||||||||    
T  32372591 gataaaataaagttgaattgtttttgtatatgctataagctgttttcacaagttatcttggagaa 32372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 37328869 - 37328833
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg 67  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37328869 cagtgtaattacatgtgtcggtgtcgtgtcggtgtcg 37328833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 38047959 - 38047895
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    |||||||||||||||||||| ||||  ||||| ||||| || |||||||||||||||| ||||||    
T  38047959 agataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggaga 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 6593266 - 6593393
Alignment:
Q  343 agataaaataaagtcaaattttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacac 442  Q
    |||||||||||||| ||||| ||  ||||| ||||||||| ||||| |||||||| ||| ||||  || || ||||||| |||||| || || | |||||    
T  6593266 agataaaataaagttaaattattctgtataggctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaaagagcttgttaacac 6593365  T
Q  443 gtgataagttgttttaataagttctccc 470  Q
     | | ||| |||||| |||| |||||||    
T  6593366 atcaaaagctgttttcataaattctccc 6593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 18857503 - 18857440
Alignment:
Q  344 gataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    ||||||||||||||||||| ||||  ||||  |||||||| ||||||||||||| |||||||||    
T  18857503 gataaaataaagtcaaattgtttttctataatctataagctgttttcataagctgtcttggaga 18857440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 21351930 - 21351895
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtc 66  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21351930 cagtgtaattacaagtgtcggtgtcatgtcggtgtc 21351895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 26005080 - 26005013
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaaca 430  Q
    |||| ||||| ||||||  | |||||||||||||| ||||||||  || |||||||||||||||||||    
T  26005080 ttttcgtataagctatatactgttttcataagctagcttggagagcttatggaaataaggtgaaaaca 26005013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 1773456 - 1773422
Alignment:
Q  176 ctatcttggagaatttatgaaaataagcttatgaa 210  Q
    |||||||||||||||| ||||||||||||||||||    
T  1773456 ctatcttggagaatttctgaaaataagcttatgaa 1773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 12975315 - 12975377
Alignment:
Q  345 ataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggaga 406  Q
    |||||||||| ||||||| ||||  |||| ||||||||| || ||||||||||||||||||||    
T  12975315 ataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggaga 12975377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 35445898 - 35445868
Alignment:
Q  172 taagctatcttggagaatttatgaaaataag 202  Q
    |||||||||||||||||||||||||||||||    
T  35445898 taagctatcttggagaatttatgaaaataag 35445868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 384 - 470
Target Start/End: Original strand, 41052876 - 41052962
Alignment:
Q  384 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctccc 470  Q
    |||||||||| |||| |||||||  || |||||||||| | |||| |||||||||||| || ||| |||||||  ||||| ||||||    
T  41052876 gttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgtttctataagctctccc 41052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 464
Target Start/End: Complemental strand, 3280785 - 3280696
Alignment:
Q  376 tataagcagttttcataagctatcttggagaa-tttttggaaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagt 464  Q
    |||||||||||||||||||||||||| ||||| ||| || ||||||  | |||| || ||||||| | || ||||| |||||| ||||||    
T  3280785 tataagcagttttcataagctatctttgagaactttatgaaaataaactaaaaagagcttatgaagatgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 4014480 - 4014447
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  4014480 ataagctatcttggagaacttatgaaaataagct 4014447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 7319064 - 7319031
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  7319064 ataagctatcttggagaacttatgaaaataagct 7319031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 7674662 - 7674695
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    ||||||||||||||||||||| ||||||||||||    
T  7674662 ataagctatcttggagaatttgtgaaaataagct 7674695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 16937987 - 16937890
Alignment:
Q  343 agataaaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||||| || ||||| |||| ||||||||||||||  ||||| ||| ||||| |||||||| ||  | ||||||| |||||| || |||||||    
T  16937987 agataaaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaa 16937890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 23994799 - 23994726
Alignment:
Q  363 ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 436  Q
    |||| |||||||||||||||  |||||| ||||||||||| |||| || |  ||||||| |||||| |||||||    
T  23994799 tttttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaaaaaagtttat 23994726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 33533611 - 33533546
Alignment:
Q  374 gctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaa 439  Q
    ||||||||  ||||||| |||||||||||||||  || |||||||||| ||||||||  |||||||    
T  33533611 gctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 33533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 35445898 - 35445861
Alignment:
Q  391 taagctatcttggagaatttttggaaataaggtgaaaa 428  Q
    |||||||||||||||||||| || ||||||||||||||    
T  35445898 taagctatcttggagaatttatgaaaataaggtgaaaa 35445861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 36318788 - 36318821
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||||||||| |||||||||    
T  36318788 ataagctatcttggagaatttatgtaaataagct 36318821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 39105478 - 39105511
Alignment:
Q  171 ataagctatcttggagaatttatgaaaataagct 204  Q
    |||||||||||||||||| |||||||||||||||    
T  39105478 ataagctatcttggagaacttatgaaaataagct 39105511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 42569508 - 42569475
Alignment:
Q  170 tataagctatcttggagaatttatgaaaataagc 203  Q
    |||||||||| |||||||||||||||||||||||    
T  42569508 tataagctatattggagaatttatgaaaataagc 42569475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 441
Target Start/End: Original strand, 42582912 - 42582977
Alignment:
Q  376 tataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaaca 441  Q
    ||||||| |||||  |||||||| |||||||| || || ||||||| | |||||||||||||||||    
T  42582912 tataagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaaca 42582977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 3874 - 3780
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||||||||||| ||||||||| |||||||    ||||||||||||||||||| |||| | ||||||| || |||||||  |||||||    
T  3874 cagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcat 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 241629 - 241722
Alignment:
Q  32 agtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    ||||||||||  |||||||||||||||| |||||||    |||||| ||||||||| ||||||| | ||||||| ||||||||||| |||||||    
T  241629 agtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 71759 - 71853
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcat 121  Q
    |||||||||||| |||||| |||||||||||||||||    | |||| ||||||||| ||||||| ||||||||| || |||||| | |||||||    
T  71759 cagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcat 71853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 9772 - 9676
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacatgtccgacatcgggacatgactaatccaagaagtgtccgcgcttcatgt 123  Q
    ||||||||||| | ||||||||||||||| ||||||     |||||| |||| |||||||||||| |  |||||| || |||||||| |||||||||    
T  9772 cagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcatgt 9676  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 468
Target Start/End: Complemental strand, 9668 - 9615
Alignment:
Q  415 aaataaggtgaaaacagtttatgaacacgtgataagttgttttaataagttctc 468  Q
    ||||||| | ||||||| ||||||||| || |||||||||||| ||||||||||    
T  9668 aaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctc 9615  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 20206 - 20239
Alignment:
Q  31 cagtgtaattacaagtgtcggtgtcgtgtcggtg 64  Q
    ||||||||||||||||||| ||||||||||||||    
T  20206 cagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

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