View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2879_low_1 (Length: 594)
Name: NF2879_low_1
Description: NF2879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2879_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 18 - 583
Target Start/End: Complemental strand, 35831005 - 35830440
Alignment:
| Q |
18 |
ctcaagacagtagaaagtctttccatctgaattgaattggctggcttgaagagggtctttggggtcaaaagataatctccaaccattaaggatgccagtt |
117 |
Q |
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| T |
35831005 |
ctcaagacagtagaaagtctttccatctgaattgaattggctggcttgaagagggtctttggggtcaaaagataatctccaaccgttaaggatgccagtt |
35830906 |
T |
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| Q |
118 |
ctatttatgattacaaatccttcaatataatcaattttgtccttaagtgatatcaagtactcttgatcccttgtaaatttagagaaatctgaatagagca |
217 |
Q |
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| T |
35830905 |
ctatttatgattacaaatccttcaatataatcaattttgtccttaagtgatatcaagtactcttgatcccttgtaaatttagagaaatctgaatagagca |
35830806 |
T |
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| Q |
218 |
ccctaatccatttcacctgtaaaatgtcacggattatgtcataannnnnnnnctgttgagaacttttttctgttctgtcatattagagaatgatgtatac |
317 |
Q |
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| T |
35830805 |
ccctaatccatttcacctgtaaaatgtcacagattatgtcttaaattttttactgttgagaacttttttctgttctgtcatattagagaatgatgtatac |
35830706 |
T |
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| Q |
318 |
caacattaagttggtctgagtagagtgaggctcatattttttaagtaagatattaagttcgagccttttgaattgaaaacacatggttgagaggggaggt |
417 |
Q |
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| T |
35830705 |
caacattaagttggtctgagtagagtgaggctcatattttttaagtaaggtattaagttcgagccttttgaattgaaaaaacatggttgagaggggaggt |
35830606 |
T |
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| Q |
418 |
ctcactaaaggtggtcagtgagattcttcgagaaaattagtcttaggcgaagtcgaaagataattcacacatataacctgattttttgaaaaatatatta |
517 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35830605 |
ctcactaaaggtggtcagcgagattcttcgagaaaattagtcttaggcgaagtcgaaagataattcacacatataacctgattttttgaaaaatatatta |
35830506 |
T |
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| Q |
518 |
caaaatgagggaacactcaccatcttcggtgctggttcaagagaaattctagctctggtgatgatg |
583 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
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| T |
35830505 |
caaaatgagggaacactcaccatctttggtgctggttcaagagaaattctagctctagtgatgatg |
35830440 |
T |
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