View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2880-Insertion-2 (Length: 591)
Name: NF2880-Insertion-2
Description: NF2880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2880-Insertion-2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 546; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 546; E-Value: 0
Query Start/End: Original strand, 8 - 591
Target Start/End: Original strand, 41023492 - 41024072
Alignment:
| Q |
8 |
tgagctttattcaatctttttactccattttcttctgctttcacttgagttttctgtatgtcatgaatctgttttaccaacagagagttaggatcctgca |
107 |
Q |
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| T |
41023492 |
tgagctttattcaatcttgttactccattttcttctgctttcacttgagttttctgtatgtcatgaatctgttttaccaacagagagttaggatcttgca |
41023591 |
T |
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| Q |
108 |
gaagtttggtgaaaagttccttgttcgaatataaaacctgtacagcatccaaaaattgattaggctgacaatctgcaccatcttttcctttagagttttt |
207 |
Q |
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| T |
41023592 |
gaagtttggtgaaaagttccttgttcgaatataaaacctgtacagcatccaaaaattgattaggctgacaatctgcaccatcttttcctttagagttttt |
41023691 |
T |
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| Q |
208 |
gttgaaaaatctctgattaacaatcatttttgttacttcattttccaaatctgctacccgatctttctccacacgtacactcttacaactataacctctt |
307 |
Q |
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| T |
41023692 |
gttgaaaaatctctgattaacaatcatttttgttacttcattttccaaatctgctacccgatcattctccacacgtacactcttacaactataacc---t |
41023788 |
T |
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| Q |
308 |
cttcttcttctggaacatgcctgtagttaaaattcttccatcaatgttatgctactaaatcattcatgtaaaggggtgaggggagtggatgcaacaccat |
407 |
Q |
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| T |
41023789 |
cttcttcttctggaacatacctgtagttaaaattcttccatcaatgttatgctactaaatcattcatgtaaaggggtgaggggagtggatgcaacaccat |
41023888 |
T |
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| Q |
408 |
ttttgctgcgtcttgccaactatacatgccaatttaaaaatttccgtcacatacttctagtttatgtgcatgaattatttctcatgaaaatagttgatag |
507 |
Q |
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| T |
41023889 |
ttttgctgcgtcttgccaactatacatgccaatttaaaaatttccgtcacatacttctagtttatgtgcatgaattatttctcatgaaaatagttgatag |
41023988 |
T |
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| Q |
508 |
caaaggtttaaaatatcagtcatagtaactgttgtggtcaaatgtgcctggtgcggcctcaatcgtggtcgcgttgcggttatg |
591 |
Q |
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| T |
41023989 |
caaaggtttaaaatatcagtcatagtaactgttgtggtcaaatgtgcctggtgcggcctcaatcatggtcgcgttgtggttatg |
41024072 |
T |
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