View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2880_high_30 (Length: 294)

Name: NF2880_high_30
Description: NF2880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2880_high_30
NF2880_high_30
[»] chr2 (22 HSPs)
chr2 (134-286)||(34644939-34645094)
chr2 (12-132)||(15239691-15239811)
chr2 (12-132)||(36103392-36103512)
chr2 (12-127)||(40534517-40534632)
chr2 (13-126)||(45076372-45076485)
chr2 (19-103)||(23464524-23464608)
chr2 (12-120)||(28143754-28143864)
chr2 (32-117)||(3365289-3365374)
chr2 (12-132)||(27306740-27306858)
chr2 (13-133)||(27311575-27311695)
chr2 (13-123)||(11687483-11687593)
chr2 (13-133)||(6971600-6971720)
chr2 (13-132)||(25795237-25795356)
chr2 (13-113)||(41464744-41464844)
chr2 (77-133)||(44283627-44283683)
chr2 (68-127)||(10205011-10205070)
chr2 (66-132)||(28143828-28143894)
chr2 (77-121)||(3365369-3365413)
chr2 (84-132)||(15239793-15239841)
chr2 (68-132)||(25795323-25795387)
chr2 (68-132)||(38982998-38983062)
chr2 (84-132)||(45076341-45076389)
[»] chr6 (16 HSPs)
chr6 (12-133)||(30438772-30438893)
chr6 (13-128)||(10145218-10145333)
chr6 (14-132)||(28605569-28605687)
chr6 (13-132)||(12217489-12217609)
chr6 (12-132)||(12605609-12605729)
chr6 (65-132)||(2913415-2913482)
chr6 (29-127)||(8265018-8265116)
chr6 (13-121)||(12240132-12240238)
chr6 (65-134)||(23916209-23916278)
chr6 (13-132)||(9343150-9343269)
chr6 (44-132)||(17599514-17599604)
chr6 (14-59)||(3847480-3847525)
chr6 (13-89)||(359587-359663)
chr6 (68-132)||(3064968-3065032)
chr6 (68-120)||(24986017-24986069)
chr6 (78-114)||(25538043-25538079)
[»] chr4 (51 HSPs)
chr4 (12-129)||(43141768-43141885)
chr4 (12-129)||(54864093-54864210)
chr4 (13-132)||(33622879-33622998)
chr4 (18-133)||(25874735-25874850)
chr4 (12-132)||(35877343-35877463)
chr4 (16-124)||(40592719-40592827)
chr4 (12-132)||(37895254-37895374)
chr4 (12-117)||(50511259-50511364)
chr4 (13-132)||(36196364-36196483)
chr4 (12-117)||(35929039-35929143)
chr4 (12-132)||(19350611-19350729)
chr4 (13-132)||(43556690-43556809)
chr4 (29-132)||(52136698-52136801)
chr4 (12-120)||(8347502-8347611)
chr4 (12-132)||(32193474-32193594)
chr4 (13-132)||(25756711-25756830)
chr4 (29-132)||(4418143-4418246)
chr4 (13-132)||(33615809-33615928)
chr4 (13-100)||(52277996-52278085)
chr4 (32-132)||(1205131-1205231)
chr4 (13-117)||(52966409-52966513)
chr4 (12-87)||(50511471-50511546)
chr4 (66-132)||(24100758-24100824)
chr4 (35-132)||(28460798-28460895)
chr4 (14-131)||(56491072-56491189)
chr4 (29-117)||(31853113-31853201)
chr4 (13-120)||(54673340-54673447)
chr4 (34-132)||(29686399-29686497)
chr4 (18-127)||(27587250-27587359)
chr4 (65-133)||(1100894-1100962)
chr4 (48-132)||(38208314-38208398)
chr4 (49-128)||(50511391-50511470)
chr4 (66-132)||(7086214-7086280)
chr4 (66-132)||(27587329-27587395)
chr4 (66-121)||(24100887-24100942)
chr4 (66-132)||(25756795-25756861)
chr4 (12-132)||(22019933-22020053)
chr4 (68-132)||(29686485-29686549)
chr4 (68-132)||(36132634-36132698)
chr4 (29-133)||(42160019-42160123)
chr4 (13-96)||(9813491-9813574)
chr4 (66-132)||(8347575-8347641)
chr4 (68-118)||(23208647-23208697)
chr4 (66-132)||(33622963-33623029)
chr4 (66-132)||(42159972-42160038)
chr4 (66-132)||(54864063-54864129)
chr4 (92-133)||(17316589-17316630)
chr4 (84-133)||(52966496-52966545)
chr4 (68-132)||(30191981-30192045)
chr4 (68-132)||(48195975-48196039)
chr4 (66-126)||(54673315-54673375)
[»] chr5 (28 HSPs)
chr5 (12-132)||(38978771-38978891)
chr5 (12-129)||(20502116-20502233)
chr5 (12-132)||(29002741-29002861)
chr5 (12-132)||(33247291-33247410)
chr5 (12-132)||(24173419-24173539)
chr5 (12-132)||(29451922-29452041)
chr5 (13-132)||(27600788-27600907)
chr5 (19-132)||(5355587-5355700)
chr5 (13-132)||(7537051-7537170)
chr5 (16-132)||(29874316-29874432)
chr5 (13-120)||(9630246-9630353)
chr5 (18-125)||(35204958-35205065)
chr5 (18-125)||(35212094-35212201)
chr5 (19-132)||(32455140-32455251)
chr5 (13-132)||(73783-73902)
chr5 (13-132)||(13932491-13932610)
chr5 (13-127)||(13278916-13279030)
chr5 (79-132)||(30132884-30132937)
chr5 (69-133)||(8680627-8680691)
chr5 (20-134)||(33970654-33970768)
chr5 (13-118)||(35318527-35318632)
chr5 (92-132)||(30132841-30132881)
chr5 (66-132)||(13932460-13932526)
chr5 (66-135)||(5355547-5355616)
chr5 (16-84)||(13128226-13128294)
chr5 (68-132)||(13789731-13789795)
chr5 (68-132)||(22101993-22102057)
chr5 (77-133)||(38394426-38394482)
[»] chr8 (30 HSPs)
chr8 (14-132)||(35583914-35584032)
chr8 (12-132)||(13831874-13831994)
chr8 (14-132)||(29690467-29690585)
chr8 (12-132)||(34604810-34604930)
chr8 (12-132)||(45372734-45372854)
chr8 (18-132)||(7548496-7548610)
chr8 (12-117)||(44579907-44580012)
chr8 (13-132)||(43932048-43932167)
chr8 (13-120)||(43292598-43292705)
chr8 (14-132)||(43409833-43409951)
chr8 (13-126)||(34745287-34745400)
chr8 (13-118)||(38494269-38494374)
chr8 (13-115)||(38298517-38298619)
chr8 (29-120)||(40645721-40645812)
chr8 (65-132)||(45180121-45180188)
chr8 (66-132)||(34745256-34745322)
chr8 (66-132)||(43292567-43292633)
chr8 (19-132)||(41624737-41624850)
chr8 (13-132)||(9550108-9550227)
chr8 (66-132)||(43932132-43932198)
chr8 (75-118)||(8242151-8242194)
chr8 (18-121)||(27107999-27108102)
chr8 (66-132)||(9420586-9420652)
chr8 (66-132)||(13831958-13832024)
chr8 (66-132)||(34604780-34604846)
chr8 (68-132)||(3236415-3236479)
chr8 (65-117)||(5356875-5356927)
chr8 (68-132)||(8793804-8793868)
chr8 (68-132)||(8803313-8803377)
chr8 (68-132)||(40483282-40483346)
[»] chr3 (34 HSPs)
chr3 (12-134)||(45113731-45113853)
chr3 (12-132)||(27302078-27302198)
chr3 (19-120)||(16123792-16123893)
chr3 (12-132)||(43901610-43901730)
chr3 (12-132)||(53284345-53284465)
chr3 (13-132)||(31376174-31376293)
chr3 (13-133)||(39616909-39617029)
chr3 (13-132)||(53703760-53703880)
chr3 (29-119)||(50100206-50100296)
chr3 (24-132)||(8769175-8769282)
chr3 (13-112)||(21944319-21944418)
chr3 (29-120)||(24489324-24489415)
chr3 (12-132)||(50659948-50660057)
chr3 (24-132)||(8764273-8764380)
chr3 (16-130)||(2544491-2544606)
chr3 (66-132)||(53703729-53703795)
chr3 (13-126)||(48643609-48643722)
chr3 (77-133)||(2544435-2544491)
chr3 (68-132)||(43449043-43449107)
chr3 (66-132)||(31376258-31376324)
chr3 (66-132)||(39616994-39617060)
chr3 (66-132)||(42896141-42896207)
chr3 (84-132)||(19227409-19227457)
chr3 (68-120)||(25313289-25313341)
chr3 (68-132)||(51517042-51517106)
chr3 (84-122)||(36191483-36191521)
chr3 (66-132)||(45113817-45113883)
chr3 (13-113)||(19227326-19227426)
chr3 (68-132)||(21662971-21663035)
chr3 (13-120)||(36191504-36191614)
chr3 (68-120)||(42896227-42896279)
chr3 (13-117)||(44118197-44118301)
chr3 (29-73)||(46220412-46220456)
chr3 (68-132)||(53441906-53441970)
[»] chr7 (43 HSPs)
chr7 (12-132)||(41395661-41395781)
chr7 (12-132)||(41487820-41487940)
chr7 (12-132)||(47280173-47280292)
chr7 (12-117)||(45123274-45123379)
chr7 (12-132)||(27320323-27320443)
chr7 (12-125)||(47484027-47484140)
chr7 (13-129)||(10674153-10674269)
chr7 (13-117)||(37006470-37006574)
chr7 (13-132)||(22618193-22618312)
chr7 (13-132)||(24164546-24164665)
chr7 (14-132)||(47612321-47612439)
chr7 (13-126)||(7456424-7456537)
chr7 (16-132)||(18064755-18064871)
chr7 (68-132)||(24932454-24932518)
chr7 (13-132)||(29559436-29559555)
chr7 (13-119)||(33039572-33039680)
chr7 (35-132)||(40234765-40234862)
chr7 (12-120)||(40198633-40198741)
chr7 (12-79)||(12806937-12807004)
chr7 (13-120)||(39413858-39413965)
chr7 (13-132)||(45025624-45025743)
chr7 (66-120)||(3633274-3633328)
chr7 (13-127)||(41088882-41088996)
chr7 (68-129)||(13860302-13860363)
chr7 (16-117)||(29835099-29835199)
chr7 (68-125)||(40599998-40600055)
chr7 (65-125)||(3633197-3633257)
chr7 (13-129)||(14543298-14543414)
chr7 (68-132)||(31903035-31903099)
chr7 (68-132)||(32811377-32811441)
chr7 (68-131)||(2680858-2680921)
chr7 (66-129)||(24164518-24164581)
chr7 (29-132)||(33901084-33901187)
chr7 (66-126)||(48948947-48949009)
chr7 (13-127)||(13860222-13860335)
chr7 (66-132)||(41487790-41487856)
chr7 (66-132)||(45025593-45025659)
chr7 (13-90)||(7999489-7999566)
chr7 (84-132)||(12806907-12806955)
chr7 (68-132)||(28677316-28677380)
chr7 (68-132)||(36245375-36245439)
chr7 (84-132)||(40198603-40198651)
chr7 (68-132)||(41088851-41088915)
[»] chr1 (28 HSPs)
chr1 (12-127)||(45977098-45977213)
chr1 (16-132)||(27687840-27687956)
chr1 (13-132)||(44224299-44224418)
chr1 (13-132)||(29438168-29438287)
chr1 (12-132)||(13320302-13320422)
chr1 (12-132)||(52279233-52279353)
chr1 (13-132)||(51590460-51590579)
chr1 (15-132)||(13770741-13770858)
chr1 (35-132)||(34174885-34174982)
chr1 (13-125)||(19998441-19998553)
chr1 (13-132)||(48565557-48565676)
chr1 (16-132)||(13321747-13321863)
chr1 (13-129)||(15699494-15699610)
chr1 (36-127)||(52030872-52030963)
chr1 (13-120)||(31050280-31050387)
chr1 (65-132)||(18038770-18038837)
chr1 (65-132)||(22182764-22182831)
chr1 (26-113)||(29064168-29064254)
chr1 (87-129)||(13321716-13321758)
chr1 (66-120)||(18038699-18038753)
chr1 (66-132)||(51590429-51590495)
chr1 (77-132)||(2351132-2351187)
chr1 (93-132)||(9552689-9552728)
chr1 (12-59)||(32837665-32837712)
chr1 (33-132)||(43850948-43851047)
chr1 (13-55)||(25238649-25238691)
chr1 (68-132)||(26924298-26924362)
chr1 (92-132)||(52279343-52279383)
[»] scaffold0200 (1 HSPs)
scaffold0200 (18-127)||(25618-25727)
[»] scaffold0023 (1 HSPs)
scaffold0023 (13-132)||(112822-112941)
[»] scaffold0059 (1 HSPs)
scaffold0059 (13-132)||(26585-26704)
[»] scaffold0110 (1 HSPs)
scaffold0110 (13-133)||(40188-40309)
[»] scaffold0460 (1 HSPs)
scaffold0460 (18-120)||(12248-12350)
[»] scaffold0287 (2 HSPs)
scaffold0287 (66-120)||(12757-12811)
scaffold0287 (65-125)||(12828-12888)
[»] scaffold0767 (2 HSPs)
scaffold0767 (65-118)||(3891-3944)
scaffold0767 (82-132)||(3808-3858)
[»] scaffold0533 (1 HSPs)
scaffold0533 (65-122)||(3249-3306)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 8e-67; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 134 - 286
Target Start/End: Original strand, 34644939 - 34645094
Alignment:
Q  134 aattgaaattaacatatctatagttgaatgacctccaataata-tgtag--gtatgtcacttgccaattagcaaagactaattaaatggtgtatgattgg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34644939 aattgaaattaacatatctatagttgaatgacctccaataatactacagtagtatgtcacttgccaattagcaaagactaattaaatggtgtatgattgg 34645038  T
Q  231 tgttagtgccttggaacttttgccgacagtccattggtgcttaagggcaagatccg 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34645039 tgttagtgccttggaacttttgccgacagtccattggtgcttaagggcaagatccg 34645094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 15239811 - 15239691
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||| ||| | |||| |||||||    
T  15239811 gttgactttttaggttcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaaccaacaaaatcaattgtttctta 15239712  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||||| |||| ||||    
T  15239711 taataaggatcagaggaagta 15239691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 36103512 - 36103392
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||||| |   ||||||||||||||| ||||||||| ||||| ||||||| ||| |||    
T  36103512 gttgattttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttacacaatgaactaaaaatgttaattgtttatta 36103413  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  36103412 taataaggaccggagggagta 36103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 40534632 - 40534517
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||| | | ||||||||||| ||||||||||||| |||||| | |||| |||||||    
T  40534632 gttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttatacaatgaactaaaaaaatcaattgtttctta 40534533  T
Q  112 taataaggatcggagg 127  Q
    ||||||||| ||||||    
T  40534532 taataaggaccggagg 40534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 45076372 - 45076485
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||||||| |||||||||||||| ||| |||||||| ||| | | ||||||||||||||| |||||||||||||||||| |||| ||| ||||    
T  45076372 ttgattttttaggttcatagaataattaatgtattttattgtacatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttat 45076471  T
Q  113 aataaggatcggag 126  Q
    |||||||| |||||    
T  45076472 aataaggaccggag 45076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 23464608 - 23464524
Alignment:
Q  19 ttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaatt 103  Q
    ||||||||| |||||||||||||| |||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||    
T  23464608 ttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatctcttatacaatgaaccaaaaaagttaatt 23464524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 28143864 - 28143754
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttct-- 109  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||| | | ||||||||||||||| |||||||||||||||| | |||| |||||      
T  28143864 gttgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttctaa 28143765  T
Q  110 tataataagga 120  Q
    |||||||||||    
T  28143764 tataataagga 28143754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 3365374 - 3365289
Alignment:
Q  32 gaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||||||||||| || |||||| | | |||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  3365374 gaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaacctaaaaagttaaatttttcttataataa 3365289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 27306740 - 27306858
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||| | | |||||||   ||||| ||||| |||||||||| | |||| |||||||    
T  27306740 gttgactttttaggttcattgaataattaatgtatcttattgtaaatatagactagatac--gacttacacaataaaccaaaaaaatcaattgtttctta 27306837  T
Q  112 taataaggatcggagggagta 132  Q
    |||||| ||||||| ||||||    
T  27306838 taataatgatcggatggagta 27306858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 27311695 - 27311575
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| ||||| ||||||||||  |||||| || |||||| | | |||||| |||| || ||||||||||| ||||||| |||| ||||||||    
T  27311695 ttgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgtacaatgaacctaaaaagtcaattgtttcttat 27311596  T
Q  113 aataaggatcggagggagtag 133  Q
    |||||| ||| ||||||||||    
T  27311595 aataagaatccgagggagtag 27311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 11687593 - 11687483
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| ||||| |||||||||||||| ||  || |||||| | | ||||||||||||||| ||||| ||   | ||||| |||| ||||||||    
T  11687593 ttgactttttagatttattgaataattaatataactcgttataaatatagactagatacatcacttacacaataaatttataaagtcaattgtttcttat 11687494  T
Q  113 aataaggatcg 123  Q
    |||||||||||    
T  11687493 aataaggatcg 11687483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 6971600 - 6971720
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||  ||||| | ||||||||| ||| || || |||||| | | ||||||||||| ||| |||||||||| ||||||| || | ||||||||    
T  6971600 ttgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttat 6971699  T
Q  113 aataaggatcggagggagtag 133  Q
    ||||||||  ||||| |||||    
T  6971700 aataaggacaggaggaagtag 6971720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 25795356 - 25795237
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || ||||||||||| ||| |  || |||||| | | ||||||||| ||||| || || |||| ||||||| |||| ||||||||    
T  25795356 ttgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttat 25795257  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||| ||||    
T  25795256 aataaggaccggaggtagta 25795237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 41464744 - 41464844
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||| ||| || ||||||||||| |||||  || |||||| | | ||||||||||||||| |||||||||| ||||| | |||||||| ||||    
T  41464744 ttgattttttaagttcattgaataattaatgtatctcgttataaatatagactagatacatcacttacacaatgaacctaaaaaatcaattattttttat 41464843  T
Q  113 a 113  Q
    |    
T  41464844 a 41464844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 44283627 - 44283683
Alignment:
Q  77 ttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    |||| ||||||| | ||||||| ||||||||||||||||||||||| || |||||||    
T  44283627 ttattcaatgaatctaaaaagtcaattatttcttataataaggatccgatggagtag 44283683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 10205011 - 10205070
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagg 127  Q
    |||||||| |||||||||||| ||||| ||| || ||||||||||||  |||||||||||    
T  10205011 atacatcatttatacaatgaatcaaaagagtcaaatatttcttataaataggatcggagg 10205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 28143828 - 28143894
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  28143828 agatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 28143894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 3365369 - 3365413
Alignment:
Q  77 ttatacaatgaaccaaaaaagttaattatttcttataataaggat 121  Q
    |||| ||||||| ||||||| | ||||||||||||||||||||||    
T  3365369 ttattcaatgaatcaaaaaaatcaattatttcttataataaggat 3365413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 15239793 - 15239841
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  15239793 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 15239841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 25795323 - 25795387
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| | |||| ||||||| | ||||||| |||| |||||| ||||||||| |||||||||||    
T  25795323 atacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 25795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 38983062 - 38982998
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || ||||| ||||||  |||| |||||||||||    
T  38983062 atacatcatttatgcaatgaatcaaaaaagtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 45076389 - 45076341
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| ||||| | |||| |||||||||||||||| |||||||||||    
T  45076389 atgaacctaaaaaatcaattttttcttataataaggaccggagggagta 45076341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 30438772 - 30438893
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || |||||||||||||| ||| |||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  30438772 gttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaataaaccaaaaaagttaattatttctta 30438871  T
Q  112 taataaggatcggagggagtag 133  Q
    ||||||||||||||||||||||    
T  30438872 taataaggatcggagggagtag 30438893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 10145333 - 10145218
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||| | | |||||||||||||||||  ||||| ||||||| | |||||||||||||    
T  10145333 ttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactagatacatcacttatatgatgaatcaaaaaaatcaattatttcttat 10145234  T
Q  113 aataaggatcggaggg 128  Q
    ||||||||||||||||    
T  10145233 aataaggatcggaggg 10145218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 28605687 - 28605569
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||| |||||| || |||||||||||||| |||||||||||||||| |   || |||||||||||| ||||||||||||||||||||||| |||||||||    
T  28605687 tgaccttttagattcatagaataattaatgtatcttattgtaaatatagtttaaatacatcacttacacaatgaaccaaaaaagttaattgtttcttata 28605588  T
Q  114 ataaggatcggagggagta 132  Q
    ||||||| | |||||||||    
T  28605587 ataaggaccagagggagta 28605569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 12217609 - 12217489
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaacc-aaaaaagttaattatttctta 111  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| | | ||||||||||||||||||||| |||| |||||| | |||| ||| |||    
T  12217609 ttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaataaaccaaaaaaaatcaattgtttttta 12217510  T
Q  112 taataaggatcggagggagta 132  Q
    |||||||||||||||| ||||    
T  12217509 taataaggatcggaggaagta 12217489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 12605729 - 12605609
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||| ||||||||| || ||||||||||| |||||||||||||||| | | || ||||||||||||   ||||||  |||||| | |||| |||||||    
T  12605729 gttgacattttaggttcatggaataattaatgtatcttattgtaaatatagactaaatacatcacttacgtaatgaataaaaaaaatcaattgtttctta 12605630  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  12605629 taataaggaacggagggagta 12605609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 2913415 - 2913482
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||| |||||||||||||||| ||||||| |||| || ||||||||||||| |||||||||||    
T  2913415 tagatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccggagggagta 2913482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 8265018 - 8265116
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagg 127  Q
    |||||||||||||| |||||| || |||||| | | ||||||||||||||| |||||||||  ||||| | || | |||||||||||||||| ||||||    
T  8265018 atagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacttaaaaaatcaactttttcttataataaggaacggagg 8265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 12240132 - 12240238
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||||||| || |||||||||| || ||  ||| |||||| ||| ||||||||||| ||| |||||||||| ||||| | ||||||||||| |    
T  12240132 ttgattttttaggttaattgaataattaacatctc--attataaatataaattagatacatcatttacacaatgaacctaaaaaatcaattatttcttgt 12240229  T
Q  113 aataaggat 121  Q
    |||||||||    
T  12240230 aataaggat 12240238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 23916209 - 23916278
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtaga 134  Q
    |||||| ||||| || |||||||| | ||||||| |||| |||||||||||||||| |||||||||||||    
T  23916209 tagatatatcacatacacaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagtaga 23916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 9343150 - 9343269
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || |||||||||||||| |||||| || |||||| | | ||||||||| | ||| ||||| ||    |||||| |||| |||| |||    
T  9343150 ttgactttttagattcatagaataattaatgtatcttgttataaatatagactagatacattatttacacaataaatttgaaaagtcaattgtttcctat 9343249  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||| ||||||    
T  9343250 aataaggaccggaaggagta 9343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 17599514 - 17599604
Alignment:
Q  44 tatcttattgtaaatacaaagtagatacatcacttata--caatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||||||||| | | ||||||||  |||||||  ||||||| ||||||||| |||||||| || ||||||||| || ||||||||    
T  17599514 tatcttattgtaaatatagactagatacacaacttatatacaatgaatcaaaaaagtcaattatttattgtaataaggaccgaagggagta 17599604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 3847525 - 3847480
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaata 59  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  3847525 tgactttttaggttcatataataattaatatattttattataaata 3847480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 359663 - 359587
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaac 89  Q
    ||||||||||||||| |  |||||| |||| |||||  || |||||| | | ||||||||||||||| |||||||||    
T  359663 ttgactttttaggttcaatgaataactaatgtatctcgttataaatatagattagatacatcacttacacaatgaac 359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3064968 - 3065032
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||| || |||| ||||||| ||||||||| || ||||||||||||  |||| |||||||||||    
T  3064968 atacaccatttatgcaatgaatcaaaaaagtaaaatatttcttataaataggaccggagggagta 3065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24986017 - 24986069
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||| |||| ||||||||| ||||||| |||| | ||||||||||||||    
T  24986017 atacatcaattatccaatgaacctaaaaagtgaattgtctcttataataagga 24986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 25538043 - 25538079
Alignment:
Q  78 tatacaatgaaccaaaaaagttaattatttcttataa 114  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  25538043 tatacaatgaatcaaaaaagttaaatatttcttataa 25538079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 43141885 - 43141768
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  43141885 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttctta 43141786  T
Q  112 taataaggatcggaggga 129  Q
    ||||||||| ||||||||    
T  43141785 taataaggaccggaggga 43141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 54864093 - 54864210
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  54864093 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttctta 54864192  T
Q  112 taataaggatcggaggga 129  Q
    ||||||||| ||||||||    
T  54864193 taataaggaccggaggga 54864210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 33622998 - 33622879
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  33622998 ttgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcacctatacaatgaaccaaaaaagttaattgtttcttat 33622899  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  33622898 aataaggaccggagggagta 33622879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 25874735 - 25874850
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    ||||||| || |||||||||||||| ||| |||||||||||| | | |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  25874735 tttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaaattaattctttcttataataa 25874834  T
Q  118 ggatcggagggagtag 133  Q
    ||| ||||||||||||    
T  25874835 ggaccggagggagtag 25874850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 35877343 - 35877463
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||| |   || |||||||||||| |||||||||||||||| |||||| |||||||    
T  35877343 gttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttctta 35877442  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||||||| |||||||    
T  35877443 taataaggatcggtgggagta 35877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 40592827 - 40592719
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    ||||||||||||||||||||||||||| |||||| || |||||| ||| |||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  40592827 actttttaggtttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaatccaaaaagttaattgtttcttataat 40592728  T
Q  116 aaggatcgg 124  Q
    || ||||||    
T  40592727 aaagatcgg 40592719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 37895374 - 37895254
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || |||||||||||||| ||| |||||||||||  | | |||||||||||||||||||||||||||||||| | || | |||||||    
T  37895374 gttgactttttagattcatagaataattaatgtattttattgtaaatgtagactagatacatcacttatacaatgaaccaaaaaaatcaactgtttctta 37895275  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  37895274 taataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 50511364 - 50511259
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||||| |   || |||||||||||| ||||||||||||||||||||||| |||||||    
T  50511364 gttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaagttaattgtttctta 50511265  T
Q  112 taataa 117  Q
    ||||||    
T  50511264 taataa 50511259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 36196483 - 36196364
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || |||||||||||||| |||||||||||||||  | | || |||||||||||||| |||||||||||||| | |||| ||||||||    
T  36196483 ttgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcacttataaaatgaaccaaaaaaatcaattgtttcttat 36196384  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  36196383 aataaggaccggagggagta 36196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 35929039 - 35929143
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||| | | ||||||||||||||| |||||||||||||||| | |||| |||||||    
T  35929039 gttgattttttaggtttatagaataattaatgtatcttattataaatatagattagatacatcacttacacaatgaaccaaaaaa-tcaattgtttctta 35929137  T
Q  112 taataa 117  Q
    ||||||    
T  35929138 taataa 35929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 19350729 - 19350611
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||||||||||||||| ||||| | ||||||| |||||| | | ||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  19350729 gttgactttttaggtttatagaatacttaatgt-tcttattataaataaagactagatac-tcacttacacaatgaaccaaaaaaattaattgtttctta 19350632  T
Q  112 taataaggatcggagggagta 132  Q
    |||||| ||||||||| ||||    
T  19350631 taataaagatcggaggaagta 19350611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 43556809 - 43556690
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||  | | ||||||| ||||||| |||| |||| |||||| | |||| ||||||||    
T  43556809 ttgattttttaggttcatagaataattaatgtatcttattgtaaatgtagactagatacgtcacttacacaacgaactaaaaaaatcaattgtttcttat 43556710  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  43556709 aataaggaccggagggagta 43556690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 52136801 - 52136698
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggg 128  Q
    |||||||||||||| |||||| || |||||| | | || |||||||||||| |||||||||| |||||||||||| |||||||||||||||| |||||||    
T  52136801 atagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaacctaaaaagttaattttttcttataataaggaccggaggg 52136702  T
Q  129 agta 132  Q
    ||||    
T  52136701 agta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 8347611 - 8347502
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaa-aaaagttaattatttctt 110  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||| | | ||||||||||| |||||||||||||||| |||| | || | ||||||    
T  8347611 gttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttatacaatgaaccaaaaaaaatcaaatgtttctt 8347512  T
Q  111 ataataagga 120  Q
    ||||||||||    
T  8347511 ataataagga 8347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 32193594 - 32193474
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| |||||| ||| |||||||||||||| || ||||||  ||||| | | ||||||||| ||||| | |||||||||||||||| |||| |||||||    
T  32193594 gttgattttttaagttcatagaataattaatgtaccttattagaaatatagactagatacattacttacataatgaaccaaaaaagtcaattgtttctta 32193495  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  32193494 taataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 25756830 - 25756711
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||| ||| || | ||||||||| |||||  || |||||| | | ||||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  25756830 ttgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttat 25756731  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  25756730 aataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 4418143 - 4418246
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggg 128  Q
    |||||||||||||| ||| || || |||||| ||| || |||||||||||| |||||||||| ||||| | |||| |||||||||||||||| |||||||    
T  4418143 atagaataattaatgtattttgttataaatataaactaaatacatcacttacacaatgaacctaaaaaatcaattttttcttataataaggaccggaggg 4418242  T
Q  129 agta 132  Q
    ||||    
T  4418243 agta 4418246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 33615809 - 33615928
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || || || |||||||| |||||||||||||||| | | ||||||||||||||| |||||||| | ||||| | |||| ||| ||||    
T  33615809 ttgattttttagattcattgagtaattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgttttttat 33615908  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  33615909 aataaggaccggagggagta 33615928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 52278085 - 52277996
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatac--atcacttatacaatgaaccaaaaaagtta 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| | | || ||||  |||||||||| |||||| |||||||||||    
T  52278085 ttgactttttagatttatagaataattaatatatcttattgtaaatatagactaaatacatatcacttatataatgaatcaaaaaagtta 52277996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 1205131 - 1205231
Alignment:
Q  32 gaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagt 131  Q
    ||||||||||| ||||||||| |||||| | | ||||||||||||||| ||||||||   ||||| | |||| ||||||||||||| |||||||||||||    
T  1205131 gaataattaatgtatcttattataaatatagactagatacatcacttagacaatgaatataaaaaatcaattttttcttataataaagatcggagggagt 1205230  T
Q  132 a 132  Q
    |    
T  1205231 a 1205231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 52966513 - 52966409
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| ||||||||||||||  ||||| || |||||| | | |||||||||||||||||||||||||  ||||||| || | ||||||||    
T  52966513 ttgacttttttggttcatagaataattaatgcatcttgttataaatatagactagatacatcacttatacaatgaacttaaaaagtcaaatttttcttat 52966414  T
Q  113 aataa 117  Q
    |||||    
T  52966413 aataa 52966409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 50511546 - 50511471
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatga 87  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||| ||| |||||||||| |||| |||||||    
T  50511546 gttgactctttaggttcatagaataattaatgtatcttattgtaaatataaactagatacatcccttacacaatga 50511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 24100824 - 24100758
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  24100824 agatacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagggagta 24100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 28460798 - 28460895
Alignment:
Q  35 taattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||||| ||||||||| | | || |||||||||||||| |||||| | ||||||  |||| |||||||||||||| |||||||||||||    
T  28460798 taattaatttatcttgttgtaaatatagactaaatacatcacttatataatgaatctaaaaagccaattgtttcttataataagaatcggagggagta 28460895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 56491189 - 56491072
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||||||||| ||| || ||||||||||| || ||  || |||||| | | ||||||||| |||||||||||||||| ||||||| ||||  | ||||||    
T  56491189 tgactttttaagttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttata 56491090  T
Q  114 ataaggatcggagggagt 131  Q
    ||||||| ||||||||||    
T  56491089 ataaggaccggagggagt 56491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 31853113 - 31853201
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||||||| |||||| || |||||| | | ||||||||||||||| |||||||||| ||||||| || | |||||||||||||    
T  31853113 atagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacctaaaaagtcaaatttttcttataataa 31853201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 54673340 - 54673447
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||||||| || |||||| ||||  ||||  || |||||| | | ||||||||||||||| | |||||||| ||||||| |||| ||||||||    
T  54673340 ttgactttttaggttcattgaataagtaatgcatctcgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaattgtttcttat 54673439  T
Q  113 aataagga 120  Q
    ||||||||    
T  54673440 aataagga 54673447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 29686497 - 29686399
Alignment:
Q  34 ataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||| ||| || || |||||| | | ||||||||||| ||| |||||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  29686497 ataattaatgtatattgttataaatatagactagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 29686399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 27587359 - 27587250
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||| || ||||||||||| |||||  || |||||| | | ||||||||||| ||||| ||| || | ||||||| |||| |||||||||||||    
T  27587359 tttttaggttcattgaataattaatgtatctcgttataaatatacactagatacatcatttatataataaatctaaaaagtcaattgtttcttataataa 27587260  T
Q  118 ggatcggagg 127  Q
    ||| ||||||    
T  27587259 ggaccggagg 27587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 1100962 - 1100894
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    ||||||||||||||| |||||||||| ||||||| || | |||||||||||||||| ||||||| ||||    
T  1100962 tagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggtgtag 1100894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 38208314 - 38208398
Alignment:
Q  48 ttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| ||||| | | ||||||||||||||| ||||||||| ||||| || |||| ||||||||| |||||| |||||||||||    
T  38208314 ttattgaaaatatagactagatacatcacttaaacaatgaactaaaaatgtcaattgtttcttatattaaggaccggagggagta 38208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 50511470 - 50511391
Alignment:
Q  49 tattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggg 128  Q
    ||||||||||| ||| |||| ||||| |||| ||||||||| |||||||| || | |||||||||||||||| |||||||    
T  50511470 tattgtaaatataaactagacacatcccttacacaatgaactaaaaaagtcaagtgtttcttataataaggaccggaggg 50511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 7086214 - 7086280
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||||||| |||||||||| ||||||| || | |||||||||||||||| |||| ||||||    
T  7086214 agatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggaaggagta 7086280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 27587329 - 27587395
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| ||||||||| ||||| | |||||||||||||||||||||||||||| ||||    
T  27587329 agatacattaattattcaatgaacctaaaaaataaattatttcttataataaggatcggaggtagta 27587395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 24100887 - 24100942
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggat 121  Q
    |||||||| | |||| ||||||| | ||||||||||||||||||||||||||||||    
T  24100887 agatacattaattattcaatgaatctaaaaagttaattatttcttataataaggat 24100942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 25756795 - 25756861
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| ||||||||  ||||||| |||| |||||||||||||||| |||||||||||    
T  25756795 agatacattaattatccaatgaacataaaaagtcaattgtttcttataataaggaccggagggagta 25756861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 22020053 - 22019933
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || ||   |||||||||  ||||  || |||||| | | |||| |||||||||| | |||||| | |||||||||||| || ||||    
T  22020053 gttgactttttagattaattagataattaatgcatctcgttataaatatagattagacacatcacttacagaatgaatctaaaaagttaattgttactta 22019954  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||| ||||||    
T  22019953 taataaggaccggatggagta 22019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 29686485 - 29686549
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| | ||||||||||||   ||||| |||||| |||||||||||||||| |||||||||||    
T  29686485 atacattaattatacaatgaatttaaaaaattaattgtttcttataataaggaccggagggagta 29686549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 36132698 - 36132634
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||  ||||  ||||||||||    
T  36132698 atacatcatttatacaatgaatcaaaaaagtcaaatatttcttataaataggactggagggagta 36132634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 42160019 - 42160123
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggg 128  Q
    |||||||||||||| |||||| || |||||| | | || |||||||||||| | |||||  | ||||||| || | ||||||||||||| || ||||||     
T  42160019 atagaataattaatgtatcttgttataaatatagactaaatacatcacttacataatgattctaaaaagtcaaatgtttcttataataaagaccggagga 42160118  T
Q  129 agtag 133  Q
    |||||    
T  42160119 agtag 42160123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 9813574 - 9813491
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaa 96  Q
    |||||||||||||||||| | || ||||||  ||||  || |||||| | | ||||||||||||||| |||||||||| |||||    
T  9813574 ttgactttttaggtttattgcatgattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacctaaaaa 9813491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 8347575 - 8347641
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  8347575 agatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 8347641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 23208697 - 23208647
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    |||||||| |||||||||||||| |||||||||||| ||| | ||||||||    
T  23208697 atacatcaattatacaatgaacctaaaaagttaattgtttttcataataag 23208647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 33622963 - 33623029
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||  ||||||| |||| |||||||||||| |||||||||||||||    
T  33622963 agatacattaattattctatgaacgtaaaaagtcaattttttcttataatagggatcggagggagta 33623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 42160038 - 42159972
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | |||||| |||||| | ||||||||||||||||||||| ||||| |||||    
T  42160038 agatacattaattattctatgaacaaaaaaaatcaattatttcttataataaggaccggagtgagta 42159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 54864129 - 54864063
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  54864129 agatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 54864063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 17316589 - 17316630
Alignment:
Q  92 aaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    |||||||||| | |||||||||||||||| ||||||||||||    
T  17316589 aaaaagttaactttttcttataataaggaccggagggagtag 17316630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 52966496 - 52966545
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    ||||||||||||||| |||| |||||||||||||||| |||  |||||||    
T  52966496 atgaaccaaaaaagtcaattgtttcttataataaggaccggcaggagtag 52966545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 30191981 - 30192045
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| |||||||||||| | ||||||||||  | || |||||||||||    
T  30191981 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaatacgaccggagggagta 30192045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 48195975 - 48196039
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||||||||||||| || | ||||||||||  |||| |||||| ||||    
T  48195975 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggaggaagta 48196039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 54673375 - 54673315
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggag 126  Q
    |||| ||| |||||| ||||||||| ||||||| || | |||||||||||||||| |||||    
T  54673375 agatgcattacttattcaatgaacctaaaaagtcaaatgtttcttataataaggaccggag 54673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 38978771 - 38978891
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||||| |||||| |||||||    
T  38978771 gttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttctta 38978870  T
Q  112 taataaggatcggagggagta 132  Q
    |||||||||||||||||||||    
T  38978871 taataaggatcggagggagta 38978891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 20502116 - 20502233
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||| | | ||||||||||||||| |||||||||||||||| |||||| |||||||    
T  20502116 gttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttctta 20502215  T
Q  112 taataaggatcggaggga 129  Q
    ||||||||| ||||||||    
T  20502216 taataaggaccggaggga 20502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 29002861 - 29002741
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| ||||||||||||| |||||||||||||||||||| | ||||| | | ||||||||||||||| |||||||||||||||||| |||| |||||||    
T  29002861 gttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgtttctta 29002762  T
Q  112 taataaggatcggagggagta 132  Q
    ||| |||||||||||||||||    
T  29002761 taacaaggatcggagggagta 29002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 33247410 - 33247291
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| | | |||||| |||||||||| ||||||||||||||||||||| | |||||    
T  33247410 gttgactttttaggttcata-aataattaatatatcttattgtaaatatagactagatatatcacttatagaatgaaccaaaaaagttaattgtctctta 33247312  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  33247311 taataaggaccggagggagta 33247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 24173539 - 24173419
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||| |||||||||||||||||| |||||||||| ||||| | | ||||||||||||||| ||||||||| |||||| | ||||||||||||    
T  24173539 gttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaactaaaaaaatcaattatttctta 24173440  T
Q  112 taataaggatcggagggagta 132  Q
    |||||||||  ||||||||||    
T  24173439 taataaggactggagggagta 24173419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29451922 - 29452041
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||| | | ||||||||||||||| |||||||||||||||| | |||| |||||||    
T  29451922 gttgattttttagattcatagaataattaatgtatcttattgtaaatatatactagatacatcacttacacaatgaaccaaaaaa-tcaattgtttctta 29452020  T
Q  112 taataaggatcggagggagta 132  Q
    |||||||||||||||||||||    
T  29452021 taataaggatcggagggagta 29452041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 27600788 - 27600907
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||| | | |||||| |||||||| |||||||| ||||||| | |||||||||||||    
T  27600788 ttgactttttaagttcatagaataattaatgtatcttattgtaaatatagattagataaatcacttacacaatgaatcaaaaaaatcaattatttcttat 27600887  T
Q  113 aataaggatcggagggagta 132  Q
    ||||||||||||| ||||||    
T  27600888 aataaggatcggatggagta 27600907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 5355587 - 5355700
Alignment:
Q  19 ttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||| || |||||||||||| ||||||||| |||||||| || | ||||||||||||||    
T  5355587 ttttaggttcatagaataattaatgtatcttattgtaaatataaactaaatacatcacttacacaatgaactaaaaaagtcaactgtttcttataataag 5355686  T
Q  119 gatcggagggagta 132  Q
    || |||||||||||    
T  5355687 gaccggagggagta 5355700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 7537051 - 7537170
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||| ||||||| |||||||||||||| |||||||| ||||||| | | ||||||||||||||| |||||||||||||||| | |||| ||| ||||    
T  7537051 ttgacttcttaggttaatagaataattaatgtatcttatcgtaaatatatactagatacatcacttacacaatgaaccaaaaaaatcaattgttttttat 7537150  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  7537151 aataaggaccggagggagta 7537170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 29874432 - 29874316
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    |||||||||||| |||||||||||||| ||| |||||  ||||| | | ||||||||||||||| |||||||||||||||||| |||| ||||||||| |    
T  29874432 actttttaggttcatagaataattaatgtattttattaaaaatatagactagatacatcacttaaacaatgaaccaaaaaagtcaattgtttcttatatt 29874333  T
Q  116 aaggatcggagggagta 132  Q
    ||| | |||||||||||    
T  29874332 aagaaccggagggagta 29874316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 9630353 - 9630246
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || |||||||||||||| |||||||||||||||| ||  || ||| |||||||| |||||||||||||||| |||||| ||||||||    
T  9630353 ttgattttttagattcatagaataattaatgtatcttattgtaaatataatctaaatatatcacttacacaatgaaccaaaaaaattaattgtttcttat 9630254  T
Q  113 aataagga 120  Q
    ||||||||    
T  9630253 aataagga 9630246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 35204958 - 35205065
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||| |||||||||||||| |||||||||||||||| |   |||||||||| |||| ||||||||| |||||||| |||| |||||||||||||    
T  35204958 tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataa 35205057  T
Q  118 ggatcgga 125  Q
     |||||||    
T  35205058 agatcgga 35205065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 35212201 - 35212094
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||| |||||||||||||| |||||||||||||||| |   |||||||||| |||| ||||||||| |||||||| |||| |||||||||||||    
T  35212201 tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataa 35212102  T
Q  118 ggatcgga 125  Q
     |||||||    
T  35212101 agatcgga 35212094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 32455251 - 32455140
Alignment:
Q  19 ttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    ||||| ||| |||||||||||||| |||||||||||||||| | | ||||||||||||||  |||||||| ||||||||| |||  |||||||||| |||    
T  32455251 ttttaagttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttccacaatgaatcaaaaaagtcaat--tttcttataacaag 32455154  T
Q  119 gatcggagggagta 132  Q
    || |||||||||||    
T  32455153 gaccggagggagta 32455140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 73902 - 73783
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||| ||||| || |||||||||||||||||  || |||| | | ||||||||||||| ||| |||||||| | ||||||| |||| ||| ||||    
T  73902 ttgacttttcaggttcattgaataattaatatatctcgttataaacaaagagtagatacatcatttacacaatgaatctaaaaagtcaattgttttttat 73803  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  73802 aataaggaccggagggagta 73783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 13932491 - 13932610
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||| ||| || | ||||||||| |||||  || |||||| | | ||||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  13932491 ttgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttat 13932590  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| | |||||||||    
T  13932591 aataaggaccagagggagta 13932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 13278916 - 13279030
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||||||||| ||||| |||||  ||||  || |||||| ||| ||||||||||||||| ||||| || | ||||||| || | ||||||||    
T  13278916 ttgattttttaggtttattgaatagttaatgcatctcgttataaatataaattagatacatcacttacacaataaatctaaaaagtcaactgtttcttat 13279015  T
Q  113 aataaggatcggagg 127  Q
    |||||||| ||||||    
T  13279016 aataaggaccggagg 13279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 30132884 - 30132937
Alignment:
Q  79 atacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  30132884 atacaatgaatcaaaaaagttaattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 8680627 - 8680691
Alignment:
Q  69 tacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    ||||||||||| |||||||||| ||||||| || | |||||||||||||||| ||||||||||||    
T  8680627 tacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtag 8680691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 33970768 - 33970654
Alignment:
Q  20 tttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagg 119  Q
    ||||| || |||||||||||||| ||| |||||  ||||| | | || |||||||| ||||||||| ||  ||||||||||||| ||||||||||||| |    
T  33970768 tttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaataaaataaaaaagttaattgtttcttataataaag 33970669  T
Q  120 atcggagggagtaga 134  Q
    |  ||| ||||||||    
T  33970668 actggatggagtaga 33970654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 35318632 - 35318527
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||| |||||| ||||||||||| |||||  || ||||||   | ||||||||| | ||||||||  |||  ||| |||||||||||||||||    
T  35318632 ttgattttttaagtttattgaataattaatgtatctcgttataaatatggactagatacattatttatacaacaaacttaaatagttaattatttcttat 35318533  T
Q  113 aataag 118  Q
    ||||||    
T  35318532 aataag 35318527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 30132881 - 30132841
Alignment:
Q  92 aaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  30132881 aaaaagttaattttttcttataataaggaccggagggagta 30132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 13932526 - 13932460
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| ||||||||  ||||||| |||| |||||||||| ||||| |||||||||||    
T  13932526 agatacattaattatccaatgaacataaaaagtcaattgtttcttataacaaggaccggagggagta 13932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 5355616 - 5355547
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtagaa 135  Q
    |||||||| | |||| | ||||||| |||| ||||| | ||||||| ||||| |||||||||||||||||    
T  5355616 agatacattaattattctatgaacctaaaatgttaactttttcttagaataaagatcggagggagtagaa 5355547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 13128226 - 13128294
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaa 84  Q
    |||||||| |||||| |||||||||||||||||  || |||||| | | ||||| ||||||||| ||||    
T  13128226 actttttatgtttattgaataattaatatatctcgttataaatatagactagatgcatcacttacacaa 13128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 13789795 - 13789731
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || | ||||||||||  |||| |||||||||||    
T  13789795 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagta 13789731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 22101993 - 22102057
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| | ||||||||| || ||||||||| || ||||||||||||  | ||||||||||||||    
T  22101993 atacattatttatacaataaatcaaaaaagtcaaatatttcttataaatatgatcggagggagta 22102057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 38394482 - 38394426
Alignment:
Q  77 ttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    |||| ||||||| | ||||||| |||| ||||||||||  |||||||||||||||||    
T  38394482 ttattcaatgaatctaaaaagtcaattttttcttataaataggatcggagggagtag 38394426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 35583914 - 35584032
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35583914 tgaccttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttcttata 35584013  T
Q  114 ataaggatcggagggagta 132  Q
    ||||||| |||||||||||    
T  35584014 ataaggaccggagggagta 35584032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 13831994 - 13831874
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | || |||||||||||||||||||||||||||||||||||| |||||||    
T  13831994 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttatacaatgaaccaaaaaagttaattgtttctta 13831895  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| || ||||||||    
T  13831894 taataaggaccgaagggagta 13831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 29690467 - 29690585
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29690467 tgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttcttata 29690566  T
Q  114 ataaggatcggagggagta 132  Q
    ||||||| |||||| ||||    
T  29690567 ataaggaccggaggaagta 29690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 34604810 - 34604930
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||| | | |||||||||||||||||||||||||||||||| | |||| |||||||    
T  34604810 gttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaaatcaattgtttctta 34604909  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  34604910 taataaggaccggagggagta 34604930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 45372734 - 45372854
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||| | | ||||||||||||||| ||| |||| ||||||||| |||| || ||||    
T  45372734 gttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacattgaatcaaaaaagtcaattgttactta 45372833  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  45372834 taataaggaccggagggagta 45372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 7548610 - 7548496
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |   || |||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  7548610 tttttaggttcatagaataattaatgcatcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataa 7548511  T
Q  118 ggatcggagggagta 132  Q
    ||| |||||||||||    
T  7548510 ggaccggagggagta 7548496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 44580012 - 44579907
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||| | | |||||| || ||||||||||| || |||||||||||||| |||||||    
T  44580012 gttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagatatattacttatacaataaatcaaaaaagttaattgtttctta 44579913  T
Q  112 taataa 117  Q
    ||||||    
T  44579912 taataa 44579907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 43932167 - 43932048
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || ||||||||||| |||||| || |||||| | | ||||||||||| || ||||||||||| ||||||| |||| ||||||||    
T  43932167 ttgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttat 43932068  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  43932067 aataaggaccggagggagta 43932048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 43292598 - 43292705
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||||| ||||||| || | ||||||||    
T  43292598 ttgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 43292697  T
Q  113 aataagga 120  Q
    ||||||||    
T  43292698 aataagga 43292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 43409951 - 43409833
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    ||||||||| |||| || ||||||||||| || ||  || |||||| | | ||||||||| |||||||||||||||| ||||||| ||||  | ||||||    
T  43409951 tgactttttcggttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttata 43409852  T
Q  114 ataaggatcggagggagta 132  Q
    ||||||| |||||||||||    
T  43409851 ataaggaccggagggagta 43409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 34745287 - 34745400
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||| | ||||| | || | ||||||||    
T  34745287 ttgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttat 34745386  T
Q  113 aataaggatcggag 126  Q
    ||||| ||||||||    
T  34745387 aataaagatcggag 34745400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 38494269 - 38494374
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||  ||| |||||||||||||| |||||| || |||||| ||| |||||||| |||||| ||||| |||| ||||| | |||| ||||||||    
T  38494269 ttgactttttttgttcatagaataattaatgtatcttgttataaatataaattagatacaccacttacacaataaacctaaaaaatcaattttttcttat 38494368  T
Q  113 aataag 118  Q
    ||||||    
T  38494369 aataag 38494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 38298619 - 38298517
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| |||||||||| || ||||||||||| |||||  || |||||| |   ||||||||||||||| |||||||||  ||||||| |||||||||||||    
T  38298619 ttgattttttaggttcattgaataattaatgtatctcgttataaatataggctagatacatcacttacacaatgaacttaaaaagtcaattatttcttat 38298520  T
Q  113 aat 115  Q
    |||    
T  38298519 aat 38298517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 40645812 - 40645721
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||||  ||||||| || | ||||||||||||||||    
T  40645812 atagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaacttaaaaagtcaaatgtttcttataataagga 40645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 45180121 - 45180188
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| || || ||||||||    
T  45180121 tagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaagaccgaagggagta 45180188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 34745322 - 34745256
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  34745322 agatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 34745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 43292633 - 43292567
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  43292633 agatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 43292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 41624850 - 41624737
Alignment:
Q  19 ttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    ||||||||| || ||||||||||  ||| || || |||||| | | || |||||||||||||| || ||||| ||||||| |  | |||||||||||||     
T  41624850 ttttaggttgattgaataattaacgtatgttgttataaatatagactaaatacatcacttatataaggaacctaaaaagtcatatgtttcttataataaa 41624751  T
Q  119 gatcggagggagta 132  Q
    ||||||||||||||    
T  41624750 gatcggagggagta 41624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 9550227 - 9550108
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||  ||||| |||||| |||| |||||  |  |||||| | | |||||||||||||||  |||||||   ||||| | |||||||||||||    
T  9550227 ttgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcacttacccaatgaatttaaaaaatcaattatttcttat 9550128  T
Q  113 aataaggatcggagggagta 132  Q
    ||||| || |||||||||||    
T  9550127 aataaagaccggagggagta 9550108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 43932132 - 43932198
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| ||||||| | ||||||| |||| |||||||||||||||| |||||||||||    
T  43932132 agatacattaattattcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagta 43932198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 8242194 - 8242151
Alignment:
Q  75 acttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    |||||||||||||||||||||||| || | ||||||||||||||    
T  8242194 acttatacaatgaaccaaaaaagtcaactgtttcttataataag 8242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 27108102 - 27107999
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    ||||||| || || |||||||||| ||||||  || |||||||| | ||||||||||| ||| | |||||||  |||| |  |||| |||||||||||||    
T  27108102 tttttagattcattgaataattaacatatctcgttataaatacagattagatacatcatttacataatgaacataaaatgacaattgtttcttataataa 27108003  T
Q  118 ggat 121  Q
    ||||    
T  27108002 ggat 27107999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 9420652 - 9420586
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||||||||||||| | |||| || ||||  | ||||||||||||| |||||||||||    
T  9420652 agatacattacttatacaatgaatctaaaacgtcaattgctgcttataataaggaccggagggagta 9420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 13831958 - 13832024
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  13831958 agatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 13832024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 34604846 - 34604780
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  34604846 agatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 34604780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3236415 - 3236479
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| ||||||||||||  |||||||| || ||||||||||||  | || |||||||||||    
T  3236415 atacatcatttatacaatgaattaaaaaagtcaaatatttcttataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 5356875 - 5356927
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    ||||||||||||||||||||| || | |||||||||| | || ||||||||||    
T  5356875 tagatacatcacttatacaataaatctaaaaagttaactgttgcttataataa 5356927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 8793804 - 8793868
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||| ||||| |||||    
T  8793804 atacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataggaccggagagagta 8793868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 8803313 - 8803377
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| ||||  |||||| |||||||||||| ||||| ||||||  ||||||||||| ||||    
T  8803313 atacatcatttatgtaatgaatcaaaaaagttaaatattttttataaataggatcggaggaagta 8803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 40483346 - 40483282
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| |||||||  ||||||||||| ||||||||||||  |||| |||||| ||||    
T  40483346 atacatcatttatgcaatgaattaaaaaagttaaatatttcttataaataggaccggaggtagta 40483282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 45113853 - 45113731
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||| |||||||||||||||| | |||| |||||||    
T  45113853 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttctta 45113754  T
Q  112 taataaggatcggagggagtaga 134  Q
    ||||||||||| |||||||||||    
T  45113753 taataaggatcagagggagtaga 45113731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 27302198 - 27302078
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  27302198 gttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttatacaatgaaccaaaaaagttaattctttctta 27302099  T
Q  112 taataaggatcggagggagta 132  Q
    |||||| || ||||| |||||    
T  27302098 taataaagaccggagagagta 27302078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 16123792 - 16123893
Alignment:
Q  19 ttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    ||||||||||||| ||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  16123792 ttttaggtttataaaataattaatatatcttattgtaaatatagactagatacattacttatacaatgaaccaaaaaagttaattgttttttataataag 16123891  T
Q  119 ga 120  Q
    ||    
T  16123892 ga 16123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 43901610 - 43901730
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||| | | ||| ||||||| ||| ||||||||||||||||||||||| |||||||    
T  43901610 gttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaaccaaaaaagttaattgtttctta 43901709  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||| ||||    
T  43901710 taataaggaccggaggtagta 43901730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 53284345 - 53284465
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||| ||||||| || ||| |||||||||| |||||||||||||||  | | ||||||||||||||||||||| |||||||||| | |||| |||||||    
T  53284345 gttgattttttagtttcataaaataattaatgtatcttattgtaaatgtagactagatacatcacttatacaataaaccaaaaaaatcaattgtttctta 53284444  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||| ||||    
T  53284445 taataaggaccggaggaagta 53284465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 31376293 - 31376174
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||||| ||||||| || | ||||||||    
T  31376293 ttgacttttttggttcatagaataattaatgtatcttcttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 31376194  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  31376193 aataaggaccggagggagta 31376174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 39617029 - 39616909
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| | ||||||||  |||||| || | ||||||||    
T  39617029 ttgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaaccttaaaagtcaaatgtttcttat 39616930  T
Q  113 aataaggatcggagggagtag 133  Q
    |||||||| ||||||||||||    
T  39616929 aataaggaccggagggagtag 39616909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 53703760 - 53703880
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaa-ttatttctta 111  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| |||||||||| |||| || || || |||||||    
T  53703760 ttgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacctaaaaggtcaacttttttctta 53703859  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  53703860 taataaggaccggagggagta 53703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 50100296 - 50100206
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagg 119  Q
    |||||| ||||||  ||||||||| |||||| | | ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  50100296 atagaaaaattaacgtatcttattataaatatagactagatacatcacttatacaatgaactaaaaaagtcaattgtttcttataataagg 50100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 8769175 - 8769282
Alignment:
Q  24 ggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcg 123  Q
    |||| ||||||| |||||| |||||| || |||||| | | ||||||||||||||| |||||||||  |||||||||| | |||||||||||||||| ||    
T  8769175 ggttcatagaatgattaatgtatcttgttataaatatagattagatacatcacttacacaatgaacttaaaaagttaact-tttcttataataaggaccg 8769273  T
Q  124 gagggagta 132  Q
    |||||||||    
T  8769274 gagggagta 8769282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 21944319 - 21944418
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||||||| |||||||||||||| ||||||| |||| ||| | | |||||||| |||||| |||| ||||||||||| | |||| ||||||||    
T  21944319 ttgactttttaggttcatagaataattaatgtatcttagtgtagatatagactagatacaccacttacacaaggaaccaaaaaaatcaattgtttcttat 21944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 24489415 - 24489324
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||||| || | ||| ||| |||||||| |||||||| ||||||||||||    
T  24489415 atagaataattaatgtatcttatagtaaatataaactagatacatcacctacaaaataaactaaaaaagtcaattattttttataataagga 24489324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 50660057 - 50659948
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||           ||||||||||||| |||||||||||||||| | |||| ||||| |    
T  50660057 gttgactttttagatttatagaataattaatgtatcttattgta-----------gatacatcacttacacaatgaaccaaaaaaatcaattgtttctaa 50659969  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| | |||||||||    
T  50659968 taataaggaccagagggagta 50659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 8764273 - 8764380
Alignment:
Q  24 ggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcg 123  Q
    |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| ||||| |||  ||||| | || | |||||||||||||||||||    
T  8764273 ggttcatagaataattaatgtatcttgttataaatatagattagatacatcacttacacaataaacttaaaaaatcaact-tttcttataataaggatcg 8764371  T
Q  124 gagggagta 132  Q
    |||||||||    
T  8764372 gagggagta 8764380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 2544491 - 2544606
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaat-acaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataa 114  Q
    |||||||||||| || |||||||| || |||||| || ||||| | | |  | ||||||||||||||||||||| | ||||||| |||| |||||| |||    
T  2544491 actttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaa 2544590  T
Q  115 taaggatcggagggag 130  Q
    |||||| |||||||||    
T  2544591 taaggaccggagggag 2544606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 53703795 - 53703729
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  53703795 agatacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 53703729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 48643722 - 48643609
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || ||||||||||| ||| |  || |||||| | | ||||||||| ||||| || || |||| ||||||| |||| ||||||||    
T  48643722 ttgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttat 48643623  T
Q  113 aataaggatcggag 126  Q
    |||||||| |||||    
T  48643622 aataaggaccggag 48643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 2544491 - 2544435
Alignment:
Q  77 ttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagtag 133  Q
    |||| ||||||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  2544491 ttattcaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtag 2544435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 43449043 - 43449107
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||||||||||||||||||| | || ||||||||||||  ||||||| ||||||||    
T  43449043 atacatcatttatacaatgaaccaaaaaaatcaaatatttcttataaataggatcgaagggagta 43449107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 31376258 - 31376324
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  31376258 agatacattaattattctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagta 31376324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 39616994 - 39617060
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  39616994 agatacattaattattctatgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagta 39617060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 42896207 - 42896141
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||| |||| ||||||||| ||||||| ||||  |||||||||||| || |||||||||||    
T  42896207 agatacatcagttattcaatgaacctaaaaagtgaattgcttcttataataaagaccggagggagta 42896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 19227409 - 19227457
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||||| | |||| |||||||||||||||| |||||||||||    
T  19227409 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 19227457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25313341 - 25313289
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||||||| |||||||||| ||||| | |||||||| ||||||||||||    
T  25313341 atacatcacttacacaatgaacctaaaaaatcaattattttttataataagga 25313289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 51517042 - 51517106
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||||||||||||| || | ||||||||||  |||| |||||||||||    
T  51517042 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagggagta 51517106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 36191521 - 36191483
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatc 122  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  36191521 atgaaccaaaaaagtcaattgtttcttataataaggatc 36191483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 45113817 - 45113883
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  45113817 agatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 45113883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 19227426 - 19227326
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||| ||| | ||| |||  ||||||| || | ||||||||    
T  19227426 ttgatttttttggttcatagaataattaatttatcttgttataaatatagactagatacatcatttacataataaacttaaaaagtcaaatgtttcttat 19227327  T
Q  113 a 113  Q
    |    
T  19227326 a 19227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 21662971 - 21663035
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| |||||||||||| | ||||||||||  | || |||||||||||    
T  21662971 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 36191504 - 36191614
Alignment:
Q  13 ttgactttttaggtttatagaataat---taatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttct 109  Q
    |||||||||| |||| ||||||||||   |||| |||||| || || ||| | | ||||||||||||||| | |||||||| ||||  | || || ||||    
T  36191504 ttgacttttttggttcatagaataatgattaatgtatcttgttatatatatagactagatacatcacttacataatgaacctaaaagatcaaataattct 36191603  T
Q  110 tataataagga 120  Q
    |||||||||||    
T  36191604 tataataagga 36191614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 42896227 - 42896279
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||| |||| ||||||||  ||||||| |||| ||||||||||||||||    
T  42896227 atacatcagttattcaatgaacgtaaaaagtgaattgtttcttataataagga 42896279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 44118301 - 44118197
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || ||   ||||||||| ||| || || |||||| | | ||||||||||| ||| |||||||| | ||||||| || |||||| |||    
T  44118301 ttgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttacacaatgaatctaaaaagtcaaatatttcctat 44118202  T
Q  113 aataa 117  Q
    |||||    
T  44118201 aataa 44118197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 46220412 - 46220456
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacat 73  Q
    |||||||||||||| |||||||||||||||| | | |||||||||    
T  46220412 atagaataattaatgtatcttattgtaaatatatactagatacat 46220456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 53441970 - 53441906
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || | ||||||||||  |||| |||||||||||    
T  53441970 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagta 53441906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 41395781 - 41395661
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  41395781 gttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttatacaatgaattaaaaaagttaattgtttctta 41395682  T
Q  112 taataaggatcggagggagta 132  Q
    |||||||||||||| ||||||    
T  41395681 taataaggatcggaaggagta 41395661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 41487820 - 41487940
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||| |||||||||||||||| | |||| |||||||    
T  41487820 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttctta 41487919  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| |||||||||||    
T  41487920 taataaggaccggagggagta 41487940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 47280292 - 47280173
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | || |||||| | |||||||||||| |||||||||||||| |||||||    
T  47280292 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaa-caaaaaagttaattgtttctta 47280194  T
Q  112 taataaggatcggagggagta 132  Q
    |||||| ||||||||||||||    
T  47280193 taataaagatcggagggagta 47280173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 45123274 - 45123379
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||  || |||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  45123274 gttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaatgaatcaaaaaagttaattatttctta 45123373  T
Q  112 taataa 117  Q
    ||||||    
T  45123374 taataa 45123379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 27320323 - 27320443
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||||||||| | | |||| |||| |||||||||||||||||||||| | |||| |||||||    
T  27320323 gttgactttttaagttcataaaataattgatatatcttattgtaaatatagactagaaacattacttatacaatgaaccaaaaaaatcaattgtttctta 27320422  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| | |||||||||    
T  27320423 taataaggaccagagggagta 27320443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 47484140 - 47484027
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | | |||||||||||||||  |||||||  |||||| | |||| |||||||    
T  47484140 gttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacgcaatgaataaaaaaaatcaattgtttctta 47484041  T
Q  112 taataaggatcgga 125  Q
    ||||||||| ||||    
T  47484040 taataaggaccgga 47484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 10674153 - 10674269
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||||||| || ||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||| | ||||||| |||| ||||||||    
T  10674153 ttgactttttaggttcattgaataattaatgtatcttgttataaatatagattagatacatcacttacataatgaatctaaaaagtcaattgtttcttat 10674252  T
Q  113 aataaggatcggaggga 129  Q
    |||||||||||||||||    
T  10674253 aataaggatcggaggga 10674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 37006574 - 37006470
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||| ||| |||||||||||||| |||| ||||||||||| ||| | ||||||||||||||||||| ||| |||||||| |||| ||||||||    
T  37006574 ttgactttttaagttcatagaataattaatgtatcatattgtaaatataaactggatacatcacttatacaataaactaaaaaagtcaattgtttcttat 37006475  T
Q  113 aataa 117  Q
    |||||    
T  37006474 aataa 37006470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 22618193 - 22618312
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || || || |||||||| |||||| ||||||||| | | ||||||||||||||| |||||||||| ||||||| |||| ||||||||    
T  22618193 ttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 22618292  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| ||||| |||||    
T  22618293 aataaggaccggagtgagta 22618312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 24164546 - 24164665
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||| |||| |||||||||||||| |||||| ||  ||||| | | ||||||||||||||| | |||||||| ||||||| || | ||||||||    
T  24164546 ttgatttttttggttcatagaataattaatgtatcttgttagaaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 24164645  T
Q  113 aataaggatcggagggagta 132  Q
    ||||||||||||||||||||    
T  24164646 aataaggatcggagggagta 24164665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 47612321 - 47612439
Alignment:
Q  14 tgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||||||||||||| || ||||||||||| |||||  || |||||| | | ||||||||| |||||||||||||||| ||||||| ||||  | ||||||    
T  47612321 tgactttttaggttcattgaataattaatgtatctcgttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttata 47612420  T
Q  114 ataaggatcggagggagta 132  Q
    ||||||| |||||||||||    
T  47612421 ataaggaccggagggagta 47612439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 7456537 - 7456424
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || || |||||||| |||||| ||||||||| | | ||||||||||| |||||||||||| | ||||||| || ||||||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttat 7456438  T
Q  113 aataaggatcggag 126  Q
    |||||||| |||||    
T  7456437 aataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 18064755 - 18064871
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    |||||||| ||| |||||||||||||| |||||||||| ||||| | | ||||||||||||||| ||||||||| ||||| || || | ||||||||| |    
T  18064755 actttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaaacaatgaactaaaaatgtcaactgtttcttatatt 18064854  T
Q  116 aaggatcggagggagta 132  Q
    ||||| |||| ||||||    
T  18064855 aaggaccggatggagta 18064871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 24932454 - 24932518
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  24932454 atacatcacttatacaatgaactaaaaaagttaattgtctcttataataaggatcggagggagta 24932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 29559555 - 29559436
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || ||||||||||| ||| |  || |||||| | | ||||||||| ||||| || ||||||| ||||||| |||| ||||||||    
T  29559555 ttgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgatgaacctaaaaagtcaattgtttcttat 29559456  T
Q  113 aataaggatcggagggagta 132  Q
    ||||||||||||||| ||||    
T  29559455 aataaggatcggaggtagta 29559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 33039680 - 33039572
Alignment:
Q  13 ttgactttttaggtttata--gaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctt 110  Q
    |||||||||||||||||||  ||||||||||| |||| | ||||||||| | | |||||||||| || | |||||||||| ||||||| |||| ||||||    
T  33039680 ttgactttttaggtttatatagaataattaatgtatcatgttgtaaatatagactagatacatccctaacacaatgaacctaaaaagtcaattgtttctt 33039581  T
Q  111 ataataagg 119  Q
     ||||||||    
T  33039580 ttaataagg 33039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 40234862 - 40234765
Alignment:
Q  35 taattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||| || |||||| ||||||||| | | ||||||||||| ||| |||||||| | ||||||| |||| |||||||||||||| | |||||||||||    
T  40234862 taattcatgtatcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccggagggagta 40234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 40198633 - 40198741
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||| | | || ||||||| |||| | ||| ||| |||||||| | || |||||||    
T  40198633 gttgactttttaggttcatagaataattaatgcatcttgttgtaaatatagactaaatacatcgcttacataataaactaaaaaagtcatttgtttctta 40198732  T
Q  112 taataagga 120  Q
    |||| ||||    
T  40198733 taattagga 40198741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 12806937 - 12807004
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcactta 79  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||| | | || ||||||||||||    
T  12806937 gttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactacatacatcactta 12807004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 39413858 - 39413965
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||  || || ||||||||||| |||| | |||||||||   | |||||||||||||||||||||||||  ||||| | |||| ||||||||    
T  39413858 ttgactttttatattaattgaataattaatgtatcatgttgtaaatattgattagatacatcacttatacaatgaacttaaaaaatcaattgtttcttat 39413957  T
Q  113 aataagga 120  Q
    ||| ||||    
T  39413958 aattagga 39413965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 45025624 - 45025743
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| | |||||| | ||||| | || | ||||||||    
T  45025624 ttgatttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttat 45025723  T
Q  113 aataaggatcggagggagta 132  Q
    ||||| || |||||| ||||    
T  45025724 aataaagaccggaggaagta 45025743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 3633274 - 3633328
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||||||||| |||||||||| ||||||| || ||||||||||||||||||    
T  3633274 agatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataagga 3633328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 41088882 - 41088996
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || ||||||||||| ||| |  || |||||| | | ||||||||| ||||| || || |||| ||||||| |||| ||||||||    
T  41088882 ttgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttat 41088981  T
Q  113 aataaggatcggagg 127  Q
    |||||||| ||||||    
T  41088982 aataaggaccggagg 41088996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 13860302 - 13860363
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggga 129  Q
    |||||| | |||||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  13860302 atacattaattatacaatgaatctaaaaagtcaattgtttcttataataaggatcggaggga 13860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 29835199 - 29835099
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    ||||||||| || || |||||||||||||||||  ||||||||| ||| ||||||||||| ||| ||||| || | ||||||| |||| ||| |||||||    
T  29835199 actttttagattcattgaataattaatatatctcgttgtaaatataaattagatacatcatttacacaataaatctaaaaagtcaatt-ttttttataat 29835101  T
Q  116 aa 117  Q
    ||    
T  29835100 aa 29835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 40599998 - 40600055
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcgga 125  Q
    |||||||||||| |||||||||| |||||||||||| || |||||||||| |||||||    
T  40599998 atacatcacttacacaatgaacctaaaaagttaattgttgcttataataaagatcgga 40600055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 3633257 - 3633197
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcgga 125  Q
    ||||||||||||||| | |||||||| ||||||| || | |||||||||||||||| ||||    
T  3633257 tagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 14543298 - 14543414
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || || || |||||||| ||||||  |||||||| | | ||||||||||||||| | ||| |||  ||| | | |||| ||||||||    
T  14543298 ttgattttttagattcattgagtaattaatgtatcttgatgtaaatatagactagatacatcacttacataataaacttaaacaatcaattgtttcttat 14543397  T
Q  113 aataaggatcggaggga 129  Q
    ||||||||||| |||||    
T  14543398 aataaggatcgaaggga 14543414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 31903035 - 31903099
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| | |||| ||||||||| ||||| |||||||||| ||||||||||||| ||| ||||||    
T  31903035 atacattaattattcaatgaacctaaaaaattaattattttttataataaggattggatggagta 31903099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 32811441 - 32811377
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| |||| |||||||||   ||||||||||||||||    
T  32811441 atacatcaattattcaatgaatcaaaaaagtaaattgtttcttatatataggatcggagggagta 32811377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 2680921 - 2680858
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagt 131  Q
    |||||||| ||||| |||||| ||||||||| || ||||||||||||  ||||||| |||||||    
T  2680921 atacatcatttatataatgaatcaaaaaagtcaaatatttcttataaataggatcgaagggagt 2680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 24164581 - 24164518
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggga 129  Q
    |||||||| | |||| | ||||||||||||| | |||| |||||||||||||||| ||||||||    
T  24164581 agatacattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccggaggga 24164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 33901084 - 33901187
Alignment:
Q  29 atagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggaggg 128  Q
    |||||||| ||||| |||||| || |||||| | | ||||||||||| ||| | |||||| | ||||||| || | ||||||||||||| || ||||||     
T  33901084 atagaatagttaatgtatcttgttataaatatagactagatacatcatttacataatgaatctaaaaagtcaaatgtttcttataataaagaccggagga 33901183  T
Q  129 agta 132  Q
    ||||    
T  33901184 agta 33901187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 48949009 - 48948947
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaag--ttaattatttcttataataaggatcggag 126  Q
    |||||||| | |||| | ||||||||||||||  ||||||||||||||||||||||| |||||    
T  48949009 agatacattaattattctatgaaccaaaaaagagttaattatttcttataataaggaccggag 48948947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 13860335 - 13860222
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || | ||||||||| ||| || || |||||| | | ||||||||||| ||| ||||| |||  ||||||| || | ||||||||    
T  13860335 ttgactttttagattcattgtataattaatgtatattgttataaatatagactagatacatca-ttacacaataaacttaaaaagtaaaatgtttcttat 13860237  T
Q  113 aataaggatcggagg 127  Q
    |||||||||| ||||    
T  13860236 aataaggatcagagg 13860222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 41487856 - 41487790
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  41487856 agatacattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 41487790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 45025659 - 45025593
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||| | |||| |||||||||||||||| ||||| |||||    
T  45025659 agatacattaattattctatgaaccaaaaaaatcaattgtttcttataataaggaccggagtgagta 45025593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 7999566 - 7999489
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaacc 90  Q
    ||||||||||||||| ||  ||||||||||  ||||  || |||||| | | ||||||||||||||| ||||||||||    
T  7999566 ttgactttttaggttcattaaataattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacc 7999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 12806955 - 12806907
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  12806955 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 12806907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 28677380 - 28677316
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || | ||||||||||  |||| |||||||||||    
T  28677380 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 28677316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 36245439 - 36245375
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || | ||||||||||  |||| |||||||||||    
T  36245439 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagggagta 36245375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 40198651 - 40198603
Alignment:
Q  84 atgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| ||||||| || | |||||||||||||||| |||||||||||    
T  40198651 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 40198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 41088915 - 41088851
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||| | |||| ||||||| | ||||||| |||| |||||| ||||||||| |||||||||||    
T  41088915 atacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 45977213 - 45977098
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||| | | |||||||||||| |||||||| ||||||||||||||||| |||||||    
T  45977213 gttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaagttaattgtttctta 45977114  T
Q  112 taataaggatcggagg 127  Q
    ||||||||| ||||||    
T  45977113 taataaggaccggagg 45977098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 27687956 - 27687840
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    |||||||| |||||||||||||||||| |||||||||||||||| | | ||||||||||||||| | ||||||| |||||| | ||||||||||||||||    
T  27687956 actttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaactaaaaaattcaattatttcttataat 27687857  T
Q  116 aaggatcggagggagta 132  Q
    ||| | |||||||||||    
T  27687856 aagaaccggagggagta 27687840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 44224299 - 44224418
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| |   |||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  44224299 ttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttgtacaatgaaccaaaaaaattaattattttttat 44224398  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||  |||| ||||||    
T  44224399 aataagggccggacggagta 44224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 29438168 - 29438287
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||| | | ||||||||||||||| ||||||||| |||||||| |||| ||||||||    
T  29438168 ttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacaatgaactaaaaaagtcaattgtttcttat 29438267  T
Q  113 aataaggatcggagggagta 132  Q
    || || || |||||| ||||    
T  29438268 aacaatgagcggaggtagta 29438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 13320422 - 13320302
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| |   || |||||||| ||| ||||| ||| |||||| |||||| |||||||    
T  13320422 gttgactttttagattcatagaataattaatatatcttattgtaaatatagtttaaatacatcatttacacaataaacaaaaaaaattaattgtttctta 13320323  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||| | |||||||||||    
T  13320322 taataagaaccggagggagta 13320302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 52279353 - 52279233
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttctta 111  Q
    ||||||||||||| || ||| ||||||||||||||||||||||||||| | | | ||||||||||||| |||||||||||||||| | ||||  |||| |    
T  52279353 gttgactttttagattcatataataattaatatatcttattgtaaatatagacttgatacatcacttacacaatgaaccaaaaaaatcaattgcttctaa 52279254  T
Q  112 taataaggatcggagggagta 132  Q
    ||||||||| | |||||||||    
T  52279253 taataaggaccagagggagta 52279233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 51590460 - 51590579
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||| |||| |||||||||||||| |||||| || |||||| | | ||||||||||||||| |||||||| | |||| || || | ||||||||    
T  51590460 ttgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaatctaaaaggtcaactttttcttat 51590559  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  51590560 aataaggaccggagggagta 51590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 13770741 - 13770858
Alignment:
Q  15 gactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataa 114  Q
    |||| ||||| || |||||||||||||| |||||||||||||||| | | ||||||||||||||| ||||| ||  |||||||| || | ||||||||||    
T  13770741 gactatttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaataaattaaaaaagtaaactgtttcttataa 13770840  T
Q  115 taaggatcggagggagta 132  Q
    |||| | |||||||||||    
T  13770841 taagaaccggagggagta 13770858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 34174982 - 34174885
Alignment:
Q  35 taattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||||| ||| ||||| ||| || |||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  34174982 taattaatgtatcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggatcggatggagta 34174885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 19998441 - 19998553
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||  || || || ||||||||||||||| ||||||||| | | ||||||||||||||| |||||||| | ||||| | |||| ||||||||    
T  19998441 ttgactttttatattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgtttcttat 19998540  T
Q  113 aataaggatcgga 125  Q
    |||||||| ||||    
T  19998541 aataaggaccgga 19998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 48565557 - 48565676
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||| |||| |||||||||||||  |||||| || |||||| | | || ||||||||| || |||||||||  |||||||||| | ||||||||    
T  48565557 ttgatttttttggttcatagaataattaaagtatcttgttataaatatagactaaatacatcacctacacaatgaacttaaaaagttaactttttcttat 48565656  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  48565657 aataaggaccggagggagta 48565676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 13321747 - 13321863
Alignment:
Q  16 actttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataat 115  Q
    ||||||| |||||||| |||||||||| |||||| || |||||| | | ||||||||||||||| | |||||| | ||||| | || | |||||||||||    
T  13321747 acttttttggtttataaaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataat 13321846  T
Q  116 aaggatcggagggagta 132  Q
    ||||| | |||||||||    
T  13321847 aaggaccagagggagta 13321863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 15699494 - 15699610
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || || || |||||||| |||||| ||||||||| | | ||||||||||||||||||||| |||| ||||| | |||| |||| |||    
T  15699494 ttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttatacaataaacctaaaaattcaattgtttcatat 15699593  T
Q  113 aataaggatcggaggga 129  Q
    ||||||||  |||||||    
T  15699594 aataaggacgggaggga 15699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 52030963 - 52030872
Alignment:
Q  36 aattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagg 127  Q
    ||||||| ||||||||| |||||| ||| ||||||||||||||| || ||||| | ||||| | |||| |||||||||||||||| ||||||    
T  52030963 aattaatgtatcttattataaatataaattagatacatcacttacacgatgaaactaaaaaatcaattttttcttataataaggaccggagg 52030872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 31050280 - 31050387
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| || || |  |||||||| ||| || ||||||||| | | || |||||||||||| ||||| |||| ||||||| |||| ||||||||    
T  31050280 ttgactttttagattcattgtgtaattaatgtattttgttgtaaatatagactaaatacatcacttacacaataaacctaaaaagtcaattgtttcttat 31050379  T
Q  113 aataagga 120  Q
    ||||||||    
T  31050380 aataagga 31050387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 18038770 - 18038837
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||||||| |||||||| | ||||||| || | ||| |||||||||||| |||||||||||    
T  18038770 tagatacatcacttaaacaatgaatctaaaaagtcaaatgttttttataataaggaccggagggagta 18038837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 22182831 - 22182764
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||||||| ||||| || | ||||||| |||| || ||||||||||||| |||||||||||    
T  22182831 tagatacatcacttacacaataaatctaaaaagtcaattgttacttataataaggaccggagggagta 22182764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 29064254 - 29064168
Alignment:
Q  26 tttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttata 113  Q
    |||||| |||||||||||||| |||||||||||| | | || |||||||| |||||||||||| | |||||  ||||| |||||||||    
T  29064254 tttataaaataattaatatattttattgtaaatatagattaaatacatcatttatacaatgaatctaaaaa-ataattttttcttata 29064168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 13321758 - 13321716
Alignment:
Q  87 aaccaaaaaagttaattatttcttataataaggatcggaggga 129  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  13321758 aaccaaaaaagttaattgtttcttgtaataaggatcggaggga 13321716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 18038753 - 18038699
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    ||||||||||||||  ||||||||| ||||||| || ||||||||||||||||||    
T  18038753 agatacatcacttaagcaatgaacctaaaaagtcaaatatttcttataataagga 18038699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 51590495 - 51590429
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| | |||| | ||||||||||||||| |||| ||| |||||||||||| |||||||||||    
T  51590495 agatacattaattattctatgaaccaaaaaagtcaattgttttttataataaggaccggagggagta 51590429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 2351187 - 2351132
Alignment:
Q  77 ttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||| ||||||| |||||||||||| | ||||||||||  ||||||||||||||||    
T  2351187 ttatgcaatgaatcaaaaaagttaaatgtttcttataaataggatcggagggagta 2351132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 9552689 - 9552728
Alignment:
Q  93 aaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  9552689 aaaagttaattgtttcttataataaggatcagagggagta 9552728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 32837665 - 32837712
Alignment:
Q  12 gttgactttttaggtttatagaataattaatatatcttattgtaaata 59  Q
    |||||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  32837665 gttgactttttaggttcatagaataattaatgtattttattgttaata 32837712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 43851047 - 43850948
Alignment:
Q  33 aataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||||||||||||| || |||||| | | ||||||||||||||| | ||| || | ||||||| ||   ||||||||||||| || |||||| ||||    
T  43851047 aataattaatatatcttgttataaatatatattagatacatcacttacataataaatctaaaaagtcaaaagtttcttataataaagaccggaggaagta 43850948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 25238691 - 25238649
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgta 55  Q
    ||||||||||||||| |||||||||||||| |||||| |||||    
T  25238691 ttgactttttaggttcatagaataattaatgtatcttgttgta 25238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 26924298 - 26924362
Alignment:
Q  68 atacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    |||||||| |||| ||||||| ||||||||| || | ||||||||||  |||| |||||||||||    
T  26924298 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 26924362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 52279343 - 52279383
Alignment:
Q  92 aaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| || | ||||||||||||||||||||||||||||    
T  52279343 aaaaagtcaactttttcttataataaggatcggagggagta 52279383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 25727 - 25618
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    |||||| ||| |||||||||||||| ||||||||| |||||| | | ||||||||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  25727 tttttacgttcatagaataattaatgtatcttattataaatatagactagatacatcacttatataataaaccaaaaaagttaattgttttttataataa 25628  T
Q  118 ggatcggagg 127  Q
    ||| ||||||    
T  25627 ggaccggagg 25618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 112941 - 112822
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||||||||||| ||||| ||||||||||| |||||| || |||||| | | ||||||||||| || ||||||||||| |||| || |||| ||||||||    
T  112941 ttgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaacctaaaacgtcaattgtttcttat 112842  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| | |||||||||    
T  112841 aataaggacccgagggagta 112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 26704 - 26585
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttat 112  Q
    |||| ||||||| || || || |||||||| |||||| ||||||||| | | ||||||||||||||| | |||||||| ||||||| |||  ||||||||    
T  26704 ttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacataatgaacctaaaaagtcaatcctttcttat 26605  T
Q  113 aataaggatcggagggagta 132  Q
    |||||||| |||||||||||    
T  26604 aataaggaccggagggagta 26585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 40309 - 40188
Alignment:
Q  13 ttgactttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaa-ttatttctta 111  Q
    |||||||||||| || || || ||||||||||||||| ||||||||| | | ||||||||||||||| |||||||||| ||||| | || || ||| |||    
T  40309 ttgactttttagattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaaatcaatttttttttta 40210  T
Q  112 taataaggatcggagggagtag 133  Q
    ||||||||| ||||| ||||||    
T  40209 taataaggaccggagagagtag 40188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 12248 - 12350
Alignment:
Q  18 tttttaggtttatagaataattaatatatcttattgtaaatacaaagtagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataa 117  Q
    ||||||| ||||| | ||||||||  |||||| ||||||||| |   ||||||||||||| | ||||| |||| ||||||| |||||||| |||||||||    
T  12248 tttttagatttattgtataattaacgtatcttcttgtaaatataggctagatacatcactaacacaataaacctaaaaagtcaattattttttataataa 12347  T
Q  118 gga 120  Q
    |||    
T  12348 gga 12350  T

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Target: scaffold0287 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 12811 - 12757
Alignment:
Q  66 agatacatcacttatacaatgaaccaaaaaagttaattatttcttataataagga 120  Q
    |||||||||||||| |||||||||| ||||||| || ||||||||||||||||||    
T  12811 agatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataagga 12757  T

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Target: scaffold0287; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 12828 - 12888
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatcgga 125  Q
    ||||||||||||||| | |||||||| ||||||| || | |||||||||||||||| ||||    
T  12828 tagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccgga 12888  T

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Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 3891 - 3944
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataag 118  Q
    ||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||    
T  3891 tagatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataag 3944  T

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Target: scaffold0767; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 3858 - 3808
Alignment:
Q  82 caatgaaccaaaaaagttaattatttcttataataaggatcggagggagta 132  Q
    ||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  3858 caatgaatcaaaaaagtcaattgtttcttataataaggaccggagggagta 3808  T

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Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 3306 - 3249
Alignment:
Q  65 tagatacatcacttatacaatgaaccaaaaaagttaattatttcttataataaggatc 122  Q
    ||||||||||||||| |||||||||  ||||||| |||| ||||||||||||||||||    
T  3306 tagatacatcacttacacaatgaacataaaaagtcaattgtttcttataataaggatc 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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