View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2880_low_16 (Length: 448)

Name: NF2880_low_16
Description: NF2880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2880_low_16
NF2880_low_16
[»] chr3 (9 HSPs)
chr3 (91-187)||(14079538-14079634)
chr3 (91-187)||(55441930-55442026)
chr3 (91-177)||(13327679-13327767)
chr3 (29-93)||(12490326-12490391)
chr3 (29-93)||(15874671-15874736)
chr3 (29-93)||(48420178-48420243)
chr3 (18-65)||(11330626-11330673)
chr3 (18-65)||(55442387-55442434)
chr3 (29-90)||(18008729-18008791)
[»] chr6 (7 HSPs)
chr6 (91-187)||(35137111-35137207)
chr6 (91-187)||(33323724-33323820)
chr6 (27-93)||(33323321-33323388)
chr6 (97-168)||(17790567-17790638)
chr6 (27-93)||(18383277-18383344)
chr6 (27-93)||(16889339-16889406)
chr6 (18-58)||(6093013-6093053)
[»] scaffold0028 (2 HSPs)
scaffold0028 (91-168)||(78635-78712)
scaffold0028 (27-64)||(78191-78228)
[»] chr8 (8 HSPs)
chr8 (95-184)||(33612181-33612271)
chr8 (18-93)||(21696056-21696132)
chr8 (27-93)||(39448414-39448481)
chr8 (95-184)||(23227136-23227226)
chr8 (18-93)||(21192338-21192415)
chr8 (18-93)||(23835715-23835791)
chr8 (18-93)||(21199765-21199842)
chr8 (91-147)||(23148849-23148906)
[»] scaffold0058 (2 HSPs)
scaffold0058 (94-187)||(71437-71530)
scaffold0058 (18-93)||(71872-71948)
[»] scaffold0053 (1 HSPs)
scaffold0053 (18-93)||(78426-78502)
[»] chr5 (7 HSPs)
chr5 (18-93)||(7727077-7727153)
chr5 (91-177)||(20833117-20833204)
chr5 (27-93)||(23492511-23492578)
chr5 (18-89)||(13793628-13793701)
chr5 (27-93)||(37189721-37189788)
chr5 (27-72)||(28888424-28888469)
chr5 (29-93)||(32967765-32967830)
[»] scaffold0095 (1 HSPs)
scaffold0095 (27-93)||(7257-7324)
[»] scaffold0022 (1 HSPs)
scaffold0022 (27-93)||(106513-106580)
[»] chr2 (9 HSPs)
chr2 (91-180)||(19658905-19658995)
chr2 (29-93)||(24296175-24296240)
chr2 (18-93)||(25304063-25304140)
chr2 (27-93)||(19670732-19670799)
chr2 (29-93)||(4879-4944)
chr2 (29-93)||(23823111-23823176)
chr2 (29-93)||(23825055-23825120)
chr2 (29-93)||(23832190-23832255)
chr2 (95-184)||(19665626-19665716)
[»] scaffold0786 (2 HSPs)
scaffold0786 (91-184)||(646-739)
scaffold0786 (91-184)||(5701-5794)
[»] scaffold0390 (1 HSPs)
scaffold0390 (91-184)||(4234-4327)
[»] chr7 (3 HSPs)
chr7 (29-93)||(13376181-13376246)
chr7 (18-93)||(13388462-13388539)
chr7 (29-93)||(15914025-15914090)
[»] chr4 (7 HSPs)
chr4 (18-93)||(12245849-12245926)
chr4 (18-93)||(27959528-27959604)
chr4 (95-184)||(7187037-7187127)
chr4 (29-93)||(15852913-15852978)
chr4 (29-93)||(34197762-34197827)
chr4 (94-128)||(5684080-5684114)
chr4 (29-93)||(37958654-37958719)
[»] chr1 (8 HSPs)
chr1 (18-93)||(13378354-13378430)
chr1 (29-93)||(19601689-19601754)
chr1 (95-187)||(22144503-22144596)
chr1 (29-93)||(36357930-36357995)
chr1 (29-93)||(38035214-38035279)
chr1 (91-177)||(8539079-8539167)
chr1 (91-177)||(8604318-8604406)
chr1 (91-177)||(21194118-21194206)
[»] scaffold0195 (2 HSPs)
scaffold0195 (27-93)||(8243-8310)
scaffold0195 (27-93)||(13632-13699)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-93)||(118198-118265)
[»] scaffold0175 (1 HSPs)
scaffold0175 (95-185)||(6258-6349)
[»] scaffold0503 (1 HSPs)
scaffold0503 (90-177)||(10554-10642)
[»] scaffold0507 (1 HSPs)
scaffold0507 (28-89)||(4949-5011)
[»] scaffold0456 (1 HSPs)
scaffold0456 (95-184)||(12061-12151)
[»] scaffold0013 (1 HSPs)
scaffold0013 (18-93)||(33967-34044)


Alignment Details
Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 14079538 - 14079634
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||| |||||||||||||||||||| |||||||||    
T  14079538 gataaatatcatatccaacatctacaattcatcacacaccttcatttagacacataaggctagtcacgaaagattataagacaattggctaaaagaa 14079634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 55442026 - 55441930
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| | | |||| ||| |||||||||||||||| |||||||||    
T  55442026 gataaatatcatatccaacatctataattcatcacacaccttcatttagacaaataaagctagtcacgaaggattataagacaattggctaaaagaa 55441930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 13327767 - 13327679
Alignment:
Q  91 gataaatatcatatccaacatct-acaattcatcacacaccttca-tttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| ||||  ||||||| | | |||| |||||||||||||| |||||    
T  13327767 gataaatatcatatccaacatctaacaattcatcacacatcttcattttagtcacataaagctagtcacgaaagattataagataattg 13327679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 12490391 - 12490326
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatcat-acaaggtcgtcaccttcgat 93  Q
    ||||||||| | |||||||||||||||||| |||||| |||||||  |||||||||||||||||||    
T  12490391 tatgtcccttaacatgacacataaatgcatgtggtaccgaatcatctcaaggtcgtcaccttcgat 12490326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 15874671 - 15874736
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  15874671 tatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 15874736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 48420178 - 48420243
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  48420178 tatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 48420243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 11330673 - 11330626
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtac 65  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  11330673 gcaacaaatgatatatccctaatcatgacacataaatgcatgtggtac 11330626  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 55442434 - 55442387
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtac 65  Q
    |||||||| | |||||||||||||||||||||||||||||| ||||||    
T  55442434 gcaacaaatgttatgtccctaatcatgacacataaatgcatgtggtac 55442387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 18008791 - 18008729
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttc 90  Q
    ||||| ||||| |||||| ||||||||||| |||||||||||||   ||||||||||||||||    
T  18008791 tatgttcctaaacatgacgcataaatgcatgtggtactgaatcacctcaaggtcgtcaccttc 18008729  T

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Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 35137207 - 35137111
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| | | |||| |||||||||||||||||||| |||||||||    
T  35137207 gataagtatcatattcaacatctacaattcatcacacaccttcatttagacacataaggctagtcacgaaagattataagacaattggctaaaagaa 35137111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 33323724 - 33323820
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||| | | |||| |||||||||||||||||||| |||||||||    
T  33323724 gataagtatcatattccacatctacaattcatcacacaccttcatttagacacataaggctagtcacgaaagattataagacaattggctaaaagaa 33323820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 33323321 - 33323388
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  33323321 gatatgtccctaatcatgacacataaatgcatttggtaccgaatcacctcaaggtcgtcaccttcgat 33323388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 17790638 - 17790567
Alignment:
Q  97 tatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattata 168  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||  |  ||||||| |||||||||||    
T  17790638 tatcatatccaacatctacaattcatcacacatcttcatttagccacacgaatttggtcacgaaagattata 17790567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 18383344 - 18383277
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  18383344 gatatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 18383277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 16889406 - 16889339
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||   | |||||||||||||||||    
T  16889406 gatatgtccctaatcatgacacataagtgcatgtggtaccgaatcacctccaggtcgtcaccttcgat 16889339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 6093013 - 6093053
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcat 58  Q
    |||||||| |||| ||||| |||||||||||||||||||||    
T  6093013 gcaacaaatgatacgtcccaaatcatgacacataaatgcat 6093053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 78635 - 78712
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattata 168  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||  |||| || |||||||| |||||||||||    
T  78635 gataattatcatatccaacatctacaattcatcacacatcttcatttagccacacaaagttggtcacgaaagattata 78712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 78191 - 78228
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggta 64  Q
    |||||||||||||||||||||||||||||||| |||||    
T  78191 gatatgtccctaatcatgacacataaatgcatgtggta 78228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 33612271 - 33612181
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||| | |||||||||||||| |||||||||  ||||||| | | |||| |||||||||||||||||||| ||||||    
T  33612271 aatatcatatccaacatccaacaattcatcacacatcttcatttagtcacataaggctagtcacgaaagattataagacaattggctaaaa 33612181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 21696056 - 21696132
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| | ||||   |||||||||||||||||||    
T  21696056 gcaacaaatgatatgtccctaatcatgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgat 21696132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 39448481 - 39448414
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  39448481 gatatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 39448414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 23227226 - 23227136
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||| ||||||| | | |||| ||||| || ||||||||||| ||||||    
T  23227226 aatatcacatccaacatctaacaattcatcacacatcttcatttaatcacataaggctagtcacgaaaggttgtaagacaattggctaaaa 23227136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 21192415 - 21192338
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||    ||||||||||||||||||    
T  21192415 gcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaatcaccttaaggtcgtcaccttcgat 21192338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 23835715 - 23835791
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatcatacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||| |||     |||||||||||||||||||    
T  23835715 gcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaacacctcaaggtcgtcaccttcgat 23835791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 21199842 - 21199765
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||||| ||| |||||||||||||| |||||| ||||||   |||| ||||||||||||||    
T  21199842 gcaacaaaatgatatgtccctaaacatcacacataaatgcatgtggtaccgaatcacctcaagctcgtcaccttcgat 21199765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 23148849 - 23148906
Alignment:
Q  91 gataaatatcatatccaacatct-acaattcatcacacaccttcatttaaacacataa 147  Q
    |||||||||||||| |||||||| ||||||||||||||| | |||||||  |||||||    
T  23148849 gataaatatcatatacaacatctaacaattcatcacacatcatcatttagtcacataa 23148906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 71530 - 71437
Alignment:
Q  94 aaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| |||| | | |||| ||  |||| ||||||||||  |||||||||    
T  71530 aaatatcatatccaacatctacaattcatcacacacctccatttagacaaataaggctagtcacgagggattctaagacaatttgctaaaagaa 71437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 71948 - 71872
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| |||||||||||||| ||||| ||||||||| | ||||||  |||||   |||||||||||| ||||||    
T  71948 gcaacaaatgatatgtccctaattatgacgcataaatgcctgtggtaccaaatcacctcaaggtcgtcacattcgat 71872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 78502 - 78426
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||   |||||| ||||||||||||    
T  78502 gcaacaaatgatatgtccctaaacatgacacataaatgcatgtggtactgaatcacctcaaggttgtcaccttcgat 78426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7727077 - 7727153
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||   |||||||||||||||||||    
T  7727077 gcaacaaatgatatgtccctaatcatgacacgtaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 7727153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 20833204 - 20833117
Alignment:
Q  91 gataaatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||| | | |||| ||| ||| ||||||||||||    
T  20833204 gataaatatcatatccaacatttaacaattcatcacacatcttcatttagacacataaggctagtcacgaatgatcataagacaattg 20833117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 23492511 - 23492578
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  23492511 gatatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 23492578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 13793628 - 13793701
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcacctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||    
T  13793628 gcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacctt 13793701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 37189788 - 37189721
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||||| |||||||||||||||||  |||||| ||||||   |||||||||||||||||||    
T  37189788 gatatgtccctaaacatgacacataaatgcaagtggtaccgaatcacctcaaggtcgtcaccttcgat 37189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 28888424 - 28888469
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca 72  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||    
T  28888424 gatatgtccctaatcatgacgcataaatgcatgtggtaccgaatca 28888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 32967830 - 32967765
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||||   |||||||||||||||||||    
T  32967830 tatgtccctaaacatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 32967765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 7324 - 7257
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  7324 gatatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 7257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 106580 - 106513
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  106580 gatatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 106513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 19658905 - 19658995
Alignment:
Q  91 gataaatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgact 180  Q
    ||||||||||||||||||||| || |||||||||||||| ||| ||||| |||||||| | | |||| ||| ||| |||||||||||||||    
T  19658905 gataaatatcatatccaacatttaacaattcatcacacatctttatttagacacataaggctagtcacgaaggatcataagacaattgact 19658995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 24296240 - 24296175
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  24296240 tatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 24296175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 25304063 - 25304140
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  25304063 gcaacaaaatgatatgtcccttaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 25304140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 19670799 - 19670732
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatc-atacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||||||||||||||| |||| | |||||    |||||||||||||||||||    
T  19670799 gatatgtccctaatcatgacacataaatgcatgtggtgccgaatctcctcaaggtcgtcaccttcgat 19670732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 4944 - 4879
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||| ||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  4944 tatgttcctaaccatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 23823176 - 23823111
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||  |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  23823176 tatgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 23823111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 23825120 - 23825055
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||  |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  23825120 tatgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 23825055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 23832255 - 23832190
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||  |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  23832255 tatgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 23832190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 19665626 - 19665716
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    ||||||| |||||||||||| |||||||||||||| || ||||||| ||||||    | |||| ||||| || ||||||||||| ||||||    
T  19665626 aatatcacatccaacatctaacaattcatcacacatctccatttaatcacataggtctagtcacgaaaggttgtaagacaattggctaaaa 19665716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 646 - 739
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||  || |||| | | ||||  |||| | |||||||||||| ||||||    
T  646 gataaatatcatatccaacatctataattcatcacacaccttcaattagtcatataaggctagtcacaaaaggtcataagacaattggctaaaa 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 5701 - 5794
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||  || |||| | | ||||  |||| | |||||||||||| ||||||    
T  5701 gataaatatcatatccaacatctataattcatcacacaccttcaattagtcatataaggctagtcacaaaaggtcataagacaattggctaaaa 5794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 4234 - 4327
Alignment:
Q  91 gataaatatcatatccaacatctacaattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||  || |||| | | ||||  |||| | |||||||||||| ||||||    
T  4234 gataaatatcatatccaacatctataattcatcacacaccttcaattagtcatataaggctagtcacaaaaggtcataagacaattggctaaaa 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 13376181 - 13376246
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||   |||||||||||||||||||    
T  13376181 tatgtccctaaacatgacacataaatgcatatggtaccgaatcacctcaaggtcgtcaccttcgat 13376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 13388462 - 13388539
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  13388462 gcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 13388539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 15914090 - 15914025
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||||   |||||||||||||||||||    
T  15914090 tatgtccctaagcatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 15914025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 12245926 - 12245849
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  12245926 gcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 12245849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 27959528 - 27959604
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| |||||||||||||||||||||  ||||||||| |||||| ||||||   |||||||||||||||||||    
T  27959528 gcaacaaatgatatgtccctaatcatgacatttaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 27959604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 7187127 - 7187037
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||  || |||| | | |||| |||||||||||||| ||| | ||||||    
T  7187127 aatatcatatccaacatctaacaattcatcacacaccttcatctagtcatataaggctagtcacgaaagattataagataataggctaaaa 7187037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 15852978 - 15852913
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||  |||||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  15852978 tatgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 15852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 34197827 - 34197762
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||||   |||||||||||||||||||    
T  34197827 tatgtccctaaacatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 34197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 5684114 - 5684080
Alignment:
Q  94 aaatatcatatccaacatctacaattcatcacaca 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  5684114 aaatatcatattcaacatctacaattcatcacaca 5684080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 37958719 - 37958654
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||||   ||||||| |||||||||||    
T  37958719 tatgtccctaaacatgacgcataaatgcatgtggtaccgaatcacctcaaggtcatcaccttcgat 37958654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 13378430 - 13378354
Alignment:
Q  18 gcaacaaaagatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||||| ||||||   |||||||||||||||||||    
T  13378430 gcaacaaatgatatgtccctaaacatgacacctaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 13378354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 19601689 - 19601754
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| ||||||| |||||||||| |||||| ||||||   |||||||||||||||||||    
T  19601689 tatgtccctaaacatgacatataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 19601754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 22144596 - 22144503
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaagaa 187  Q
    ||||||||| |||||||||| |||||||||||||| || ||||||  ||||||| | | ||||  |||| |||||||| ||||| | |||||||    
T  22144596 aatatcataaccaacatctaacaattcatcacacatctccatttagtcacataaggctagtcacaaaaggttataagataattggcaaaaagaa 22144503  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 36357995 - 36357930
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||  |||||||||||||||||| |||||| ||||||   ||||||||||| |||||||    
T  36357995 tatgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcatcttcgat 36357930  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 38035279 - 38035214
Alignment:
Q  29 tatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||| || ||||||||||||||| |||||| ||||||   |||||||||||| ||||||    
T  38035279 tatgtccctaaacaagacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacattcgat 38035214  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 8539167 - 8539079
Alignment:
Q  91 gataaatatcatatccaacatct-acaattca-tcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    ||||||||||||||||||||| | |||||||| ||||||| |||||||||  || |||| | | |||| ||||||| |||||| |||||    
T  8539167 gataaatatcatatccaacatataacaattcattcacacatcttcatttagtcatataaggctagtcacgaaagatcataagataattg 8539079  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 8604406 - 8604318
Alignment:
Q  91 gataaatatcatatccaacatct-acaattca-tcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    ||||||||||||||||||||| | |||||||| ||||||| |||||||||  || |||| | | |||| ||||||| |||||| |||||    
T  8604406 gataaatatcatatccaacatataacaattcattcacacatcttcatttagtcatataaggctagtcacgaaagatcataagataattg 8604318  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 21194118 - 21194206
Alignment:
Q  91 gataaatatcatatccaacatcta-caattca-tcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    ||||||||||||||||||||| || ||||||| ||||||| |||||||||  || |||| | | |||| ||||||| |||||| |||||    
T  21194118 gataaatatcatatccaacatatatcaattcattcacacatcttcatttagtcatataaagctagtcacgaaagatcataagataattg 21194206  T

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Target: scaffold0195 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 8310 - 8243
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||   |||||||||||||||||||    
T  8310 gatatgtccctaatcatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 8243  T

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Target: scaffold0195; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 13699 - 13632
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||   |||||||||||||||||||    
T  13699 gatatgtccctaatcatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgat 13632  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 118265 - 118198
Alignment:
Q  27 gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||   |||||||||||||||||||    
T  118265 gatatgtccctaaacatgacacatatatgcatgtggtactgaatcacctcaaggtcgtcaccttcgat 118198  T

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Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 6349 - 6258
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaag 185  Q
    |||||||||||||||||||| |||||||||| ||| ||||| |||  ||||||| | | |||| |||||||| ||||| ||||| |||||||    
T  6349 aatatcatatccaacatctaacaattcatcatacatcttcacttagtcacataaggctagtcacgaaagattgtaagataattggctaaaag 6258  T

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Target: scaffold0503 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 10554 - 10642
Alignment:
Q  90 cgataaatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattg 177  Q
    |||| |||||| ||||||||||||| ||| |||||||||| |||||||||  ||||||| | | ||||  ||||||||||| |||||||    
T  10554 cgattaatatcctatccaacatctaacaaatcatcacacaacttcatttagtcacataaggctagtcactaaagattataaaacaattg 10642  T

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Target: scaffold0507 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 5011 - 4949
Alignment:
Q  28 atatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcacctt 89  Q
    |||||||| ||| |||||||||||||||||| |||||| ||||||   |||||||||||||||    
T  5011 atatgtccttaaacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacctt 4949  T

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Target: scaffold0456 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 12151 - 12061
Alignment:
Q  95 aatatcatatccaacatcta-caattcatcacacaccttcatttaaacacataatgttggtcatgaaagattataagacaattgactaaaa 184  Q
    |||||||||||||||||||| ||| |||||| ||| || ||||||  || |||| | | ||||  ||||||||||||||||||| ||||||    
T  12151 aatatcatatccaacatctaacaaatcatcaaacaactgcatttagtcatataaggctagtcacaaaagattataagacaattggctaaaa 12061  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 33967 - 34044
Alignment:
Q  18 gcaacaaaa-gatatgtccctaatcatgacacataaatgcatatggtactgaatca-tacaaggtcgtcaccttcgat 93  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||| |||||| ||||||   ||| |||||||||||||||    
T  33967 gcaacaaaatgatatatccctaaacatgacacataaatacatgtggtaccgaatcacctcaaagtcgtcaccttcgat 34044  T

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