View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2881_low_5 (Length: 412)
Name: NF2881_low_5
Description: NF2881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2881_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 20 - 402
Target Start/End: Complemental strand, 47707034 - 47706652
Alignment:
| Q |
20 |
taatgataataatattgatattattagtagtgtttatgatgtacttaattgtgatgatatcatgcatgagattctacttcgtgtaccaccatcaactgtc |
119 |
Q |
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| T |
47707034 |
taatgataataatattgatattattagtagtgtttatgatgtacttaattgtgatgatatcatgcatgagattctacttcgtgtaccaccatcaactgtc |
47706935 |
T |
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| Q |
120 |
ttcaaatcaatccttgtgtccaaaagatggctccattttatatgcacttcttcctttcatcgtcgttatttgactcaatggggccaaaattatcgtcaat |
219 |
Q |
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| T |
47706934 |
ttcaaatcaatccttgtgtccaaaagatggctccattttatatgcacttcttcctttcatcgtcgttatttgactcaatggggccaaaattatcgtcaat |
47706835 |
T |
|
| Q |
220 |
tagggttttttgtatgcaactttctgtatcttggaaggcctcgtgatggttatcgtcgtccttcttgggagcctgcacttccgtttttgtccacttgtaa |
319 |
Q |
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| T |
47706834 |
tagggttttttgtatgcaactttctgtatcttggaaggcctcgtgatggttatcgtcgtccttcttgggagcctgcacttccgtttttgtccacttgtaa |
47706735 |
T |
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| Q |
320 |
agagggtgatgatttggtgcgttctggaattctcaaaaaacttggttactttatggattcttataatggtgttatactctctg |
402 |
Q |
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| T |
47706734 |
agagggtgatgatttggtgcgttctggaattctcaaaaaacttggttactttatggattcttgtaatggtgttatactctctg |
47706652 |
T |
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