View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2885-Insertion-1 (Length: 1025)

Name: NF2885-Insertion-1
Description: NF2885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2885-Insertion-1
NF2885-Insertion-1
[»] chr3 (59 HSPs)
chr3 (8-483)||(7766429-7766904)
chr3 (589-979)||(7767011-7767401)
chr3 (606-955)||(46904707-46905053)
chr3 (589-958)||(27303135-27303501)
chr3 (589-958)||(51146886-51147252)
chr3 (598-814)||(42009156-42009369)
chr3 (589-808)||(50677214-50677430)
chr3 (593-768)||(36538126-36538298)
chr3 (589-861)||(51939403-51939672)
chr3 (590-861)||(29387601-29387869)
chr3 (590-957)||(25598833-25599201)
chr3 (589-960)||(28132482-28132851)
chr3 (608-958)||(48626779-48627126)
chr3 (589-705)||(41707055-41707171)
chr3 (589-705)||(52655123-52655239)
chr3 (593-705)||(13401411-13401523)
chr3 (589-705)||(21596283-21596399)
chr3 (589-705)||(21784784-21784900)
chr3 (589-705)||(8364120-8364236)
chr3 (589-705)||(23164572-23164688)
chr3 (589-705)||(46791697-46791813)
chr3 (600-701)||(19965884-19965985)
chr3 (598-698)||(1255057-1255157)
chr3 (613-705)||(18408163-18408255)
chr3 (598-686)||(43905862-43905950)
chr3 (589-693)||(54430500-54430604)
chr3 (642-880)||(40151958-40152193)
chr3 (589-705)||(24252569-24252684)
chr3 (606-693)||(1649843-1649930)
chr3 (589-700)||(23067730-23067841)
chr3 (338-435)||(54017793-54017891)
chr3 (590-705)||(27729769-27729884)
chr3 (340-436)||(41359743-41359841)
chr3 (361-432)||(33803251-33803324)
chr3 (337-436)||(47964890-47964991)
chr3 (360-435)||(54018196-54018273)
chr3 (781-881)||(19965704-19965804)
chr3 (338-436)||(22303931-22304031)
chr3 (592-686)||(4207373-4207465)
chr3 (775-814)||(15998415-15998454)
chr3 (364-436)||(42342092-42342166)
chr3 (338-433)||(42342364-42342461)
chr3 (826-876)||(21596516-21596566)
chr3 (361-436)||(37990638-37990715)
chr3 (358-395)||(1634311-1634348)
chr3 (644-705)||(20762052-20762113)
chr3 (338-390)||(35946652-35946704)
chr3 (912-952)||(42009039-42009079)
chr3 (360-436)||(3135452-3135530)
chr3 (360-435)||(21832343-21832418)
chr3 (349-388)||(25739412-25739451)
chr3 (361-392)||(25755522-25755553)
chr3 (361-400)||(37726616-37726655)
chr3 (363-435)||(37990978-37991052)
chr3 (358-392)||(22304321-22304355)
chr3 (911-957)||(40151883-40151929)
chr3 (361-406)||(9239927-9239972)
chr3 (358-436)||(22304651-22304731)
chr3 (350-436)||(43346779-43346867)
[»] chr4 (54 HSPs)
chr4 (589-960)||(35653728-35654096)
chr4 (589-844)||(22423632-22423886)
chr4 (589-953)||(21791305-21791663)
chr4 (743-960)||(24449198-24449417)
chr4 (613-851)||(10575380-10575615)
chr4 (589-707)||(43154786-43154904)
chr4 (589-878)||(5545277-5545563)
chr4 (589-707)||(24449072-24449192)
chr4 (589-861)||(32130638-32130906)
chr4 (589-705)||(23426166-23426282)
chr4 (608-954)||(55134175-55134519)
chr4 (600-958)||(53011671-53012029)
chr4 (608-705)||(45172645-45172741)
chr4 (589-705)||(27632346-27632462)
chr4 (589-854)||(19661327-19661588)
chr4 (643-861)||(41038252-41038465)
chr4 (589-705)||(29579828-29579944)
chr4 (590-705)||(23256543-23256658)
chr4 (589-814)||(28463482-28463704)
chr4 (613-814)||(44478011-44478210)
chr4 (608-707)||(34982191-34982290)
chr4 (613-705)||(11681742-11681834)
chr4 (613-705)||(11690021-11690113)
chr4 (613-693)||(16072566-16072646)
chr4 (361-436)||(22183261-22183338)
chr4 (338-433)||(36608636-36608732)
chr4 (338-436)||(25483418-25483517)
chr4 (613-705)||(29221621-29221713)
chr4 (361-435)||(2740783-2740857)
chr4 (361-432)||(39404104-39404177)
chr4 (907-969)||(51066050-51066112)
chr4 (361-436)||(54343005-54343082)
chr4 (910-951)||(22423939-22423980)
chr4 (894-951)||(23256847-23256904)
chr4 (363-436)||(36629319-36629394)
chr4 (364-436)||(39792860-39792934)
chr4 (361-436)||(18932746-18932823)
chr4 (361-436)||(23817678-23817755)
chr4 (433-483)||(24448916-24448966)
chr4 (337-436)||(54017568-54017669)
chr4 (361-436)||(55933121-55933198)
chr4 (781-880)||(26328857-26328958)
chr4 (839-879)||(9925292-9925332)
chr4 (371-406)||(3244458-3244493)
chr4 (361-433)||(50002511-50002585)
chr4 (338-436)||(54936278-54936376)
chr4 (610-672)||(26329065-26329127)
chr4 (908-954)||(29221377-29221423)
chr4 (907-957)||(41038515-41038565)
chr4 (351-392)||(1731581-1731621)
chr4 (361-435)||(10246002-10246078)
chr4 (370-436)||(32941129-32941197)
chr4 (361-406)||(43174255-43174300)
chr4 (363-433)||(50459806-50459878)
[»] chr7 (62 HSPs)
chr7 (589-956)||(36438104-36438467)
chr7 (593-946)||(40737760-40738103)
chr7 (589-880)||(26633311-26633599)
chr7 (593-815)||(7366639-7366858)
chr7 (589-880)||(30739071-30739361)
chr7 (589-957)||(1365957-1366322)
chr7 (593-707)||(9479079-9479193)
chr7 (589-771)||(18895334-18895513)
chr7 (590-880)||(32956724-32957003)
chr7 (606-878)||(773713-773983)
chr7 (589-954)||(42311958-42312321)
chr7 (589-959)||(33910012-33910380)
chr7 (589-705)||(26282542-26282658)
chr7 (589-705)||(40001696-40001812)
chr7 (610-880)||(41908147-41908414)
chr7 (598-878)||(3799593-3799865)
chr7 (590-693)||(25061852-25061955)
chr7 (589-707)||(18015580-18015698)
chr7 (643-861)||(12251135-12251350)
chr7 (769-880)||(41852129-41852238)
chr7 (338-436)||(1085593-1085692)
chr7 (821-950)||(7369968-7370097)
chr7 (598-861)||(36796219-36796479)
chr7 (589-705)||(6380084-6380200)
chr7 (613-705)||(7636326-7636418)
chr7 (730-880)||(28589973-28590122)
chr7 (589-705)||(46221703-46221819)
chr7 (340-436)||(30244352-30244449)
chr7 (643-705)||(4099970-4100032)
chr7 (589-705)||(8358294-8358410)
chr7 (589-705)||(44894029-44894145)
chr7 (338-436)||(30245159-30245254)
chr7 (589-861)||(33418964-33419234)
chr7 (643-705)||(11672588-11672650)
chr7 (722-880)||(40841070-40841231)
chr7 (340-436)||(30253574-30253667)
chr7 (361-436)||(6054642-6054719)
chr7 (769-958)||(29730839-29731021)
chr7 (769-958)||(29741926-29742108)
chr7 (362-436)||(7517662-7517738)
chr7 (643-700)||(42161125-42161182)
chr7 (666-878)||(25610091-25610300)
chr7 (642-958)||(44875909-44876218)
chr7 (337-406)||(30244466-30244534)
chr7 (337-406)||(30253684-30253752)
chr7 (338-406)||(30245269-30245336)
chr7 (819-878)||(28105789-28105848)
chr7 (337-406)||(7517771-7517840)
chr7 (337-406)||(7518037-7518106)
chr7 (371-433)||(36534795-36534857)
chr7 (360-433)||(14681595-14681668)
chr7 (780-852)||(21145492-21145562)
chr7 (338-436)||(37533341-37533440)
chr7 (826-879)||(44002762-44002815)
chr7 (364-433)||(34218036-34218107)
chr7 (442-482)||(40740132-40740172)
chr7 (361-433)||(40094773-40094847)
chr7 (361-436)||(22567038-22567115)
chr7 (911-957)||(26633633-26633679)
chr7 (649-703)||(41852302-41852356)
chr7 (350-436)||(45433323-45433410)
chr7 (362-436)||(47129451-47129527)
[»] chr6 (52 HSPs)
chr6 (598-946)||(3748329-3748675)
chr6 (589-878)||(30915191-30915482)
chr6 (666-878)||(6294279-6294490)
chr6 (589-953)||(1092796-1093156)
chr6 (608-959)||(29308216-29308564)
chr6 (643-855)||(21946109-21946315)
chr6 (613-861)||(2618327-2618570)
chr6 (590-705)||(12614716-12614831)
chr6 (593-814)||(57640-57858)
chr6 (598-705)||(19231570-19231676)
chr6 (643-705)||(628095-628157)
chr6 (600-705)||(14893417-14893522)
chr6 (589-705)||(6360708-6360823)
chr6 (589-705)||(31860951-31861065)
chr6 (610-705)||(1690633-1690728)
chr6 (593-861)||(3514698-3514962)
chr6 (775-880)||(11088701-11088807)
chr6 (610-686)||(350383-350459)
chr6 (589-705)||(7525166-7525282)
chr6 (339-436)||(10074341-10074439)
chr6 (589-705)||(29149351-29149467)
chr6 (643-705)||(6754208-6754270)
chr6 (643-705)||(29401142-29401204)
chr6 (590-686)||(31234862-31234956)
chr6 (589-660)||(7341157-7341228)
chr6 (589-648)||(6294227-6294286)
chr6 (362-434)||(12071691-12071765)
chr6 (361-436)||(16454989-16455066)
chr6 (337-436)||(3415540-3415642)
chr6 (338-436)||(16454657-16454756)
chr6 (590-686)||(31243999-31244092)
chr6 (361-434)||(2378210-2378285)
chr6 (374-435)||(12085046-12085109)
chr6 (649-693)||(22503751-22503795)
chr6 (770-880)||(350541-350654)
chr6 (337-435)||(2578419-2578518)
chr6 (911-948)||(22504011-22504048)
chr6 (362-435)||(2579872-2579947)
chr6 (359-436)||(2843637-2843716)
chr6 (338-406)||(10073593-10073660)
chr6 (361-432)||(14748341-14748410)
chr6 (361-434)||(29518587-29518662)
chr6 (361-434)||(29519004-29519079)
chr6 (636-684)||(32056055-32056103)
chr6 (361-434)||(32741263-32741338)
chr6 (362-434)||(1127444-1127518)
chr6 (340-406)||(5832007-5832071)
chr6 (907-958)||(11088832-11088883)
chr6 (907-958)||(31861250-31861301)
chr6 (350-436)||(3058308-3058396)
chr6 (359-392)||(3409788-3409821)
chr6 (781-814)||(19231750-19231783)
[»] chr2 (57 HSPs)
chr2 (589-957)||(39081346-39081708)
chr2 (589-959)||(13997262-13997628)
chr2 (589-952)||(1418858-1419217)
chr2 (598-958)||(29480386-29480744)
chr2 (589-955)||(36059658-36060021)
chr2 (593-835)||(38599354-38599592)
chr2 (659-959)||(17117394-17117691)
chr2 (608-956)||(38985461-38985806)
chr2 (598-962)||(26151493-26151854)
chr2 (589-705)||(19367419-19367535)
chr2 (611-954)||(15457470-15457812)
chr2 (589-861)||(7993580-7993848)
chr2 (767-958)||(1226017-1226208)
chr2 (610-957)||(18172694-18173035)
chr2 (589-705)||(6530607-6530723)
chr2 (589-705)||(18676311-18676427)
chr2 (589-705)||(27302528-27302644)
chr2 (590-705)||(2063754-2063869)
chr2 (589-861)||(42411406-42411674)
chr2 (593-872)||(31273002-31273277)
chr2 (589-705)||(13020371-13020487)
chr2 (589-705)||(41096538-41096654)
chr2 (608-705)||(18916054-18916151)
chr2 (589-705)||(45042337-45042456)
chr2 (598-861)||(45618934-45619192)
chr2 (613-705)||(4855965-4856057)
chr2 (589-705)||(21747230-21747346)
chr2 (598-705)||(34061856-34061963)
chr2 (601-705)||(18482506-18482611)
chr2 (338-436)||(37106006-37106105)
chr2 (610-705)||(1226266-1226362)
chr2 (338-435)||(42514732-42514830)
chr2 (643-705)||(25222325-25222387)
chr2 (722-804)||(38599593-38599675)
chr2 (339-436)||(6421813-6421911)
chr2 (589-644)||(32186211-32186266)
chr2 (360-435)||(6422193-6422270)
chr2 (361-436)||(41283474-41283551)
chr2 (337-406)||(3673182-3673250)
chr2 (590-705)||(12269374-12269488)
chr2 (659-705)||(42759756-42759802)
chr2 (338-436)||(6421467-6421566)
chr2 (769-880)||(12269551-12269663)
chr2 (675-861)||(36481428-36481611)
chr2 (769-958)||(2063932-2064119)
chr2 (911-958)||(41096289-41096336)
chr2 (337-391)||(12349154-12349207)
chr2 (910-956)||(21746983-21747029)
chr2 (361-436)||(36178604-36178681)
chr2 (339-436)||(3672783-3672882)
chr2 (641-686)||(12072498-12072543)
chr2 (613-654)||(13001617-13001658)
chr2 (370-436)||(15880345-15880413)
chr2 (370-436)||(36005888-36005956)
chr2 (365-435)||(40679632-40679704)
chr2 (349-406)||(40733631-40733688)
chr2 (349-435)||(40733965-40734053)
[»] chr1 (61 HSPs)
chr1 (589-959)||(42740058-42740420)
chr1 (593-958)||(26486125-26486477)
chr1 (589-960)||(37873504-37873878)
chr1 (589-958)||(17674104-17674470)
chr1 (589-951)||(22386593-22386953)
chr1 (589-958)||(44836476-44836837)
chr1 (589-959)||(24556754-24557117)
chr1 (632-866)||(13120708-13120939)
chr1 (589-880)||(50371082-50371370)
chr1 (589-881)||(27703361-27703645)
chr1 (589-814)||(10109668-10109890)
chr1 (606-874)||(5560448-5560713)
chr1 (589-705)||(12971354-12971470)
chr1 (589-705)||(25930552-25930668)
chr1 (643-814)||(18127831-18127999)
chr1 (589-861)||(30899604-30899876)
chr1 (643-957)||(9-323)
chr1 (589-872)||(15441238-15441516)
chr1 (589-705)||(6150669-6150785)
chr1 (589-705)||(12884137-12884253)
chr1 (590-705)||(50552444-50552559)
chr1 (589-701)||(38263812-38263924)
chr1 (613-861)||(48722214-48722462)
chr1 (643-705)||(33124630-33124692)
chr1 (767-878)||(9777537-9777649)
chr1 (589-861)||(14084547-14084817)
chr1 (589-705)||(20905287-20905403)
chr1 (613-705)||(51110101-51110193)
chr1 (590-705)||(52055501-52055616)
chr1 (642-705)||(30004907-30004970)
chr1 (589-705)||(17487283-17487399)
chr1 (614-705)||(28885671-28885762)
chr1 (589-814)||(29207992-29208214)
chr1 (373-435)||(66100-66162)
chr1 (337-436)||(32168673-32168774)
chr1 (338-435)||(22077472-22077570)
chr1 (364-436)||(3875333-3875407)
chr1 (600-662)||(31369432-31369494)
chr1 (338-436)||(34649520-34649620)
chr1 (337-399)||(41157112-41157176)
chr1 (907-960)||(51109846-51109899)
chr1 (642-698)||(3907472-3907528)
chr1 (610-705)||(9777382-9777478)
chr1 (589-705)||(1269507-1269615)
chr1 (590-705)||(6333516-6333630)
chr1 (643-686)||(32810370-32810413)
chr1 (361-436)||(41142454-41142532)
chr1 (362-433)||(3537599-3537672)
chr1 (338-421)||(22077806-22077890)
chr1 (337-399)||(44290434-44290495)
chr1 (337-391)||(50051665-50051718)
chr1 (338-436)||(26661499-26661598)
chr1 (793-878)||(39080451-39080535)
chr1 (340-436)||(26661877-26661974)
chr1 (798-861)||(33124489-33124551)
chr1 (361-436)||(14318949-14319026)
chr1 (361-436)||(31767160-31767237)
chr1 (349-399)||(41157496-41157546)
chr1 (365-436)||(48588491-48588564)
chr1 (910-959)||(18127687-18127736)
chr1 (362-436)||(41759565-41759641)
[»] chr5 (54 HSPs)
chr5 (590-959)||(17325793-17326160)
chr5 (589-959)||(138092-138458)
chr5 (598-951)||(18873410-18873766)
chr5 (645-957)||(7390152-7390460)
chr5 (735-956)||(16515596-16515817)
chr5 (589-880)||(10033494-10033787)
chr5 (589-958)||(43511566-43511935)
chr5 (612-880)||(20975956-20976221)
chr5 (598-880)||(42291707-42291988)
chr5 (589-958)||(3349479-3349844)
chr5 (589-880)||(27351297-27351585)
chr5 (643-957)||(13423866-13424178)
chr5 (589-961)||(10591022-10591389)
chr5 (598-707)||(16515481-16515590)
chr5 (589-814)||(4734476-4734698)
chr5 (589-705)||(40956261-40956377)
chr5 (643-861)||(12661311-12661524)
chr5 (598-705)||(19099314-19099421)
chr5 (608-880)||(29156157-29156426)
chr5 (589-705)||(13656155-13656274)
chr5 (589-880)||(17513764-17514052)
chr5 (589-705)||(26377774-26377890)
chr5 (598-705)||(5829342-5829447)
chr5 (613-705)||(13474602-13474694)
chr5 (361-436)||(36568568-36568643)
chr5 (589-853)||(40779140-40779399)
chr5 (769-878)||(23069350-23069458)
chr5 (589-702)||(36718570-36718683)
chr5 (338-434)||(1028493-1028591)
chr5 (600-688)||(23069179-23069267)
chr5 (818-879)||(4177374-4177435)
chr5 (644-952)||(33281677-33281981)
chr5 (818-878)||(13288617-13288677)
chr5 (361-436)||(42405597-42405672)
chr5 (350-436)||(6500532-6500619)
chr5 (615-683)||(931354-931422)
chr5 (642-686)||(37029051-37029095)
chr5 (908-955)||(41612987-41613034)
chr5 (337-436)||(18603096-18603196)
chr5 (361-436)||(26590909-26590986)
chr5 (337-399)||(27502012-27502073)
chr5 (361-436)||(32487475-32487552)
chr5 (350-436)||(6500904-6500991)
chr5 (767-880)||(8379271-8379383)
chr5 (767-880)||(19099141-19099253)
chr5 (370-436)||(34753033-34753101)
chr5 (338-406)||(624310-624378)
chr5 (360-399)||(3295343-3295382)
chr5 (911-957)||(931636-931682)
chr5 (360-406)||(35150819-35150865)
chr5 (361-436)||(40296314-40296391)
chr5 (361-435)||(15370182-15370258)
chr5 (831-880)||(16061085-16061134)
chr5 (818-879)||(17463019-17463080)
[»] chr8 (51 HSPs)
chr8 (589-855)||(3628600-3628863)
chr8 (590-959)||(42076056-42076423)
chr8 (743-960)||(35874998-35875217)
chr8 (659-867)||(36514996-36515202)
chr8 (589-878)||(32098007-32098294)
chr8 (589-953)||(34523709-34524067)
chr8 (624-841)||(29372340-29372554)
chr8 (589-707)||(35874872-35874992)
chr8 (589-864)||(39697782-39698054)
chr8 (589-880)||(43926152-43926439)
chr8 (627-954)||(12531545-12531871)
chr8 (613-705)||(3471572-3471664)
chr8 (598-705)||(5869322-5869427)
chr8 (591-705)||(18420609-18420723)
chr8 (608-705)||(23567274-23567371)
chr8 (590-705)||(30915287-30915403)
chr8 (589-705)||(43968070-43968186)
chr8 (613-861)||(13585271-13585515)
chr8 (590-705)||(44665046-44665161)
chr8 (339-436)||(3669769-3669867)
chr8 (589-705)||(7858033-7858149)
chr8 (613-705)||(27074546-27074638)
chr8 (643-861)||(1004060-1004272)
chr8 (643-705)||(18112118-18112180)
chr8 (643-700)||(42951774-42951831)
chr8 (801-954)||(33452916-33453065)
chr8 (361-436)||(40518153-40518230)
chr8 (363-436)||(34834958-34835033)
chr8 (364-436)||(3038292-3038366)
chr8 (338-436)||(9309437-9309535)
chr8 (433-483)||(35874716-35874766)
chr8 (362-436)||(5915949-5916025)
chr8 (338-436)||(20995393-20995492)
chr8 (338-436)||(30441167-30441266)
chr8 (359-436)||(6651576-6651655)
chr8 (360-433)||(45122709-45122784)
chr8 (370-434)||(9507866-9507932)
chr8 (907-958)||(39697695-39697746)
chr8 (361-399)||(3037968-3038006)
chr8 (642-684)||(5971777-5971819)
chr8 (929-959)||(12268372-12268402)
chr8 (911-961)||(18420352-18420402)
chr8 (610-684)||(33452760-33452834)
chr8 (350-433)||(41129073-41129157)
chr8 (781-814)||(3574920-3574953)
chr8 (336-434)||(3670144-3670242)
chr8 (370-436)||(5420733-5420801)
chr8 (361-398)||(6876861-6876898)
chr8 (340-393)||(9309108-9309160)
chr8 (793-878)||(12268754-12268838)
chr8 (894-958)||(13585555-13585620)
[»] scaffold0126 (1 HSPs)
scaffold0126 (589-702)||(16658-16771)
[»] scaffold0606 (2 HSPs)
scaffold0606 (605-707)||(8393-8495)
scaffold0606 (787-880)||(8248-8336)
[»] scaffold0181 (1 HSPs)
scaffold0181 (643-705)||(17132-17194)
[»] scaffold0564 (1 HSPs)
scaffold0564 (666-880)||(1086-1299)
[»] scaffold0100 (1 HSPs)
scaffold0100 (613-705)||(46173-46265)
[»] scaffold0034 (1 HSPs)
scaffold0034 (820-952)||(99092-99226)
[»] scaffold0391 (1 HSPs)
scaffold0391 (338-393)||(1660-1714)
[»] scaffold0702 (1 HSPs)
scaffold0702 (361-424)||(146-211)


Alignment Details
Target: chr3 (Bit Score: 415; Significance: 0; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 483
Target Start/End: Original strand, 7766429 - 7766904
Alignment:
Q  8 ataatgaacaccctttaattcaaaattgatgctcattgcttaggcaaatttgatttcagaaaaatgccatttagtaatcgatttagagaccggaaataat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7766429 ataatgaacaccctttaattcaaaattgatgctcattgcttaggcaaatttgatttcagaaaaatgccatttagtaatcgattaagagaccggaaataat 7766528  T
Q  108 tggtcactttagagaccgattttaagatcaaaccgtgttgttgttacactgcgctgtaacnnnnnnngagagggcagggattaaaatgacaaaattgtat 207  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  7766529 tggtcaatttagagaccgattttaagatcaaaccgtgttgttgttacactgcgctgtaactttttttgagagggcagggattaaaatgacaaaattgtat 7766628  T
Q  208 aaagtgataagtagcgggcaaagatcgaagtataacttctatgaaatttcaaattgaaaatattctaaattgcacttttatttgaaatatgtacatgtat 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7766629 aaagtgataagtagcgggcaaaggtcgaagtataacttctatgaaatttcaaattgaaaatattctaaattgcacttttatttgaaatatgtacatgtat 7766728  T
Q  308 tttcatctcaataaactaagacattgttcttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagagac 407  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7766729 tttcttctcaataaactaagacattgttcttgttgggtcacaaggggagtttagggggaccatctacatcgaggctagaacaaccatacaagtgagagac 7766828  T
Q  408 gccacaatcttacctaacaccttaaggcaggaccggaccctggggagtgcaagagattctaccgaaccgagcctcc 483  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  7766829 gccacaatcttacctaaaaccttaaggcaggaccggatcctggggagtgcaaaagattctaccgaaccgagcctcc 7766904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 589 - 979
Target Start/End: Original strand, 7767011 - 7767401
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7767011 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 7767110  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||         ||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  7767111 gaaagaatcacaacaattatttttttttcttcacataaactattcgttttcccatttcctaagacgtaggagtgacattccaaatgacacagttaggtaa 7767210  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||           
T  7767211 atttcacatctctttcacttaattttattttattttgtttcatgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacaaaaaaa 7767310  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgccttaaggcaatgggtttatg 979  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7767311 tgcgtttttatcttacttgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctaccttaagacaatgggtttatg 7767401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 606 - 955
Target Start/End: Original strand, 46904707 - 46905053
Alignment:
Q  606 tttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  46904707 tttctggacatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaat 46904806  T
Q  706 tannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttca 805  Q
    ||          ||  |||||||  ||  |||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  46904807 tatttcttt---tttgcataaaccttttatttttccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaaatttcacctctctttca 46904903  T
Q  806 cttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact 905  Q
    ||||||||||  || ||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||        ||  ||||||| |||||    
T  46904904 cttaattttattttgttttgtttcatgtttaaaagttcttcttattctgattttttaatgaagcttcgctacacataaaaaattgaatttttattttact 46905003  T
Q  906 cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggcc 955  Q
     |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  46905004 ggaacctattttaaaaatagaaccgagcctcctatttcataggaacggcc 46905053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 589 - 958
Target Start/End: Original strand, 27303135 - 27303501
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | ||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27303135 ctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcatt 27303234  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||||||| |||||||| |||||||||| ||||||||||||||| ||| |||||  ||||||||    
T  27303235 gaaagaatcacaacaattatttcttt---ttcgcataaactatttgttttccc-tttcctacgacgtaggagtgacattc-aaacgacaccattaggtaa 27303329  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagc--tacacacnnnnn 886  Q
    ||||||| |||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |  |||| |          
T  27303330 atttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattctgattttttaatgaagcttaactatacaaaaaaaaa 27303429  T
Q  887 nntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
       || ||||||| ||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27303430 atcgcatttttattttactagaacctattttaaaaatagaaccgagcctcctatttcattggaacggccctg 27303501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 589 - 958
Target Start/End: Original strand, 51146886 - 51147252
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| || ||||| ||||| ||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| |||| |||||| |||    
T  51146886 ctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaatttaaaaaactattttatt 51146984  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||           || ||||||| |||||||||||| |||| |||||  ||| |||||||||||||| ||||| |||||||||    
T  51146985 gaaagaatcacaacaattattttttctc--tcgcataaaccattcgttttcccttttc-tacgacatagaagtgacattccaaacgacaccgttaggtaa 51147081  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacac-acnnnnnn 887  Q
    |||| |  |||||||||||| ||||||  || ||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||| | |           
T  51147082 attttatctctctttcacttcattttattttgttttgtttcgtgtttaagagttcttctgattatgattttttaatgaagcttacctacgcaaaaaaaaa 51147181  T
Q  888 ntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
     | | |||| || ||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51147182 ttacattttaattttattggggtctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 51147252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 598 - 814
Target Start/End: Complemental strand, 42009369 - 42009156
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  42009369 agttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatc 42009270  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacat 797  Q
    ||||||||||          ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| || |  ||||| |||||||||| |    
T  42009269 acaacaattatttcttt---ttcacataaaccattcgttttcccctttcctacgacgtaagagtgacattccaaacgaaatcgttagataaatttcacct 42009173  T
Q  798 ctctttcacttaatttt 814  Q
    |||||||||||| ||||    
T  42009172 ctctttcacttagtttt 42009156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 589 - 808
Target Start/End: Complemental strand, 50677430 - 50677214
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||| ||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50677430 ctagactttagttatactttctggacaaaaatttgttgttatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcatt 50677331  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||  |||||||||||||          ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||    
T  50677330 gaaacaatcacaacaattatttcttt---ttcgcataaacaattcgttttcccctttcctacgatgtaggagtgacattccaaacgaaactgttagataa 50677234  T
Q  789 atttcacatctctttcactt 808  Q
    ||||||  ||||||||||||    
T  50677233 atttcatctctctttcactt 50677214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 593 - 768
Target Start/End: Complemental strand, 36538298 - 36538126
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36538298 actctagttatactttatggacataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaa 36538199  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattc 768  Q
    | |||||||||||||          ||| ||||||| ||||||||||||||||||||||| | |||||||||||||    
T  36538198 gaatcacaacaattatttcttt---ttcgcataaaccattcgttttcccctttcctacgaagcaggagtgacattc 36538126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 589 - 861
Target Start/End: Complemental strand, 51939672 - 51939403
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  51939672 ctagactctagttctcttttttgtacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 51939573  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||||||||||| ||||||||| |||||| | || |  ||| |||||| | |||||| ||||||||| | ||    
T  51939572 gaaagaatcacaacaatca-ttttttttcttcacataaaccattcgttttacccttttccacaacatagaagtgacaaatccaaacgacacagttggtta 51939474  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||||||  |||||||||||||||||   ||| ||  |||| |||||| |||||||||| ||||||| |||||    
T  51939473 aatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctcattctgatttttt 51939403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 590 - 861
Target Start/End: Complemental strand, 29387869 - 29387601
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  29387869 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattg 29387770  T
Q  690 aaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaa 788  Q
    |||| ||||||||||| |         |||| ||||||| ||||||||| |||||| |||| ||  ||||||||| | ||||||  |||| ||||| |||    
T  29387769 aaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttctacaatagaggagtgacaaatccaaacaacaccgttagataa 29387672  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||||||  |||||||||||||||||   ||   || |||| |||||| |||||||||||||||||| |||||    
T  29387671 atttcac--ctctttcacttaattttttttttaattctttcatgtttataagttcttctgattctgatttttt 29387601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 590 - 957
Target Start/End: Complemental strand, 25599201 - 25598833
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || |||||||| |||| ||||||||| |||   ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25599201 tagactctagttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataatcacttaatcagtcaatttgaaaaactatttcattg 25599102  T
Q  690 aaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaa 788  Q
    |||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |   ||||||||| | | |||| ||||| ||||| |||    
T  25599101 aaagaatcacaacaatca---tgttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataa 25599005  T
Q  789 atttcacatctctttcacttaa----ttttaagttattttgtttcgtgtttaaaagttcttctgattctga--ctttttaatgaagcttagctacacacn 882  Q
    |||||||  |||||||||||||    ||||   ||| ||| |||| |||||| ||||||||||||||||||   |||||||||||| |||||||||||      
T  25599004 atttcac--ctctttcacttaatttttttttttttaatttctttcatgtttagaagttcttctgattctgattttttttaatgaagtttagctacaca-a 25598908  T
Q  883 nnnnnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
          | || |||||| |||||   | ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  25598907 aaaaattacg-ttttattttactaaagacctattttaaaaagagagccgagcctcctattttataggaacggccct 25598833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 960
Target Start/End: Complemental strand, 28132851 - 28132482
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||  ||| | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  28132851 ctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccttaatttgtataatcacttaatcagtcaatttggaaagctatttcatt 28132752  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||||||| || ||| | || |   ||||||||| | | |||| ||| | ||||| ||    
T  28132751 gaaagaatcacaacaatca---ttttttcttcgcataaaccattcgttttaccattttccacaacagaggagtgacaagttcaaacgacgccgttagata 28132655  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgact--ttttaatgaagcttagctacacacnnnn 885  Q
    ||||||||  |||||||||||||||||   ||| ||  |||| |||||| |||||||||||||| ||| |  ||||||||||  |||||||||||         
T  28132654 aatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattttgatttcttttaatgaaatttagctacacaaaaaa 28132558  T
Q  886 nnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcc 960  Q
       |    |||||| |||||  |||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||    
T  28132557 aaattatattttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccctgcc 28132482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 608 - 958
Target Start/End: Complemental strand, 48627126 - 48626779
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    ||||||||||||| |||| |||||| || |||  |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |    
T  48627126 tctggacataaatctgatactatcagaccaccgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatca 48627027  T
Q  708 nnnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcac 806  Q
              ||||||||||| ||||||||| ||| |||| ||   | |  |||||| | |||||||||||| |||| |||||||  || ||||||||||    
T  48627026 tttattt---ttcacataaaccattcgtttt-cccattcccacagcggataagtgacaaatccaaatgacactgtta-gtaaattctacctctctttcac 48626932  T
Q  807 ttaattttaagt-tattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact 905  Q
    ||| ||||   | ||||| ||||| |||||| ||| |||||||||||| | ||||| || ||| ||| |||||||        ||||||||||| ||| |    
T  48626931 ttatttttttttgtatttcgtttcatgtttagaagctcttctgattctaatttttttataaagtttaactacaca-aaaaaattgcgtttttattttatt 48626833  T
Q  906 -cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
       ||||||||||||| | ||||||||||||||||||||||||| |||| ||||    
T  48626832 gaaggcctattttaaatagagaaccgagcctcctatttcatagggacggtcctg 48626779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 41707171 - 41707055
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||| |||||||||||||||||||||||||||||||||||||||    
T  41707171 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcatt 41707072  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  41707071 gaaagaatcacaacaat 41707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 52655239 - 52655123
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || | ||||||  ||| ||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  52655239 ctagactctagttctcctttttgtatataaatcggatcctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagctatttcatt 52655140  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  52655139 gaaagaatcacaacaat 52655123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 593 - 705
Target Start/End: Original strand, 13401411 - 13401523
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||||| |||| || ||||| ||| ||| ||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13401411 actctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattggaa 13401510  T
Q  693 ggatcacaacaat 705  Q
    | |||||||||||    
T  13401511 gaatcacaacaat 13401523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 21596283 - 21596399
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | |||| ||||||||||||||||  ||||||||||||| ||   |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21596283 ctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcatt 21596382  T
Q  689 gaaaggatcacaacaat 705  Q
      ||| |||||||||||    
T  21596383 acaagaatcacaacaat 21596399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 21784900 - 21784784
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||| |||||| ||||||||||||||    
T  21784900 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagttaatttggaaagctatttcatt 21784801  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  21784800 gaaagaatcacaacaat 21784784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 8364120 - 8364236
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||||||  ||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| |||| |||||||||    
T  8364120 ctagactcttgttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcatt 8364219  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  8364220 gaaagaatcacaacaat 8364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 23164688 - 23164572
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||||| |||| ||||||||| |||   |||||||||||||||||||||| |||||||| ||  ||||||||||    
T  23164688 ctagactctagttctcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcatt 23164589  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  23164588 gaaagaatcacaacaat 23164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 46791813 - 46791697
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  46791813 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaaactatttcatt 46791714  T
Q  689 gaaaggatcacaacaat 705  Q
    | ||| |||||||||||    
T  46791713 gcaagaatcacaacaat 46791697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 600 - 701
Target Start/End: Complemental strand, 19965985 - 19965884
Alignment:
Q  600 ttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcac 699  Q
    |||| |||| ||||||||||| |||||||||||||| ||   ||||||||||||||||||||| ||| || |||||||||||||||||| |||| |||||    
T  19965985 ttctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaagaatcac 19965886  T
Q  700 aa 701  Q
    ||    
T  19965885 aa 19965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 598 - 698
Target Start/End: Complemental strand, 1255157 - 1255057
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| ||||||||||| |||||||||||||| ||| | |||||||||||| |||||||| ||||||||  |||| |||||||||||||| |||    
T  1255157 agttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaatc 1255058  T
Q  698 a 698  Q
    |    
T  1255057 a 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 613 - 705
Target Start/End: Original strand, 18408163 - 18408255
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  18408163 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaat 18408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 43905950 - 43905862
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    |||||| || ||||||||||||| || | ||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  43905950 agttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 693
Target Start/End: Original strand, 54430500 - 54430604
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||| ||| |||||| |||| || |||||||| ||||| |||||||| |||   |||||||||||||||||||||||||||||||||||| |||||||||    
T  54430500 ctaggctctagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcatt 54430599  T
Q  689 gaaag 693  Q
     ||||    
T  54430600 aaaag 54430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 642 - 880
Target Start/End: Complemental strand, 40152193 - 40151958
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagga-tcacaacaattannnnnnnnncttcacataaactattcgttttcc 740  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||| || |||||||||| |          | | ||||||| ||| |||| ||    
T  40152193 caatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatcatttcttt---tgcgcataaaccatttgttt-cc 40152098  T
Q  741 cctttcctacgatgtaggagtgacat-tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaa 839  Q
    ||||||| || | | |||| ||| |  ||||||  ||||  ||||||||||||||| ||||||||| ||||||||   |||||| ||||| | |||||||    
T  40152097 cctttcccacaacggaggaatgatacatccaaacaacacctttaggtaaatttcacctctctttcatttaatttttt-ttatttcgtttcatatttaaaa 40151999  T
Q  840 gttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||| || ||||||||| |||||||||||||||| |||||||    
T  40151998 gtttttatgattctgattttttaatgaagcttaactacaca 40151958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 24252569 - 24252684
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||| |  ||| ||||||||| ||| | ||||||||||||||||||||||||||||||| |||| ||||||| |    
T  24252569 ctagactctagttcttctttttgtacataa-tcagatcctatcaaaccacccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagt 24252667  T
Q  689 gaaaggatcacaacaat 705  Q
    | ||| |||||||||||    
T  24252668 gcaagaatcacaacaat 24252684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 606 - 693
Target Start/End: Complemental strand, 1649930 - 1649843
Alignment:
Q  606 tttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaag 693  Q
    ||||| ||||||||| || ||||||||||  |||  ||||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  1649930 tttctagacataaatctggtgctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatttcactgaaag 1649843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 589 - 700
Target Start/End: Complemental strand, 23067841 - 23067730
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||| | |||||||||||||||| |||||||||    
T  23067841 ctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatt 23067742  T
Q  689 gaaaggatcaca 700  Q
     |||| ||||||    
T  23067741 taaagaatcaca 23067730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 54017793 - 54017891
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||||  |||||||| |||||||||  ||||||||| ||||||||||||| ||||||  ||||||| ||||| ||||||| || ||||||||||    
T  54017793 tgttgggtcactgggggagcc-agggggaccgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaaggc 54017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 590 - 705
Target Start/End: Complemental strand, 27729884 - 27729769
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || ||||||||  |||  |||||||| |||   ||||||||||||||| |||||| |||||||| ||||| |||| || |    
T  27729884 tagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcg 27729785  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  27729784 aaagaatcacaacaat 27729769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 41359743 - 41359841
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaa--gtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||  |||||||   ||||||||  ||||||||||||||||||||||| ||||  | ||||||||||||| ||||||| || |||||||||||    
T  41359743 ttgggtcactgggggagctcggggggaccgcccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggca 41359841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 33803251 - 33803324
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtga--gagacgccacaatcttacctaacaccttaa 432  Q
    |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| ||||||| || |||||||    
T  33803251 gggggaccgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaa 33803324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 47964890 - 47964991
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaagg 434  Q
    ||||| ||||||||||| ||||| |||||| | |||||||| |||| ||||||| |||| ||||  ||||||||||||| ||||||| || | |||||||    
T  47964890 ttgttaggtcacaagggcagcctggggggaacgtccacatctaggccagaacaatcatataagtgagagagacgccacactcttacccaaaatcttaagg 47964989  T
Q  435 ca 436  Q
    ||    
T  47964990 ca 47964991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 54018196 - 54018273
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||  ||||||||||||||||||||||| |||||  |||||||| ||||| ||||||| || ||||||||||    
T  54018196 agggggaccgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggc 54018273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 781 - 881
Target Start/End: Complemental strand, 19965804 - 19965704
Alignment:
Q  781 ttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga-ctttttaatgaagcttagctacac 879  Q
    ||||||||||||||| |||||||||||| |||||   ||||||  |||| |||||| |||||||||||||| |||  |||||||||||||  ||||||||    
T  19965804 ttaggtaaatttcacctctctttcactt-atttttttttatttcctttcatgtttagaagttcttctgattttgatatttttaatgaagcaaagctacac 19965706  T
Q  880 ac 881  Q
    ||    
T  19965705 ac 19965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 22303931 - 22304031
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||||  ||||   ||||||| ||||| ||||| | || ||||||||||    
T  22303931 tgttaggtcactgggggagccttgggggacaatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggc 22304030  T
Q  436 a 436  Q
    |    
T  22304031 a 22304031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 592 - 686
Target Start/End: Complemental strand, 4207465 - 4207373
Alignment:
Q  592 gactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||| |||||| |||| ||||||  ||||  |||||||||||| | |  ||||||||||||||||||||||| |||||||| |||| |||||||    
T  4207465 gactctagttctcctttttggacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcattcaatttggaaagatatttca 4207373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 814
Target Start/End: Original strand, 15998415 - 15998454
Alignment:
Q  775 acacagttaggtaaatttcacatctctttcacttaatttt 814  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  15998415 acaccgttaggtaaatttcacatctctttcacttaatttt 15998454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 42342092 - 42342166
Alignment:
Q  364 ggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||| |||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || |||||||||||    
T  42342092 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggca 42342166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 42342364 - 42342461
Alignment:
Q  338 tgttgggtcac-aaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||  |||||   |||||||| |||| ||||||| || ||||||||    
T  42342364 tgttgggtcactaaggggagcc-agggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaag 42342461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 826 - 876
Target Start/End: Original strand, 21596516 - 21596566
Alignment:
Q  826 tttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagcta 876  Q
    |||| |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  21596516 tttcatgtttagaagttcttttgattctgattttttaatgaagcttagcta 21596566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 37990638 - 37990715
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||||||||||||||||| || |||||   ||||||| ||||| ||||||| || |||||||||||    
T  37990638 gggggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggca 37990715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 1634311 - 1634348
Alignment:
Q  358 ctagggggaccatccacatcgaggctagaacaaccata 395  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1634311 ctagggggaccgtccacatcgaggctagaacaaccata 1634348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 644 - 705
Target Start/End: Original strand, 20762052 - 20762113
Alignment:
Q  644 atttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||||||||| |||||| |||||| ||  ||||||||||||||| |||| ||||||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaat 20762113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 35946704 - 35946652
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaa 390  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||||||||||    
T  35946704 tgttgggtcactgggggagctttgggggaccgtccacatcgaggctagaacaa 35946652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 912 - 952
Target Start/End: Complemental strand, 42009079 - 42009039
Alignment:
Q  912 tattttaaaaatagaaccgagcctcctatttcataggaacg 952  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  42009079 tattttaaaaatagaaccgaacctcatatttcataggaacg 42009039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 3135452 - 3135530
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||| |||||||||||||||||||||||  |||||    |||||| ||||| ||||| |||| |||||||||||    
T  3135452 agggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggca 3135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 21832343 - 21832418
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||  |||||||||||||||||||||||| |||||   ||||||||||||  ||||||| || ||||||||||    
T  21832343 agggggactgtccacatcgaggctagaacaaccagacaagcaagagagacgccac--tcttacccaaaaccttaaggc 21832418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 388
Target Start/End: Original strand, 25739412 - 25739451
Alignment:
Q  349 aaggggagcctagggggaccatccacatcgaggctagaac 388  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  25739412 aaggggagccttgggggaccgtccacatcgaggctagaac 25739451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 392
Target Start/End: Complemental strand, 25755553 - 25755522
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaacc 392  Q
    ||||||||||||||||||||||||||||||||    
T  25755553 gggggaccatccacatcgaggctagaacaacc 25755522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 37726655 - 37726616
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt 400  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  37726655 gggggaccgtccacatcgaggctagaacaactatacaagt 37726616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 435
Target Start/End: Original strand, 37990978 - 37991052
Alignment:
Q  363 gggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||| |||||||||||||||||||||||| | |||   ||||||| ||||| ||||||| || ||||||||||    
T  37990978 gggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggc 37991052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 22304355 - 22304321
Alignment:
Q  358 ctagggggaccatccacatcgaggctagaacaacc 392  Q
    ||||||||||| |||||||||||||||||||||||    
T  22304355 ctagggggaccgtccacatcgaggctagaacaacc 22304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 911 - 957
Target Start/End: Complemental strand, 40151929 - 40151883
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    |||||||||||| |||  |||||||||||||||||||||||| ||||    
T  40151929 ctattttaaaaagagagtcgagcctcctatttcataggaacgaccct 40151883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 9239972 - 9239927
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||    
T  9239972 gggggaccgtccacatcgaggctagaaaaaccatactaatgagaga 9239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 22304731 - 22304651
Alignment:
Q  358 ctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||  ||||||||||| |||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  22304731 ctagggggactgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 22304651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 43346779 - 43346867
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| | || ||||| ||||||| |||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  43346779 aggggagcttcggaggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 43346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 589 - 960
Target Start/End: Complemental strand, 35654096 - 35653728
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35654096 ctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcatt 35653997  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||| |||    
T  35653996 gaaagaatcacaacaattatttcttt---ttcgcataaactattcgtttttccctttcctacgacgtaggagtgacatttcaaatgacaccgttagataa 35653900  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| |||||||||||||||||||  || ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||           
T  35653899 atttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattcggactttttaatgaagcttaactacacacaaaaaaa 35653800  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcc 960  Q
    || |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||    
T  35653799 tgtgtttttattttactcgggcctatcttaaaaatagaaccgagccttctatttcataggaacggccttgcc 35653728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 589 - 844
Target Start/End: Original strand, 22423632 - 22423886
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||| |||    
T  22423632 ctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatcacttaatcaatcaatttgaaaaactattttatt 22423731  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||| ||||||||          | ||||||||  ||||||||| || |||| |||||  |||||||||||||||||| ||||| ||||| |||    
T  22423732 gaaagaatcaaaacaattatttattttt-tccacataaatcattcgtttttccatttcatacgacataggagtgacattccaaacgacaccgttagataa 22423830  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttct 844  Q
    ||||||| ||| |||||||||||||||  || ||||||||| ||||||||||||||    
T  22423831 atttcacctctgtttcacttaattttattttgttttgtttcatgtttaaaagttct 22423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 589 - 953
Target Start/End: Complemental strand, 21791663 - 21791305
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  21791663 ctagactctagttctcctttctgaacataaatttgatgccatcaaaccaccttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcatt 21791564  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| ||||||||||| |          ||| ||||||| ||| | |||||||||||| |||| | | |||||||| |||||| ||||  |||||||||    
T  21791563 gaaagaatcacaacaatcatttcttt---ttcgcataaaccatttg-tttcccctttcccacgacgaatgagtgacaatccaaacgacattgttaggtaa 21791468  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| ||||||| | || ||||||  ||||||  |||| |||||| |||||||||||||||| | |||||||| ||| |||||| ||||            
T  21791467 atttcacctctctttaaatttattttattttatttcatttcatgtttagaagttcttctgattct-aatttttaataaagtttagctgcaca-gaaaaat 21791370  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacgg 953  Q
    ||| ||| ||| ||||| | |||||||||||||| |||  |||||||| ||||||||||||||||    
T  21791369 tgcatttctattttactggagcctattttaaaaagagagtcgagcctcatatttcataggaacgg 21791305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 743 - 960
Target Start/End: Original strand, 24449198 - 24449417
Alignment:
Q  743 tttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagtt 842  Q
    |||||||||| |||||||||||||| |||||||||  |||||||||| | ||| |||| ||||||||||||||  |||||||||||| ||||||||||||    
T  24449198 tttcctacgacgtaggagtgacatttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaagtt 24449297  T
Q  843 cttctgattctgactttttaatgaagcttagctacac--acnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctat 940  Q
    ||||||||||||| ||||||||||||||||| |||||  |         |||||||||| ||||||| | ||||||||||||||||||||| ||||||||    
T  24449298 cttctgattctgattttttaatgaagcttagttacacaaaaaaaaaaaagcgtttttattttactcgagtctattttaaaaatagaaccgaacctcctat 24449397  T
Q  941 ttcataggaacggccctgcc 960  Q
    ||||||| ||||||||||||    
T  24449398 ttcatagtaacggccctgcc 24449417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 613 - 851
Target Start/End: Complemental strand, 10575615 - 10575380
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnn 712  Q
    |||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||  |||| |||||||||||||  ||||||||||| |         
T  10575615 acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatcatttct 10575516  T
Q  713 nnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaatt 812  Q
         ||| ||||||| |||||||||||||||||| |||| | |||||||||| ||| |||||||| || ||||||||||||  ||| |||||||| |||    
T  10575515 tt---ttcgcataaaccattcgttttcccctttcccacgacggaggagtgacaatccgaatgacaccgtcaggtaaatttcatctctttttcactttatt 10575419  T
Q  813 ttaagttattttgtttcgtgtttaaaagttcttctgatt 851  Q
    |||  |||||| ||||| |||||| ||||||||||||||    
T  10575418 ttattttatttcgtttcatgtttagaagttcttctgatt 10575380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 589 - 707
Target Start/End: Complemental strand, 43154904 - 43154786
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  43154904 ctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcatt 43154805  T
Q  689 gaaaggatcacaacaatta 707  Q
     |||| |||||||||||||    
T  43154804 aaaagaatcacaacaatta 43154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 589 - 878
Target Start/End: Original strand, 5545277 - 5545563
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | |||| || |||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5545277 ctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcatt 5545376  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
     |||| ||||||||||| |          ||| ||||||| ||||||||||||| |||  || | | ||||||||| | | |||| ||||| ||||||||    
T  5545377 aaaagaatcacaacaatcatttattt---ttcgcataaaccattcgttttcccccttctcacaacggaggagtgacaaattcaaacgacaccgttaggta 5545473  T
Q  788 aatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    ||||||||   |||||||||||| ||||   |||||| ||||| |||||| ||||||||||||||||   |||||| |||| ||||||||||    
T  5545474 aatttcac--gtctttcacttaattttttttttatttcgtttcatgtttagaagttcttctgattctatttttttactgaatcttagctaca 5545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 707
Target Start/End: Original strand, 24449072 - 24449192
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccat--caatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || ||  |||||||||||||||||||||| ||||||||||||| |||||||     
T  24449072 ctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataatcacttaatcggtcaatttgaaaaactatttct 24449171  T
Q  687 ttgaaaggatcacaacaatta 707  Q
    | ||||| | |||||||||||    
T  24449172 tagaaagaaccacaacaatta 24449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 589 - 861
Target Start/End: Complemental strand, 32130906 - 32130638
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||| | |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32130906 ctagacactagttcttctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcatt 32130807  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |   ||||||||| | | |||| |||||| |||| ||    
T  32130806 gaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacacaattagata 32130709  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||||  ||||||||||||||||||||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  32130708 aattt--catctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctgatttttt 32130638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 23426282 - 23426166
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23426282 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaagctatttcatt 23426183  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  23426182 gaaagaatcacaacaat 23426166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 608 - 954
Target Start/End: Original strand, 55134175 - 55134519
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    |||||||||||||||| | ||||||||| || | ||||| ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |    
T  55134175 tctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatca 55134274  T
Q  708 nnnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtga-cattccaaatgacacagttaggtaaatttcacatctctttcac 806  Q
              || |||||||  |||||||||||| |||||  | | | |  ||| |  | |||||||||||| |||| |||||||  || ||||||||||    
T  55134275 tttctttt--tttacataaatcattcgttttcccttttcccgcaacggataagtaataaatccaaatgacactgtta-gtaaattctacctctctttcac 55134371  T
Q  807 ttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactc 906  Q
    ||||||||    ||||| ||||| |||||| ||| |||| |||| |||| |||||||| |||||||||||||||        || |||||||| ||| |     
T  55134372 ttaatttttttgtatttcgtttcatgtttagaagctcttttgatcctgattttttaataaagcttagctacaca-aaaaaattgtgtttttattttattg 55134470  T
Q  907 ggg-cctattttaaaaatagaaccgagcctcctatttcataggaacggc 954  Q
    ||| ||||||||||| | ||| ||||||||| ||||||||||| |||||    
T  55134471 gggacctattttaaatagagagccgagcctcatatttcatagggacggc 55134519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 600 - 958
Target Start/End: Original strand, 53011671 - 53012029
Alignment:
Q  600 ttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcac 699  Q
    |||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  53011671 ttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcac 53011770  T
Q  700 aacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatc 798  Q
    |||||| |         |||| ||||||| |||| |||| |||||| | || |   ||||||||| | |||||| ||||| ||||| ||||||||||  |    
T  53011771 aacaatca--tttttttcttcgcataaaccattcattttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--c 53011866  T
Q  799 tctttcacttaa--ttttaagttattttgtttcgtgtttaaaagttcttctgattctga--ctttttaatgaagcttagctacacacnnnnnnntgcgtt 894  Q
    ||||||||||||  ||||   ||| ||  |||| |||||| ||||||||||||||||||   |||||||||||  |||||||||||        | || |    
T  53011867 tctttcacttaatttttttttttaattcctttcatgtttagaagttcttctgattctgattttttttaatgaaatttagctacaca-aaaaaattacg-t 53011964  T
Q  895 tttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    ||||| |||||  | |||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  53011965 tttattttactatgagcctattttaaaaagagagccgagcctcctatttcacaggaacggccctg 53012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 45172741 - 45172645
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||| || | ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  45172741 tctggacataaatctggtactatcaaaccaccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaat 45172645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 27632346 - 27632462
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| || |||||| |||| || ||||||||||||| ||||||||| |||   |||||||||||||||||||| |||||||||||||||||| ||||||    
T  27632346 ctagattctagttctcctttttgtacataaatttgatcctatcaaaccacccctaatttgtataatcacttaattagtcaatttgaaaagctacttcatt 27632445  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||| ||||    
T  27632446 gaaagaatcacatcaat 27632462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 589 - 854
Target Start/End: Original strand, 19661327 - 19661588
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19661327 ctagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatt 19661426  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| | |||||||||           |||  ||||||| ||||||||| |||||| | || |   ||||||||| | |||||| ||||| ||||| ||    
T  19661427 gaaagaaacacaacaat--cctttttttctttgcataaaccattcgttttacccttttccacaacaaaggagtgacaaatccaaacgacaccgttagata 19661524  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctg 854  Q
    ||||||||  |||||||||||||||||   ||| ||  |||| |||||| |||||||||||||||||    
T  19661525 aatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttcttctgattctg 19661588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 643 - 861
Target Start/End: Original strand, 41038252 - 41038465
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| |         |||| ||||||| ||||||||| |||    
T  41038252 aatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttaccc 41038349  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    ||| | || |   ||||||||| | |||||| ||||| ||||| ||||||||||  |||||||||||||||||   ||| ||  |||| |||||| ||||    
T  41038350 ttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttt--tttaattcctttcatgtttagaagt 41038445  T
Q  842 tcttctgattctgacttttt 861  Q
    |||||||||| ||| |||||    
T  41038446 tcttctgattttgatttttt 41038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 29579828 - 29579944
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||| ||| || |||||||| |||| ||||||||| |||   |||||||||||| | |||||||||||| |||||||||||||||| |    
T  29579828 ctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaat 29579927  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  29579928 gaaagaatcacaacaat 29579944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 590 - 705
Target Start/End: Original strand, 23256543 - 23256658
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    |||||||||||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||| ||||||||||||||||||  |||||||||||| ||    
T  23256543 tagactccagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatg 23256642  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  23256643 aaagaatcacaacaat 23256658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 589 - 814
Target Start/End: Complemental strand, 28463704 - 28463482
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  |||  |||||||| |||   |||||||||||||||||||||| |||| ||||||||||||||||||    
T  28463704 ctagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcatt 28463605  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||  ||||||||||| |         |||| ||||||| ||||||||| |||||| | || ||  ||||||||| | | |||| ||||| ||||| ||    
T  28463604 gaaaaaatcacaacaatca--tttttttcttcgcataaaccattcgttttgcccttttccacaatagaggagtgacaaattcaaacgacaccgttagata 28463507  T
Q  788 aatttcacatctctttcacttaatttt 814  Q
    ||||||||  |||||||||||||||||    
T  28463506 aatttcac--ctctttcacttaatttt 28463482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 613 - 814
Target Start/End: Original strand, 44478011 - 44478210
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnn 712  Q
    ||||||||  ||| ||||||||| |||   |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |         
T  44478011 acataaatcagatcctatcaaaccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca-tttt 44478109  T
Q  713 nnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaat 811  Q
        |||| ||||||||||||||||| |||||| | || |   ||||||||| | | |||| ||||| ||||| ||||||||||  ||||||||||||||    
T  44478110 ttttcttcgcataaactattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcac--ctctttcacttaat 44478207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 608 - 707
Target Start/End: Original strand, 34982191 - 34982290
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    ||||||||||||| || | ||| ||||| | |  |||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  34982191 tctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcacaacaatta 34982290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 11681834 - 11681742
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   ||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  11681834 acataaatcggatcctatcaaaccacccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaat 11681742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 11690113 - 11690021
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   ||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  11690113 acataaatcggatcctatcaaaccacccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaat 11690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 613 - 693
Target Start/End: Original strand, 16072566 - 16072646
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaag 693  Q
    ||||||||||||| ||||||||| | |   |||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  16072566 acataaatttgatcctatcaaaccatccctaatttgtataatcatttaatcagtcaatttgaaaaactatttcaatgaaag 16072646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 22183261 - 22183338
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||||||||||||| ||||| | || |||||||||||    
T  22183261 gggggaccgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggca 22183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 36608636 - 36608732
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||| || |||  ||||||| ||||| ||||||| || ||||||||    
T  36608636 tgttgggtcacgaggggagctt-gggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaag 36608732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 25483517 - 25483418
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||||  |||||||| |||| |||| |||||||||||||||||||||||| |||||   ||||||| ||||| ||||||| || ||||||||||    
T  25483517 tgttgggtcactgggggagcc-agggagaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggc 25483419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 29221713 - 29221621
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||| |||| ||||||||| ||  | ||||||||||||||||||| | ||||||||| ||  ||||||||||||| | |||||||||||    
T  29221713 acataaatctgatcctatcaaaccactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaat 29221621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 2740857 - 2740783
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||||| ||||||||||||||||||| |   | ||||||||||||| |||||| ||| ||||||||||    
T  2740857 gggggaccatccatatcgaggctagaacaaccacaagtgagagagacgccacactcttacgtaaaaccttaaggc 2740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 39404177 - 39404104
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaa 432  Q
    |||||||| |||||||||||||||||||||||| |||||   ||||||||||||| ||||||| || |||||||    
T  39404177 gggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaa 39404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 907 - 969
Target Start/End: Complemental strand, 51066112 - 51066050
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgccttaaggcaa 969  Q
    |||||||||||||| | ||||||||||||||||||||||||| ||| ||||| || |||||||    
T  51066112 gggcctattttaaatagagaaccgagcctcctatttcatagggacgtccctgactaaaggcaa 51066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 54343005 - 54343082
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||||||||||||||||||||||  ||||   ||||||| ||||| ||||||| || |||||||||||    
T  54343005 gggggaccatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaaggca 54343082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 910 - 951
Target Start/End: Original strand, 22423939 - 22423980
Alignment:
Q  910 cctattttaaaaatagaaccgagcctcctatttcataggaac 951  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  22423939 cctattttaaaaatagaaccgagactcctatttcataggaac 22423980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 894 - 951
Target Start/End: Original strand, 23256847 - 23256904
Alignment:
Q  894 ttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaac 951  Q
    |||||| ||||| |||||||||||||||| ||| ||||||||||||||||| ||||||    
T  23256847 ttttattttactagggcctattttaaaaagagagccgagcctcctatttcacaggaac 23256904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 36629394 - 36629319
Alignment:
Q  363 gggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||| |||||||||||||||||||||||| |||||   ||||||| ||||| ||||||| || |||||||||||    
T  36629394 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 36629319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 39792860 - 39792934
Alignment:
Q  364 ggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||| |||||||||||||||||||||||| |||||   ||||||| ||||| ||||||| || |||||||||||    
T  39792860 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 39792934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 18932746 - 18932823
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| | ||||||||||||| ||||||||  |||||  ||||||| ||||| |||||||||| |||||||||||    
T  18932746 gggggaccgtacacatcgaggctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggca 18932823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 23817678 - 23817755
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||||||||||||||| || ||   ||||||| ||||| ||||||| || |||||||||||    
T  23817678 gggggaccgtccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggca 23817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 433 - 483
Target Start/End: Original strand, 24448916 - 24448966
Alignment:
Q  433 ggcaggaccggaccctggggagtgcaagagattctaccgaaccgagcctcc 483  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||| |||||    
T  24448916 ggcagggccggaccctggggagtgcaagaggttctactgaaccgaacctcc 24448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 54017568 - 54017669
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||||||  |||||   |||||| |||| |||||||||||||||||||||||| | |||   |||||||  |||| |||||||||| |||||||||    
T  54017568 ttgttgggtcaggagggggagctagggagaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaagg 54017667  T
Q  435 ca 436  Q
    ||    
T  54017668 ca 54017669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 55933121 - 55933198
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||||||||||||||||||  |||||||  ||||||| ||||| ||||||| || || ||||||||    
T  55933121 gggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaaggca 55933198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 781 - 880
Target Start/End: Complemental strand, 26328958 - 26328857
Alignment:
Q  781 ttaggtaaatttcacatctctttcacttaatt-ttaagttattttgtttcgtgtttaaaagttcttctgattctga-ctttttaatgaagcttagctaca 878  Q
    ||||||||||||||| ||||||| |||||||| ||   ||||||  |||| |||||| || ||||||| |||||||  |||||||||||| |||||||||    
T  26328958 ttaggtaaatttcacctctcttttacttaattctttttttatttcttttcatgtttagaaattcttctaattctgatttttttaatgaagtttagctaca 26328859  T
Q  879 ca 880  Q
    ||    
T  26328858 ca 26328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 839 - 879
Target Start/End: Original strand, 9925292 - 9925332
Alignment:
Q  839 agttcttctgattctgactttttaatgaagcttagctacac 879  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  9925292 agttcttctgattctgattttttaataaagcttagctacac 9925332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 406
Target Start/End: Original strand, 3244458 - 3244493
Alignment:
Q  371 ccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3244458 ccacatcgaggctggaacaaccatacaagtgagaga 3244493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 50002585 - 50002511
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||  ||||||||||||||||||||||  ||||||  ||||||| ||||| ||||||| || ||||||||    
T  50002585 gggggaccgcccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaag 50002511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 54936376 - 54936278
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccataca-agtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||  ||||||| | |||||||  |||||||||||||||||||||||| | |  | ||||||| ||||| ||||||| || |||||||||||    
T  54936376 tgttgggtcactgggggagc-tcgggggactgtccacatcgaggctagaacaaccacatagtgagagagacaccacactcttacccaaaaccttaaggca 54936278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 610 - 672
Target Start/End: Complemental strand, 26329127 - 26329065
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaattt 672  Q
    ||||||||||| |||||||| ||||| |||  |||||| |||||||| | |||||||||||||    
T  26329127 tggacataaatctgatgctaccaaaccacctccaatttatataatcattcaatcagtcaattt 26329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 908 - 954
Target Start/End: Complemental strand, 29221423 - 29221377
Alignment:
Q  908 ggcctattttaaaaatagaaccgagcctcctatttcataggaacggc 954  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| |||||    
T  29221423 ggcctattttaaaaagagagccgagcctcctatttcacagggacggc 29221377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 907 - 957
Target Start/End: Original strand, 41038515 - 41038565
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    |||||||||||||||| ||| |||||||||||||||||  || ||||||||    
T  41038515 gggcctattttaaaaagagagccgagcctcctatttcaccgggacggccct 41038565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 1731581 - 1731621
Alignment:
Q  351 ggggagcctagggggaccatccacatcgaggctagaacaacc 392  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  1731581 ggggagcct-gggggaccatccacatcgaggctagaataacc 1731621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 10246078 - 10246002
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||| | |||||||||||||||||||||||| |||||   | ||||| ||||| ||||||| || ||||||||||    
T  10246078 gggggagcgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaaggc 10246002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 32941129 - 32941197
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||||||||||||  |||||   |||||||| |||| ||||||| || |||||||||||    
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggca 32941197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 43174300 - 43174255
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  43174300 gggggaccgtccacatcaaggcttgaacaaccacacaagtgagaga 43174255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 433
Target Start/End: Complemental strand, 50459878 - 50459806
Alignment:
Q  363 gggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    |||||| | |||||||||||||||||||||| |||||   ||||||| ||||  |||||||||| ||||||||    
T  50459878 gggaccgtgcacatcgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaag 50459806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 589 - 956
Target Start/End: Complemental strand, 36438467 - 36438104
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  36438467 ctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcatt 36438368  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| ||||||||||| |          ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  36438367 gaaagaatcacaacaataatttattt---ttcacataaaccattcgttttcccttttcctacgacgtaggagtgacattccaaatgacaccgttaggtaa 36438271  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| | |||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||           
T  36438270 atttcacctatctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattctgattttttaatgaagcttagctacacac-aaaaat 36438172  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccc 956  Q
    ||| ||||||| |||||  |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  36438171 tgcatttttattttactgaggcctattttaaaaatagaaccgagcctcctatttcgtaggtacggccc 36438104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 593 - 946
Target Start/End: Complemental strand, 40738103 - 40737760
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| ||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  40738103 actctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttattgaaa 40738004  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaattt 792  Q
    | ||||||||  ||            || ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  40738003 gaatcacaactttt------------tcgcataaactattcgttttcccctttcctacgacgtaggagtgacatttcaaatgacaccgttaggtaaattt 40737916  T
Q  793 cacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacac---nnnnnnnt 889  Q
    ||| |||||||||||| ||||||  |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||               
T  40737915 cacctctctttcactttattttattttattttgtttcat-tttaaaagttcttttgattctgactttttaatgaagcttagctacacacaaaaaaaaaaa 40737817  T
Q  890 gcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcata 946  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||||||||||||    
T  40737816 gcgtttttattttactcgaatctattttaaaaatagaaccgagcctcctatttcata 40737760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 589 - 880
Target Start/End: Original strand, 26633311 - 26633599
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26633311 ctagactctagttctactttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 26633410  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| ||||||||||| |          ||| ||||||| |||| |||| |||||||| |||| ||| ||||||||||||||| ||||| |||| ||||    
T  26633411 gaaagaatcacaacaatcatttcttt---ttcgcataaaccattcatttttccctttcccacgacgtatgagtgacattccaaacgacaccgttaagtaa 26633507  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||| |||||||||||||||||||  |||||||||||| |||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  26633508 atttcacctctctttcacttaattttattttattttgtttcatgtttagacgttcttctgattctgattttttaatgaagcttagctacaca 26633599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 593 - 815
Target Start/End: Original strand, 7366639 - 7366858
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||| |||||||||||| ||||| |||||||  ||||||||||||| |||||| |||||||    
T  7366639 actctagttccactttctggacataaatttgatgatattaaaccaccatcaatttgaataattacttaatttgtcaatttgaaaaactattttattgaaa 7366738  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaattt 792  Q
    | |||||||||||||          ||| ||||||| |||| |||||||||||||| ||| ||||||||||||||||||| ||||| || ||||||||||    
T  7366739 gaatcacaacaattatttcttt---ttcgcataaaccattcattttcccctttcctgcgacgtaggagtgacattccaaacgacaccgtaaggtaaattt 7366835  T
Q  793 cacatctctttcacttaatttta 815  Q
    ||| |||||||||||||||||||    
T  7366836 cacctctctttcacttaatttta 7366858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 589 - 880
Target Start/End: Original strand, 30739071 - 30739361
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| |||| |||| ||||||||||||||||  ||||||||||||| | | ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  30739071 ctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatcacttaatcagtcaatttgaaaagttatttcatt 30739170  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
     |||| |||||||| || |          ||| ||||||| ||| ||||||||||||   || | |  |||||||| | |||||||||||| ||| ||||    
T  30739171 aaaagaatcacaacgatcatttcctt---ttcgcataaacaattagttttcccctttttcacaacggcggagtgacaaatccaaatgacaccgtttggta 30739267  T
Q  788 aatttcacatctctttcac-ttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    |||||||| |||||||||| || ||||||  ||||||  |||| ||| || |||||||||||||||||| |||||||||||| |||||||||||    
T  30739268 aatttcacctctctttcacttttattttattttatttcatttcatgtatagaagttcttctgattctgattttttaatgaagtttagctacaca 30739361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 589 - 957
Target Start/End: Original strand, 1365957 - 1366322
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||||||||||||||| | ||||||||| || | ||||| ||||||| ||||||||||||||||||||||| ||||||||     
T  1365957 ctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagttatttcata 1366056  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacat-tccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          ||||||||||| |||||||||||||||||| || | | |  | |||||| | |||||||||| |||  |||    
T  1366057 gaaagaatcacaacaatcatttcttt---ttcacataaaccattcgttttcccctttcccacaacggataattgacatattcaaatgacaccgtt-tgta 1366152  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    ||||  || ||||||||||||||||||    ||||| ||||| |||||| ||| |||||||||||||| |||||||| |||||||||||||||           
T  1366153 aattctacctctctttcacttaatttttttgtatttcgtttcatgtttacaagctcttctgattctgattttttaataaagcttagctacaca-aaaaaa 1366251  T
Q  888 ntgcgtttttatcttactcggg-cctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
     | ||||||||| ||| | |||  |||||||||| | ||| |||||||| |||||||||||| ||||||||    
T  1366252 ttacgtttttattttattggggatctattttaaatagagagccgagccttctatttcatagggacggccct 1366322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 593 - 707
Target Start/End: Original strand, 9479079 - 9479193
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  9479079 actctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgttgaaa 9479178  T
Q  693 ggatcacaacaatta 707  Q
    | |||||||||||||    
T  9479179 gaatcacaacaatta 9479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 589 - 771
Target Start/End: Complemental strand, 18895513 - 18895334
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||  | ||||||||||||||| |||||||| || || |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  18895513 ctagactcgagttctacttattagacataaatttgatgttatcaaaccactattaatttgtataatcaattaatcagtcaatttaaaaagttatttcatt 18895414  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaa 771  Q
    ||||| |||||||||||||          ||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  18895413 gaaagaatcacaacaattatttcctt---ttcgcataaacaattcgttttccccttacctacgacgtaggagtgacattccaa 18895334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 590 - 880
Target Start/End: Original strand, 32956724 - 32957003
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||| |||  |||||| |||||||| |||||||||||||||  |||| ||||||||||    
T  32956724 tagactctagttctcctttctggacataaatctgatgctatcaaaccacccccaatttttataatcatttaatcagtcaatttataaagttatttcattg 32956823  T
Q  690 aaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaa 788  Q
    |||| ||||||||||| |          ||| ||||||| |||||||||||||||||| || | | | ||||||| | |||||| ||||| |||||||||    
T  32956824 aaagaatcacaacaatgatttcttt---ttcgcataaaccattcgttttcccctttcccacaacggatgagtgacaaatccaaacgacactgttaggtaa 32956920  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||| | ||||||||||         || ||| ||||| |||||| |||||||| || || ||| ||||||||||||||||||| ||||    
T  32956921 atttcacctatctttcactt---------ttttttggtttcatgtttagaagttcttttggttttgattttttaatgaagcttagcttcaca 32957003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 606 - 878
Target Start/End: Complemental strand, 773983 - 773713
Alignment:
Q  606 tttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||| |||||| |||||||||||||  |||   |||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||||||||    
T  773983 tttctggaaataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaat 773884  T
Q  706 tannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacat-tccaaatgacacagttaggtaaatttcacatctctttc 804  Q
     |           |  ||||||| |||||||||||| ||||| || | | |||||| |||  | |||| ||| | |||||||||||||||||||||||||    
T  773883 cattttttttttgtg-cataaaccattcgttttccc-tttccaacaacggaggagtcacaaattcaaacgacgccgttaggtaaatttcacatctctttc 773786  T
Q  805 acttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    ||||||||||   |||||| ||||| |||||| |||||||||||||| ||| |||||||||||||||| |||||    
T  773785 acttaatttttt-ttatttcgtttcatgtttagaagttcttctgattttgattttttaatgaagcttaactaca 773713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 589 - 954
Target Start/End: Original strand, 42311958 - 42312321
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | ||||  ||||||||||||||| ||||| || ||||| ||| || |||||||||||||||| || |||||||||||||||||||||||||    
T  42311958 ctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcacttgattagtcaatttgaaaagctatttcatt 42312056  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
     |||| ||||||||| | |          ||| | ||||  |||||||||||||||||| || | | | ||| ||| | || ||| ||||| |||| |||    
T  42312057 aaaagaatcacaacagtcatttattt---ttcgcttaaataattcgttttcccctttcc-acaacggatgagcgacaaatctaaacgacaccgttaagta 42312152  T
Q  788 aatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnn 886  Q
    |||||||| |||||||||||||| ||||   |||||| ||||| |||||| |||||||||||||||| | |||||||||||||||| ||||||||         
T  42312153 aatttcacctctctttcacttaattttttttttatttcgtttcatgtttagaagttcttctgattctaattttttaatgaagcttaactacacacaaaaa 42312252  T
Q  887 nntgcgtttttatcttac-tcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggc 954  Q
      || |||||||| ||||   || ||||||||||||| |||  |||| || |||||||||| |||||||    
T  42312253 attgtgtttttattttacagtggacctattttaaaaagagagtcgagtcttctatttcataagaacggc 42312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 959
Target Start/End: Original strand, 33910012 - 33910380
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||||| |||| ||||||||  |||   ||||||||||||| ||||||||||||||||||||||||||||||||    
T  33910012 ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcatt 33910111  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |   |||| | || | |||||| ||||| ||||| ||    
T  33910112 gaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttccacaacagaggaattacaaatccaaacgacaccgttagata 33910209  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga---ctttttaatgaagcttagctacacacnnn 884  Q
    ||||||||  |||||||||||||||||   ||| ||  |||| |||||| ||||| |||| |||||||    |||||||||||| |||||||||||        
T  33910210 aatttcac--ctctttcacttaatttt-ttttaattcctttcatgtttagaagttattcttattctgatttttttttaatgaagtttagctacaca-aaa 33910305  T
Q  885 nnnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
        | || |||||| |||||  |||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||    
T  33910306 atattacg-ttttattttactaggggcctattttaaaaagagagccgagcctcctatttcacagggacggccctgc 33910380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 26282658 - 26282542
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||| |||||||| || | ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  26282658 ctagactttagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 26282559  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  26282558 gaaagaatcacaacaat 26282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 40001812 - 40001696
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||| |||||||| || | ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  40001812 ctagactttagttcttctatctgaacataaatctggtactatcaaaccacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 40001713  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  40001712 gaaagaatcacaacaat 40001696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 610 - 880
Target Start/End: Original strand, 41908147 - 41908414
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattann 709  Q
    ||||||||||| ||||||| |||||| |||  ||||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |      
T  41908147 tggacataaatctgatgctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcatt 41908246  T
Q  710 nnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgaca-ttccaaatgacacagttaggtaaatttcacatctctttcactt 808  Q
            ||| ||||||| | |||| ||| |||||   || | | ||||||||||  |||||| || |  ||||| |||||||||| ||| ||||||||    
T  41908247 tcttt---ttcgcataaac-actcgtattctcctttttcactacggaggagtgacagatccaaacgatatcgttagataaatttcacctctttttcactt 41908342  T
Q  809 aattttaagttattttgtttcgtgtttaaaagttcttctgattctga-ctttttaatgaagcttagctacaca 880  Q
    ||||||   |||||||||||| |||||| ||||| ||||||||||||  ||||||||||||||||| ||||||    
T  41908343 aatttt-ttttattttgtttcatgtttagaagtttttctgattctgatttttttaatgaagcttagttacaca 41908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 598 - 878
Target Start/End: Complemental strand, 3799865 - 3799593
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||||||||  ||||||||||||| |||||| |||  ||| ||||||||||| ||||| || ||||||   |||||||||||||||||| |||    
T  3799865 agttctcctttctggat-taaatttgatgct-tcaaaccacctccaaattgtataatcatttaataagccaattttggaagctatttcattgaaagaatc 3799768  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacat 797  Q
    |||||||| |          | | ||||||| |||||||||     |||| || ||| ||||| |  | |||||| ||||| |||||||||||||||| |    
T  3799767 acaacaatcatttttt----tccgcataaaccattcgttttagaaattcccacaatggaggagcgcaaatccaaacgacaccgttaggtaaatttcacct 3799672  T
Q  798 ctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||||||||||||||   |||||| ||||| |||||| |||||||||||||||||| |||| ||||||| |||||||||    
T  3799671 ctctttcacttaattttt--ttatttcgtttcatgtttagaagttcttctgattctgatttttaaatgaagtttagctaca 3799593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 590 - 693
Target Start/End: Original strand, 25061852 - 25061955
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| ||||||||||| |||||||||||||| |   |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  25061852 tagactctagttcttctttttggacataaatctgatgctatcaaactattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattg 25061951  T
Q  690 aaag 693  Q
    ||||    
T  25061952 aaag 25061955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 589 - 707
Target Start/End: Complemental strand, 18015698 - 18015580
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||| | |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||| |||||||| ||||||||||||||    
T  18015698 ctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctatttcatt 18015599  T
Q  689 gaaaggatcacaacaatta 707  Q
    ||||| |||||||||||||    
T  18015598 gaaagaatcacaacaatta 18015580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 643 - 861
Target Start/End: Complemental strand, 12251350 - 12251135
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |         |||| ||||||| ||||||||| |||    
T  12251350 aatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttaccc 12251253  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    ||| | || |   ||||||||| | |||||| | ||| ||||| ||||||||||  |||||||||||||||||   ||| ||  |||| |||||| ||||    
T  12251252 ttttccacaacagaggagtgacaaatccaaacgtcaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaagt 12251155  T
Q  842 tcttctgattctgacttttt 861  Q
    |||||||||||||| |||||    
T  12251154 tcttctgattctgatttttt 12251135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 769 - 880
Target Start/End: Complemental strand, 41852238 - 41852129
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaag 868  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||   |||||| ||||   |||||||||||||||||||||||| || ||||||||     
T  41852238 caaacgacaccgttagataaatttcacatctctttcacttaattttt--ttatttcgtttgacgtttaaaagttcttctgattctgatttcttaatgaaa 41852141  T
Q  869 cttagctacaca 880  Q
    ||||||||||||    
T  41852140 cttagctacaca 41852129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 1085593 - 1085692
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| || ||||||||||    
T  1085593 tgttgggtcatgaggggagcc-agggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggc 1085691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 821 - 950
Target Start/End: Original strand, 7369968 - 7370097
Alignment:
Q  821 ttttgtttcgtgtttaaaagttcttctgattctgacttttt-aatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgggcctattttaa 919  Q
    ||||||||||| |||||||||| |||||||||||| ||||| |||||||||||| ||||||        |||||||| || ||||| |  | ||||||||    
T  7369968 ttttgtttcgtatttaaaagtttttctgattctgatttttttaatgaagcttagttacacaagaagaattgcgttttgattttactagatc-tattttaa 7370066  T
Q  920 aaatagaaccgagcctcctatttcataggaa 950  Q
    |||||||||||||||||||||||||||||||    
T  7370067 aaatagaaccgagcctcctatttcataggaa 7370097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 598 - 861
Target Start/End: Complemental strand, 36796479 - 36796219
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| || ||||||||  ||| ||||||||| ||| | |||||||||||| |||||||||||||||||| |||  |||||||||||||| |||    
T  36796479 agttctcctttttgtacataaatcggatcctatcaaactacccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatc 36796380  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcaca 796  Q
    |||||||| |         |||| ||||||| ||||||||| |||||| | || |   ||||||||| | || ||| ||||| ||||| ||||||||||     
T  36796379 acaacaatca-ttttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatcaaaacgacaccgttagataaatttcac- 36796282  T
Q  797 tctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
     |||||||||||||||||   ||| ||  |||| |||||| || ||||||||||||||| |||||    
T  36796281 -ctctttcacttaatttttttttaattcatttc-tgtttagaacttcttctgattctgatttttt 36796219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 6380200 - 6380084
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||| ||| |||| ||||||||| |||   |||||||||||||||||||||| |||||||| ||  ||||||||||    
T  6380200 ctagactctagttcttctttttgtacatgaatctgatcctatcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcatt 6380101  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  6380100 gaaagaatcacaacaat 6380084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 7636418 - 7636326
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||| | |||| ||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  7636418 acataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcgcaacaat 7636326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 730 - 880
Target Start/End: Complemental strand, 28590122 - 28589973
Alignment:
Q  730 attcgttttcccctttcctacgatgtaggagtgacat-tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgttt 828  Q
    |||||||||||||||||| || | | ||||||||||  |||||| ||||  |||||||||| ||||| |||||| |||||||||||    |||||  |||    
T  28590122 attcgttttcccctttcccacaacggaggagtgacaaatccaaacgacattgttaggtaaaattcacctctcttccacttaatttttc--tatttcattt 28590025  T
Q  829 cgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    | |||||| || ||||||||||||||| |||||||||||| |||||||||||    
T  28590024 catgtttagaaattcttctgattctgattttttaatgaagtttagctacaca 28589973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 46221819 - 46221703
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||   || ||||||||| |||   |||||||| |||||||||||||||||||||| ||||||||||||||    
T  46221819 ctagactctagttctcttttttgtacataaatcgaatcctatcaaactacccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcatt 46221720  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  46221719 gaaagaatcacaacaat 46221703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 340 - 436
Target Start/End: Complemental strand, 30244449 - 30244352
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtga--gagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||||  ||||| ||||| ||||||| || |||||||||||    
T  30244449 ttgggtcacaaggggagc-tcgggggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggca 30244352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 4099970 - 4100032
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  4099970 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaat 4100032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 8358410 - 8358294
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| |||| || ||||||||  ||| ||||||||| |||   ||||| |||||||||||||||||||||||| ||||| ||| |||||    
T  8358410 ctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttatataatcacttaatcagtcaatttaaaaagttatctcatt 8358311  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  8358310 gaaagaatcacaacaat 8358294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 44894145 - 44894029
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| |||| || ||||||||  ||| |||| |||| |||   |||||||||||||||||||||| |||||||| |||||||||| |||    
T  44894145 ctagactatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctattttatt 44894046  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  44894045 gaaagaatcacaacaat 44894029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 30245254 - 30245159
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| ||||  ||||||| ||||| ||||||| || |||||||||||    
T  30245254 tgttgggtcacgaggggagc-tcgggggaccatccacatcgaggcttgaacaaccacacaa--gagagacaccacactcttacccaaaaccttaaggca 30245159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 589 - 861
Target Start/End: Complemental strand, 33419234 - 33418964
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatca-gtcaatttgaaaagctatttcat 687  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||| | |||||||||||||| ||||||||    
T  33419234 ctagactctagttcttgtttttgtacataaatcggatcctatcaaactacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcat 33419135  T
Q  688 tgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggt 786  Q
    |||||| ||||||| ||| |         |||| ||||||| ||||||||| || ||| |||| |   ||||||||| | |||||| ||||| ||||| |    
T  33419134 tgaaagaatcacaataatca--tttttttcttcgcataaaccattcgttttaccattttctacaacagaggagtgacaaatccaaacgacaccgttagat 33419037  T
Q  787 aaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||||||||  |||||||||||| ||||   ||| ||   ||| |||||| || ||||||||||||||| |||||    
T  33419036 aaatttcac--ctctttcacttattttttttttaattccattcatgtttagaacttcttctgattctgatttttt 33418964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 11672588 - 11672650
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||    
T  11672588 aatttgtataatcacttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaat 11672650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 722 - 880
Target Start/End: Complemental strand, 40841231 - 40841070
Alignment:
Q  722 cataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagtta 820  Q
    ||||||| ||||||||||||||||||||| | | || |||||| | |||||| || ||  ||||| ||||||||| | ||||||| ||| ||||   |||    
T  40841231 cataaaccattcgttttcccctttcctacaacggagaagtgacaaatccaaacgagaccattaggaaaatttcacctatctttcaattatttttttttta 40841132  T
Q  821 ttttgtttcgtgtttaaaagttcttctgattctga--ctttttaatgaagcttagctacaca 880  Q
    ||| ||||| |||||| |||||||||| |||||||   |||||||| |||||||||||||||    
T  40841131 tttcgtttcatgtttagaagttcttctaattctgattttttttaataaagcttagctacaca 40841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 340 - 436
Target Start/End: Complemental strand, 30253667 - 30253574
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| ||||  ||||||| ||||| ||||||| || |||||||||||    
T  30253667 ttgggtcacgaggggagc-tcgggggaccatccacatcgaggcttgaacaaccacacaa--gagagacaccacactcttacccaaaaccttaaggca 30253574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 6054719 - 6054642
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||| ||||||||||||||||||||||  ||||||| ||||| ||||||| || |||||||||||    
T  6054719 gggggaccgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaaggca 6054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 958
Target Start/End: Complemental strand, 29731021 - 29730839
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaag 868  Q
    |||| ||||| |||||||||||||||| ||||||||||| ||||||    | ||| ||||| |||||| ||||| |||||||| ||| |||||||||||     
T  29731021 caaacgacactgttaggtaaatttcacctctctttcact-aatttt----tttttcgtttcatgtttagaagtttttctgattgtgattttttaatgaaa 29730927  T
Q  869 cttagctacacacnnnnnnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||| |            ||||||| |||||  |||||||||||||||| |||  |||||||||||||||||||||||| |||||    
T  29730926 cttagctacaaaaaaaaatt---atttttattttactgggggcctattttaaaaagagagtcgagcctcctatttcataggaacgaccctg 29730839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 958
Target Start/End: Original strand, 29741926 - 29742108
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaag 868  Q
    |||| ||||| |||||||||||||||| ||||||| ||| ||||||    | ||| ||||| |||||| ||||| |||||||| ||| |||||||||||     
T  29741926 caaacgacactgttaggtaaatttcacctctcttttact-aatttt----tttttcgtttcatgtttagaagtttttctgattgtgattttttaatgaaa 29742020  T
Q  869 cttagctacacacnnnnnnntgcgtttttatcttactcggg-cctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||| |           |||||||| ||||| ||| ||||||||||||| |||  |||||||||||||||||||||||| |||||    
T  29742021 cttagctacaaaaaaaaatt---gtttttattttactgggggcctattttaaaaagagagtcgagcctcctatttcataggaacgaccctg 29742108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 7517738 - 7517662
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaagtgag--agacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||||||||||||||||||| |||||||||  |||| ||||| ||||||| || |||||||||||    
T  7517738 ggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggca 7517662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 42161182 - 42161125
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcaca 700  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  42161182 aatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcaca 42161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 666 - 878
Target Start/End: Original strand, 25610091 - 25610300
Alignment:
Q  666 tcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgaca 765  Q
    |||||||||||||  ||||||||||||| ||||||||||| |          ||||||||||| | | |||||||||||||| || ||| |   ||||||    
T  25610091 tcaatttgaaaagtcatttcattgaaagaatcacaacaatcatttcttt---ttcacataaaccaatagttttcccctttcccacaatggataggtgaca 25610187  T
Q  766 t-tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaat 864  Q
      |||||| ||||| ||||| ||||||  |  ||||||||||||||||||    ||||| ||||| |||||  ||| |||||||||||||| ||||||||    
T  25610188 aatccaaacgacaccgttag-taaattctatctctctttcacttaatttttttgtatttcgtttcatgtttggaagctcttctgattctgattttttaat 25610286  T
Q  865 gaagcttagctaca 878  Q
     |||||||||||||    
T  25610287 aaagcttagctaca 25610300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 642 - 958
Target Start/End: Complemental strand, 44876218 - 44875909
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttccc 741  Q
    |||||| || ||||| |||||||||||||||  |||||||||||||| |||| ||||||||||| |          | | ||||||| ||||||||| ||    
T  44876218 caatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcatttttt----tccgcataaaccattcgtttt-cc 44876124  T
Q  742 ctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaa 839  Q
    |||||| || ||| ||||||||| | |||||| |||||  ||||||||||||||  |||||||||||||| ||||   ||||||  |||| |||||| ||    
T  44876123 ctttcc-acaatgaaggagtgacaaatccaaacgacac-tttaggtaaatttcatctctctttcacttaattttttttttatttcatttcatgtttagaa 44876026  T
Q  840 gttcttctgattctga-ctttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcggg-cctattttaaaaatagaaccgagcctcc 937  Q
    ||||||   |||||||  |||||||||||| ||||||||| |        | | ||||||| ||| | ||| ||||||||||||| |||  |||||||||    
T  44876025 gttctt---attctgatttttttaatgaagtttagctaca-aaaataaaatacatttttattttagtagggacctattttaaaaagagagtcgagcctcc 44875930  T
Q  938 tatttcataggaacggccctg 958  Q
    ||||||||||| |||||||||    
T  44875929 tatttcatagggacggccctg 44875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 30244534 - 30244466
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||||||  |||||||||| | |||||| |||||||||||||| ||||||||| ||||||||||||    
T  30244534 ttgttgggtcatgaggggagcct-gagggaccgtccacatcgaggcttgaacaaccacacaagtgagaga 30244466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 30253752 - 30253684
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||||||  |||||||||| |||||||  |||||||||||||| ||||||||| ||||||||||||    
T  30253752 ttgttgggtcatgaggggagcct-gggggacagtccacatcgaggcttgaacaaccacacaagtgagaga 30253684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 30245336 - 30245269
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||||| ||||||||| | |||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  30245336 tgttgggtcataaggggagcat-gggggaccgtccacattgaggcttgaacaaccacacaagtgagaga 30245269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 819 - 878
Target Start/End: Original strand, 28105789 - 28105848
Alignment:
Q  819 tattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    ||||| ||||| |||||||||||| |||||||||| | || |||||||||||||||||||    
T  28105789 tatttcgtttcatgtttaaaagtttttctgattctaatttcttaatgaagcttagctaca 28105848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 7517840 - 7517771
Alignment:
Q  337 ttgttgggtcaca-aggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||||  ||||||||| ||||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  7517840 ttgttgggtcactgaggggagccaagggg-accacccatatcgaggctagaacaaccacacaagtgagaga 7517771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 7518106 - 7518037
Alignment:
Q  337 ttgttgggtcaca-aggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||||  ||||||||| ||||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  7518106 ttgttgggtcactgaggggagccaagggg-accacccatatcgaggctagaacaaccacacaagtgagaga 7518037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 371 - 433
Target Start/End: Original strand, 36534795 - 36534857
Alignment:
Q  371 ccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||| ||||||| || ||||||||    
T  36534795 ccacatcgaggctggaacaaccacacttgtgagagacgccacactcttacccaaaaccttaag 36534857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Complemental strand, 14681668 - 14681595
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaag 433  Q
    |||| |||| |||||||| ||||||||||||||| ||  ||||||||| ||||| ||||||| || ||||||||    
T  14681668 agggagaccgtccacatcaaggctagaacaaccacacttgtgagagacaccacactcttacccaaaaccttaag 14681595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 852
Target Start/End: Original strand, 21145492 - 21145562
Alignment:
Q  780 gttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattc 852  Q
    |||||||||||||||| || |||||||||||||||   |||||| ||||| ||| ||||||||||||| ||||    
T  21145492 gttaggtaaatttcacctccctttcacttaatttt--tttatttcgtttcatgtataaaagttcttctaattc 21145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 37533341 - 37533440
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| ||||||||   |||||||| |||||||||||||||||||||||  |||||    |||||| ||||| ||||||| || ||||||||||    
T  37533341 tgttgggtcacgaggggagcgc-gggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggc 37533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 826 - 879
Target Start/End: Complemental strand, 44002815 - 44002762
Alignment:
Q  826 tttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacac 879  Q
    |||| |||||| |||||||||||||| | | |||||||||||||||||||||||    
T  44002815 tttcatgtttagaagttcttctgattataattttttaatgaagcttagctacac 44002762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 433
Target Start/End: Original strand, 34218036 - 34218107
Alignment:
Q  364 ggaccatccacatcgaggctagaacaaccatacaa--gtgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||| |||||||||||||| ||||||||||||||  | ||||||| ||||| ||||||| || ||||||||    
T  34218036 ggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaag 34218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 40740172 - 40740132
Alignment:
Q  442 ggaccctggggagtgcaagagattctaccgaaccgagcctc 482  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  40740172 ggaccctggggagtgcaagaggctctaccgaaccgagcctc 40740132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 433
Target Start/End: Original strand, 40094773 - 40094847
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||  ||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || ||||||||    
T  40094773 gggggaccgaccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaag 40094847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 22567038 - 22567115
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||||||||||||||  ||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  22567038 gggggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggca 22567115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 911 - 957
Target Start/End: Original strand, 26633633 - 26633679
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    |||||||||||||||| | |||| |||||||| ||||||||||||||    
T  26633633 ctattttaaaaatagagctgagcatcctatttgataggaacggccct 26633679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 703
Target Start/End: Complemental strand, 41852356 - 41852302
Alignment:
Q  649 tataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaaca 703  Q
    |||||||||||| ||||||||||| || || |||||||||||||| ||| |||||    
T  41852356 tataatcacttactcagtcaatttaaagagttatttcattgaaagaatcgcaaca 41852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 45433410 - 45433323
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||| |||||||||  ||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || | |||||||||    
T  45433410 aggggagcc-agggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggca 45433323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 47129527 - 47129451
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||| ||||||||||||||||| |||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  47129527 ggggaccgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 47129451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 598 - 946
Target Start/End: Complemental strand, 3748675 - 3748329
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  3748675 agttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatc 3748576  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacat 797  Q
    ||||||||||           |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  3748575 acaacaattatttctttg---tcacataaactattcgttttcccctttcatgcgacgtaggagtgacattccaaatgacaccgttaggtaaatttcacat 3748479  T
Q  798 ctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacac-nnnnnnntgcgtttt 896  Q
    ||||||||||||||||||  || |||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||        ||| ||||    
T  3748478 ctctttcacttaattttattttgttttatttcatatttaaaagttcttctgattttgactttttaatgaagcttagctacacacaaaaaaaatgcatttt 3748379  T
Q  897 tatcttactcgggcctattttaaaaatagaaccgagcctcctatttcata 946  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3748378 tattttactcggacctattttaaaaatagaaccgagcctcctatttcata 3748329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 589 - 878
Target Start/End: Complemental strand, 30915482 - 30915191
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  30915482 ctagactctagttctactttctggacataaatttgatgctatcaaacccccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaatt 30915383  T
Q  689 gaaaggatcacaacaat--tannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggt 786  Q
    ||||| |||||||||||  |           ||| ||||||| |||| || ||||||||| ||||| |||| ||||||||| |||| ||||| |||| ||    
T  30915382 gaaagaatcacaacaatcatttctttaatttttcgcataaaccattcattatcccctttcttacgacgtagaagtgacatttcaaacgacaccgttatgt 30915283  T
Q  787 aaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||| |  |||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||    
T  30915282 aaattttatctctctttcacttaattttattttattttgtttcatgtttataagttcttctgattctgattttttaatgaagcttaactaca 30915191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 666 - 878
Target Start/End: Original strand, 6294279 - 6294490
Alignment:
Q  666 tcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgaca 765  Q
    |||||||||||||| ||||||||||||| ||||||||||| |          ||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttcttt---ttcgcataaactattcgttttcccctttcccacgacgtaggagtgaca 6294375  T
Q  766 ttccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga--ctttttaa 863  Q
    ||||||| ||||| |||||||||||||||| |||||||||| ||||||||  |||||||||||| |||||| |||||||| |||||||||   |||||||    
T  6294376 ttccaaacgacaccgttaggtaaatttcacctctctttcacataattttattttattttgtttcatgtttagaagttcttttgattctgattttttttaa 6294475  T
Q  864 tgaagcttagctaca 878  Q
    |||||||||||||||    
T  6294476 tgaagcttagctaca 6294490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 589 - 953
Target Start/End: Complemental strand, 1093156 - 1092796
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||||||||||||||| | ||||||||| || | ||||| ||||||| ||| ||||||||||||| ||||||||||||| |    
T  1093156 ctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagctatttca-t 1093058  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          ||||||||||| |||||||||||||||||| |  | | |  |||||| | |||||||||||| |||| |||    
T  1093057 gaaagaatcacaacaatcatttcttt---ttcacataaaccattcgttttcccctttcccaaaacggataagtgacaaatccaaatgacaccgtta-gta 1092962  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    ||||  |||||||||||||||||||||    ||||| ||||| |||||| ||| |||| ||||||| | |||||||| ||||||||||||| |           
T  1092961 aattctacatctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttttgattctaattttttaataaagcttagctacata-aaaaaa 1092863  T
Q  888 ntgcgtttttatcttactcg-ggcctattttaaaaatagaaccgagcctcctatttcataggaacgg 953  Q
     ||||||||||| ||| | | ||||||||||||| | ||||||||||||||||||||||||| ||||    
T  1092862 ttgcgtttttattttattagaggcctattttaaatagagaaccgagcctcctatttcatagggacgg 1092796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 608 - 959
Target Start/End: Complemental strand, 29308564 - 29308216
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    |||||||||||||||| | ||||||||| || | ||||| ||||||| |||||||||||||||||||||| |||||||||||||   ||||||||||| |    
T  29308564 tctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatca 29308465  T
Q  708 nnnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtga-cattccaaatgacacagttaggtaaatttcacatctctttcac 806  Q
              ||||||||||  |||||||||||||||||| || ||| |  |||||  | || ||||||||| |||| |||||||  || ||||||||||    
T  29308464 tttcttt---ttcacataaatcattcgttttcccctttcccacaatggataagtgataaatctaaatgacaccgtta-gtaaattctacctctctttcac 29308369  T
Q  807 ttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact- 905  Q
    ||||||||    ||||| ||||| |||||| ||| |||| ||||||||| |||||||| ||||||| |||||||        ||||||||||| ||| |     
T  29308368 ttaatttttttgtatttcgtttcatgtttagaagctcttatgattctgattttttaataaagcttaactacaca-aaaaaattgcgtttttattttattg 29308270  T
Q  906 cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
     |||||||||||||| | ||| |||||||||||||||||| || ||||||||||    
T  29308269 ggggcctattttaaatagagagccgagcctcctatttcatggggacggccctgc 29308216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 643 - 855
Target Start/End: Original strand, 21946109 - 21946315
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | || ||||||||          ||| ||||||| ||||||||||| |    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaattatttcttt---ttcgcataaacaattcgttttcctc 21946205  T
Q  743 tttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagtt 842  Q
    |||||||| | ||| ||||||||||| ||| ||||| |||||||||||| ||| |||||||||||||| ||||  || ||||||||| | ||||||||||    
T  21946206 tttcctac-acgtaagagtgacattc-aaacgacaccgttaggtaaattccacctctctttcacttaa-tttattttgttttgtttcatatttaaaagtt 21946302  T
Q  843 cttctgattctga 855  Q
     ||||||||||||    
T  21946303 attctgattctga 21946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 613 - 861
Target Start/End: Original strand, 2618327 - 2618570
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnn 712  Q
    ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||         
T  2618327 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatta--ttt 2618424  T
Q  713 nnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaat 811  Q
        |||| ||||||| ||||||||| |||||| | || |   ||||||||| | |||||| ||||| ||| | ||||||||||  ||||||||||||||    
T  2618425 ttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttggataaatttcac--ctctttcacttaat 2618522  T
Q  812 tttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||   ||| ||  |||| ||||||||||||||||| ||||||| |||||    
T  2618523 ttt--tttaattgctttcatgtttaaaagttcttcttattctgatttttt 2618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 590 - 705
Target Start/End: Complemental strand, 12614831 - 12614716
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  12614831 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 12614732  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  12614731 aaagaatcacaacaat 12614716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 593 - 814
Target Start/End: Original strand, 57640 - 57858
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||||| |||| || |||||||| |||| ||||||||| |||   ||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  57640 actctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgtataatcacttaatcagtcaatttagaaagctatttcattcaaa 57739  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatt 791  Q
    | ||||||||||| |         |||| ||||||| ||||||||| |||||| | || ||  ||||||||| | |||||| ||||| ||||| ||||||    
T  57740 gaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatccaaacgacaccgttagataaatt 57837  T
Q  792 tcacatctctttcacttaatttt 814  Q
    ||||  |||||||||||||||||    
T  57838 tcac--ctctttcacttaatttt 57858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 598 - 705
Target Start/End: Original strand, 19231570 - 19231676
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    ||||||||||||||||||||||| || ||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||||||  ||||||||  |||    
T  19231570 agttctactttctggacataaatctggtgctatcaaactaccttcaatttgtat-atcacttaatcaatcaatttgaaaagctatgacattgaaaaaatc 19231668  T
Q  698 acaacaat 705  Q
    ||||||||    
T  19231669 acaacaat 19231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 628157 - 628095
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  628157 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 628095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 600 - 705
Target Start/End: Complemental strand, 14893522 - 14893417
Alignment:
Q  600 ttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcac 699  Q
    |||| |||||| || |||||| |||||||||||||||||  | |||||||||||| |||||||||||||||||||||| ||||||| || |||| |||||    
T  14893522 ttctcctttctagatataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcac 14893423  T
Q  700 aacaat 705  Q
    ||||||    
T  14893422 aacaat 14893417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 6360708 - 6360823
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| ||| | |||||||||||||||||||||||||||||||||||| || ||||||    
T  6360708 ctagactctagttctcttttttgcacataaatcggatcctatcaaaccacccttaatttgtataatcacttaatcagtcaatttgaaaagtta-ttcatt 6360806  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  6360807 gaaagaatcacaacaat 6360823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 31860951 - 31861065
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||||||||||||| || |  |||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  31860951 ctagactttagttcttctatctggacataaatctggta-tatcaaaccaccc-caatttgtataattacttaatcagtcaatttgaaaagctatttcatt 31861048  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  31861049 gaaagaatcacaacaat 31861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 610 - 705
Target Start/End: Complemental strand, 1690728 - 1690633
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||| || | ||||||||| |||| |||||||||||||||||| |||| ||||||||||||  |||||||||||||| |||||||||||    
T  1690728 tggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaatcacaacaat 1690633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 593 - 861
Target Start/End: Complemental strand, 3514962 - 3514698
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||| |||||| |||||||| |||||||| |||||||||    
T  3514962 actctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaa 3514863  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtg-acattccaaatgacacagttaggtaaatt 791  Q
    | ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |   ||||||| | | |||||| |||||  |||| ||||||    
T  3514862 gaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgaaaaatccaaacgacaccattagataaatt 3514765  T
Q  792 tcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||  |||||||||||||||||   ||| ||  |||| ||||||||||||||||||||||||| |||||    
T  3514764 tcac--ctctttcacttaatttt-ttttaattcctttcatgtttaaaagttcttctgattctgatttttt 3514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 775 - 880
Target Start/End: Original strand, 11088701 - 11088807
Alignment:
Q  775 acacagttaggtaaatttcacatctctttcacttaatt-ttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttag 873  Q
    |||| |||||||||||||||| |||||||||||||||| ||   |||||| ||||| |||||| |||||||||| ||||||| |||||||||||| ||||    
T  11088701 acactgttaggtaaatttcacctctctttcacttaattctttttttatttcgtttcatgtttagaagttcttctaattctgattttttaatgaagtttag 11088800  T
Q  874 ctacaca 880  Q
    |||||||    
T  11088801 ctacaca 11088807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 610 - 686
Target Start/End: Original strand, 350383 - 350459
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  350383 tggacataaatatgatgctatcaaaccaccatcaatttatataatcactcaatcagtcaatttcgaaagctatttca 350459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 7525282 - 7525166
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| | || || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| |||| ||||| |||    
T  7525282 ctagactctagttctccattttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatcagtcaatttggaaagttattttatt 7525183  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  7525182 gaaagaatcacaacaat 7525166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 339 - 436
Target Start/End: Original strand, 10074341 - 10074439
Alignment:
Q  339 gttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |||  ||||||| ||||| ||||||| || |||||||||||    
T  10074341 gttgggtcacaaggggagcct-gggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggca 10074439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 29149351 - 29149467
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| ||    ||||||||||||||||||||||||||||||| |||| || ||||||    
T  29149351 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataatcacttaatcagtcaatttggaaagttagttcatt 29149450  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  29149451 gaaagaatcacaacaat 29149467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 6754208 - 6754270
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6754208 aatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaat 6754270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 29401142 - 29401204
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29401142 aattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaat 29401204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 590 - 686
Target Start/End: Original strand, 31234862 - 31234956
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||||| ||||||||||| | ||||  ||||  |||||||||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  31234862 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 7341157 - 7341228
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcactta 660  Q
    |||||||| ||||| ||||||||||||||||||||||| ||| |||| ||| |||||||| |||||||||||    
T  7341157 ctagactctagttccactttctggacataaatttgatgttattaaaccaccgtcaatttgaataatcactta 7341228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 589 - 648
Target Start/End: Original strand, 6294227 - 6294286
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttg 648  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||| | ||||||||||    
T  6294227 ctagactctagttctactttttgggcataaatttgatgctatcaaaccatcatcaatttg 6294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 12071691 - 12071765
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaagg 434  Q
    ||||||| | |||||||||||||||||||||| ||||||  ||||||||||||| ||||||| || |||||||||    
T  12071691 ggggaccgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaagg 12071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 16455066 - 16454989
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || |||||||||||    
T  16455066 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggca 16454989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 3415642 - 3415540
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctaga--acaaccatacaagt--gagagacgccacaatcttacctaacaccttaa 432  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||  ||||||  |||||   ||||||| ||||| ||||||| || |||||||    
T  3415642 ttgttgggtcacaaggggagctt-gggggaccttccacatcgaggctagagaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaa 3415544  T
Q  433 ggca 436  Q
    ||||    
T  3415543 ggca 3415540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 16454756 - 16454657
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||  |||||   ||||||||||||| ||||| | || | ||||||||    
T  16454756 tgttgggtcacgaggggagc-tcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggc 16454658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 590 - 686
Target Start/End: Original strand, 31243999 - 31244092
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||||| ||||||||||| | ||||  ||||  |||||||||||| | |  ||||||||||||||||||||||| |||| ||||||||||||||||    
T  31243999 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatcaatcaa-ttgaaaagctatttca 31244092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 2378285 - 2378210
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||| ||||||||||||||||||||||||  ||||   ||||||| ||||| |||||||||| |||||||||    
T  2378285 gggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaagg 2378210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 12085046 - 12085109
Alignment:
Q  374 catcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||||||||||||| ||||||  ||||||||||||| ||||||| || ||||||||||    
T  12085046 catcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggc 12085109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 649 - 693
Target Start/End: Original strand, 22503751 - 22503795
Alignment:
Q  649 tataatcacttaatcagtcaatttgaaaagctatttcattgaaag 693  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  22503751 tataatcacttaatcagtcaatttgaaaaactatttcgttgaaag 22503795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 770 - 880
Target Start/End: Original strand, 350541 - 350654
Alignment:
Q  770 aaatgacacagttaggtaaatttcac--atctctttcacttaattttaagttattttgtttcgtgtttaaaagttctt-ctgattctgactttttaatga 866  Q
    ||| ||||| || |||||||||||||  || ||||||| ||||||||   |||||| ||||| |||||| |||||||| || ||||| | ||||||||||    
T  350541 aaacgacaccgtcaggtaaatttcacctatatctttcatttaatttttttttatttcgtttcatgtttagaagttctttctaattctaattttttaatga 350640  T
Q  867 agcttagctacaca 880  Q
    || |||||||||||    
T  350641 agtttagctacaca 350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 2578419 - 2578518
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||||||  ||||| || |||||||||| |||||||||||||||||||||||  |||||    |||||| ||||| ||||||| || |||||||||    
T  2578419 ttgttgggtcatgaggggggc-tagggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaagg 2578517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 911 - 948
Target Start/End: Original strand, 22504011 - 22504048
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcatagg 948  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22504011 ctattttaaaaagagaaccgagcctcctatttcatagg 22504048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 362 - 435
Target Start/End: Original strand, 2579872 - 2579947
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || ||||||||||    
T  2579872 ggggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggc 2579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 359 - 436
Target Start/End: Complemental strand, 2843716 - 2843637
Alignment:
Q  359 tagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||| ||||||||||||||||||||||||  ||||   ||||||  ||||| ||||||| || |||||||||||    
T  2843716 tagggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggca 2843637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 10073593 - 10073660
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||| |||||||||| |  ||||| |||||||||| ||||||||||||| || |||||||||    
T  10073593 tgttgggtcacgaggggagcct-gaaggaccgtccacatcgatgctagaacaaccacactagtgagaga 10073660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 14748341 - 14748410
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaa 432  Q
    |||||||| |||||||||||||||||||||||| |||||  |||||  ||||| ||||||| || |||||||    
T  14748341 gggggaccgtccacatcgaggctagaacaaccacacaagcaagaga--ccacactcttacccaaaaccttaa 14748410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 29518662 - 29518587
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||    
T  29518662 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaagg 29518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 29519079 - 29519004
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||    
T  29519079 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaagg 29519004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 636 - 684
Target Start/End: Original strand, 32056055 - 32056103
Alignment:
Q  636 aaccatcaatttgtataatcacttaatcagtcaatttgaaaagctattt 684  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||||||||    
T  32056055 aaccatccaattgtataatcacttaatcactcaatttaaaaagctattt 32056103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 32741338 - 32741263
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||    
T  32741338 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaagg 32741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 434
Target Start/End: Complemental strand, 1127518 - 1127444
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||| ||||||||||| |||| |||||| | ||||  ||||||||||||| ||||||| || |||||||||    
T  1127518 ggggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaagg 1127444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 5832007 - 5832071
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||  ||||||||||  ||||||| || ||||||||||||||||||||| |||||| |||||    
T  5832007 ttgggtcatgaggggagcct--ggggaccgtctacatcgaggctagaacaaccacacaagtaagaga 5832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 907 - 958
Target Start/End: Original strand, 11088832 - 11088883
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||||||||| |||   |||||||||||||||||| ||||||||||    
T  11088832 gggcctattttaaaaagagagttgagcctcctatttcatagaaacggccctg 11088883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 907 - 958
Target Start/End: Original strand, 31861250 - 31861301
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||||||| | |||  |||||||||||||||||||| |||||||||    
T  31861250 gggcctattttaaatagagagtcgagcctcctatttcatagggacggccctg 31861301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 3058396 - 3058308
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| | |||||||  |||||||||||| |||||| ||| ||||||   ||||||| ||||| ||||||| || |||||||||||    
T  3058396 aggggagctttgggggacggtccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaaggca 3058308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 392
Target Start/End: Complemental strand, 3409821 - 3409788
Alignment:
Q  359 tagggggaccatccacatcgaggctagaacaacc 392  Q
    |||||||||| |||||||||||||||||||||||    
T  3409821 tagggggaccgtccacatcgaggctagaacaacc 3409788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 781 - 814
Target Start/End: Original strand, 19231750 - 19231783
Alignment:
Q  781 ttaggtaaatttcacatctctttcacttaatttt 814  Q
    ||||||||||||||| ||||||||||||||||||    
T  19231750 ttaggtaaatttcacctctctttcacttaatttt 19231783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 589 - 957
Target Start/End: Original strand, 39081346 - 39081708
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39081346 ctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 39081445  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| || ||||||||||          |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  39081446 gaaagaattacaacaattatttctt----ttcatataaaccattagttttcccctttcctacgacgtaggagtgacattccaaatgacaca-ttaggtaa 39081540  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| |||||||||||||||||||  || ||||||||| | ||||||||||||| ||||||||| ||| |||||||||||| |||||||            
T  39081541 atttcacctctctttcacttaattttattttgttttgtttcatatttaaaagttcttatgattctgattttataatgaagcttaactacaca-aaaaaat 39081639  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    |  |||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  39081640 tatgtttttattttactgggacctattttaaaaatagaaccgaacctcctatttcataggaacggccct 39081708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 589 - 959
Target Start/End: Original strand, 13997262 - 13997628
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||  |||||||||||||||||||||||||||  ||| ||| |||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  13997262 ctagactctagtttcactttctggacataaatttgatgctattgaaccaccgtcaatttgaataatcacttaatgagtcaatttgaaaaactatttcatt 13997361  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||| |||||||||||| |||||||||| ||| |||||||||||||||  ||||| ||||||||    
T  13997362 gaaagaatcacaacaattatttcttt---ttcgcataaaccattcgttttccc-tttcctacgacgtatgagtgacattccaaacaacacatttaggtaa 13997457  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||||||||||||||||||| ||   ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||            
T  13997458 atttcacatctctttcacttaatcttgttttattttgttttgtgtttaaaagttcttctgattctgattttttaatgaagcttagctacacaaaaagaat 13997557  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    |||||||| || |||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13997558 tgcgttttgattttactgtggcctattttaaaaatagaaccgagcctcctatttcataggaacggtcctgc 13997628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 589 - 952
Target Start/End: Original strand, 1418858 - 1419217
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1418858 ctagactctagttctactttttagacataa-tttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgtaaagctatttcatt 1418956  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| |||||||||||| ||||  ||||||||| || ||| ||||||||||||||||||||| |||||||||    
T  1418957 gaaagaatcacaacaattatttcttt---ttcgcataaactattcattttttcctttcctatgacgtatgagtgacattccaaatgacaccgttaggtaa 1419053  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| |||||||||||||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||||||  ||| |||||||            
T  1419054 atttcacttctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattttgactttttaatgaaatttaactacacataaaaaaa 1419153  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacg 952  Q
    |   ||||| | |||||||  |||||||||||||||||||||| |||||||||| || ||||||    
T  1419154 tatatttttgttttactcgaacctattttaaaaatagaaccgaacctcctattttattggaacg 1419217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 598 - 958
Target Start/End: Complemental strand, 29480744 - 29480386
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||| ||||||||||||||||  |||||||||||||| |||    
T  29480744 agttcaactttctggacataaatttgatgctattaaaccaccatcaatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatc 29480645  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacat 797  Q
    ||||||||||          ||| ||||||| ||| || |||||||||| |||||  |||||||||||||||||| ||||| |||||||||| ||||| |    
T  29480644 acaacaattatttcttt---ttcgcataaaccatttgtcttcccctttcttacgacataggagtgacattccaaacgacaccgttaggtaaagttcacct 29480548  T
Q  798 ctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga-ctttttaatgaagcttagctacacacnnnnnnntgcgtttt 896  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||  |||||||||||| |||| ||||||        ||| ||||    
T  29480547 ctctttcacttaattttattttgttttgtttcgtatttaaaagttcttctgattctgatttttttaatgaagattaggtacacaaaaagaattgcatttt 29480448  T
Q  897 tatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
     || ||||  ||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  29480447 gattttacgggggcctattttaaaaatagaaccaagcctcatatttcataggaacgggcctg 29480386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 589 - 955
Target Start/End: Complemental strand, 36060021 - 36059658
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  36060021 ctagactctagttctactttttagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcatt 36059922  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| | ||||||||| |          ||  ||||||| |||||||||||| ||||| |||| ||| ||||||||||||||| ||| | |||| ||||    
T  36059921 gaaagaaccacaacaatcatttcttt---tttgcataaaccattcgttttcccttttcccacgacgtatgagtgacattccaaacgacgccgttacgtaa 36059825  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |||| || |||||||||||||||||||  |||||||||||| |||||| |||||||| ||| ||||| |||||||||||| ||||||||| |            
T  36059824 attttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgattttttaatgaagtttagctacaaaaaaaaaat 36059725  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggcc 955  Q
    ||||||||||| ||||| |  ||||||||||||| |||  ||||||||||||||||||| |||||||    
T  36059724 tgcgtttttattttactggtacctattttaaaaaaagagtcgagcctcctatttcatagcaacggcc 36059658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 593 - 835
Target Start/End: Original strand, 38599354 - 38599592
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| ||||||| ||| |||| ||||||||||||||||||||  |  ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38599354 actcaagttctattttatggatataaatttgatgctatcaaatcattatcaatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaa 38599453  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaattt 792  Q
    | |||| ||||||||          ||  ||||||| |||||||||||||||||| |||| ||| ||||| |||| |||| ||||| |||||||||||||    
T  38599454 gaatcaaaacaattatttatt----ttttcataaaccattcgttttcccctttcccacgacgtatgagtggcatttcaaacgacaccgttaggtaaattt 38599549  T
Q  793 cacatctctttcacttaattttaagttattttgtttcgtgttt 835  Q
    ||  |||||||||||||||||||  ||||||| |||| |||||    
T  38599550 catctctctttcacttaattttattttattttatttcatgttt 38599592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 659 - 959
Target Start/End: Complemental strand, 17117691 - 17117394
Alignment:
Q  659 taatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtagg 758  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |          |||| |||||| |||||||||||||||||| || | | |      
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttcttt---ttcatataaaccattcgttttcccctttcccacaacggata 17117595  T
Q  759 agtgacat-tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgact 857  Q
    |||||||  |||||| ||||| ||||| ||||||  || ||||||||||||||||||    ||||| ||||| |||||| ||| |||||||||||||| |    
T  17117594 agtgacaaatccaaacgacaccgttag-taaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctgatt 17117496  T
Q  858 ttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccc 956  Q
    ||||||| |||||||||||||||        ||| ||||||| ||| |  |||||||||||||| | ||| ||||||||||||||||||||| |||||||    
T  17117495 ttttaataaagcttagctacaca-aaaaaattgcatttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacggccc 17117397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 608 - 956
Target Start/End: Complemental strand, 38985806 - 38985461
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    |||||||||||||||| | ||||||||| |||  ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  38985806 tctggacataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatca 38985707  T
Q  708 nnnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcac 806  Q
              ||||||||||  ||| |||||||||||| | || | | |  |||||| | |||||| ||| | |||| || ||||  |||||||||||||    
T  38985706 tttcttt---ttcacataaaacatttgttttccccttttccacaacggataagtgacaaatccaaaagacgccgtta-gtgaattctacatctctttcac 38985611  T
Q  807 ttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact- 905  Q
    ||||||||    ||||| ||||| | |||| ||  |||||||||||||| |||||||| ||||||| ||||||||       | ||||||||| ||| |     
T  38985610 ttaatttttttgtatttcgtttcatttttagaaactcttctgattctgattttttaataaagcttaactacacacaaaaaattacgtttttattttattg 38985511  T
Q  906 cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccc 956  Q
     |||||||||||||| | ||| |||||||| |||||||||||| |||||||    
T  38985510 ggggcctattttaaatagagagccgagcct-ctatttcatagggacggccc 38985461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 598 - 962
Target Start/End: Complemental strand, 26151854 - 26151493
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  26151854 agttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatc 26151755  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcaca 796  Q
    |||||||| |         |||| ||||||| ||||||||| |||||| |||| |   ||||||||| | |||||| ||||| ||||| ||||||||||     
T  26151754 acaacaatca--tttttttcttcgcataaaccattcgttttacccttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac- 26151658  T
Q  797 tctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga--ctttttaatgaagcttagctacacacnnnnnnntgcgtt 894  Q
     |||||||||||||||||   ||| ||  |||| |||||| || |||||||||||||||   |||||||||||  |||||||||||        | || |    
T  26151657 -ctctttcacttaatttt-ttttaattactttcatgtttagaacttcttctgattctgattttttttaatgaaatttagctacaca-aaaaaattacg-t 26151562  T
Q  895 tttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcctt 962  Q
    ||||| |||||  |||||||||||||||| ||| || ||||||||||||||  || |||||||||||||    
T  26151561 tttattttactaggggcctattttaaaaagagagccaagcctcctatttcacggggacggccctgcctt 26151493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 19367535 - 19367419
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  19367535 ctagactctagttctcctttttgtacataaatcggattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 19367436  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  19367435 gaaagaatcacaacaat 19367419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 611 - 954
Target Start/End: Original strand, 15457470 - 15457812
Alignment:
Q  611 ggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannn 710  Q
    |||||||||| || | ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |       
T  15457470 ggacataaatctggtactatcaaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaataattt 15457569  T
Q  711 nnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcactta 809  Q
           |||||| |||| |||||||||||||||||| || | | |  |||||| | |||||| ||| | |||| |||||||  |  |||||||||||||    
T  15457570 ttttt--ttcacacaaaccattcgttttcccctttcccacaacggacaagtgacaaatccaaacgacgctgtta-gtaaattctatctctctttcactta 15457666  T
Q  810 attttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttact-cgg 908  Q
    |||||    | ||| ||||| |||| | ||| |||||| ||| ||| |||||||| |||||||||||||||        || |||||||| ||| |   |    
T  15457667 atttttttgtttttcgtttcatgttcagaagctcttcttattttgattttttaataaagcttagctacacaaaaagaattgtgtttttattttattgaag 15457766  T
Q  909 gcctattttaaaaatagaaccgagcctcctatttcataggaacggc 954  Q
     ||||||||||| | ||| ||||||||||||||||||||| |||||    
T  15457767 acctattttaaatagagagccgagcctcctatttcatagggacggc 15457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 589 - 861
Target Start/End: Original strand, 7993580 - 7993848
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||||   ||| ||||||||| |||   ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  7993580 ctagactctagttctcctttttgtacataaaccggatcctatcaaaccacccctaatttgtataatcacttaatcagccaatttggaaagctatttcatt 7993679  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| |||||||||| |          |||| ||||||| ||||||||| |||||| | || ||  ||||||||| | |||||| ||||| ||||| ||    
T  7993680 gaaagaatcacaacaa-tctttttttttcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatccaaacgacaccgttagata 7993778  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||||||||  ||||||||||| ||||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  7993779 aatttcaca--tctttcacttattttt--tttaattcctttcatgtttagaagttcttctgattctgatttttt 7993848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 767 - 958
Target Start/End: Complemental strand, 1226208 - 1226017
Alignment:
Q  767 tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga-ctttttaatg 865  Q
    |||||| ||||  |||||||||||||||  ||||||||||||||||||   |||||| ||||| |||||| |||||||||| |||||||  |||||||||    
T  1226208 tccaaacgacatcgttaggtaaatttcatctctctttcacttaatttttttttatttcgtttcatgtttagaagttcttctaattctgatttttttaatg 1226109  T
Q  866 aagcttagctacacacnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    ||| |||||||||||        |  |||||||| |||   |||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  1226108 aagtttagctacacaaaaaaaattatgtttttatttta-aggggcctattttaaaaagagagtcgagcctcctatttcataggaacggccctg 1226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 610 - 957
Target Start/End: Complemental strand, 18173035 - 18172694
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattann 709  Q
    ||||||||||| || | ||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| |      
T  18173035 tggacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatcatt 18172936  T
Q  710 nnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcactt 808  Q
            ||||||||||| |||||||||||||||||| || | | |  |||||| | |||||| ||| | ||| ||||||||  || ||||||||||      
T  18172935 tcttt---ttcacataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaacgacgccgtt-ggtaaattctacctctctttcac-- 18172842  T
Q  809 aattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgg 908  Q
    ||||||    ||||| ||||| |||||| ||  |||||||||||||| |||||||| |||||| ||||||||        ||||||||||| ||| | ||    
T  18172841 aatttttttgtatttcgtttcatgtttagaaactcttctgattctgattttttaataaagcttggctacaca-aaaaaattgcgtttttattttattggg 18172743  T
Q  909 g-cctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    | ||||||||||| | ||| |||| ||| |||||||||||| ||||||||    
T  18172742 gacctattttaaatagagagccgaacct-ctatttcatagggacggccct 18172694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 6530607 - 6530723
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||||||||||||||| |||||||||    
T  6530607 ctagactctagttctcatttttgtacataaatcggatactatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcatt 6530706  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  6530707 gaaagaatcacaacaat 6530723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 18676427 - 18676311
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||| |||||||||||||||||| ||||||||||||||    
T  18676427 ctagactctagttctcctttttgtacataaatcggatcctatcaaactacccctaatttgtataataacttaatcagtcaatttggaaagctatttcatt 18676328  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  18676327 gaaagaatcacaacaat 18676311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 27302644 - 27302528
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | |||| || |||||||| ||||| ||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27302644 ctagactctaattcttctgtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcatt 27302545  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  27302544 aaaagaatcacaacaat 27302528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 590 - 705
Target Start/End: Original strand, 2063754 - 2063869
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||| | |||| || |||||||| | || ||||||||| |||   ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2063754 tagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattg 2063853  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  2063854 aaagaatcacaacaat 2063869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 589 - 861
Target Start/End: Complemental strand, 42411674 - 42411406
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||| |||||||||| ||||||||||||||    
T  42411674 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatt 42411575  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtg-acattccaaatgacacagttaggta 787  Q
     |||| ||||||||||| |         |||| ||||||| ||||||||| ||||||   || |   ||||||| | | |||||| ||||| ||||| ||    
T  42411574 taaagaatcacaacaatca--ttttttacttcgcataaaccattcgttttaccctttttcacaacagaggagtgaaaaatccaaacgacaccgttagata 42411477  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||| ||  ||||||||||||||| |   ||| ||| |||| ||||||||||||||||||||||||| |||||    
T  42411476 aatttaac--ctctttcacttaattat-ttttaatttctttcatgtttaaaagttcttctgattctgatttttt 42411406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 593 - 872
Target Start/End: Complemental strand, 31273277 - 31273002
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    ||||||| ||| |||||||||| ||||||||||| |||||||| |||  ||||||||||||||| |||||||||||||||| ||  |||||||||| |||    
T  31273277 actccagctctcctttctggacttaaatttgatgttatcaaaccaccc-caatttgtataatcatttaatcagtcaatttggaatactatttcattaaaa 31273179  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatt 791  Q
    | |||| |||| | |          ||| ||||||| ||| ||||| | |||||| || |   |  |||||| | |||||| ||||||||||||||||||    
T  31273178 gaatcataacattcatttcttt---ttcgcataaaccatttgtttttctctttcccacaacagaaaagtgacaaatccaaacgacacagttaggtaaatt 31273082  T
Q  792 tcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagctta 872  Q
    |||| |||||||| |||||||||   ||| || ||||  | |||| |||||||||||||| ||| ||||||||||||||||    
T  31273081 tcacttctctttcgcttaatttt-tcttaattcgtttaatttttagaagttcttctgattttgattttttaatgaagctta 31273002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 13020371 - 13020487
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13020371 ctagactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatt 13020470  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  13020471 taaagaatcacaacaat 13020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 41096654 - 41096538
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||  |||   ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  41096654 ctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcatt 41096555  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  41096554 gaaagaatcacaacaat 41096538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 18916151 - 18916054
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||| || | ||||||||| | |  ||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  18916151 tctggacataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaat 18916054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 45042337 - 45042456
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatt---tgaaaagctatttc 685  Q
    |||||||| |||||| ||||  | ||||||||||||| ||||||||| |||   |||||||||||||||||||||||||||||   |||||  |||||||    
T  45042337 ctagactctagttcttcttttcgtacataaatttgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggtgaaagtctatttc 45042436  T
Q  686 attgaaaggatcacaacaat 705  Q
    |||||||| |||||||||||    
T  45042437 attgaaagaatcacaacaat 45042456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 598 - 861
Target Start/End: Original strand, 45618934 - 45619192
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||||||||||  |||||||||||||||||| |||    
T  45618934 agttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttg-gaagctatttcattgaaagaatc 45619032  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcaca 796  Q
    |||||||| |         |||| ||||||| ||| ||||| |||||| | || |   ||||||||| | |||||| ||||| ||||| ||||||||||     
T  45619033 acaacaatca--tttttttcttcgcataaaccatttgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac- 45619129  T
Q  797 tctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
     |||||||||||||||||   ||| ||  |||| |||||| || ||||||||||||||| |||||    
T  45619130 -ctctttcacttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgatttttt 45619192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 613 - 705
Target Start/End: Original strand, 4855965 - 4856057
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  4855965 acataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaat 4856057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 21747346 - 21747230
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||| |||||||| || | ||||||||| |||  ||||||||||||||||||||||||||||||| |||  |||| |||||    
T  21747346 ctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcatt 21747247  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  21747246 gaaagaatcacaacaat 21747230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 598 - 705
Target Start/End: Complemental strand, 34061963 - 34061856
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| || |||||||| || | ||||||||| |||   ||||||||| || |||||||||||||||||| ||||||||||||||||||| |||    
T  34061963 agttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatgattacttaatcagtcaatttggaaagctatttcattgaaagaatc 34061864  T
Q  698 acaacaat 705  Q
    ||||||||    
T  34061863 acaacaat 34061856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 601 - 705
Target Start/End: Complemental strand, 18482611 - 18482506
Alignment:
Q  601 tctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttga-aaagctatttcattgaaaggatcac 699  Q
    |||| ||| |||||||||||||||||||| ||||| |||  |||||||||||||| |||||||||||||||| | | || |||||||||||||| || ||    
T  18482611 tctagtttatggacataaatttgatgctaacaaactacccccaatttgtataatcgcttaatcagtcaatttaacacagttatttcattgaaagaataac 18482512  T
Q  700 aacaat 705  Q
    ||||||    
T  18482511 aacaat 18482506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 37106105 - 37106006
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||   ||||||| ||||| ||||||| || | ||||||||    
T  37106105 tgttgggtcacaaggggagc-tcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggc 37106007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 610 - 705
Target Start/End: Complemental strand, 1226362 - 1226266
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttc-attgaaaggatcacaacaat 705  Q
    ||||||||||| |||||||| ||||| ||| ||||||| |||||||||| |||||| |||||||||||| |||||| ||  |||| |||||||||||    
T  1226362 tggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatttcaataaaaagaatcacaacaat 1226266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 42514830 - 42514732
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||  ||||||  ||||||||||||| ||||||| || | ||||||||    
T  42514830 tgttgggtcacgaggggagc-tcgggggaccgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggc 42514732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 25222325 - 25222387
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||||||||||||| |||||||||  |||| |||||||||||||| |||||||||||    
T  25222325 aatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaat 25222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 722 - 804
Target Start/End: Original strand, 38599593 - 38599675
Alignment:
Q  722 cataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttc 804  Q
    ||||||| |||||||||||||||||| |||| ||| ||||| |||| |||| ||||| |||||||||||||||  ||||||||    
T  38599593 cataaaccattcgttttcccctttcccacgacgtatgagtggcatttcaaacgacaccgttaggtaaatttcatctctctttc 38599675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 339 - 436
Target Start/End: Complemental strand, 6421911 - 6421813
Alignment:
Q  339 gttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||  |||||||| | |||||||| ||||||||||||| |||||||||| ||||||  ||||||| ||||| ||||||| || |||||||||||    
T  6421911 gttgggtcatgaggggagc-tcgggggaccgtccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggca 6421813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 589 - 644
Target Start/End: Complemental strand, 32186266 - 32186211
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaa 644  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||    
T  32186266 ctagactctagttctactttttagacataaatttgatgctatcaaaccaccatcaa 32186211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 6422270 - 6422193
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||  |||||||||||||||||||||||| |||||   ||||||| ||||| |||||||||| ||||||||||    
T  6422270 agggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggc 6422193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 41283474 - 41283551
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||| ||||||||||||||| ||||    ||||||||||||| |||||||||| |||||||||||    
T  41283474 gggggaccgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaaggca 41283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 3673250 - 3673182
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||| |||||    
T  3673250 ttgttgggtcactgggggagcc-agggggaccgtccacatcgaggctagaacaaccacactagtaagaga 3673182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 705
Target Start/End: Original strand, 12269374 - 12269488
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| ||||||  ||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||  ||||| ||||||||||||||     
T  12269374 tagactctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagt-gatttggaaagctatttcatta 12269472  T
Q  690 aaaggatcacaacaat 705  Q
    |||  ||||| |||||    
T  12269473 aaaaaatcaccacaat 12269488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 705
Target Start/End: Complemental strand, 42759802 - 42759756
Alignment:
Q  659 taatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||    
T  42759802 taatcagtcaatttggaaagttatttcattgaaagaatcacaacaat 42759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 6421566 - 6421467
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| |||||||| | |||||||| ||||||||||| |||||||||||  |||||   ||||||| ||||| ||||||| || |||| |||||    
T  6421566 tgttgggtcacgaggggagc-tcgggggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggc 6421468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 880
Target Start/End: Original strand, 12269551 - 12269663
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgact---ttttaatg 865  Q
    |||| ||||| ||||| ||||||||||  |||||||||||||||||   ||| ||  |||| |||||| |||||||||||||||||| |   ||||||||    
T  12269551 caaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaagttcttctgattctgattttcttttaatg 12269648  T
Q  866 aagcttagctacaca 880  Q
    ||  |||||||||||    
T  12269649 aaatttagctacaca 12269663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 675 - 861
Target Start/End: Original strand, 36481428 - 36481611
Alignment:
Q  675 aaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacat-tccaaat 773  Q
    ||||||||||||||||||| ||||||||||| |         |||| ||||||| |||| |||| |||||| | || |   ||||||||||  ||||||     
T  36481428 aaagctatttcattgaaagaatcacaacaatcattttttt--cttcgcataaaccattcattttacccttttccacaacagaggagtgacaaatccaaac 36481525  T
Q  774 gacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||| | ||| ||||||||||  |||||||||||||||||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  36481526 gacaccggtagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttagaagttcttctgattctgatttttt 36481611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 958
Target Start/End: Original strand, 2063932 - 2064119
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt-aatgaa 867  Q
    |||| ||||| ||||| ||||||||||  |||||||||||||||||   ||| ||  || | | |||| ||| |||||||||||||| ||||| ||||||    
T  2063932 caaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattccttccatatttagaaggtcttctgattctgatttttttaatgaa 2064029  T
Q  868 gcttagctacacacnnnnnnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    | |||||||||||        | |||||| || ||||| ||| ||||||||||||| |||   ||||||||||||||| |||||||||||||    
T  2064030 gtttagctacaca-aagatattacgtttt-attttactacggacctattttaaaaagagagttgagcctcctatttcacaggaacggccctg 2064119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 911 - 958
Target Start/End: Complemental strand, 41096336 - 41096289
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  41096336 ctattttaaaaagagagccgagcctcctatttcacagggacggccctg 41096289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 12349207 - 12349154
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaac 391  Q
    ||||||||||||||||||||||| | |||||  |||| |||||||||||||||||    
T  12349207 ttgttgggtcacaaggggagcct-gagggactgtccatatcgaggctagaacaac 12349154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 910 - 956
Target Start/End: Complemental strand, 21747029 - 21746983
Alignment:
Q  910 cctattttaaaaatagaaccgagcctcctatttcataggaacggccc 956  Q
    ||||||||||| | ||| ||||||||||||||||||||| |||||||    
T  21747029 cctattttaaatagagagccgagcctcctatttcatagggacggccc 21746983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 36178604 - 36178681
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||| | ||||||| |||||||||||||||| |||||   ||||||| ||||| ||||||| || |||||||||||    
T  36178604 gggggatcgtccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 36178681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 339 - 436
Target Start/End: Complemental strand, 3672882 - 3672783
Alignment:
Q  339 gttgggtcacaagggg-agcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||| ||||| |||| ||||| ||| ||||||||||| |||||||||||| |||| |  ||||||| ||||| ||||||| || | ||||||||    
T  3672882 gttgggtcactagggggagcc-aggggaaccgtccacatcgagactagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaaggc 3672784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 641 - 686
Target Start/End: Original strand, 12072498 - 12072543
Alignment:
Q  641 tcaatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||||| |||||||||||||||| ||||||| ||||| |||||||    
T  12072498 tcaatttatataatcacttaatcaatcaatttaaaaagttatttca 12072543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 613 - 654
Target Start/End: Original strand, 13001617 - 13001658
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataat 654  Q
    ||||||||||||||||||||||| |||  |||||||||||||    
T  13001617 acataaatttgatgctatcaaaccacccccaatttgtataat 13001658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 15880413 - 15880345
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||||||| |||||||  |||||   ||||||||||||| ||||||| || |||||||||||    
T  15880413 tccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggca 15880345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 36005888 - 36005956
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||||||||||||  |||||   ||||||||||||| | ||||| || |||||||||||    
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggca 36005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 435
Target Start/End: Original strand, 40679632 - 40679704
Alignment:
Q  365 gaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||| ||||||||||| |||||||||||  ||||||  ||||||||||||| ||||||| || | ||||||||    
T  40679632 gaccgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggc 40679704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 40733688 - 40733631
Alignment:
Q  349 aaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    |||||||| | ||||||||||||||||||||| || |||| |||| ||||| ||||||    
T  40733688 aaggggagtcaagggggaccatccacatcgagacttgaactaccacacaagcgagaga 40733631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 40734053 - 40733965
Alignment:
Q  349 aaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgag--agacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||| ||||| |||  |||| ||||| ||||||| || || |||||||    
T  40734053 aaggggagtcaagggggaccgtccacatcgagacttgaacaaccacacaagcgagacagacaccacactcttacccaaaactttaaggc 40733965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 589 - 959
Target Start/End: Original strand, 42740058 - 42740420
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  42740058 ctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactatttcatt 42740157  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| ||| |||||||||          ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  42740158 gaaagaatcgcaacaattatttcttt---ttcgcataaacaattcgttttcccctttcctacgacgtaggagtgacattccaaatgaaactgttaggtaa 42740254  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |  |||| | |||||||||||||||||  || ||||||||| ||||||||||||||||   |||||| |||||||||||| ||| | |||||            
T  42740255 a--tcacctatctttcacttaattttattttgttttgtttcatgtttaaaagttcttc---ttctgattttttaatgaagtttaaccacacaaaaaaaat 42740349  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    | ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42740350 tacgtttttattttactggggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 42740420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 593 - 958
Target Start/End: Complemental strand, 26486477 - 26486125
Alignment:
Q  593 actccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaa 692  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||        |||||||||||||||||||||    
T  26486477 actctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatcacttaatc--------tgaaaagctatttcattgaaa 26486386  T
Q  693 ggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaattt 792  Q
      |||| ||||||||          ||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||| |||||||||    
T  26486385 aaatcataacaattatttcttt---ttcgcataaactattcgttttcctctttcctacgacgtagaagtgacattccaaatgacaccgtttggtaaattt 26486289  T
Q  793 cacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcg 892  Q
    |||  |||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||       |||     
T  26486288 cac--ctctttcaattaattttattttattttgtttcatgtttaaaagttcttctgattctgatttttaaatgaagcttagctacacacaaaaaaatgca 26486191  T
Q  893 tttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26486190 tttttattttactcgggcctattttgaaaatagaaccgagcctcctattttataggaacggccctg 26486125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 589 - 960
Target Start/End: Complemental strand, 37873878 - 37873504
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| || |||||||    
T  37873878 ctagactctagttctactttctagacataaatttgatgctatcaaaccaccatcaatttgtatagtcacttaatcagttaatttgaaaaactgtttcatt 37873779  T
Q  689 gaaaggatcacaacaattannnnnnnnncttc-acataaactattcgttttcccctttcctacgat-----gtaggagtgacattccaaatgacacagtt 782  Q
    ||||| |||||||||||||          |||  ||||||| ||||||||||||||||||||||||     ||||||||||||| ||||| ||||| |||    
T  37873778 gaaagaatcacaacaattatttctt----ttctgcataaaccattcgttttcccctttcctacgatacgacgtaggagtgacatgccaaacgacactgtt 37873683  T
Q  783 aggtaaatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacac 881  Q
    | ||||||||||| |||||||||||||| |||||  ||| |||||||| ||||||||||||||| ||||||| | |||||||||||||||| ||||||||    
T  37873682 acgtaaatttcacctctctttcacttaatttttattttagtttgtttcatgtttaaaagttcttatgattctaattttttaatgaagcttaactacacac 37873583  T
Q  882 nnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcc 960  Q
           | | ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  37873582 aaaaaattacatttttattttactggggcctattttaaaaatagaatcgagcctcctatttcatagaaacggccctgcc 37873504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 589 - 958
Target Start/End: Complemental strand, 17674470 - 17674104
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||  ||||||| || |||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  17674470 ctagactctagtttcactttctagatataaatttgatgctattaaaccaccatcaatttgaataatcacttaatcagtcaatttgaaaaactatttcatt 17674371  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  17674370 gaaagaatcacaacaattatttcttt---ttcgcataaaccatttgttttcccctttcctacgacgtaagagtgacattccaaatgacaccgttaggtaa 17674274  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| | | |||||||||||||||  || ||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||            
T  17674273 atttcacctatttttcacttaattttattttgttttgtttcgtgtttaaaagttcttctgaatatgactttttaatgaagtttaactacacaaaaagaat 17674174  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    || ||||| || ||||| | ||||||||||||||||||  ||| |||| ||||||||||||||| |||||    
T  17674173 tgtgttttgattttactggagcctattttaaaaatagagtcgaacctcttatttcataggaacgaccctg 17674104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 589 - 951
Target Start/End: Complemental strand, 22386953 - 22386593
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||| ||| |||||||||||||||||||||||  ||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  22386953 ctagactctagttccactgtctggacataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatcagtcaatttgaaaaactatttcatt 22386854  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||  ||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||  ||||  |||    
T  22386853 gaaagaatcacaacaattaatattttt--tttgcataaaccatttgttttcccctttcctacgacgtaggagtgacattccaaacgacatcgttaaataa 22386756  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||  |||| ||||||||| ||||||||||| |||| ||||| |            
T  22386755 atttcacatctctttcacttaattttattttattttgtttcgtgtttaaaaaatcttatgattctgattttttaatgaaacttaactacaaaaaaaaaat 22386656  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaac 951  Q
    ||| |||| || |||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  22386655 tgcattttgattttactgcggcctattttaaaaataaaaccgagcctcctatttcataggaac 22386593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 589 - 958
Target Start/End: Complemental strand, 44836837 - 44836476
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  44836837 ctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcact 44836738  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||| || ||           ||| ||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||| | |||||||    
T  44836737 gaaagaatcacatcatttcttt-------ttcgcataaaccattcgtttttccctttcccacgacgtaggagtgacattccaaatgacaccgctaggtaa 44836645  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||| | |||||||| || ||||||||||||            
T  44836644 atttcacatctctttcacttaattttattttattttgtttcatgtttaaaagttcttatgattctaattttttaat-aaacttagctacacagaaaaaat 44836546  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    ||||||||||| |||||  ||  ||||||||||| |||  ||| |||||||||| |||||||||| ||||    
T  44836545 tgcgtttttattttacttaggtttattttaaaaagagagtcgaacctcctattttataggaacggtcctg 44836476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 589 - 959
Target Start/End: Original strand, 24556754 - 24557117
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | ||| |||||||  ||||||||||| |||||| |||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  24556754 ctagactctaattccactttctcaacataaatttggtgctattaaaccaccatcaatttgaataatcacttaataagtcaatttgaaaaactatttcatt 24556853  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
     |||| |||||||||||||          ||| ||||||| ||||||||| |  |||||||  | ||||||||||||||||||| ||||| |||||||||    
T  24556854 taaagaatcacaacaattatttcttt---ttcgcataaaccattcgtttttctttttcctatcacgtaggagtgacattccaaacgacaccgttaggtaa 24556950  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    |||||||  ||||||||||||||||||  || |||||||  |||||||||||||||||||||||| | |||| |||||||||||||||||||            
T  24556951 atttcac--ctctttcacttaattttattttgttttgtt--gtgtttaaaagttcttctgattctaatttttcaatgaagcttagctacacaaaaagaat 24557046  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    |||||||| || ||||| || |||||||||||||||||| ||||| || |||||||||  |||| ||||||    
T  24557047 tgcgttttgattttactaggacctattttaaaaatagaatcgagcatcatatttcatataaacgaccctgc 24557117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 632 - 866
Target Start/End: Complemental strand, 13120939 - 13120708
Alignment:
Q  632 aaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactat 731  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||          ||| ||||||| ||    
T  13120939 aaaccaccattaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttcttt---ttcgcataaaccat 13120843  T
Q  732 tcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgt 831  Q
    || |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||  || |||||||||||    
T  13120842 tcattttcccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaaatttcacctctctatcacttaattttattttgttttgtttcgt 13120743  T
Q  832 gtttaaaagttcttctgattctgactttttaatga 866  Q
    |||||||||||||||||||||||| ||||||||||    
T  13120742 gtttaaaagttcttctgattctgattttttaatga 13120708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 589 - 880
Target Start/End: Original strand, 50371082 - 50371370
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| ||||||||| ||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  50371082 ctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcatt 50371181  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          ||| ||||||  ||| ||||| ||||| || || | | ||||||||| | ||||||  |||  ||||||||    
T  50371182 gaaagaatcacaacaatcatttcttt---ttcgcataaatcattagtttttcccttacccacaacggaggagtgacaaatccaaacaacatcgttaggta 50371278  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    |||||||| ||||||||||||||||||   |||||| ||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  50371279 aatttcacctctctttcacttaatttt-ttttatttcgtttcatgtttagaagttcttatgattctgattttttaatgaagcttagctacaca 50371370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 589 - 881
Target Start/End: Complemental strand, 27703645 - 27703361
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||     
T  27703645 ctagactctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatc 27703546  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| ||||||||||| |          ||| ||||||| ||||||||| |||||| | || | | | |||||||| |||||| ||||| |||||||||    
T  27703545 gaaagaatcacaacaatcatttcatt---ttcgcataaaccattcgtttttcccttttccaccacggaagagtgacaatccaaacgacactgttaggtaa 27703449  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacac 881  Q
    ||||||| |||| |||||||||||     |||||| ||||| |||||| ||||| || ||||||||| |||||||  ||||||| ||||||||    
T  27703448 atttcacctctccttcacttaatt-----ttatttcgtttcatgtttagaagttattatgattctgattttttaacaaagcttaactacacac 27703361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 589 - 814
Target Start/End: Original strand, 10109668 - 10109890
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||| ||| ||||||||| ||||  ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  10109668 ctagactctagttctcctttttgtacataaattggatcctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagcaatttcatt 10109767  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||||||||||||| |||||| | || |   ||||||||| | |||||| ||| | ||||| ||    
T  10109768 gaaagaatcacaacaatca--tttttttcttcgcataaactattcgttttacccttttccacaacagaggagtgacaaatccaaacgacgccgttagata 10109865  T
Q  788 aatttcacatctctttcacttaatttt 814  Q
    ||||||||  |||||||||||||||||    
T  10109866 aatttcac--ctctttcacttaatttt 10109890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 606 - 874
Target Start/End: Original strand, 5560448 - 5560713
Alignment:
Q  606 tttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||| || ||||| ||||| |||  ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  5560448 tttctggacataaatctggtgctaccaaaccacccccaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaat 5560547  T
Q  706 tannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttc 804  Q
     |         |  | |||||||||||| ||||| | ||||| || | | ||||||||| | ||||||| |||| | || ||||||||  ||||||||||    
T  5560548 catatttttttc--cgcataaactattcattttctcttttcccacaacggaggagtgacaaatccaaataacaccg-tacgtaaattt--catctctttc 5560642  T
Q  805 actta-attttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagc 874  Q
    |||||  |||| | |||||||||||| |||||| |||||||| |||||| ||  ||||||||||| |||||    
T  5560643 acttatttttttatttattttgtttcatgtttagaagttcttttgattcagatcttttaatgaagtttagc 5560713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 12971354 - 12971470
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||||||||||||| ||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  12971354 ctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatc 12971453  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  12971454 gaaagaatcacaacaat 12971470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 25930552 - 25930668
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || |||||||| |||| ||||||||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||    
T  25930552 ctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataatcacttaatcagtcaacttgaaaagctatttcatt 25930651  T
Q  689 gaaaggatcacaacaat 705  Q
    |||||||||||||||||    
T  25930652 gaaaggatcacaacaat 25930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 643 - 814
Target Start/End: Complemental strand, 18127999 - 18127831
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||         |||| ||||||||||||||||| |||    
T  18127999 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaatta--tttttttcttcgcataaactattcgttttaccc 18127902  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaatttt 814  Q
    ||| | || |   ||||||||| | |||||| ||||| ||||||||||||| ||  |||||||||||||||||    
T  18127901 ttttccacaacaaaggagtgacaaatccaaacgacaccgttaggtaaattttac--ctctttcacttaatttt 18127831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 589 - 861
Target Start/End: Original strand, 30899604 - 30899876
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||  |||   |||||||||||||||||||| |||||||||| ||||||||||||||    
T  30899604 ctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatt 30899703  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |   |||| |||| | |||||| ||||| ||||| ||    
T  30899704 gaaagaatcacaacaatcatttttttttcttcgcataaaccattcgttttacccttttccacaacagaggaatgacaaatccaaacgacaccgttagata 30899803  T
Q  788 aatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||||||  ||||||||||||| ||||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  30899804 aatttcac--ctctttcacttaattttttttttaattcctttcatgtttagaagttcttctgattctgatttttt 30899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 643 - 957
Target Start/End: Original strand, 9 - 323
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||| |         |||| ||||||| ||||||||| |||    
T  9 aatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttaccc 106  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    ||| |||| |   ||||||||| | |||||| ||||| ||||| ||||||||||  |||||||||||||||||   ||| ||  |||| |||||  ||||    
T  107 ttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttggaagt 204  T
Q  842 tcttctgattctga----ctttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgg-gcctattttaaaaatagaaccgagcctc 936  Q
    |||| ||||| |||     |||||||||||| |||||||||||        | || |||||| ||||| || |||||||||||||| |||||||||||||    
T  205 tcttttgattttgattttttttttaatgaagtttagctacaca-aaaaaattacg-ttttattttactgggagcctattttaaaaagagaaccgagcctc 302  T
Q  937 ctatttcataggaacggccct 957  Q
    |||||||| |||||| |||||    
T  303 ctatttcacaggaacagccct 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 589 - 872
Target Start/End: Original strand, 15441238 - 15441516
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||||| ||||||||| | |||||||||||| |||  ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  15441238 ctagactctagttctcctttctagacataaatataatgctatcaaaccacctacaatttgtataatcacttaatcactcaatttataaagctatttcatt 15441337  T
Q  689 -gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggt 786  Q
      |||| ||||||||||| |          ||  ||||||  |||| ||||||| ||||| || |   | ||||||| | |||||| ||| | |||||||    
T  15441338 aaaaagaatcacaacaataattcttt----tttgcataaatcattcattttcccttttcc-acaacagaagagtgacaaatccaaacgacgccgttaggt 15441432  T
Q  787 aaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagctta 872  Q
    ||||||||| ||||||||||||| ||||   |||||  ||||| |||||| |||||||||||||| ||| ||||||||||||||||    
T  15441433 aaatttcacctctctttcacttattttt--tttattccgtttcatgtttagaagttcttctgattttgattttttaatgaagctta 15441516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 6150669 - 6150785
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||| |||||||| |||||||||||||||||||||||||||||||    
T  6150669 ctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcatt 6150768  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  6150769 gaaagaatcacaacaat 6150785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 12884253 - 12884137
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||| | |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||||||||| |||||||||||||||    
T  12884253 ctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcatt 12884154  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  12884153 gaaagaatcacaacaat 12884137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 590 - 705
Target Start/End: Original strand, 50552444 - 50552559
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50552444 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcggtcaatttgaaaagttatttcattg 50552543  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  50552544 aaagaatcacaacaat 50552559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 701
Target Start/End: Original strand, 38263812 - 38263924
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||| ||||| ||||||||||||||||||||| |||| || ||| ||||| || || ||||||||||||||||| |||| ||||||||||    
T  38263812 ctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatcagtcaatttaaaaaactatttcatt 38263911  T
Q  689 gaaaggatcacaa 701  Q
    || || |||||||    
T  38263912 gatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 613 - 861
Target Start/End: Complemental strand, 48722462 - 48722214
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnn 712  Q
    ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| |         
T  48722462 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatca--ttt 48722365  T
Q  713 nnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaa- 810  Q
        |||| ||||||| ||||||||| |||||| | || |   ||||||||| | |||||| ||||| ||||| ||||||||||  |||||| ||||||     
T  48722364 ttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaaatccaaacgacaccgttagataaatttcac--ctcttttacttaat 48722267  T
Q  811 --ttttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
      ||||   ||| ||| |||| |||||| |||||||||||||||||| |||||    
T  48722266 attttttttttaatttctttcatgtttagaagttcttctgattctgatttttt 48722214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 33124692 - 33124630
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  33124692 aatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaat 33124630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 767 - 878
Target Start/End: Original strand, 9777537 - 9777649
Alignment:
Q  767 tccaaatgacacagttaggtaaatttcacatctctttcacttaa-ttttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatg 865  Q
    |||||| ||||| |||||||||||||||| |||||||||||||| ||||   |||||| ||||| |||||| ||||| |||| ||||||| |||||||||    
T  9777537 tccaaacgacaccgttaggtaaatttcacttctctttcacttaattttttttttatttagtttcatgtttagaagttattctaattctgattttttaatg 9777636  T
Q  866 aagcttagctaca 878  Q
    ||| |||||||||    
T  9777637 aagtttagctaca 9777649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 589 - 861
Target Start/End: Complemental strand, 14084817 - 14084547
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||||| |||| ||||||||  |||   ||  ||||||||||||||||||||||||||  ||||||||||||||    
T  14084817 ctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcatt 14084718  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||| ||| |         |||| ||||||| ||||||||| |||||  | || |   ||||||||| | |||||| |||||  |||| ||    
T  14084717 gaaagaatcacaataatca-atttttttcttcgcataaaccattcgttttacccttctccacaacagaggagtgacaaatccaaacgacaccattagata 14084619  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    ||||||||  |||||||| ||||||||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  14084618 aatttcac--ctctttcatttaatttttttttaattcctttcatgtttagaagttcttctgattctgatttttt 14084547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 20905403 - 20905287
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||||||| | || ||||||||| | |   |||||||||||||||||| |||||||||||| ||  ||||||||||    
T  20905403 ctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatttgtataatcacttattcagtcaatttggaagtctatttcatt 20905304  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  20905303 gaaagaatcacaacaat 20905287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 51110193 - 51110101
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   ||||| ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  51110193 acataaatcggatcctatcaaaccacccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaat 51110101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 590 - 705
Target Start/End: Original strand, 52055501 - 52055616
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaa-ccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||||| |||||| |||| || |||||||| | ||  |||||||| | |||| ||||| |||||||||||||||| |||||||| ||||||||||||||    
T  52055501 tagactctagttctcctttttgtacataaatctaatcatatcaaactatccat-aatttatataatcacttaatcaatcaatttggaaagctatttcatt 52055599  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  52055600 gaaagaatcacaacaat 52055616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 642 - 705
Target Start/End: Complemental strand, 30004970 - 30004907
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||    
T  30004970 caatttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaatcgcaacaat 30004907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 17487399 - 17487283
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| |  ||||||||  ||| ||||||||| |||   ||||| |||||||||||||| | |||||||| |||| |||||||||    
T  17487399 ctagactctagttctcctttttttacataaatcggatcctatcaaaccacccctaatttatataatcacttaataaatcaatttggaaagttatttcatt 17487300  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  17487299 gaaagaatcacaacaat 17487283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 614 - 705
Target Start/End: Complemental strand, 28885762 - 28885671
Alignment:
Q  614 cataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||  ||| ||||||||| |||   |||||||||||||||||||||| |||||||  ||||||||||||||| ||| |||||||||||    
T  28885762 cataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaat 28885671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 589 - 814
Target Start/End: Complemental strand, 29208214 - 29207992
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||  ||| || |||||||| | ||  |||||||| |||   |||||||||||||| ||||||||||||| || ||  ||||||||||    
T  29208214 ctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcatttaatcagtcaatctggaagtctatttcatt 29208115  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || ||  ||||||||| | |||||||||||| ||| | ||    
T  29208114 gaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttacccttttccacaatagaggagtgacaaatccaaatgacaccgttggata 29208017  T
Q  788 aatttcacatctctttcacttaatttt 814  Q
    |||||  ||||||||| ||||||||||    
T  29208016 aattt--catctcttttacttaatttt 29207992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 66100 - 66162
Alignment:
Q  373 acatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||| || ||||||||||    
T  66100 acatcgaggccagaacaaccatacaagtgagaggcgccacactcttacccaaaaccttaaggc 66162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 32168673 - 32168774
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||||||| ||||||||||  ||||||  |||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || |||| ||||    
T  32168673 ttgttgggtcactaggggagccttaggggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaagg 32168772  T
Q  435 ca 436  Q
    ||    
T  32168773 ca 32168774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 22077472 - 22077570
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||| ||||||||  | ||||  ||||||||||||| ||||||| || ||||||||||    
T  22077472 tgttgggtcacaaggggagcct-gggggaccgtccatatcgatgcttgaacaaccgcataagtgagagagacgccacactcttacccaaaaccttaaggc 22077570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 3875333 - 3875407
Alignment:
Q  364 ggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||| |||||||||||||||||||||||| || |||  ||||||| ||||| |||||||||| |||||||||||    
T  3875333 ggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggca 3875407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 600 - 662
Target Start/End: Complemental strand, 31369494 - 31369432
Alignment:
Q  600 ttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaat 662  Q
    |||| |||||||||||||||| ||||| |||||||| ||  ||||||||||||||||||||||    
T  31369494 ttctcctttctggacataaatctgatgttatcaaaccactttcaatttgtataatcacttaat 31369432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 34649620 - 34649520
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| |||| |||   |||||||| |||||||||||||||||||||||| || ||   |||||||||| || ||||||| || ||||||||||    
T  34649620 tgttgggtcactagggaagctccgggggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggc 34649521  T
Q  436 a 436  Q
    |    
T  34649520 a 34649520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 41157176 - 41157112
Alignment:
Q  337 ttgttgggtcac--aaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    ||||||||||||  ||||||||||| ||||||||  ||||||||||||||||||||||| |||||    
T  41157176 ttgttgggtcactgaaggggagccttgggggaccgcccacatcgaggctagaacaaccacacaag 41157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 907 - 960
Target Start/End: Complemental strand, 51109899 - 51109846
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcc 960  Q
    |||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||    
T  51109899 gggcctattttaaaaagagagccgagcctcctatttcacagggacggccctgcc 51109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 698
Target Start/End: Original strand, 3907472 - 3907528
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatca 698  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||||||||| ||||    
T  3907472 caatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 705
Target Start/End: Original strand, 9777382 - 9777478
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttc-attgaaaggatcacaacaat 705  Q
    |||| |||||| |||||||| ||||| |||  |||||| |||||||||| |||||||||||||||| | ||||||| ||  |||| |||||||||||    
T  9777382 tggatataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaat 9777478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 1269507 - 1269615
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| | |||| |||||| ||||||||| ||||||||| |||| |||  ||||||||| ||| |        ||||||||||||||||||||||||    
T  1269507 ctagactctaattctcctttctagacataaatctgatgctatgaaaccacccccaatttgtaaaatta--------gtcaatttgaaaagctatttcatt 1269598  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  1269599 aaaagaatcacaacaat 1269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 705
Target Start/End: Complemental strand, 6333630 - 6333516
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| ||||||  || ||| |||||||| |||| ||||||||| | | | ||| |||| |||||||||||||||||| ||| |||| ||||| |||     
T  6333630 tagactctagttctcattcctgtacataaatctgatactatcaaaccatcct-aatctgtaaaatcacttaatcagtcaaattggaaagttattttatta 6333532  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  6333531 aaagaatcacaacaat 6333516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 643 - 686
Target Start/End: Complemental strand, 32810413 - 32810370
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    |||||| ||||||||||||||| |||||||||||||||||||||    
T  32810413 aatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 41142532 - 41142454
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatc-ttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||||||||||||||| |||||   ||||||||||||| || ||||| || |||||||||||    
T  41142532 gggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggca 41142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 362 - 433
Target Start/End: Original strand, 3537599 - 3537672
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||| |||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || ||||||||    
T  3537599 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 3537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 22077806 - 22077890
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtg--agagacgccacaatcttacc 421  Q
    |||||||||||||||||||||| || ||||| |||||||||| ||| ||||||||  | |||||  |||||||||||| |||||||    
T  22077806 tgttgggtcacaaggggagcct-ggaggaccgtccacatcgatgcttgaacaaccgcataagtgaaagagacgccacactcttacc 22077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 44290434 - 44290495
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    ||||||||||||  ||||||| | |||||||| ||||||||||||||||||||||| ||||||    
T  44290434 ttgttgggtcactgggggagc-tcgggggaccgtccacatcgaggctagaacaaccgtacaag 44290495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 50051665 - 50051718
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaac 391  Q
    |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  50051665 ttgttgggtcacgaggggagc-tagggggaccgtccacatcgatgctagaacaac 50051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 26661499 - 26661598
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga--cgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| ||| |||  |||||||||| |||| ||||||||| ||||||||| ||||| ||||||  | ||||| ||||||| || ||||||||||    
T  26661499 tgttgggtcacgaggagagt-tagggggaccgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggc 26661597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 793 - 878
Target Start/End: Complemental strand, 39080535 - 39080451
Alignment:
Q  793 cacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||||||||| |||||| ||   ||||||  |||| |||||| |||||||| ||||||||| |||| |||||||||||||||||    
T  39080535 cacatctctttcgcttaatatttt-ttatttcatttcatgtttagaagttcttatgattctgatttttcaatgaagcttagctaca 39080451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 26661877 - 26661974
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||| |||||||| ||||| |||||||| |||| ||| | ||||||||| |||||   ||||||| ||||| ||||||| || |||||||||||    
T  26661877 ttgggtcacgaggggagc-tagggagaccatccgcatcaaggattgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 26661974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 798 - 861
Target Start/End: Complemental strand, 33124551 - 33124489
Alignment:
Q  798 ctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||||||||||||||||   ||| || ||||| ||||||||||||||||||||||||| |||||    
T  33124551 ctctttcacttaatttttt-ttaattcgtttcatgtttaaaagttcttctgattctgaattttt 33124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 14319026 - 14318949
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||| |||||||||||||||  |||| |  ||||||| ||||| ||||||| || |||||||||||    
T  14319026 gggggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggca 14318949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 31767160 - 31767237
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| ||||||||||| |||||||||||| |||||   || ||||| |||| ||||||| || |||||||||||    
T  31767160 gggggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggca 31767237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 41157546 - 41157496
Alignment:
Q  349 aaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    ||||||||||| | ||||||  ||||||||||||||||||||||| |||||    
T  41157546 aaggggagccttgagggaccgcccacatcgaggctagaacaaccacacaag 41157496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 365 - 436
Target Start/End: Original strand, 48588491 - 48588564
Alignment:
Q  365 gaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||| |||||||||||||||||||||||  ||||||  ||||||| || || ||||||| || |||||||||||    
T  48588491 gaccgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggca 48588564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 910 - 959
Target Start/End: Complemental strand, 18127736 - 18127687
Alignment:
Q  910 cctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    |||||||| |||| |||||||| |||||||||||| ||| ||||||||||    
T  18127736 cctattttgaaaagagaaccgaacctcctatttcacagggacggccctgc 18127687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 41759641 - 41759565
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||| |||||||| ||||||||||||||| | |||   ||||||| ||||| ||||||| || |||||||||||    
T  41759641 ggggaccgtccacatcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggca 41759565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 2e-98; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 590 - 959
Target Start/End: Original strand, 17325793 - 17326160
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaag-ctatttcatt 688  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  17325793 tagactctagttccactttctggacataaatttgatgctattaaactaccatcgatttgaataatcacttaatcagtcaatttgaaaaaactatttcatt 17325892  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  17325893 gaaagaatcacaacaattatttcttt---ttcgcataaaccattcgctttcccctttcctacgacgtaggagtgacattccaaacgacaccgttaggtaa 17325989  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| | |||||||||| ||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||            
T  17325990 atttcacctatctttcactttattttattttgttttgtttcgtgtttaaaagttcttctgattctgattttttaatgaattttagctacacaaaaagaat 17326089  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    |||||||| || ||||| | |||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  17326090 tgcgttttgattttactggagcctattttaaaaatagaaccgagcctcatatttcatagaaactgccctgc 17326160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 589 - 959
Target Start/End: Original strand, 138092 - 138458
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  138092 ctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 138191  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatg-acacagttaggta 787  Q
    ||||  |||||||||||||          | | ||||||| |||||||||||||||| |||||| |||| ||||||||||||| || | || |||| |||    
T  138192 gaaataatcacaacaattattttttt---tccgcataaaccattcgttttccccttt-ctacgaagtagtagtgacattccaagtgaaaaccgttaagta 138287  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    |||||||| |||||||||||||||||||  || ||||||||| ||||||||||||||| ||||| ||| || |||||||| ||||||||||||           
T  138288 aatttcacctctctttcacttaattttattttgttttgtttcctgtttaaaagttcttttgattttgatttcttaatgaaacttagctacacaaaaaaaa 138387  T
Q  888 ntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
     | ||||||||| |||||   ||||||| ||||||||||||| |||||| ||||||||||||| | ||||||    
T  138388 at-cgtttttattttactgaagcctattctaaaaatagaaccaagcctcttatttcataggaatgaccctgc 138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 598 - 951
Target Start/End: Original strand, 18873410 - 18873766
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatt----tgtataatcacttaatcagtcaatttgaaaagctatttcattgaaag 693  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||    ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  18873410 agttttactttctgaacataaatttgatgctatcaaaccaccatcaattaatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaag 18873509  T
Q  694 gatcacaacaattannnnnnnnncttcacataaac---tattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaat 790  Q
     |||||||||||||          ||| |||||||   |||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||    
T  18873510 aatcacaacaattatttcttt---ttcgcataaaccattattcgttttcccctttcctacgacgtaggagtgacattccaaacgaaaccgttaggtaaat 18873606  T
Q  791 ttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntg 890  Q
    ||||| | |||||||||||| ||||  || ||||||||| |||||||||||| |||||||||| | |||||||||||| ||| |||||||        |     
T  18873607 ttcacctttctttcacttaactttattttgttttgtttcatgtttaaaagtttttctgattctaattttttaatgaagtttaactacacaataaaaatta 18873706  T
Q  891 cgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaac 951  Q
    ||||||||| ||| |  | |||||||| |||||||||||||||||||||||| ||||||||    
T  18873707 cgtttttattttagtgagacctatttt-aaaatagaaccgagcctcctattttataggaac 18873766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 645 - 957
Target Start/End: Complemental strand, 7390460 - 7390152
Alignment:
Q  645 tttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctt 744  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||          ||| ||||||| |||||||||||||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttcttt---ttcgcataaaccattcgttttcccctt 7390364  T
Q  745 tcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttct 844  Q
    |||| |||  ||| |||||||||| ||| ||||| ||||| |||||||||| |||||||||||||||||||  || ||||||||  ||||||||||||||    
T  7390363 tcctgcgacatagaagtgacattc-aaacgacaccgttagataaatttcacctctctttcacttaattttattttgttttgttttatgtttaaaagttct 7390265  T
Q  845 tctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttca 944  Q
    |||||||| || |||||||||||||||||||||||||       | ||||||||| ||| | ||| ||||||||||||||||||||||||| ||||||||    
T  7390264 tctgattccgattttttaatgaagcttagctacacacaaaaaattacgtttttattttattagggactattttaaaaatagaaccgagccttctatttca 7390165  T
Q  945 taggaacggccct 957  Q
    |||||||||||||    
T  7390164 taggaacggccct 7390152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 735 - 956
Target Start/End: Original strand, 16515596 - 16515817
Alignment:
Q  735 ttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtt 834  Q
    |||| |||||| ||||||||||||||||||||||||||||||||  |||| |||||||||| ||| |||||||||||||||  || ||||||||| ||||    
T  16515596 tttttcccttttctacgatgtaggagtgacattccaaatgacaccattagctaaatttcacctctttttcacttaattttattttgttttgtttcatgtt 16515695  T
Q  835 taaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcc 934  Q
    | ||||||||||| ||||||||||||| |||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||| ||    
T  16515696 ttaaagttcttctcattctgactttttcatgaagcttagctacacacaaaaaaatgcgtttttattttactcgggcctattttaaaaatagaaccgaacc 16515795  T
Q  935 tcctatttcataggaacggccc 956  Q
    ||||||||||||||||||||||    
T  16515796 tcctatttcataggaacggccc 16515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 589 - 880
Target Start/End: Original strand, 10033494 - 10033787
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaat-cagtcaatttgaaaagctatttcat 687  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| | |  ||||||||||||||||||||| ||    
T  10033494 ctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctattttat 10033593  T
Q  688 tgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggta 787  Q
    |||||| ||||||| |||||          ||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||| || || ||||||||    
T  10033594 tgaaagaatcacaataattatttcttt---ttcgcataaaccattcgtttt-ccctttcctacgacgtaggagtgacattccaaacgaaaccgttaggta 10033689  T
Q  788 aatttcacatctctttcacttaattttaagtta-----ttttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    |||||||| |||||||||||||||||||  |||     ||||||||| ||||||||||||||||||||||||| ||||||| |||  ||| |||||||    
T  10033690 aatttcacctctctttcacttaattttattttattttgttttgtttcatgtttaaaagttcttctgattctgattttttaacgaaatttaactacaca 10033787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 589 - 958
Target Start/End: Original strand, 43511566 - 43511935
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||||||||||||| || | ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  43511566 ctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatg 43511665  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          |||| |||||| ||||||||| |||||||| || | | |  |||||| | |||||| ||||| |||| |||    
T  43511666 gaaagaatcacaacaatcatttcttt---ttcatataaaccattcgtttttccctttcccacaacggataagtgacaaatccaaacgacaccgtta-gta 43511761  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacac--acnnnn 885  Q
    ||||  || ||||||||||||||||||    ||||| ||||| |||||| ||| ||| |||||||||| |||||||| ||||||||||||||  |         
T  43511762 aattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctctgctgattctgattttttaataaagcttagctacacaaaaaaaa 43511861  T
Q  886 nnntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
       ||||||||||| ||| |  |||||||||||||| | ||| ||||||||||||||||||||| ||| |||||    
T  43511862 aattgcgtttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacgaccctg 43511935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 612 - 880
Target Start/End: Original strand, 20975956 - 20976221
Alignment:
Q  612 gacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnn 711  Q
    |||||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |        
T  20975956 gacataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttc 20976055  T
Q  712 nnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaa 810  Q
          ||||||||||||||||||||||  |||||| || | | |  |||||| | |||||||||||| |||| |||||||  || ||||||||||||||    
T  20976056 ttt---ttcacataaactattcgttttcgtctttcccacaacggataagtgacaaatccaaatgacaccgtta-gtaaattctacctctctttcacttaa 20976151  T
Q  811 ttttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||    ||||| |||   |||||||||| |||||||||| ||| |||||||| |||| ||||||||||    
T  20976152 tttttttgtatttggttcaatgtttaaaagctcttctgattatgattttttaataaagcatagctacaca 20976221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 598 - 880
Target Start/End: Complemental strand, 42291988 - 42291707
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| || |||||||||||||||| | ||||||||  |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  42291988 agttctcctatctggacataaatttggtactatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatc 42291889  T
Q  698 acaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcaca 796  Q
    |||||||| |          ||||||||||| |||||||||||||||||| ||   | |  |||||| | |||||||| ||  ||| ||||||||  ||     
T  42291888 acaacaatcatttcttt---ttcacataaaccattcgttttcccctttcccaccgcggataagtgacaaatccaaatgtcatcgtt-ggtaaattctacc 42291793  T
Q  797 tctctttcacttaattttaagt--tattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||||||||||||||   |  ||||| ||||| |||||| ||| |||||||||||||| ||||| || ||| ||| |||||||    
T  42291792 tctctttcacttaatttttttttgtatttcgtttcatgtttagaagctcttctgattctgatttttttataaagtttaactacaca 42291707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 589 - 958
Target Start/End: Complemental strand, 3349844 - 3349479
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||||||||||||||| | | ||||||| || | ||||| | ||||| ||||||||||||||||||||||||||||||||     
T  3349844 ctagactttagttctcctatctggacataaatttggtac-atcaaaccactaccaattggaataatgacttaatcagtcaatttgaaaagctatttcata 3349746  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          |||||||||||  ||||||||||||||||| || | | |  |||||| | ||||||| |||| |||| |||    
T  3349745 gaaagaatcacaacaatcatttcttt---ttcacataaaccgttcgttttcccctttcccacaacggataagtgacaaatccaaatcacaccgtta-gta 3349650  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    ||||  || ||||||||||| || |||    ||||| ||||| |||||| ||  |||||||||||||| |||||||| |||||||||||||||           
T  3349649 aattatacctctctttcactcaagttttttgtatttagtttcatgtttagaaactcttctgattctgattttttaataaagcttagctacaca-aaaaaa 3349551  T
Q  888 ntgcgtttttatcttactcg-ggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
     ||||||||||| ||| | | | ||||||||||| | ||| ||||||||||||||||||||| |||| ||||    
T  3349550 ttgcgtttttattttattggagacctattttaaatagagagccgagcctcctatttcatagggacggtcctg 3349479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 880
Target Start/End: Original strand, 27351297 - 27351585
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| ||||||| ||||||||||| ||||||||||| |||  |||||||||||| ||||||||||||||||||| |||| |||||||||    
T  27351297 ctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataaccacttaatcagtcaatttggaaagttatttcatt 27351396  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| || ||   ||| |          ||  ||||||| | || |||||  |||||| || | | ||||||||| | || ||| |||||  |||||||    
T  27351397 gaaagaataacctaaatcatttcttt---tttgcataaaccagtcattttcttctttcccacaacggaggagtgacaaatctaaacgacactattaggta 27351493  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    |||||||| ||||||||||||||||||   ||||||  |||| |||||| |||||||||||||||  | |||||||||||| |||||||||||    
T  27351494 aatttcacctctctttcacttaatttt-ttttatttcctttcatgtttagaagttcttctgattcgaattttttaatgaagtttagctacaca 27351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 643 - 957
Target Start/End: Original strand, 13423866 - 13424178
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||| |         |||| ||||||| ||||||||| |||    
T  13423866 aatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatca--tttttttcttcgcataaaccattcgttttaccc 13423963  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    ||| | || ||  ||||||||| | || ||| ||||| ||| | ||||||||||  |||||||||||||||||   ||| ||  |||| |||||||||||    
T  13423964 ttttccacaatagaggagtgacaaatctaaacgacaccgttcgataaatttcac--ctctttcacttaatttttttttaattcctttcatgtttaaaagt 13424061  T
Q  842 tcttctgattctga--ctttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcg-ggcctattttaaaaatagaaccgagcctcct 938  Q
    ||||||||||||||   |||||||||||  ||| |||||||        |  |||||||||||||| | | ||||||||||||| ||| |||||||||||    
T  13424062 tcttctgattctgattttttttaatgaaatttaactacaca--aaaaaattagtttttatcttactagagacctattttaaaaagagagccgagcctcct 13424159  T
Q  939 atttcataggaacggccct 957  Q
    |||||| ||| ||||||||    
T  13424160 atttcacagggacggccct 13424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 589 - 961
Target Start/End: Complemental strand, 10591389 - 10591022
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||| |||||||| || | ||||||||| |||  ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  10591389 ctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaatttgaaaagttatttcatt 10591290  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtga-cattccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          |||||| |||  ||||||| |||||||||| || | | |  ||| | || |||||| | ||| |||| |||    
T  10591289 gaaagaatcacaacaatcatttattt---ttcacaaaaatcattcgttatcccctttcccacaacggataagtaatcaatccaaacggcaccgtta-gta 10591194  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    ||||  || ||||||||||||||||||    ||||| ||||| |||||| ||  | |||||||||||| |||||||| ||||||| |||||||           
T  10591193 aattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaaactattctgattctgattttttaataaagcttaactacaca-aaaaaa 10591095  T
Q  888 ntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcct 961  Q
     ||||||||||| ||| | | | |||||||||| | ||| ||||||||||||||||||||| |||||| |||||    
T  10591094 ttgcgtttttat-ttattggcgtctattttaaatagagagccgagcctcctatttcatagggacggccatgcct 10591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 598 - 707
Target Start/End: Original strand, 16515481 - 16515590
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    ||||||||||||| ||||||||||||||||||| |||  |||||||||||  ||||||||||||||| ||||||||||||  ||||| |||||||| |||    
T  16515481 agttctactttctagacataaatttgatgctattaaaacaccatcaattttaataatcacttaatcaatcaatttgaaaaattattttattgaaagaatc 16515580  T
Q  698 acaacaatta 707  Q
    ||||||||||    
T  16515581 acaacaatta 16515590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 589 - 814
Target Start/End: Complemental strand, 4734698 - 4734476
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||||||||||||| || | ||||||||| |||| |||||||||||||| ||| |||| |||||||||||| ||||||||||    
T  4734698 ctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctatttcatt 4734599  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          ||||||||||| |||||||||||| ||||| ||   | |  |||||| | |||||||||||| |||| |||    
T  4734598 gaaagaatcacaacaatcatttcttt---ttcacataaaccattcgttttcccatttcccacagcggataagtgacaaatccaaatgacaccgtta-gta 4734503  T
Q  788 aatttcacatctctttcacttaatttt 814  Q
    ||||  |||||||||||||||||||||    
T  4734502 aattctacatctctttcacttaatttt 4734476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 40956261 - 40956377
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| ||||||||||| |||||| ||||||||  |  ||||||||||||||||||||||| | |||||||||| ||||||||||    
T  40956261 ctagactctagttctcctttgtggacataaatctgatgcaatcaaacattctccaatttgtataatcacttaatcatttaatttgaaaaactatttcatt 40956360  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  40956361 aaaagaatcacaacaat 40956377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 643 - 861
Target Start/End: Original strand, 12661311 - 12661524
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccc 742  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||           |||| ||||||| ||||||||| |||    
T  12661311 aatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaat--attttttttcttcgcataaaccattcgttttaccc 12661408  T
Q  743 tttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    ||| | || |   ||||||||| | |||||| ||||| ||||| |||||||||||  ||||||||||||||||   ||| ||  |||| |||||| ||||    
T  12661409 ttttccacaacagaggagtgacaaatccaaacgacactgttagataaatttcaca--tctttcacttaatttt--tttaattcctttcatgtttagaagt 12661504  T
Q  842 tcttctgattctgacttttt 861  Q
    |||||||||||||| |||||    
T  12661505 tcttctgattctgatttttt 12661524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 598 - 705
Target Start/End: Complemental strand, 19099421 - 19099314
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| |||| || |||||||| |||| ||||||||| | |   |||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  19099421 agttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatc 19099322  T
Q  698 acaacaat 705  Q
    ||||||||    
T  19099321 acaacaat 19099314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 608 - 880
Target Start/End: Original strand, 29156157 - 29156426
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaatta 707  Q
    |||| |||||||| || | ||||||||| |||   |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |    
T  29156157 tctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatca 29156256  T
Q  708 nnnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcac 806  Q
              |||| |||||| |||||||||||||||||| || | | |  |||||| | | |||| || || |||| |||||||  || |||||||||     
T  29156257 tttcttt---ttcatataaaccattcgttttcccctttcccacaacggataagtgacaaattcaaacgataccgtta-gtaaattctacctctctttcaa 29156352  T
Q  807 ttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||||    ||||||||||| |||||| ||| ||| |||||| ||| |||||||| ||| |||||||||||    
T  29156353 ttaatttttttgtattttgtttcatgtttagaagctctactgattttgattttttaataaagtttagctacaca 29156426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 13656155 - 13656274
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatc---aatttgtataatcacttaatcagtcaatttgaaaagctatttc 685  Q
    |||||||| |||||| |||| || ||||||||  ||| |||  ||| |||||||   |||||||||||||||||||||||||||||||||||| ||||||    
T  13656155 ctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataatcacttaatcagtcaatttgaaaagttatttc 13656254  T
Q  686 attgaaaggatcacaacaat 705  Q
    |||||||| |||||||||||    
T  13656255 attgaaagaatcacaacaat 13656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 589 - 880
Target Start/End: Complemental strand, 17514052 - 17513764
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || |||||| |||||| || | ||| ||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||| |    
T  17514052 ctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcact 17513953  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          ||||||||||| ||||||||| |||||||| || | | |  |||||| | |||||| ||    ||| ||||    
T  17513952 gaaagaatcacaacaatcatttcttt---ttcacataaaccattcgtttttccctttcccacaacggataagtgacaaatccaaacgaggtcgtt-ggta 17513857  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||  || ||||||||||||||||||    ||||| ||||| |||||| ||| ||||||||||||   |||||||| ||||||| |||||||    
T  17513856 aattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctatttttttaataaagcttaactacaca 17513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 26377890 - 26377774
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   |||||||||||||||||| ||||||||| ||| |||||||||||||    
T  26377890 ctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataatcacttattcagtcaatgtgagaagctatttcatt 26377791  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  26377790 gaaagaatcacaacaat 26377774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 598 - 705
Target Start/End: Original strand, 5829342 - 5829447
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| || ||| ||||||||| || | ||||||||| | | ||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||    
T  5829342 agttctcctatcttgacataaatctggtactatcaaaccaacctcaatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatc 5829439  T
Q  698 acaacaat 705  Q
    ||||||||    
T  5829440 acaacaat 5829447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 613 - 705
Target Start/End: Original strand, 13474602 - 13474694
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||  ||| ||||||||| |||   |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  13474602 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaat 13474694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 36568568 - 36568643
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||| ||||||| || |||||||||||    
T  36568568 gggggaccttccacatcgaggatagaacaaccacacaagagagagacgccacactcttaccaaaaaccttaaggca 36568643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 589 - 853
Target Start/End: Original strand, 40779140 - 40779399
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||| || |||||| ||||||| |||||||||||||| |||||||| | |  ||||||||||||||  ||||| |||||||||||||| ||||| ||||    
T  40779140 ctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactattccatt 40779239  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    | | | ||||||||||| |          |||  |||||| |||||||||  ||||||| || ||| ||||||||| | || ||| ||||   |||||||    
T  40779240 g-aggaatcacaacaatcatttctttt--ttcgtataaaccattcgtttt--cctttcccacaatggaggagtgacaaatcgaaacgacatcattaggta 40779334  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattct 853  Q
    |||||||| ||||||||||||||||||   ||||||  |||| ||||||||| ||||||| |||||    
T  40779335 aatttcacctctctttcacttaatttt-ttttatttcatttcatgtttaaaatttcttcttattct 40779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 769 - 878
Target Start/End: Original strand, 23069350 - 23069458
Alignment:
Q  769 caaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaag 868  Q
    |||| ||||| |||||||||||||||||| ||||||| ||||||||   |||||  ||||| | |||| |||||||||| ||| ||| ||||||||||||    
T  23069350 caaacgacaccgttaggtaaatttcacatttctttcatttaatttt-ttttattacgtttcatatttagaagttcttctaattttgattttttaatgaag 23069448  T
Q  869 cttagctaca 878  Q
    ||||||||||    
T  23069449 cttagctaca 23069458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 589 - 702
Target Start/End: Complemental strand, 36718683 - 36718570
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || |||| |||  ||| ||||||||| |||   |||||||||||||| |||||||||||||||| |||| ||||| |||    
T  36718683 ctagactctagttctcctttttgtacatgaatcggatcctatcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagttattttatt 36718584  T
Q  689 gaaaggatcacaac 702  Q
    ||||| ||||||||    
T  36718583 gaaagaatcacaac 36718570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 1028493 - 1028591
Alignment:
Q  338 tgttgggtcaca-aggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||||||  |||||||| |||||||||| |||||||||||||||||||||||  ||||||  ||||||||||||| ||||||| || |||||||||    
T  1028493 tgttgggtcactgaggggagc-tagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaagg 1028591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 600 - 688
Target Start/End: Original strand, 23069179 - 23069267
Alignment:
Q  600 ttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||| ||||||| |||||||| |||||||| ||||| |||  |||||||||||||| |||||||| || ||||| ||||||||||||||    
T  23069179 ttctcctttctgaacataaatatgatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatttcatt 23069267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 818 - 879
Target Start/End: Original strand, 4177374 - 4177435
Alignment:
Q  818 ttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacac 879  Q
    |||||||||||| |||||| |||||||||||||| ||| |||||||||||||||| ||||||    
T  4177374 ttattttgtttcatgtttagaagttcttctgattatgattttttaatgaagcttaactacac 4177435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 644 - 952
Target Start/End: Original strand, 33281677 - 33281981
Alignment:
Q  644 atttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccct 743  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||| ||| ||| |          ||| ||||||| ||| | ||| || |    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcatttcttt---ttcgcataaaccatttgcttttcctt 33281773  T
Q  744 ttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagtt 842  Q
    |||| || | | | ||||||| | | |||| ||||  |||| ||||||||||| |||||||||||| |||||    ||||||||||| |||||| |||||    
T  33281774 ttcccacaacggatgagtgacaaattcaaacgacatcgttaagtaaatttcacctctctttcactt-atttttttatattttgtttcatgtttagaagtt 33281872  T
Q  843 cttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctattt 942  Q
    ||| ||||| |||  ||||||||||| ||| |||||||        ||||||||||| |||||  | ||||||||||||| |||  | | |||| |||||    
T  33281873 cttttgattatgatcttttaatgaagtttaactacaca-aaaagattgcgtttttattttactgagacctattttaaaaagagagtcaaacctcatattt 33281971  T
Q  943 cataggaacg 952  Q
    ||||||||||    
T  33281972 cataggaacg 33281981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 818 - 878
Target Start/End: Original strand, 13288617 - 13288677
Alignment:
Q  818 ttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||||||||| |||||||| |||||||||||| ||| ||||||||||| ||||||||||    
T  13288617 ttattttgtttcatgtttaaatgttcttctgattatgattttttaatgaaacttagctaca 13288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 42405597 - 42405672
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||||||||||||||  |||||  |||||| ||||| ||||||| || |||||||||||    
T  42405597 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagacaccacactcttacccaaaaccttaaggca 42405672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 6500619 - 6500532
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||| |||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  6500619 aggggagcct-gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 6500532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 931354 - 931422
Alignment:
Q  615 ataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatt 683  Q
    |||||||||||||||| |||  ||   |||||||||||||||||||||||||||||||  |||||||||    
T  931354 ataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagctatt 931422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 686
Target Start/End: Complemental strand, 37029095 - 37029051
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  37029095 caatttgtataatcacttaatcaatcaatttaaaaagctatttca 37029051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 908 - 955
Target Start/End: Original strand, 41612987 - 41613034
Alignment:
Q  908 ggcctattttaaaaatagaaccgagcctcctatttcataggaacggcc 955  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  41612987 ggcctattttaaaaagagagcagagcctcctatttcataggaacggcc 41613034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 18603096 - 18603196
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaagg 434  Q
    ||||||||| || ||||||||| ||| | ||| ||||||||||||||||||| |||| |||||   |||||| |||||| ||||||| || |||||||||    
T  18603096 ttgttgggttacgaggggagcc-aggagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaagg 18603194  T
Q  435 ca 436  Q
    ||    
T  18603195 ca 18603196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 26590909 - 26590986
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||| |||||||||||||||| ||||||||||| || |||  ||||||||||||| ||||||  || |||||||||||    
T  26590909 ggggaaccatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggca 26590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 27502012 - 27502073
Alignment:
Q  337 ttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    |||||||||||  |||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  27502012 ttgttgggtcatgaggggagc-tagggggaccgtccacatcgaggatagaacaaccacacaag 27502073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 32487552 - 32487475
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||||||||||||||||||||||||| | |||   |||| ||| |||| ||||||| || |||||||||||    
T  32487552 gggggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggca 32487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 6500991 - 6500904
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||| |||||||| |||||||||||||||||| ||||  ||||||  ||||||| ||||| ||||| | || |||||||||||    
T  6500991 aggggagcct-gggggaccgtccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggca 6500904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 767 - 880
Target Start/End: Complemental strand, 8379383 - 8379271
Alignment:
Q  767 tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatga 866  Q
    |||||| ||||| |||  ||||||||||| ||||||||||||||| ||   || ||| ||||| |||||| ||| ||||||||| || | ||||||||||    
T  8379383 tccaaacgacaccgttgcgtaaatttcacctctctttcacttaatatt-ttttttttcgtttcatgtttagaagatcttctgatacttattttttaatga 8379285  T
Q  867 agcttagctacaca 880  Q
    ||| || |||||||    
T  8379284 agcataactacaca 8379271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 767 - 880
Target Start/End: Complemental strand, 19099253 - 19099141
Alignment:
Q  767 tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt--aat 864  Q
    |||||| ||||| ||||| ||||||||||  |||||||||||||||||   | ||| | |||| |||||| |||||||||||||||||| |||||  |||    
T  19099253 tccaaacgacaccgttagataaatttcac--ctctttcacttaatttttcttaattct-tttcatgtttagaagttcttctgattctgaattttttcaat 19099157  T
Q  865 gaagcttagctacaca 880  Q
    |||| ||||||| |||    
T  19099156 gaagtttagctaaaca 19099141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 34753033 - 34753101
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||||||||||||  |||||   ||||||||||||| ||||||| || |||||||||||    
T  34753033 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggca 34753101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 624378 - 624310
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||| |||||   || |||| ||| |||||||||||||||||||||||  ||||||||||||    
T  624378 tgttgggtcactagggggagctcggggaaccgtccacatcgaggctagaacaaccccacaagtgagaga 624310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 3295343 - 3295382
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  3295343 agggggaccgtccacatcgaggctagaacaaccacacaag 3295382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 911 - 957
Target Start/End: Original strand, 931636 - 931682
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcataggaacggccct 957  Q
    |||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  931636 ctattttaaaaagagagccgaacctcctatttcataggaacgaccct 931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 35150865 - 35150819
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaagtgagaga 406  Q
    ||||||||||||||||||||||||| ||||| || || |||||||||    
T  35150865 agggggaccatccacatcgaggctaaaacaatcacactagtgagaga 35150819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 40296314 - 40296391
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||| ||||||    
T  40296314 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggca 40296391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 15370258 - 15370182
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    |||||||| ||||||||||||||||||||| |  |||||   ||||||| ||||| ||||||| || ||||||||||    
T  15370258 gggggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggc 15370182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 831 - 880
Target Start/End: Original strand, 16061085 - 16061134
Alignment:
Q  831 tgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    |||||| || || |||||||||||| |||||||||||||||| |||||||    
T  16061085 tgtttagaattttttctgattctgattttttaatgaagcttaactacaca 16061134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 818 - 879
Target Start/End: Original strand, 17463019 - 17463080
Alignment:
Q  818 ttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacac 879  Q
    |||||| ||||| |||||| |||||||||| |||||   |||||||||||||||| ||||||    
T  17463019 ttatttcgtttcatgtttagaagttcttctaattctagttttttaatgaagcttaactacac 17463080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 1e-77; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 589 - 855
Target Start/End: Complemental strand, 3628863 - 3628600
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||    
T  3628863 ctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataatcagtcaatttgaaaagttatttcatt 3628764  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||||||||||||          ||| ||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||    
T  3628763 gaaagaatcacaacaattatttcttt---ttcgcataaaccattcgtttttccgtttcctacgacgtaggagtgacattccaaacgacacagttaggtaa 3628667  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga 855  Q
    ||||||| |||||||||||||||||||  || |||| |||| ||||||||||||||| |||||||||    
T  3628666 atttcacctctctttcacttaattttattttgttttctttcatgtttaaaagttcttttgattctga 3628600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 590 - 959
Target Start/End: Original strand, 42076056 - 42076423
Alignment:
Q  590 tagactccagttctactttctggacataaatttgat-gctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    ||||||| | |||||||||||| ||||||||||  | |||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||  ||||    
T  42076056 tagactctaattctactttctgaacataaatttttttgctatcaaactatcatcaatttgtataataacttaatcaatcaatttgaaaagctataacatt 42076155  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaa 788  Q
    ||||| |||| || ||| |          | | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  42076156 gaaagaatcataataataattatttttt-tccgcataaactattcgttttccccttttctacga-gtaggagtgacattccaaatgacaccgttaggtaa 42076253  T
Q  789 atttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnn 888  Q
    ||||||| | |||||||||||||||||  || ||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||            
T  42076254 atttcacctatctttcacttaattttattttgttttgtttcatgtttaaaagttcttttgattctgattttttaatgaagcttatctacacaaaaagaat 42076353  T
Q  889 tgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctgc 959  Q
    |||||||| || ||||| ||||||||||||| ||||||||||| |||| ||||||| | ||||||||||||    
T  42076354 tgcgttttgat-ttactggggcctattttaacaatagaaccgaacctcttatttcacatgaacggccctgc 42076423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 743 - 960
Target Start/End: Original strand, 35874998 - 35875217
Alignment:
Q  743 tttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagtt 842  Q
    |||||||||| |||||||||||||| |||||||||  |||||||||| | ||| |||| ||||||||||||||  |||||||||||| ||||||||||||    
T  35874998 tttcctacgacgtaggagtgacatttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaagtt 35875097  T
Q  843 cttctgattctgactttttaatgaagcttagctacac--acnnnnnnntgcgtttttatcttactcgggcctattttaaaaatagaaccgagcctcctat 940  Q
    ||||||||||||| ||||||||||||||||| |||||  |         |||||||||| ||||||| | ||||||||||||||||||||| ||||||||    
T  35875098 cttctgattctgattttttaatgaagcttagttacacaaaaaaaaaaaagcgtttttattttactcgagtctattttaaaaatagaaccgaacctcctat 35875197  T
Q  941 ttcataggaacggccctgcc 960  Q
    ||||||| ||||||||||||    
T  35875198 ttcatagtaacggccctgcc 35875217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 659 - 867
Target Start/End: Complemental strand, 36515202 - 36514996
Alignment:
Q  659 taatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtagg 758  Q
    |||||||| ||||| |||| ||||||||||||||| |||||||||||||         |||| ||||||  ||| |||||||| |||||||||| |||||    
T  36515202 taatcagttaatttaaaaaactatttcattgaaagaatcacaacaattattttttt--cttcgcataaatcatttgttttcccatttcctacgacgtagg 36515105  T
Q  759 agtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactt 858  Q
    |||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||    
T  36515104 agtgacattccaaacgacaccgttagataaatttcagctctctttcacttaattttattttgttttgtttcgtgtttaaaagttcttctgattctgattt 36515005  T
Q  859 tttaatgaa 867  Q
    |||||||||    
T  36515004 tttaatgaa 36514996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 589 - 878
Target Start/End: Complemental strand, 32098294 - 32098007
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||| | |||| |||||||||||||||||||||||||| ||  | ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  32098294 ctagactctagttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcatt 32098195  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| |||||||||||||          ||  ||||||| ||||||||||||| |||| || |   ||||||||| | |||||| ||||| |||| |||    
T  32098194 gaaagaatcacaacaattatttcttt---tttgcataaaccattcgttttccccattcccacaacagaggagtgacgaatccaaacgacaccgttacgta 32098098  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||||| ||||||||||||||||||   |||||| ||||| |||||| |||||| |||||||  || |||||||||| |||||| ||||    
T  32098097 aatttcacttctctttcacttaatttttttttatttcgtttcatgtttagaagttcatctgatttcgattttttaatgatgcttagttaca 32098007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 589 - 953
Target Start/End: Complemental strand, 34524067 - 34523709
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||||||||||||| || | ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  34524067 ctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 34523968  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |          |||| |||||| |||||||||||||||||| || | | |  |||||| | |||||| ||||| ||||  ||    
T  34523967 gaaagaatcacaacaatcatttcttt---ttcatataaaccattcgttttcccctttcccacaacggataagtgacaaatccaaacgacaccgtta-tta 34523872  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnn 887  Q
    ||||  ||  |||||||||||||||||    ||||| ||||| |||||| ||| |||||||||||||| |||||||| |||||||||||||||           
T  34523871 aattctac--ctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctga-tttttaataaagcttagctacaca-aaaaaa 34523776  T
Q  888 ntgcgtttttatcttact-cgggcctattttaaaaatagaaccgagcctcctatttcataggaacgg 953  Q
     ||||||||||| ||| |  |||||||||||||| | ||| ||||||||||||||||||||| ||||    
T  34523775 ttgcgtttttattttattgggggcctattttaaatagagagccgagcctcctatttcatagggacgg 34523709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 624 - 841
Target Start/End: Original strand, 29372340 - 29372554
Alignment:
Q  624 atgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcaca 723  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||| |||| ||||  |||||||| || |||||||| |          ||| ||    
T  29372340 atgctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcatttattt---ttcgca 29372436  T
Q  724 taaactattcgttttcccctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattt 823  Q
    ||||| |||| ||||||||||| | |||||| |||||||||| |||||| |||||  ||||||||||||||||| | |||||||||||||||  ||||||    
T  29372437 taaaccattcattttcccctttgccacgatgaaggagtgacaatccaaacgacaccattaggtaaatttcacatttgtttcacttaattttattttattt 29372536  T
Q  824 tgtttcgtgtttaaaagt 841  Q
     ||||| |||||| ||||    
T  29372537 cgtttcatgtttagaagt 29372554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 707
Target Start/End: Original strand, 35874872 - 35874992
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccat--caatttgtataatcacttaatcagtcaatttgaaaagctatttca 686  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || ||  |||||||||||||||||||||| ||||||||||||| |||||||     
T  35874872 ctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataatcacttaatcggtcaatttgaaaaactatttct 35874971  T
Q  687 ttgaaaggatcacaacaatta 707  Q
    | ||||| | |||||||||||    
T  35874972 tagaaagaaccacaacaatta 35874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 864
Target Start/End: Complemental strand, 39698054 - 39697782
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||  |||||| || ||| | |||||||||| | ||||||||| |||| |||||||||| |||| ||||| |||||||||||||||||||||||||    
T  39698054 ctagactttagttctcctatcttggcataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcatt 39697955  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| |||||||||||||          || |||||||| |||||||||| ||||||| || | | |  |||||| | |||||||||||| |||| |||    
T  39697954 gaaagaatcacaacaattatttcttt---tttacataaaccattcgttttcgcctttcccacaacggataagtgacaaatccaaatgacactgtta-gta 39697859  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaat 864  Q
    ||||  || ||||||||||||| ||||    ||||| ||||| |||||| ||  |||||||||||||| ||||||||    
T  39697858 aattctacctctctttcacttattttttttgtatttcgtttcatgtttagaaactcttctgattctgattttttaat 39697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 880
Target Start/End: Complemental strand, 43926439 - 43926152
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| ||||||||||| || | ||||||  ||| ||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||    
T  43926439 ctagactctagttctactttttgtatataaatcggatcctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagctatttcatt 43926340  T
Q  689 gaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggta 787  Q
    ||||| ||||||||||| |         |||| ||||||| ||||| ||| |||||| | || ||  ||||||||| | |||||| ||||| ||||  ||    
T  43926339 gaaagaatcacaacaatca--tttttttcttcgcataaaccattcgctttacccttttccacaatagaggagtgacaaatccaaacgacaccgttacata 43926242  T
Q  788 aatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||||  ||||||| |||||||||   ||| ||  |||| |||||| || ||||||||||||||| |||||| ||||  |||||||||||    
T  43926241 aatttcac--ctctttctcttaatttt-ttttaattcctttcatgtttagaacttcttctgattctgattttttagtgaaatttagctacaca 43926152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 954
Target Start/End: Original strand, 12531545 - 12531871
Alignment:
Q  627 ctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataa 726  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| |          |||||||||    
T  12531545 ctatcaaactacctccaatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaatcacaacaatcatttcttt---ttcacataa 12531641  T
Q  727 actattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttg 825  Q
    || ||| |||||||||||||| || | | |  | |||| | | |||| ||| | |||| |||||||  || ||||||||||||||||||    ||||| |    
T  12531642 accatttgttttcccctttcccacaacggataaatgacaaattcaaacgacgccgtta-gtaaattatacctctctttcacttaatttttttatatttcg 12531740  T
Q  826 tttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacac-nnnnnnntgcgtttttatcttactcgg-gcctattttaaaaat 923  Q
    |||| |||||| ||| |||||| ||||||| |||||||| ||||||||||||||||        || |||||||| ||| | || |||||||||||| |     
T  12531741 tttcatgtttagaagctcttcttattctgattttttaataaagcttagctacacacaaaaaaattgtgtttttattttattgggagcctattttaaatag 12531840  T
Q  924 agaaccgagcctcctatttcataggaacggc 954  Q
    ||| || |||||||||||||||||| |||||    
T  12531841 agagccaagcctcctatttcatagggacggc 12531871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 613 - 705
Target Start/End: Original strand, 3471572 - 3471664
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||| |||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3471572 acataaatgtgattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 3471664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 598 - 705
Target Start/End: Complemental strand, 5869427 - 5869322
Alignment:
Q  598 agttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatc 697  Q
    |||||| ||||||| ||||||||| ||| ||||||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  5869427 agttctcctttctgtacataaatt-gatactatcaaaccacca-caatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatc 5869330  T
Q  698 acaacaat 705  Q
    ||||||||    
T  5869329 acaacaat 5869322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 591 - 705
Target Start/End: Complemental strand, 18420723 - 18420609
Alignment:
Q  591 agactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattga 690  Q
    |||||| |||||| |||| || ||||||||  ||| ||||||||| ||  | |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18420723 agactctagttctcctttttgtacataaatcagatcctatcaaaccacacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattga 18420624  T
Q  691 aaggatcacaacaat 705  Q
    ||| |||||||||||    
T  18420623 aagaatcacaacaat 18420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 23567371 - 23567274
Alignment:
Q  608 tctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||| |||||||| || | ||||||||| |||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  23567371 tctgaacataaatctgctactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaat 23567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 590 - 705
Target Start/End: Complemental strand, 30915403 - 30915287
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt- 688  Q
    ||||||| | |||| ||||||||||||| || |||||||| |||||  ||  |||| ||||||||||||||||||||||||||||||||||||||||||     
T  30915403 tagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatttcatta 30915304  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  30915303 aaaagaatcacaacaat 30915287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 589 - 705
Target Start/End: Complemental strand, 43968186 - 43968070
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| ||    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  43968186 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccactcctaatttgtataatcacttaatcaatcaatttgaaaagttatttcatt 43968087  T
Q  689 gaaaggatcacaacaat 705  Q
    ||||| |||||||||||    
T  43968086 gaaagaatcacaacaat 43968070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 613 - 861
Target Start/End: Original strand, 13585271 - 13585515
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaattannnnn 712  Q
    ||||||||  ||| ||||||||| |||   |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |         
T  13585271 acataaatcagatcctatcaaaccacccctaatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatca--ttt 13585368  T
Q  713 nnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaat 811  Q
        |||| ||||||| ||||||||| |||||| | || |   ||||||||| | |||||| ||| | ||||| ||||||||||  || |||||||||||    
T  13585369 ttttcttcgcataaaccattcgttttacccttttccacaacagaggagtgacaagtccaaacgacgccgttagataaatttcac--ctttttcacttaat 13585466  T
Q  812 tttaagttattttgtttcgtgtttaaaagttcttctgattctgacttttt 861  Q
    |||   ||| ||  |||| |||||| |||||||||||||||||| |||||    
T  13585467 ttt-ttttaattcctttcatgtttagaagttcttctgattctgatttttt 13585515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 590 - 705
Target Start/End: Complemental strand, 44665161 - 44665046
Alignment:
Q  590 tagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 689  Q
    ||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  44665161 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattg 44665062  T
Q  690 aaaggatcacaacaat 705  Q
    |||| |||||||||||    
T  44665061 aaagaatcacaacaat 44665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 339 - 436
Target Start/End: Complemental strand, 3669867 - 3669769
Alignment:
Q  339 gttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  3669867 gttgggtcacgaggggagc-tagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 3669769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 589 - 705
Target Start/End: Original strand, 7858033 - 7858149
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||  |||   ||||||||||||||||||||||||||||||| |||| || ||||||    
T  7858033 ctagactctagttctcctttttgaacataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatt 7858132  T
Q  689 gaaaggatcacaacaat 705  Q
     |||| |||||||||||    
T  7858133 taaagaatcacaacaat 7858149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 613 - 705
Target Start/End: Original strand, 27074546 - 27074638
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    |||||||| |||| ||||||||| |||   |||||||||||||||||||||||||||||| |||  ||||||||||||||  |||||||||||    
T  27074546 acataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaat 27074638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 643 - 861
Target Start/End: Original strand, 1004060 - 1004272
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttg-aaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttccc 741  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||| |         | || ||||||| ||||||||| ||    
T  1004060 aatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatca-ttttttttcatcgcataaaccattcgttttacc 1004158  T
Q  742 ctttcctacgatgtaggagtgacattccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagt 841  Q
    |||| | || |   ||||||||||   |||| ||||| ||||| ||||||||||  |||||||||||||||||   ||| ||  |||| ||||||||| |    
T  1004159 cttttccacaacagaggagtgaca--acaaacgacaccgttagataaatttcac--ctctttcacttaatttt--tttaattcctttcatgtttaaaact 1004252  T
Q  842 tcttctgattctgacttttt 861  Q
    |||||||||||||| |||||    
T  1004253 tcttctgattctgatttttt 1004272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 18112118 - 18112180
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||    
T  18112118 aatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcacaacaat 18112180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 42951831 - 42951774
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcaca 700  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  42951831 aatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcaca 42951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 801 - 954
Target Start/End: Original strand, 33452916 - 33453065
Alignment:
Q  801 tttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacacacnnnnnnntgcgtttttatc 900  Q
    ||||||||||||||   |||||| ||||| |||||| |||||||||| ||| ||| |||||||||||| ||||||||| |           ||||||||     
T  33452916 tttcacttaatttttttttatttcgtttcatgtttagaagttcttctaattatgattttttaatgaagtttagctacaaaaaaaaaat---gtttttatt 33453012  T
Q  901 ttactcgggcctattttaaaaatagaaccgagcctcctatttcataggaacggc 954  Q
    |||   |||||||||||||||| ||||| || ||||||||||||||||||||||    
T  33453013 tta-aagggcctattttaaaaagagaactgaacctcctatttcataggaacggc 33453065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 40518230 - 40518153
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||| |||||||| ||||||||||||||| |||||   ||||||||||||| ||||||| || |||||||||||    
T  40518230 gggggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggca 40518153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 34835033 - 34834958
Alignment:
Q  363 gggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||| |||||||||||||||||||||||||| |||||   ||||||| ||||| ||||||| || |||||||||||    
T  34835033 gggatcatccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 34834958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 3038292 - 3038366
Alignment:
Q  364 ggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||| |||||||||||||||||||||||| |||||   |||||| |||||| ||||||| || |||||||||||    
T  3038292 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggca 3038366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 9309535 - 9309437
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccataca-agtgagagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||  ||||||| | |||||||| |||||||||||||||||||||||| | |  | ||||||| ||||| |||||||  |||||||||||||    
T  9309535 tgttgggtcactgggggagc-tcgggggaccgtccacatcgaggctagaacaaccacatactgagagagacaccacactcttacccgacaccttaaggca 9309437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 433 - 483
Target Start/End: Original strand, 35874716 - 35874766
Alignment:
Q  433 ggcaggaccggaccctggggagtgcaagagattctaccgaaccgagcctcc 483  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||| |||||    
T  35874716 ggcagggccggaccctggggagtgcaagaggttctactgaaccgaacctcc 35874766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 5916025 - 5915949
Alignment:
Q  362 ggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  5916025 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 5915949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 20995393 - 20995492
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| ||||||||| || ||||||| ||| ||| |||| ||| |||||| ||||||  ||||||| ||||| ||||||| || ||||||||||    
T  20995393 tgttgggtcacgaggggagcc-agagggaccacccatatctaggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggc 20995491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 30441266 - 30441167
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggc 435  Q
    ||||||||||| ||||||||| ||| | ||  |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || ||||||||||    
T  30441266 tgttgggtcacgaggggagccaaggtg-actgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggc 30441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 359 - 436
Target Start/End: Complemental strand, 6651655 - 6651576
Alignment:
Q  359 tagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaaggca 436  Q
    ||||||||||||||||||||||| |||||||| |  |||||   ||||||| ||||| ||||||| || |||||||||||    
T  6651655 tagggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 6651576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 360 - 433
Target Start/End: Complemental strand, 45122784 - 45122709
Alignment:
Q  360 agggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    ||||||||| |||||||||||||| ||||||||| |||||   ||||||||||||| || |||| || ||||||||    
T  45122784 agggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaag 45122709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 9507932 - 9507866
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaagtg--agagacgccacaatcttacctaacaccttaagg 434  Q
    |||||||||||||| ||||||||||| ||| |  |||||||||||| ||||||| || |||||||||    
T  9507932 tccacatcgaggcttgaacaaccatataagagatagagacgccacactcttacccaaaaccttaagg 9507866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 907 - 958
Target Start/End: Complemental strand, 39697746 - 39697695
Alignment:
Q  907 gggcctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||||||||||| | ||| || |||||||||||||||||| |||||||||    
T  39697746 gggcctattttaaatagagacccaagcctcctatttcatagggacggccctg 39697695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 3037968 - 3038006
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag 399  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  3037968 gggggaccgtccacatcgaggctagaacaaccacacaag 3038006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 642 - 684
Target Start/End: Complemental strand, 5971819 - 5971777
Alignment:
Q  642 caatttgtataatcacttaatcagtcaatttgaaaagctattt 684  Q
    |||||| ||| |||||||||||||||||||| |||||||||||    
T  5971819 caatttctatcatcacttaatcagtcaatttaaaaagctattt 5971777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 929 - 959
Target Start/End: Complemental strand, 12268402 - 12268372
Alignment:
Q  929 cgagcctcctatttcataggaacggccctgc 959  Q
    |||||||||||||||||||||||||||||||    
T  12268402 cgagcctcctatttcataggaacggccctgc 12268372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 911 - 961
Target Start/End: Complemental strand, 18420402 - 18420352
Alignment:
Q  911 ctattttaaaaatagaaccgagcctcctatttcataggaacggccctgcct 961  Q
    |||||||||||| ||| ||||||||||||||||| ||| ||| ||||||||    
T  18420402 ctattttaaaaagagagccgagcctcctatttcacagggacgaccctgcct 18420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 610 - 684
Target Start/End: Original strand, 33452760 - 33452834
Alignment:
Q  610 tggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctattt 684  Q
    ||||||||||| | ||| |||||||| |||  |||||| |||||||||| ||| | ||||||||||||| |||||    
T  33452760 tggacataaatcttatggtatcaaaccacctccaatttatataatcactcaattaatcaatttgaaaagttattt 33452834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 41129157 - 41129073
Alignment:
Q  350 aggggagcctagggggaccatccacatcgaggctagaacaaccatacaagt--gagagacgccacaatcttacctaacaccttaag 433  Q
    |||||||||| |||||||| |||||||||||| | ||||||||| ||||||  ||||||| ||||| || |||| || ||||||||    
T  41129157 aggggagcct-gggggaccgtccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaag 41129073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 781 - 814
Target Start/End: Complemental strand, 3574953 - 3574920
Alignment:
Q  781 ttaggtaaatttcacatctctttcacttaatttt 814  Q
    ||||||||||||||| ||||||||||||||||||    
T  3574953 ttaggtaaatttcacttctctttcacttaatttt 3574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 434
Target Start/End: Complemental strand, 3670242 - 3670144
Alignment:
Q  336 cttgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaacaccttaag 433  Q
    |||||| |||||| |||||||| |||||  ||| |||||||||||||||||||||||  |||||   ||||||| ||||| ||||||| || ||||||||    
T  3670242 cttgttaggtcacgaggggagc-taggga-accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 3670145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 5420801 - 5420733
Alignment:
Q  370 tccacatcgaggctagaacaaccatacaagtga--gagacgccacaatcttacctaacaccttaaggca 436  Q
    |||||||||||||| ||||||||| ||||||||  |||||| |||| ||||||  || |||||||||||    
T  5420801 tccacatcgaggcttgaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggca 5420733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 6876861 - 6876898
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaa 398  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  6876861 gggggaccgtccacatcgaggctagaacaaccacacaa 6876898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 9309160 - 9309108
Alignment:
Q  340 ttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaacca 393  Q
    |||||||||  ||||||| | |||||||| ||||||||||||||||||||||||    
T  9309160 ttgggtcactgggggagc-tcgggggaccgtccacatcgaggctagaacaacca 9309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 793 - 878
Target Start/End: Complemental strand, 12268838 - 12268754
Alignment:
Q  793 cacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctaca 878  Q
    |||||||||||| |||||| ||   |||||| ||||| ||||||  |||| |||||||| ||| |||||||||||||||| |||||    
T  12268838 cacatctctttcgcttaatatttt-ttatttcgtttcatgtttagtagttattctgattatgattttttaatgaagcttatctaca 12268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 958
Target Start/End: Original strand, 13585555 - 13585620
Alignment:
Q  894 ttttatcttactcggg-cctattttaaaaatagaaccgagcctcctatttcataggaacggccctg 958  Q
    |||||| ||||| ||| ||||||||||||| |||  |||||||||||||||| ||| |||||||||    
T  13585555 ttttattttactaggggcctattttaaaaagagagtcgagcctcctatttcacagggacggccctg 13585620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 589 - 702
Target Start/End: Original strand, 16658 - 16771
Alignment:
Q  589 ctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 688  Q
    |||||||| |||||| |||| || ||||||||  ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  16658 ctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcatt 16757  T
Q  689 gaaaggatcacaac 702  Q
    ||||| ||||||||    
T  16758 gaaagaatcacaac 16771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 605 - 707
Target Start/End: Complemental strand, 8495 - 8393
Alignment:
Q  605 ctttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaa 704  Q
    |||||||||||||||  | |||||||||||| |||   |||||||||||||| |||||||||||||||  ||| ||||||||||||||| ||||||| ||    
T  8495 ctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcattgaaagaatcacaaaaa 8396  T
Q  705 tta 707  Q
    |||    
T  8395 tta 8393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 787 - 880
Target Start/End: Complemental strand, 8336 - 8248
Alignment:
Q  787 aaatttcacatctctttcacttaatttta-agttattttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctacaca 880  Q
    ||||||||| |||||||| |||||||||  | |||||| ||||| ||||| ||||||||||||||      ||||||||||||||||||||||||    
T  8336 aaatttcacctctctttcgcttaattttttatttatttcgtttcatgtttgaaagttcttctgat------tttttaatgaagcttagctacaca 8248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 17194 - 17132
Alignment:
Q  643 aatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  17194 aatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaatcacaacaat 17132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 666 - 880
Target Start/End: Original strand, 1086 - 1299
Alignment:
Q  666 tcaatttgaaaagctatttcattgaaaggatcacaacaattannnnnnnnncttcacataaactattcgttttcccctttcctacgatgtaggagtgaca 765  Q
    |||||||| ||||||||||||||||||| ||||||||||| |         |||| ||||||| ||||||||| |||||| | || |  |||||||||||    
T  1086 tcaatttggaaagctatttcattgaaagaatcacaacaatcattttttt--cttcgcataaaccattcgttttacccttttccacaacataggagtgaca 1183  T
Q  766 t-tccaaatgacacagttaggtaaatttcacatctctttcacttaattttaagttattttgtttcgtgtttaaaagttcttctgattctga--cttttta 862  Q
      |||||| ||||| ||||| ||||||||||  |||||||| ||||||||   ||| ||  |||| |||||| || |||||||||||||||   ||||||    
T  1184 aatccaaacgacaccgttagataaatttcac--ctctttcatttaatttttttttaattcctttcatgtttagaacttcttctgattctgatttttttta 1281  T
Q  863 atgaagcttagctacaca 880  Q
    |||||  |||||||||||    
T  1282 atgaaatttagctacaca 1299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 613 - 705
Target Start/End: Complemental strand, 46265 - 46173
Alignment:
Q  613 acataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaaggatcacaacaat 705  Q
    ||||| || |||| ||||||||| |||   |||||| |||||||||||||||||||||||| ||  ||||||||||||||  |||||||||||    
T  46265 acatatatctgatcctatcaaaccacccataatttggataatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaat 46173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 820 - 952
Target Start/End: Original strand, 99092 - 99226
Alignment:
Q  820 attttgtttcgtgtttaaaagttcttctgattctgactttttaatgaagcttagctac-acacnnnnnnntgcgtttttatcttact-cgggcctatttt 917  Q
    |||| ||||| |||||| |||||||||||||||||| ||||||||||||  ||||||| | |        ||| ||||||| |||||  |||||||||||    
T  99092 atttcgtttcatgtttagaagttcttctgattctgattttttaatgaaggctagctacaaaaaaaaaaattgcatttttattttactgagggcctatttt 99191  T
Q  918 aaaaatagaaccgagcctcctatttcataggaacg 952  Q
    ||||| |||   |||||||||||||||||||||||    
T  99192 aaaaagagatttgagcctcctatttcataggaacg 99226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 393
Target Start/End: Original strand, 1660 - 1714
Alignment:
Q  338 tgttgggtcacaaggggagcctagggggaccatccacatcgaggctagaacaacca 393  Q
    ||||||||||| |||||||| |||||||||   |||||||||||||||||||||||    
T  1660 tgttgggtcacgaggggagc-tagggggactgcccacatcgaggctagaacaacca 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 146 - 211
Alignment:
Q  361 gggggaccatccacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaa 424  Q
    |||||||| ||||||||||||||||||||||||  ||||   ||||||| ||||| ||||||||||    
T  146 gggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaa 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University