View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2885-Insertion-15 (Length: 593)
Name: NF2885-Insertion-15
Description: NF2885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2885-Insertion-15 |
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Alignment Details
Target: chr1 (Bit Score: 459; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 7 - 571
Target Start/End: Original strand, 1112201 - 1112792
Alignment:
| Q |
7 |
atctaatacagcattatttgtgtttgtatcataatgtgcttattttgttgctcacattttccttgttatcatgactagtagaagagtgactggtcctaca |
106 |
Q |
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| T |
1112201 |
atctaatacatcattatttgtgtttgtatcataatgtgcttattttgttgctcacattttccttgttatcatgactaatagaagagtgactggtcctaca |
1112300 |
T |
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| Q |
107 |
agaagatcaactaaaggaggttggacagagaaggaggtaaggatcaacaaaccattcaattcttaaagttacttgtttaccaagaaactattcaaccaaa |
206 |
Q |
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| T |
1112301 |
agaagatcaactaaaggaggttggacagagaaggaggtaaggatcaacaaaccattcaattcttaaagttacttgtttaccaagaaactattcaaccaaa |
1112400 |
T |
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| Q |
207 |
gagaatttcttgccaataacatcattatctatacagagtcatgaatctcacttttcttgttttcttatttacaggataaacttttgattgctgctgtaaa |
306 |
Q |
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| T |
1112401 |
gagaatttcttgccaataacatcattatctatacagagtcatgaatctcacttttcttgttttcttatttacaggataaacttttgattgatgctgtaaa |
1112500 |
T |
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| Q |
307 |
aaagtataatggaaaaagttggaaaaagataggtatggtatagtcagatttggaaaaacttttcacatttgtttcttgtaggtacaactt---------- |
396 |
Q |
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| T |
1112501 |
aaagtataatgg-aaaagttggaaaaagataggtatggtatagtcagatttggaaaaacttttcacatttgtttctagtaggaacaactttaattctgag |
1112599 |
T |
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| Q |
397 |
--------tttgctaccaaaatagtcagatttggatttactgcagtcacaaattccacgcattcacacggttagcgtatgtattagtatcgttaaatcaa |
488 |
Q |
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| T |
1112600 |
tgttgatatttgctaccaaaatagtcagatttggatttactgcagtcacaaattccacgcgttcacacggttagcgtatgtattagtatcgttaaatcaa |
1112699 |
T |
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| Q |
489 |
gattggaaggtccaaatttcaagatcgatgttttagaat----------tcaaaatttgcttacgttttgcacctttcgatttcgatccaaca |
571 |
Q |
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| T |
1112700 |
gattggaaggtccaaatttcatgatcgatgttttagaattcaaaaaatatcaaaatttgcttacgttttgcacctttcgatctcgatccaaca |
1112792 |
T |
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