View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2885-Insertion-16 (Length: 481)

Name: NF2885-Insertion-16
Description: NF2885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2885-Insertion-16
NF2885-Insertion-16
[»] chr1 (83 HSPs)
chr1 (148-481)||(48417480-48417813)
chr1 (56-130)||(50503191-50503265)
chr1 (56-189)||(34953890-34954028)
chr1 (56-130)||(33289033-33289107)
chr1 (10-67)||(48417810-48417867)
chr1 (56-128)||(14365425-14365497)
chr1 (69-177)||(33765808-33765921)
chr1 (62-188)||(48083499-48083630)
chr1 (56-129)||(43728194-43728267)
chr1 (69-130)||(47969506-47969567)
chr1 (56-127)||(14891799-14891870)
chr1 (69-176)||(43738612-43738724)
chr1 (61-127)||(1597202-1597268)
chr1 (61-171)||(3549792-3549907)
chr1 (56-133)||(10832049-10832126)
chr1 (61-130)||(44349943-44350012)
chr1 (62-122)||(21321384-21321444)
chr1 (86-130)||(39362847-39362891)
chr1 (61-125)||(42761466-42761530)
chr1 (56-186)||(3013618-3013753)
chr1 (56-130)||(6508405-6508479)
chr1 (56-130)||(8338683-8338757)
chr1 (78-188)||(9590739-9590854)
chr1 (56-130)||(31998247-31998321)
chr1 (61-130)||(2492534-2492603)
chr1 (56-117)||(17342355-17342416)
chr1 (137-189)||(23398413-23398466)
chr1 (62-122)||(2352961-2353021)
chr1 (78-130)||(8465956-8466008)
chr1 (62-130)||(11324491-11324559)
chr1 (62-130)||(11482512-11482580)
chr1 (68-108)||(13043371-13043411)
chr1 (56-124)||(26344228-26344296)
chr1 (94-130)||(45639555-45639591)
chr1 (69-189)||(23575311-23575437)
chr1 (79-130)||(26674244-26674295)
chr1 (77-124)||(40988391-40988438)
chr1 (62-188)||(41161479-41161610)
chr1 (69-120)||(50755245-50755296)
chr1 (56-130)||(33939355-33939429)
chr1 (56-130)||(45115228-45115302)
chr1 (69-130)||(7461326-7461387)
chr1 (62-127)||(36486553-36486618)
chr1 (61-118)||(41970858-41970915)
chr1 (56-185)||(50550127-50550261)
chr1 (70-130)||(37248146-37248206)
chr1 (137-188)||(45115263-45115315)
chr1 (56-107)||(3906842-3906893)
chr1 (69-176)||(5595427-5595539)
chr1 (56-115)||(13043413-13043472)
chr1 (137-183)||(24981934-24981981)
chr1 (56-127)||(45010846-45010917)
chr1 (79-130)||(50154337-50154388)
chr1 (80-130)||(9002787-9002837)
chr1 (56-122)||(13877051-13877117)
chr1 (56-130)||(14967283-14967357)
chr1 (56-122)||(18607151-18607217)
chr1 (56-122)||(25547479-25547545)
chr1 (76-130)||(31325838-31325892)
chr1 (61-103)||(44673899-44673941)
chr1 (56-125)||(6758554-6758623)
chr1 (137-185)||(8338673-8338722)
chr1 (61-130)||(8465984-8466053)
chr1 (68-109)||(13048677-13048718)
chr1 (68-109)||(13053674-13053715)
chr1 (62-135)||(21444218-21444291)
chr1 (62-127)||(24115765-24115830)
chr1 (61-130)||(31699000-31699069)
chr1 (61-130)||(31889101-31889170)
chr1 (69-130)||(35544591-35544652)
chr1 (56-109)||(38834619-38834672)
chr1 (80-133)||(39617340-39617393)
chr1 (56-109)||(39708187-39708240)
chr1 (86-130)||(8397048-8397092)
chr1 (61-121)||(8455066-8455126)
chr1 (137-176)||(14967318-14967358)
chr1 (70-130)||(20621288-20621348)
chr1 (62-110)||(24115829-24115877)
chr1 (62-122)||(31008273-31008333)
chr1 (137-188)||(33939390-33939442)
chr1 (63-127)||(37589612-37589676)
chr1 (61-105)||(43728269-43728313)
chr1 (137-188)||(46412698-46412750)
[»] chr5 (48 HSPs)
chr5 (56-188)||(14772543-14772678)
chr5 (56-188)||(71267-71406)
chr5 (61-130)||(43482830-43482899)
chr5 (56-130)||(694214-694288)
chr5 (70-176)||(3100412-3100523)
chr5 (69-130)||(38370445-38370506)
chr5 (74-130)||(22650914-22650970)
chr5 (56-130)||(18033413-18033487)
chr5 (62-130)||(11795750-11795818)
chr5 (62-130)||(33075079-33075147)
chr5 (61-128)||(5984043-5984110)
chr5 (56-188)||(10437646-10437782)
chr5 (62-124)||(25773307-25773369)
chr5 (69-122)||(780724-780777)
chr5 (62-188)||(25408538-25408669)
chr5 (61-122)||(30371399-30371460)
chr5 (69-130)||(31706017-31706078)
chr5 (61-130)||(35032328-35032397)
chr5 (59-188)||(8681696-8681830)
chr5 (40-130)||(31691317-31691405)
chr5 (56-110)||(4082816-4082870)
chr5 (56-130)||(14153377-14153451)
chr5 (56-130)||(17967373-17967447)
chr5 (56-130)||(26141763-26141837)
chr5 (56-109)||(32398082-32398135)
chr5 (56-125)||(36895045-36895114)
chr5 (137-188)||(43117381-43117433)
chr5 (138-188)||(15549419-15549470)
chr5 (67-122)||(17153442-17153497)
chr5 (56-99)||(29177800-29177843)
chr5 (61-116)||(37067837-37067892)
chr5 (80-122)||(13157365-13157407)
chr5 (80-130)||(35969073-35969123)
chr5 (86-127)||(10463006-10463047)
chr5 (56-128)||(19868982-19869055)
chr5 (61-102)||(26045278-26045319)
chr5 (59-92)||(26432584-26432617)
chr5 (61-130)||(31154688-31154757)
chr5 (62-103)||(33652494-33652535)
chr5 (56-130)||(33652620-33652698)
chr5 (69-130)||(41005726-41005787)
chr5 (82-122)||(4297231-4297271)
chr5 (138-185)||(11795734-11795782)
chr5 (137-188)||(26141750-26141802)
chr5 (62-122)||(26300125-26300185)
chr5 (94-130)||(31963577-31963613)
chr5 (98-162)||(36136267-36136330)
chr5 (62-122)||(37944616-37944676)
[»] chr2 (64 HSPs)
chr2 (56-176)||(1961317-1961442)
chr2 (56-188)||(15119772-15119909)
chr2 (56-183)||(7079370-7079502)
chr2 (56-130)||(2050098-2050172)
chr2 (61-130)||(10996259-10996328)
chr2 (56-188)||(26003430-26003567)
chr2 (68-188)||(38465784-38465909)
chr2 (61-130)||(15859609-15859678)
chr2 (56-120)||(11342038-11342102)
chr2 (138-190)||(11726489-11726541)
chr2 (61-124)||(596040-596103)
chr2 (68-171)||(15916745-15916852)
chr2 (61-130)||(32630419-32630488)
chr2 (137-189)||(13994283-13994335)
chr2 (62-130)||(37195066-37195134)
chr2 (61-124)||(19951509-19951572)
chr2 (56-130)||(32460749-32460824)
chr2 (61-130)||(8383198-8383267)
chr2 (79-188)||(23377973-23378087)
chr2 (61-130)||(36547354-36547423)
chr2 (137-189)||(13988385-13988437)
chr2 (62-122)||(20504257-20504317)
chr2 (56-188)||(42530500-42530637)
chr2 (56-119)||(15900288-15900351)
chr2 (56-130)||(8740527-8740601)
chr2 (79-189)||(11726526-11726641)
chr2 (80-130)||(14393178-14393228)
chr2 (56-130)||(26234082-26234156)
chr2 (77-127)||(32218637-32218687)
chr2 (80-130)||(37396236-37396286)
chr2 (56-130)||(38618453-38618527)
chr2 (61-119)||(40187312-40187370)
chr2 (137-189)||(8510598-8510651)
chr2 (80-124)||(5762533-5762577)
chr2 (94-130)||(10602352-10602388)
chr2 (61-130)||(11153216-11153287)
chr2 (61-117)||(39939832-39939888)
chr2 (69-124)||(15861723-15861778)
chr2 (138-188)||(27331853-27331904)
chr2 (63-130)||(37182831-37182898)
chr2 (56-130)||(40204448-40204525)
chr2 (56-127)||(41805282-41805353)
chr2 (69-107)||(4032689-4032727)
chr2 (56-130)||(11093588-11093661)
chr2 (69-127)||(27497328-27497386)
chr2 (74-120)||(31175107-31175153)
chr2 (56-130)||(32143464-32143538)
chr2 (80-130)||(41823773-41823823)
chr2 (79-113)||(42955108-42955142)
chr2 (69-130)||(10041563-10041624)
chr2 (61-122)||(13304484-13304545)
chr2 (137-189)||(13882776-13882829)
chr2 (137-189)||(14022901-14022954)
chr2 (138-190)||(14308740-14308793)
chr2 (61-114)||(23378016-23378069)
chr2 (79-176)||(31024178-31024280)
chr2 (61-130)||(43732151-43732220)
chr2 (137-188)||(15119870-15119922)
chr2 (62-130)||(19612955-19613023)
chr2 (62-130)||(19950131-19950199)
chr2 (137-188)||(21183420-21183472)
chr2 (137-188)||(26234117-26234169)
chr2 (63-125)||(35438633-35438692)
chr2 (79-119)||(43701423-43701463)
[»] chr3 (65 HSPs)
chr3 (56-189)||(52215888-52216026)
chr3 (61-176)||(37897695-37897815)
chr3 (56-189)||(12744909-12745047)
chr3 (56-130)||(29389335-29389409)
chr3 (61-130)||(9492689-9492758)
chr3 (56-188)||(10872667-10872804)
chr3 (62-130)||(35987489-35987557)
chr3 (56-188)||(45736682-45736819)
chr3 (69-130)||(50466834-50466894)
chr3 (69-130)||(14756429-14756490)
chr3 (61-122)||(51060676-51060737)
chr3 (79-130)||(26121570-26121621)
chr3 (56-130)||(331856-331930)
chr3 (80-130)||(4181989-4182039)
chr3 (80-130)||(26244412-26244462)
chr3 (56-130)||(29222861-29222934)
chr3 (63-112)||(31474749-31474798)
chr3 (137-188)||(331891-331943)
chr3 (62-122)||(32758980-32759040)
chr3 (74-122)||(35237704-35237752)
chr3 (73-130)||(37807568-37807627)
chr3 (56-127)||(43177096-43177170)
chr3 (61-183)||(24075447-24075572)
chr3 (79-130)||(26243710-26243761)
chr3 (63-122)||(29512197-29512256)
chr3 (61-124)||(47334655-47334718)
chr3 (140-189)||(7882275-7882325)
chr3 (56-122)||(24694294-24694360)
chr3 (56-130)||(38677573-38677647)
chr3 (66-108)||(47650522-47650564)
chr3 (61-130)||(3074836-3074905)
chr3 (56-125)||(3648762-3648831)
chr3 (61-130)||(4821439-4821508)
chr3 (69-122)||(34327529-34327582)
chr3 (61-130)||(51253728-51253797)
chr3 (137-188)||(8504845-8504897)
chr3 (68-188)||(22496946-22497071)
chr3 (61-189)||(27224574-27224707)
chr3 (69-130)||(43599156-43599221)
chr3 (75-127)||(49412312-49412364)
chr3 (137-189)||(54595883-54595935)
chr3 (63-130)||(4980331-4980398)
chr3 (56-127)||(41743651-41743722)
chr3 (137-188)||(42930110-42930160)
chr3 (59-97)||(1752348-1752386)
chr3 (56-130)||(8504858-8504932)
chr3 (139-188)||(9170107-9170157)
chr3 (61-119)||(20619004-20619062)
chr3 (137-190)||(30519691-30519745)
chr3 (137-190)||(38677558-38677612)
chr3 (64-130)||(52866475-52866541)
chr3 (97-176)||(54783384-54783468)
chr3 (141-189)||(7829140-7829189)
chr3 (62-103)||(7981230-7981271)
chr3 (62-107)||(38455246-38455291)
chr3 (137-185)||(40639802-40639851)
chr3 (137-189)||(48191709-48191762)
chr3 (61-122)||(50745032-50745093)
chr3 (81-126)||(53638424-53638469)
chr3 (79-176)||(54595797-54595899)
chr3 (62-130)||(8439316-8439384)
chr3 (62-130)||(12047303-12047370)
chr3 (138-185)||(12744899-12744947)
chr3 (69-97)||(28939510-28939538)
chr3 (70-130)||(53683841-53683901)
[»] chr7 (66 HSPs)
chr7 (56-127)||(26477222-26477293)
chr7 (56-127)||(26553662-26553733)
chr7 (79-188)||(10095714-10095828)
chr7 (61-182)||(3882820-3882949)
chr7 (77-130)||(21586872-21586925)
chr7 (56-129)||(30138847-30138920)
chr7 (56-125)||(31813419-31813488)
chr7 (62-130)||(46495426-46495494)
chr7 (56-157)||(6847284-6847389)
chr7 (68-130)||(26385683-26385745)
chr7 (68-130)||(26904801-26904863)
chr7 (56-188)||(6455557-6455694)
chr7 (61-114)||(9930401-9930454)
chr7 (56-188)||(2943207-2943344)
chr7 (56-188)||(43103067-43103204)
chr7 (77-123)||(45985589-45985635)
chr7 (77-123)||(45989949-45989995)
chr7 (68-121)||(4089856-4089909)
chr7 (137-189)||(5950287-5950340)
chr7 (69-130)||(32549879-32549940)
chr7 (61-130)||(45531962-45532031)
chr7 (87-171)||(21096199-21096288)
chr7 (137-188)||(25245236-25245288)
chr7 (62-122)||(27554511-27554571)
chr7 (56-127)||(41803730-41803801)
chr7 (56-188)||(3882560-3882697)
chr7 (56-130)||(24280879-24280953)
chr7 (56-130)||(29205320-29205394)
chr7 (61-107)||(32490602-32490648)
chr7 (61-106)||(21886480-21886525)
chr7 (85-130)||(35238976-35239021)
chr7 (57-130)||(39960296-39960369)
chr7 (62-107)||(44416613-44416658)
chr7 (137-188)||(6455544-6455596)
chr7 (62-122)||(22106681-22106741)
chr7 (58-118)||(31663046-31663106)
chr7 (59-107)||(35641489-35641537)
chr7 (62-122)||(40529610-40529670)
chr7 (63-127)||(41106099-41106163)
chr7 (56-127)||(8447778-8447849)
chr7 (79-130)||(23797406-23797457)
chr7 (61-107)||(2533953-2533999)
chr7 (96-130)||(18534916-18534950)
chr7 (56-130)||(26385633-26385707)
chr7 (80-130)||(27942357-27942407)
chr7 (56-114)||(44819672-44819730)
chr7 (62-119)||(716303-716360)
chr7 (79-124)||(5084494-5084539)
chr7 (56-113)||(7716290-7716346)
chr7 (69-130)||(9555281-9555342)
chr7 (77-130)||(18113264-18113317)
chr7 (62-111)||(22281457-22281506)
chr7 (62-103)||(35216490-35216531)
chr7 (62-115)||(39013089-39013142)
chr7 (94-131)||(39136612-39136649)
chr7 (61-122)||(43130246-43130307)
chr7 (62-122)||(1706899-1706959)
chr7 (137-188)||(8447810-8447862)
chr7 (74-110)||(18654624-18654660)
chr7 (137-176)||(23818431-23818471)
chr7 (61-105)||(24353813-24353857)
chr7 (62-122)||(24936599-24936659)
chr7 (62-122)||(29498797-29498857)
chr7 (62-122)||(34703509-34703569)
chr7 (62-122)||(40416972-40417032)
chr7 (137-188)||(41404010-41404062)
[»] chr4 (87 HSPs)
chr4 (61-181)||(40952350-40952475)
chr4 (62-131)||(3511723-3511792)
chr4 (69-130)||(4708594-4708655)
chr4 (69-130)||(10572779-10572840)
chr4 (69-169)||(19878300-19878405)
chr4 (61-188)||(4406236-4406368)
chr4 (56-130)||(48603572-48603646)
chr4 (61-130)||(5816552-5816621)
chr4 (69-122)||(18423913-18423966)
chr4 (61-122)||(21142156-21142217)
chr4 (71-176)||(18626716-18626824)
chr4 (61-185)||(36786163-36786292)
chr4 (61-124)||(7740554-7740617)
chr4 (56-130)||(32599488-32599562)
chr4 (68-130)||(38298110-38298172)
chr4 (65-130)||(48414914-48414979)
chr4 (62-130)||(22493590-22493658)
chr4 (56-128)||(24798135-24798207)
chr4 (77-189)||(40814698-40814815)
chr4 (70-130)||(49231300-49231360)
chr4 (74-130)||(50686063-50686119)
chr4 (79-130)||(4484105-4484156)
chr4 (62-121)||(7215547-7215606)
chr4 (69-127)||(23071427-23071485)
chr4 (61-188)||(33693982-33694114)
chr4 (59-117)||(48995567-48995625)
chr4 (69-130)||(55416321-55416380)
chr4 (61-130)||(16170923-16170992)
chr4 (61-130)||(21113050-21113119)
chr4 (91-169)||(23003976-23004059)
chr4 (56-193)||(53176298-53176440)
chr4 (62-188)||(54106470-54106601)
chr4 (61-130)||(21649391-21649462)
chr4 (70-122)||(24448687-24448739)
chr4 (56-124)||(35151725-35151793)
chr4 (68-188)||(39533776-39533901)
chr4 (62-130)||(44239842-44239910)
chr4 (56-119)||(51829180-51829244)
chr4 (79-130)||(8826923-8826974)
chr4 (56-130)||(10308243-10308322)
chr4 (56-123)||(41346475-41346542)
chr4 (56-122)||(12070059-12070125)
chr4 (56-130)||(16468262-16468336)
chr4 (137-186)||(23568473-23568523)
chr4 (61-123)||(35425265-35425327)
chr4 (56-130)||(36072578-36072652)
chr4 (56-110)||(38539486-38539540)
chr4 (61-130)||(46803420-46803490)
chr4 (56-130)||(49481888-49481962)
chr4 (56-101)||(16203427-16203472)
chr4 (70-127)||(24133620-24133677)
chr4 (61-122)||(40575905-40575966)
chr4 (81-122)||(40881493-40881534)
chr4 (69-122)||(54931840-54931893)
chr4 (137-188)||(14450952-14451004)
chr4 (56-112)||(19597009-19597065)
chr4 (56-128)||(25138691-25138763)
chr4 (76-128)||(30035209-30035261)
chr4 (137-188)||(54713093-54713145)
chr4 (62-125)||(4370414-4370477)
chr4 (56-127)||(8826873-8826944)
chr4 (61-112)||(19595430-19595481)
chr4 (79-130)||(51232302-51232353)
chr4 (56-110)||(3094275-3094329)
chr4 (56-114)||(6462786-6462844)
chr4 (56-130)||(14450965-14451039)
chr4 (80-130)||(37175464-37175514)
chr4 (61-122)||(1829613-1829674)
chr4 (62-107)||(3504091-3504136)
chr4 (137-185)||(19878145-19878194)
chr4 (62-188)||(21884013-21884145)
chr4 (79-128)||(26920732-26920781)
chr4 (61-122)||(27537069-27537130)
chr4 (62-119)||(33558866-33558923)
chr4 (74-127)||(41654561-41654614)
chr4 (61-130)||(47397893-47397962)
chr4 (62-107)||(52674830-52674875)
chr4 (62-107)||(54508183-54508228)
chr4 (62-188)||(56328444-56328576)
chr4 (62-122)||(5418581-5418641)
chr4 (56-112)||(18423968-18424024)
chr4 (56-112)||(26863106-26863162)
chr4 (138-189)||(36786144-36786196)
chr4 (98-130)||(39235195-39235227)
chr4 (137-188)||(47308109-47308161)
chr4 (74-130)||(52256800-52256856)
chr4 (137-189)||(55935982-55936034)
[»] scaffold0036 (1 HSPs)
scaffold0036 (65-171)||(89610-89721)
[»] chr8 (50 HSPs)
chr8 (56-130)||(10117028-10117102)
chr8 (57-130)||(18603467-18603540)
chr8 (56-125)||(45045440-45045509)
chr8 (56-188)||(10934611-10934748)
chr8 (69-130)||(3225801-3225862)
chr8 (69-126)||(9015878-9015935)
chr8 (62-130)||(23575023-23575091)
chr8 (61-127)||(25267988-25268053)
chr8 (61-130)||(2805871-2805940)
chr8 (56-130)||(7258643-7258717)
chr8 (56-130)||(41753816-41753890)
chr8 (79-188)||(24287780-24287894)
chr8 (56-176)||(5888343-5888468)
chr8 (61-190)||(13080082-13080215)
chr8 (70-122)||(35874487-35874539)
chr8 (61-181)||(34580574-34580699)
chr8 (56-130)||(23627674-23627748)
chr8 (56-130)||(27518373-27518447)
chr8 (56-130)||(36058829-36058902)
chr8 (79-124)||(467980-468025)
chr8 (61-130)||(24017731-24017800)
chr8 (61-130)||(33385229-33385298)
chr8 (56-188)||(7484626-7484762)
chr8 (74-122)||(17923731-17923779)
chr8 (56-127)||(2382647-2382718)
chr8 (56-127)||(13496496-13496567)
chr8 (79-130)||(36916614-36916665)
chr8 (61-128)||(40640338-40640405)
chr8 (56-106)||(3444630-3444680)
chr8 (56-130)||(6614743-6614817)
chr8 (56-130)||(13290043-13290117)
chr8 (80-130)||(29916189-29916239)
chr8 (56-130)||(33070223-33070297)
chr8 (138-190)||(10117064-10117117)
chr8 (56-109)||(10679140-10679193)
chr8 (61-130)||(11335625-11335694)
chr8 (69-122)||(13211260-13211313)
chr8 (61-110)||(20269777-20269826)
chr8 (61-110)||(21056406-21056455)
chr8 (137-189)||(27518408-27518461)
chr8 (137-188)||(1662670-1662722)
chr8 (79-127)||(2296535-2296583)
chr8 (68-112)||(7428968-7429012)
chr8 (137-189)||(7484612-7484664)
chr8 (62-122)||(9056087-9056147)
chr8 (62-122)||(9808438-9808498)
chr8 (137-188)||(11295659-11295711)
chr8 (137-188)||(13496528-13496580)
chr8 (137-192)||(33070258-33070314)
chr8 (56-112)||(37716150-37716206)
[»] chr6 (50 HSPs)
chr6 (56-122)||(11746294-11746360)
chr6 (56-130)||(12383647-12383721)
chr6 (56-130)||(20704081-20704155)
chr6 (63-130)||(17214253-17214320)
chr6 (68-130)||(2827579-2827641)
chr6 (56-130)||(13281542-13281616)
chr6 (56-171)||(13506842-13506961)
chr6 (62-191)||(8145940-8146075)
chr6 (63-129)||(6263365-6263432)
chr6 (56-127)||(11637178-11637249)
chr6 (61-176)||(14218204-14218324)
chr6 (57-127)||(3102148-3102217)
chr6 (56-122)||(8449642-8449708)
chr6 (56-122)||(8458446-8458512)
chr6 (56-171)||(12218457-12218579)
chr6 (68-188)||(18886303-18886428)
chr6 (56-127)||(28555008-28555079)
chr6 (56-130)||(31398284-31398358)
chr6 (61-130)||(3199776-3199845)
chr6 (69-130)||(5571579-5571640)
chr6 (62-107)||(13277103-13277148)
chr6 (61-130)||(16465564-16465633)
chr6 (69-130)||(31158901-31158961)
chr6 (137-181)||(14031672-14031716)
chr6 (137-189)||(15517085-15517137)
chr6 (62-122)||(21506529-21506589)
chr6 (137-188)||(26527185-26527237)
chr6 (137-192)||(31398319-31398375)
chr6 (61-109)||(31761282-31761330)
chr6 (137-189)||(34379730-34379782)
chr6 (62-125)||(7158270-7158333)
chr6 (80-127)||(10258365-10258412)
chr6 (56-127)||(12383848-12383919)
chr6 (137-183)||(26527283-26527330)
chr6 (56-127)||(34170086-34170157)
chr6 (56-130)||(6032974-6033048)
chr6 (56-102)||(6894822-6894868)
chr6 (80-130)||(10644296-10644346)
chr6 (56-130)||(18097068-18097142)
chr6 (56-130)||(30916962-30917036)
chr6 (56-130)||(32254879-32254953)
chr6 (137-189)||(6560750-6560803)
chr6 (64-125)||(7718400-7718461)
chr6 (69-122)||(31714601-31714654)
chr6 (69-130)||(33053786-33053847)
chr6 (79-176)||(34379766-34379868)
chr6 (62-130)||(6560715-6560783)
chr6 (137-188)||(8146042-8146094)
chr6 (62-122)||(30460679-30460739)
chr6 (137-188)||(32254914-32254966)
[»] scaffold0009 (3 HSPs)
scaffold0009 (61-185)||(145966-146095)
scaffold0009 (61-122)||(216286-216347)
scaffold0009 (56-130)||(7715-7789)
[»] scaffold0149 (1 HSPs)
scaffold0149 (62-187)||(24620-24750)
[»] scaffold0113 (1 HSPs)
scaffold0113 (62-126)||(40515-40579)
[»] scaffold0341 (2 HSPs)
scaffold0341 (56-130)||(2428-2502)
scaffold0341 (56-130)||(10083-10157)
[»] scaffold0181 (1 HSPs)
scaffold0181 (61-131)||(10624-10694)
[»] scaffold0020 (1 HSPs)
scaffold0020 (56-130)||(139304-139378)
[»] scaffold0631 (1 HSPs)
scaffold0631 (62-119)||(4361-4418)
[»] scaffold1476 (1 HSPs)
scaffold1476 (81-124)||(693-735)
[»] scaffold0470 (1 HSPs)
scaffold0470 (56-130)||(4029-4103)
[»] scaffold0026 (1 HSPs)
scaffold0026 (61-107)||(88935-88981)
[»] scaffold0635 (1 HSPs)
scaffold0635 (69-130)||(5446-5507)
[»] scaffold0001 (1 HSPs)
scaffold0001 (70-126)||(438220-438276)


Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 148 - 481
Target Start/End: Complemental strand, 48417813 - 48417480
Alignment:
Q  148 taaaatgttatttttgcttataattgtgagcggagggtgtacaaaccattagatttaaattttattctcttaattaaattgtgtaattctattttattct 247  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  48417813 taaaatgttatttttgcttataattgtgagcggagggtgttcaaaccattagatttaaattttattctcttaattaaattgtgtaattctattttattta 48417714  T
Q  248 ttttgcagaactcgcgttatgcagataatgctgaagaatattaagtgtctgttcatgcaatatgtagttgtgtataccatgaagcatatcactgttgcat 347  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48417713 ttttgtagaactcgcgttatgcagataatgctgaagaatattaagtgtctgttcatgcaatatgtagttgtgtataccatgaagcatatcactgttgcat 48417614  T
Q  348 tgatgaaaaattttaatggcagttatgttattgttgaatgtctaaagctttttccacccgaacaccaaaatgtaagtaatgctgcgtccctatttttcat 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48417613 tgatgaaaaattttaatggcagttatgttattgttgaatgtctaaagctttttccacccgaacaccaaaatgtaagtaatgctgcgtccctatttttcat 48417514  T
Q  448 gcattaaaattcttatatttaactagaatgatta 481  Q
    ||||||||||||||||||||||||||||||||||    
T  48417513 gcattaaaattcttatatttaactagaatgatta 48417480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 50503191 - 50503265
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50503191 cactattataaacacaaatttatattttagatttattcaattaatgatgtatatgatctttattatagaccacat 50503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 34954028 - 34953890
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||  |     | |||||||||| ||||    
T  34954028 cactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaa 34953929  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    || || ||||||||||||||| ||||  |||||||||||    
T  34953928 atattgatttttgcttataatagtgactggagggtgtac 34953890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 33289107 - 33289033
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  33289107 cactgttataaacaaagatctacattttagatttatttaattaatgatgcatatgaactttattataggccacat 33289033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 48417867 - 48417810
Alignment:
Q  10 ggccgccactttttgtttgtttttaatcgtatacacactctgatcacactgttataaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  48417867 ggccgccactttttgtttgtttttaatcgtatacacactctaatcacactgttttaaa 48417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 14365497 - 14365425
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||| |||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||| |||||||||||    
T  14365497 cactattataaacaaaaatatatattttatattcatttaattaatgatatatatgatcttttttatagaccac 14365425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 33765808 - 33765921
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 163  Q
    |||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||  |     | || ||||||||||||||||| |||||||    
T  33765808 aaaaatttatattttaaattcgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttg 33765907  T
Q  164 cttataattgtgag 177  Q
    ||||||||| ||||    
T  33765908 cttataattatgag 33765921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 48083630 - 48083499
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt- 156  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||  |     | ||||||||| ||||||| ||     
T  48083630 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatgaacctaaaatatta 48083531  T
Q  157 atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||| |||| | |||||||||    
T  48083530 atttttgcttataatagtgaccagagggtgta 48083499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 43728194 - 43728267
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccaca 129  Q
    |||| |||||||||||||| |||||||||| || |||||||||||||| ||||| |||||||||||| ||||||    
T  43728194 cactattataaacaaaaatctatattttaggttaatttaattaatgatatatataatctttattataaaccaca 43728267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 47969506 - 47969567
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  47969506 aaaaaattatattttagattcgtttaattaatgatgtatatgatatttattatagaccacat 47969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 14891870 - 14891799
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| |||||||||| |||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  14891870 cactattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagacca 14891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 43738724 - 43738612
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 163  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||| | ||||| ||     | |||||||||| ||||||||| |||||||    
T  43738724 aaaaattaatattttatattcatttaattaatgatgtatatgatttttattataaatcacatatatcatctaatgaatgaatttaaaatgttaatttttg 43738625  T
Q  164 cttataattgtga 176  Q
    |||||||| ||||    
T  43738624 cttataatagtga 43738612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 1597202 - 1597268
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||| ||||| || |||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  1597202 ttataaacgaaaatatacattttaaatttattcaattaatgatgtatatgatctttattatcgacca 1597268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 3549792 - 3549907
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt 156  Q
    |||||| ||||||| || |||||||||| ||| |||||||||| |||| | |||||||||||||||||||   |||  | |||||||||| |||||||||    
T  3549792 ttataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacattatttaatgaatgaatttaaaatgtt 3549891  T
Q  157 -atttttgcttataat 171  Q
     |||||||||||||||    
T  3549892 aatttttgcttataat 3549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 10832126 - 10832049
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta 133  Q
    |||| |||||||||||||| || ||||||| || ||| |||||||| | ||||||||||||||||||||| |||||||    
T  10832126 cactattataaacaaaaatctacattttaggttcattcaattaatggtatatatgatctttattatagacaacattta 10832049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 44349943 - 44350012
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||| ||||||||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  44349943 ttataaacaaaagtttatattttagattcattcatttaatgatgcacatggtctttattatagaccacat 44350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 21321444 - 21321384
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||| ||| |||||||| |||||||||||||||||||||| |||||||||||    
T  21321444 tataaataaaaatatattttttagatatatttaattaatgatgtatatggtctttattata 21321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 39362847 - 39362891
Alignment:
Q  86 atttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  39362847 atttattcaattaatgatgtatatgatctttattatagaccacat 39362891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 42761466 - 42761530
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||||| ||||| |||| |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  42761466 ttataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagac 42761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 3013618 - 3013753
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 151  Q
    |||| |||||| |||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| |  | ||  |     | |||||||||| ||||    
T  3013618 cactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcatttaatgaatgaatgtaaa 3013717  T
Q  152 atgtta-tttttgcttataattgtgagcggagggtg 186  Q
    |||||| |||||||||||||| |||| |||||||||    
T  3013718 atgttaatttttgcttataatagtgaccggagggtg 3013753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 6508405 - 6508479
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  6508405 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 6508479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 8338683 - 8338757
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  8338683 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatgatctttattatagaccacat 8338757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 9590854 - 9590739
Alignment:
Q  78 tattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaatg----atgaatgaatctaaaatg-ttatttttgcttataatt 172  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||  | ||    ||||||||||||||||||   | |||||||||||||     
T  9590854 tattttaaattcattcaattaatgatgtatatgatctttattatataccacatacattgtttaatgaatgaatctaaaatgcaaaattttgcttataata 9590755  T
Q  173 gtgagcggagggtgta 188  Q
    |||| ||||| |||||    
T  9590754 gtgatcggagagtgta 9590739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 31998321 - 31998247
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||  |||||||||| ||| | ||||||||||||||||||||||||||||| |||||    
T  31998321 cactattataagcaaaactttgcattttagattcattcatttaatgatgtatatgatctttattatagatcacat 31998247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 2492603 - 2492534
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||| |||| |||||||||  ||| ||| ||||||||||||||||||||||||| |||||||    
T  2492603 ttataagcaaaagtttacattttagatccattcaataaatgatgtatatgatctttattataaaccacat 2492534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 17342355 - 17342416
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 117  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||||||||||  |||||||||    
T  17342355 cactgttataagcaaaaatttacattttacatttatttacttaatgatgtacgtgatcttta 17342416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 23398466 - 23398413
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  23398466 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtac 23398413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 2353021 - 2352961
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||||| || |||||||||||    
T  2353021 tataagcaaaaatttattttttagatacatttaattaatgatgtatgtgctctttattata 2352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 8465956 - 8466008
Alignment:
Q  78 tattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||||||||||    
T  8465956 tattttagattcatttatttaatgatgtatgtggtctttattatagaccacat 8466008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 11324559 - 11324491
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||| | |||||| ||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  11324559 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacat 11324491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 11482580 - 11482512
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||| | |||||| ||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  11482580 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacat 11482512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 13043371 - 13043411
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtata 108  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  13043371 caaaaattaatattttagatttatttaattaatgatgtata 13043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 26344228 - 26344296
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||| ||||||  |||||| ||||||||| ||||||||||||||| ||||||||  |||||||||||||    
T  26344228 cactattataagaaaaaatatatattttaaatttatttaattaataatgtatatagtctttattataga 26344296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 45639555 - 45639591
Alignment:
Q  94 aattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||||||||||||||||||||||||    
T  45639555 aattaatgatgtatatgatctttattatagaccacat 45639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 23575437 - 23575311
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt--tattt 160  Q
    ||||| ||| ||||||| || ||| | ||||||||| |||||||||||||||||||||||||      ||||  ||||||||| |||||||||  | |||    
T  23575437 aaaaaattacattttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcattaa--atgaatgaacctaaaatgtagttttt 23575340  T
Q  161 ttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||| | |||| ||||||||||||    
T  23575339 ttgcttatattagtgaccggagggtgtac 23575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 26674295 - 26674244
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26674295 attttaaattcattcaattaatgatgtatatggtctttattatagaccacat 26674244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 40988391 - 40988438
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||    
T  40988391 atattttacaattattcaattaatgatgtatatgatctttattataga 40988438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 41161479 - 41161610
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 155  Q
    |||||||||||| ||| ||||||  || ||| | ||||||||| | |||||||||||||||||||||||      ||||  |||||||||  ||||||||    
T  41161479 tataaacaaaaaattacattttaagttcattcatttaatgatgcacatgatctttattatagaccacatacatcattaa--atgaatgaacttaaaatgt 41161576  T
Q  156 ta-tttttgcttataattgtgagcggagggtgta 188  Q
    || |||||||||||| | |||| |||||||||||    
T  41161577 tattttttgcttatattagtgaccggagggtgta 41161610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 50755296 - 50755245
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttatta 120  Q
    |||||| || ||||||| || |||||||||||||||||||||||||||||||    
T  50755296 aaaaatctacattttaggttcatttaattaatgatgtatatgatctttatta 50755245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 33939429 - 33939355
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  33939429 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 33939355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 45115302 - 45115228
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  45115302 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 45115228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 7461387 - 7461326
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||  ||||||||||| |||||||    
T  7461387 aaaactttgtattttagattcatttaattaatgatgtacattgtctttattatacaccacat 7461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 36486553 - 36486618
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||| |||||||||| |||||||||| |||| || |||||||||||  |||||||||||| ||||    
T  36486553 tataagcaaaaatttagattttagattcatttgatcaatgatgtatacaatctttattataaacca 36486618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 41970915 - 41970858
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttat 118  Q
    ||||||| ||||||  |||||||||||||||| |||| ||||||||||||| ||||||    
T  41970915 ttataaagaaaaataaatattttagatttattcaattgatgatgtatatgacctttat 41970858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 50550127 - 50550261
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| ||||||| ||||||  | ||| || ||| ||| ||||||| ||||||||||||||||||||||| |||||  |     | |||||||||||||||    
T  50550127 cactattataaataaaaatcaacattataaattcattcaattaataatgtatatgatctttattatagatcacatacatcatttaatgaatgaatctaaa 50550226  T
Q  152 atgtt-atttttgcttataattgtgagcggagggt 185  Q
    ||||| ||||||  ||||||| |||| ||||||||    
T  50550227 atgttgatttttctttataatagtgatcggagggt 50550261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 37248146 - 37248206
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||||| ||||||||||||||| || |||||||||| || |||| |||||||    
T  37248146 aaaatttattttttaaatttatttaattaataatatatatgatctataatataaaccacat 37248206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 45115263 - 45115315
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  45115263 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 45115315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 3906893 - 3906842
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||| |||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  3906893 cactattataaacaaaaatttattttttagattcatttaataaatggtgtat 3906842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 5595539 - 5595427
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatgatgaatgaatctaaaatgtt--atttttg 163  Q
    |||||| || |||||||||| ||| ||||| | || |||||| ||||||||||| | |||||   ||| | ||||||||||||||||||||  | |||||    
T  5595539 aaaaatctacattttagattcattcaattagtaatatatatggtctttattatatatcacatacattattaatgaatgaatctaaaatgttagaattttg 5595440  T
Q  164 cttataattgtga 176  Q
    |||||||| ||||    
T  5595439 cttataatagtga 5595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 13043472 - 13043413
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctt 115  Q
    |||| ||||||  ||||||| |||||||||||| ||| |||||||||||||||| |||||    
T  13043472 cactattataagtaaaaattaatattttagattcattcaattaatgatgtatataatctt 13043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 24981934 - 24981981
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagg 183  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  24981934 atgaatgaatctaaaatgttgatttttgcttataatagtgaccggagg 24981981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 45010846 - 45010917
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||||| ||||||||| ||||    
T  45010846 cactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatgatatttattataaacca 45010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 50154337 - 50154388
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||||||||||| |||||||||||  |||||||||| |||||    
T  50154337 attttagattcatttaattaataatgtatatgattattattatagatcacat 50154388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 9002837 - 9002787
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||| ||||    
T  9002837 ttttagattcatttaataaatgatgtatgtgatctttattgtagacaacat 9002787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 13877117 - 13877051
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| ||||||  |||| |||| |||||||||||||| |||  || |||||||||||||||||||||    
T  13877117 cactcttataagtaaaattttacattttagatttattcaatctataatgtatatgatctttattata 13877051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 14967357 - 14967283
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||  | |||||||||| ||| | | |||||||||| ||||||||||||||| ||||||    
T  14967357 cactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtgatctttattataggccacat 14967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 18607217 - 18607151
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| |||||||||||||| ||||||||| ||| ||| ||||||| || ||||| || |||||||||    
T  18607217 cactattataaacaaaaatctatattttaaattcattcaattaataatatatataatttttattata 18607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 25547479 - 25547545
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| |||||| ||||| || | |||||||||| ||||||| ||||||||||||| |||||| ||||    
T  25547479 cactattataatcaaaatttgacattttagattcatttaataaatgatgtatatggtctttaatata 25547545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 31325838 - 31325892
Alignment:
Q  76 tatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| ||||||| |||||| || |||||||| ||||| ||||    
T  31325838 tatattttagatttattcaattaataatgtatgtgttctttattgtagacaacat 31325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 44673899 - 44673941
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgat 103  Q
    |||||||||||||||||| |||||| |||||||||| ||||||    
T  44673899 ttataaacaaaaatttattttttaggtttatttaataaatgat 44673941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 6758554 - 6758623
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||  ||||||||||||||    
T  6758554 cactattataagcaaaactttgcattttacattcattcaattaatgatgtatatagtctttattatagac 6758623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 8338722 - 8338673
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggt 185  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  8338722 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 8466053 - 8465984
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||| |||  |||||||||| ||||| |||||||||||| || ||| || || |||||||||    
T  8466053 ttataaacaaaactttgcattttagattcatttatttaatgatgtatgtggtctataataaagaccacat 8465984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 13048677 - 13048718
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  13048677 caaaaattaatattttagattcattcaattaatgatgtatat 13048718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 13053674 - 13053715
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  13053674 caaaaattaatattttagattcattcaattaatgatgtatat 13053715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 21444218 - 21444291
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaat 135  Q
    ||||| |||||||  |||||||||||| ||||||| ||| || ||| || |||||||||||||| |||| ||||    
T  21444218 tataagcaaaaatacatattttagattcatttaataaataatatatgtggtctttattatagacaacatataat 21444291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 24115765 - 24115830
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||| ||||||  || ||||||| |||||| | ||||||||| | ||||||||||||||||||||    
T  24115765 tataagcaaaaaactacattttaggtttattcatttaatgatgcacatgatctttattatagacca 24115830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 31699000 - 31699069
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||| || ||| |||||| ||| | ||||||||| | ||||||||||||||||| |||||    
T  31699000 ttataagcaaaaatatacattgtagattcattcatttaatgatgcacatgatctttattatagagcacat 31699069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 31889170 - 31889101
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||||  ||||| ||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  31889170 ttataagcaaaaatttactttttacattcattcatttaatgatgcacatggtctttattatagaccacat 31889101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 35544652 - 35544591
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| ||||||| | | |||| ||||| || |||| ||||||||||||||    
T  35544652 aaaaatttatattttaaatttattcattaaatggtgtatgtggtcttcattatagaccacat 35544591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 38834619 - 38834672
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||| |||||| ||||||||||| ||||||||| ||| ||| ||||||||||||    
T  38834619 cactattataagcaaaaatttattttttagattcattaaataaatgatgtatat 38834672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 39617340 - 39617393
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacattta 133  Q
    ||||||||||||| ||| | |||||||| ||||| ||| |||||||||||||||    
T  39617340 ttttagatttattgaatgagtgatgtatgtgatcattaatatagaccacattta 39617393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 39708187 - 39708240
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||||||||||| ||||| ||||||||||||||  || |||||||||| |||||    
T  39708187 cactgttataaaaaaaaaattatattttagattagttcaattaatgatatatat 39708240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 8397092 - 8397048
Alignment:
Q  86 atttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||||||||| ||||| |||||||||||||| |||||    
T  8397092 atttattcaattaatgatatatataatctttattatagatcacat 8397048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 8455066 - 8455126
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattat 121  Q
    |||||||||||||| || ||||||| || ||| |||||| ||| ||||| |||||||||||    
T  8455066 ttataaacaaaaatctacattttaggttcattcaattaacgatatatataatctttattat 8455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 14967318 - 14967358
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtga 176  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  14967318 atgaatgaatctaaaatgttgatttttgcttataatagtga 14967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 20621348 - 20621288
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| || |||||||||| ||| |||||| ||| ||| ||||| ||||||||||||||||    
T  20621348 aaaatatacattttagattcattgaattaacgatatatgtgatcattattatagaccacat 20621288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 24115877 - 24115829
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    |||||||||||| |||||| |||| || ||||| |||||||||||||||    
T  24115877 tataaacaaaaaattatatcttaggttcatttatttaatgatgtatatg 24115829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 31008273 - 31008333
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||| ||  ||||||||  |||||||||||||||||| || |||||||||||    
T  31008273 tataagcaaaaatctactttttagatacatttaattaatgatgtatgtggtctttattata 31008333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 33939390 - 33939442
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||    
T  33939390 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 33939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 37589612 - 37589676
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| ||||| | ||||||||||||| ||||||||||| || |||||  ||||| ||||||||||    
T  37589612 ataagcaaaagtctatattttagattcatttaattaataatttatattgtctttgttatagacca 37589676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 43728313 - 43728269
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgt 105  Q
    |||||| |||||||| |||||||||||| ||| ||||||||||||    
T  43728313 ttataagcaaaaattaatattttagattcattaaattaatgatgt 43728269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 46412750 - 46412698
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||| ||| |||||||||||||| |||| |||| ||||||    
T  46412750 atgaatgaatctaaaatattaatttttgcttataatagtgatcggatggtgta 46412698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 14772678 - 14772543
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa--tgatgaatgaatctaaaat 153  Q
    |||| |||||| ||||| ||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||  | |  | ||||||||| |||||||    
T  14772678 cactattataagcaaaactttatattttagattaattcaattaatgatgtatatagtctttattatagaccacacatcatttaatgaatgaacctaaaat 14772579  T
Q  154 gtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||| ||||||||||||||| |||| |||||||||||    
T  14772578 gttgatttttgcttataatagtgaccggagggtgta 14772543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 71267 - 71406
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta---atgatgaatgaatc---ta 149  Q
    |||| |||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |    | |||||||||||   ||    
T  71267 cactattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacatacacatttaatgaatgaatctaata 71366  T
Q  150 aaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||| ||||||||||||||| |||| |||||||||||    
T  71367 aaatgttgatttttgcttataatagtgatcggagggtgta 71406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 43482899 - 43482830
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  43482899 ttataaacaaaaatttacattttatatttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 694214 - 694288
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||| || |||||| ||||||| ||||||| |||||||||||||||||||||||||||||    
T  694214 cactattataaacaaaaatataaattttaaatttattcaattaattatgtatatgatctttattatagaccacat 694288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 3100523 - 3100412
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgtt-atttttgc 164  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||   | | | | ||||||||||||||||||| ||||||||    
T  3100523 aaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgc 3100424  T
Q  165 ttataattgtga 176  Q
    ||||||| ||||    
T  3100423 ttataatagtga 3100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 38370506 - 38370445
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  38370506 aaaactttgtattttatatttatttaattaatgatgtatatgatctttattatagactacat 38370445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 22650970 - 22650914
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  22650970 tttacattttagatttatttatttaatgatgtatatggtctttattatagaccacat 22650914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 18033487 - 18033413
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||||||| | ||||||||||| ||| |||||||||||||||||||    
T  18033487 cactattataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattatagaccacat 18033413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 11795750 - 11795818
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||||||  | |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  11795750 tataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattatagaccacat 11795818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 33075079 - 33075147
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | |||||||||||||| ||||||||||||    
T  33075079 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttactatagaccacat 33075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 5984110 - 5984043
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||||| ||||| |||  |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  5984110 ttataagcaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccac 5984043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 10437646 - 10437782
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt--taatg--atgaatgaatctaaa 151  Q
    |||| ||||||  |||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||||||||||| ||||   ||||   || ||||||||||||    
T  10437646 cactattataagtaaaactttgtattttaaattcattcaattagtgatgtatatgat-tttattatagactacatacataatttaataaatgaatctaaa 10437744  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  10437745 atgttgatttttgcttataatagtgaccggagggtgta 10437782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 25773369 - 25773307
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||||||| |||||||||||||    
T  25773369 tataaacaaaaatttacattttacattcaatcaattaatgatgtatatggtctttattataga 25773307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 780777 - 780724
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  780777 aaaaatatatattttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 25408669 - 25408538
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgt-t 156  Q
    ||||| ||||||||||| ||||||||| ||| ||| |||||||||| || |||||||| ||||| ||||   | | | | |||||||||||||||| |      
T  25408669 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatga 25408570  T
Q  157 atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||| |||||| |||||||||||    
T  25408569 atttttgcttatatttgtgaccggagggtgta 25408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 30371460 - 30371399
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||| |||||||||||||| |||||||||||  |||||||| |||||||||||    
T  30371460 ttataagcaaaaaattatattttagattcatttaattaatattgtatatggtctttattata 30371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 31706078 - 31706017
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| || |||||||||||||||||    
T  31706078 aaaaatttacattttaaattcatttaattaataatgtatataatttttattatagaccacat 31706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 35032397 - 35032328
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||||||| |||||||||| ||| ||||||| ||||||||||| ||| |||||||| ||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtatatgatttttgttatagactacat 35032328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 8681696 - 8681830
Alignment:
Q  59 tgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatg 154  Q
    |||||||| ||||| |||| |||||| ||| ||||||||||||||| ||||  |||||||| ||||||||||   |||  |||||||||||| ||||| |    
T  8681696 tgttataagcaaaactttaaattttaaattcatttaattaatgatgaatattgtctttattgtagaccacatacattatttgatgaatgaatttaaaacg 8681795  T
Q  155 tt-atttttgcttataattgtgagcggagggtgta 188  Q
    || | |||||| |||||| |||| ||||| |||||    
T  8681796 ttgagttttgcctataatagtgatcggagagtgta 8681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 31691405 - 31691317
Alignment:
Q  40 atacacactctgatcacactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||||||  | ||||||  |||||||||||||| ||||| ||| ||||||||||||||||  | ||||||| |||||||||    
T  31691405 atacacactccgatcac--tattataagtaaaaatttatatttgagattcattcaattaatgatgtatatattatttattacagaccacat 31691317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 4082870 - 4082816
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||||    
T  4082870 cactattataaacaaaaattcacattttagatttattcaataaatgatgtatatg 4082816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 14153377 - 14153451
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| ||  ||||| ||| ||| | ||||||||| |||||||||||||||||||||||||    
T  14153377 cactattataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattatagaccacat 14153451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 17967447 - 17967373
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||||||||||| |||||||| ||| ||| ||| |||||||||| || |||||| ||||||| ||||    
T  17967447 cactattataaacaaaaattgatattttatattcattcaataaatgatgtatgtggtctttaatatagacaacat 17967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 26141763 - 26141837
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  26141763 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 26141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 32398135 - 32398082
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||| |||||||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  32398135 cactattataaacaaaaatctatattttaaattcattcaattaatgatgtatat 32398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 36895045 - 36895114
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| |||||||||||| | || |||||| |||||||||||||||||| ||| || |||||| |||||||    
T  36895045 cactattataaacaaaattctacattttaaatttatttaattaatgatatatgtggtctttactatagac 36895114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 43117433 - 43117381
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||| || ||||||||||||||| |||| |||||||||||    
T  43117433 atgaatgaatctaaaatattgatttttgcttataatagtgatcggagggtgta 43117381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 15549419 - 15549470
Alignment:
Q  138 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| ||||||| ||||||| |||| |||||||||||    
T  15549419 tgaatgaatctaaaatgttgatttttgtttataatagtgaccggagggtgta 15549470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 17153442 - 17153497
Alignment:
Q  67 acaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||| || | |||||||| ||| |||||||||||| ||||||||||||||||    
T  17153442 acaaaaatgtacaatttagattcattcaattaatgatgtgtatgatctttattata 17153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 29177843 - 29177800
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaa 99  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||    
T  29177843 cactgttataaacaaaaatttacattttagattcattcaattaa 29177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 37067892 - 37067837
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttt 116  Q
    |||||| ||||||| || |||||||||| | ||||||||||||||||||| |||||    
T  37067892 ttataagcaaaaatctacattttagattcaattaattaatgatgtatatggtcttt 37067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 13157365 - 13157407
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||| |||| ||||||||||||||||| |||||||||||    
T  13157365 ttttagatatattcaattaatgatgtatatggtctttattata 13157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 35969073 - 35969123
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| |||||||||||||||||| || ||| ||||||| |||||||    
T  35969073 ttttagattcatttaattaatgatgtatgtggtctatattataaaccacat 35969123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 10463006 - 10463047
Alignment:
Q  86 atttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  10463006 atttattcaaataatgatgtatatgatttttattatagacca 10463047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 19869055 - 19868982
Alignment:
Q  56 cactgttataa-acaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    ||||||||||| | |||||||||| ||||||||||||| | ||||||||| | ||||| ||| ||||| |||||    
T  19869055 cactgttataagaaaaaaatttatgttttagatttattcatttaatgatgcacatgatttttgttataaaccac 19868982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 26045278 - 26045319
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatga 102  Q
    |||||| ||||||||||||||||||||| ||| |||||||||    
T  26045278 ttataagcaaaaatttatattttagattcattcaattaatga 26045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 26432617 - 26432584
Alignment:
Q  59 tgttataaacaaaaatttatattttagatttatt 92  Q
    |||||||| |||||||||||||||||||||||||    
T  26432617 tgttataatcaaaaatttatattttagatttatt 26432584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 31154688 - 31154757
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||||||||  ||||||||||||| |||||||||| |||||  | |||| |||||| |||||    
T  31154688 ttataaataaaaatttaccttttagatttattcaattaatgatctatatagtatttagtatagatcacat 31154757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 33652535 - 33652494
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgat 103  Q
    ||||| |||||||| |||||||||||||||||||| ||||||    
T  33652535 tataagcaaaaattaatattttagatttatttaataaatgat 33652494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 33652698 - 33652620
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttattt----aattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||| |||||| ||||||||| ||||||||    |||| ||||||||| |||||| ||||||| |||||||    
T  33652698 cactattataaataaaaatatatattttaaatttatttaataaattgatgatgtatgtgatctatattataaaccacat 33652620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 41005787 - 41005726
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| ||| ||| ||||||||| ||||||| || ||| ||||||| ||||    
T  41005787 aaaaatttatattttaaattcattaaattaatgaggtatatggtcgttagtatagactacat 41005726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 4297231 - 4297271
Alignment:
Q  82 ttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  4297231 ttagatttattcaattaatgatgtatatgttatttattata 4297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 11795782 - 11795734
Alignment:
Q  138 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggt 185  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||||||||    
T  11795782 tgaatgaatctaaaatgttgatttttgcttatattagtgaccggagggt 11795734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 26141802 - 26141750
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||    
T  26141802 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 26141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 26300125 - 26300185
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| || |||||||||||    
T  26300125 tataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattata 26300185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 31963613 - 31963577
Alignment:
Q  94 aattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  31963613 aattaatgatgtatatggtctttattatagactacat 31963577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 36136330 - 36136267
Alignment:
Q  98 aatgatgtatatgatctttattatagaccacatttaatgatgaatgaatctaaaatgttattttt 162  Q
    ||||||||||||| |||||||||||||  |||| | || ||||||||||||||||| ||| ||||    
T  36136330 aatgatgtatatggtctttattatagattacatat-ataatgaatgaatctaaaatattaatttt 36136267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 37944616 - 37944676
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| |  ||||||||  ||| |||||||||||||| ||||||||||||||    
T  37944616 tataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattata 37944676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 1961317 - 1961442
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||  |     | |||||||||||||||    
T  1961317 cactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaa 1961416  T
Q  152 atgtt-atttttgcttataattgtga 176  Q
    ||||| ||||||||||||||| ||||    
T  1961417 atgttgatttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 15119909 - 15119772
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||| || |||||||||||||| | ||||||||||||||  |||||||||||||||||||  |     | |||||||||||||||    
T  15119909 cactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaa 15119810  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| || ||||||||    
T  15119809 atgttaatttttgcttataatagtgaccgaagggtgta 15119772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 7079502 - 7079370
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||  ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| ||     | ||| |||||| ||||    
T  7079502 cactattataagcaaaaacatatattttagattcatttaattaatgatgtatatggtcttaattatagaccacatatatcatttaatggatgaatttaaa 7079403  T
Q  152 atgtt-atttttgcttataattgtgagcggagg 183  Q
    ||||| ||||||||||||||| |||| ||||||    
T  7079402 atgttgatttttgcttataatagtgatcggagg 7079370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 2050098 - 2050172
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  2050098 cactattataagcaaaactttttattttagatttatttatttaatgatgtatatgatctttattataaaccacat 2050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 10996259 - 10996328
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||    
T  10996259 ttataagcaaaaatttatattttaaattcattgaattaatgatgtatatggtctttattatagaccacat 10996328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 26003567 - 26003430
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||| || |||||||||| ||| ||||||||||||||||| ||||||||||| || ||||  |     | ||||||||| |||||    
T  26003567 cacttttataagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatatactacatacatcatttaatgaatgaacctaaa 26003468  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    || || |||||||||||||||||||| |||||||||||    
T  26003467 atattgatttttgcttataattgtgaccggagggtgta 26003430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 38465909 - 38465784
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-attttt 162  Q
    ||||||| || |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||  |     | |||||| ||||||||||||| ||||||    
T  38465909 caaaaatctacattttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttgattttt 38465810  T
Q  163 gcttataattgtgagcggagggtgta 188  Q
    ||||||||| |||| |||||||||||    
T  38465809 gcttataatagtgaccggagggtgta 38465784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 15859678 - 15859609
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||    
T  15859678 ttataagcaaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacat 15859609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 11342102 - 11342038
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatta 120  Q
    |||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  11342102 cactattataagcaaaaatctatattttagattcatttaattaatgatgtatatgatttttatta 11342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 11726541 - 11726489
Alignment:
Q  138 tgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtaca 190  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  11726541 tgaatgaatctaaaatgttatttttgcttataatagtgaccggagggtgtaca 11726489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 596040 - 596103
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||||| ||||||||||||||    
T  596040 ttataaacaaaaattaatattttagattcatcttattaatgatgtatataatctttattataga 596103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 15916852 - 15916745
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt-attttt 162  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| ||||   |||  | ||||||||||||||||| || ||||||    
T  15916852 caaaaattt-tattatagatttattcaattaatgatgtatatgatctttgttatagactacatacattatttaatgaatgaatctaaaatattgattttt 15916754  T
Q  163 gcttataat 171  Q
    |||||||||    
T  15916753 gcttataat 15916745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 32630419 - 32630488
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||| || ||||| |||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  32630419 ttataaacaaaaatctacattttggattcattcaattaatgatgtatatggtctttattatagactacat 32630488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 13994283 - 13994335
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  13994283 atgaatgaatctaaaatgttagttttgcttataatagtgaccggagggtgtac 13994335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 37195066 - 37195134
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||| || |||||||||||| | | ||||||||||||||||| |||||||||||||||||||    
T  37195066 tataagcaaaagttaatattttagattcactcaattaatgatgtatatggtctttattatagaccacat 37195134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 19951572 - 19951509
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    ||||||||||||||  |||||||| ||| ||| ||||||||||||||||| |||||||||||||    
T  19951572 ttataaacaaaaatcaatattttatattcattcaattaatgatgtatatgctctttattataga 19951509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 32460749 - 32460824
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaatt-aatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||| |||||||||| |||| ||| |||||||||||| |||||||||||||| |||||    
T  32460749 cactattataagcaaaaatttacattttagattaattttatttaatgatgtatattatctttattatagaacacat 32460824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 8383198 - 8383267
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||| ||||||||||||| ||| | ||||| ||||| ||| ||||||||||||| |||||    
T  8383198 ttataaacaaaaatctatattttagattcattcatttaataatgtacatggtctttattatagatcacat 8383267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 23377973 - 23378087
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataattg 173  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||| |||||  |     | || |||||||||||||| || |||||||||||||||      
T  23377973 attttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaaaatattaatttttgcttataataa 23378072  T
Q  174 tgagcggagggtgta 188  Q
    ||| |||||||||||    
T  23378073 tgaccggagggtgta 23378087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 36547354 - 36547423
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||| |||||| |||||    
T  36547354 ttataaacaaaaattgacattttaaattcatttaataaatgatgtatgtgatctttaatatagatcacat 36547423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 13988385 - 13988437
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  13988385 atgaatgaatctaaaatgttagttttacttataatagtgaccggagggtgtac 13988437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 20504257 - 20504317
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||||||| ||  |||||||| |||| |||||||||||||||| ||||||||||||    
T  20504257 tataaacaaaaatctactttttagatatattcaattaatgatgtatataatctttattata 20504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 42530500 - 42530637
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac----cacatttaatgatgaatgaatctaaa 151  Q
    |||| ||||||  ||||||||| |||||||||| |||||||||||  |||||| | ||||||||||||||     ||||    | |||||||||| ||||    
T  42530500 cactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaatgaatgtaaa 42530599  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| ||||| |||||    
T  42530600 atgttaatttttgcttataatagtgaccggagagtgta 42530637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 15900351 - 15900288
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    |||| ||||||| ||||||| |||||||| ||||||||||| |||||||||| || ||||||||    
T  15900351 cactattataaataaaaattaatattttacatttatttaataaatgatgtatgtggtctttatt 15900288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 8740527 - 8740601
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  8740527 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 8740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 11726526 - 11726641
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt-atttttgcttataattg 173  Q
    |||||||||| ||| ||| |||||||||||| ||||||||||| || |||||  |     | |||||||||||||||||||| ||||||||||||||| |    
T  11726526 attttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 11726625  T
Q  174 tgagcggagggtgtac 189  Q
    |||  ||||| |||||    
T  11726626 tgactggaggatgtac 11726641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 14393228 - 14393178
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||||||||||||||||||||   || ||||||||||||    
T  14393228 ttttagatttatttaattaatgatgtatatgattcatagtatagaccacat 14393178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 26234156 - 26234082
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  26234156 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 26234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 32218687 - 32218637
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||||| ||| |||||||||||||||| || ||||||||||||||    
T  32218687 atattttagattcattcaattaatgatgtatataatttttattatagacca 32218637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 37396236 - 37396286
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||||||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccacat 37396286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 38618527 - 38618453
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  ||||||||| |||||| ||| ||| ||||||  ||||||| |||||||||||||||||||||    
T  38618527 cactattataaggaaaaatttacattttacattcattcaattaaaaatgtataagatctttattatagaccacat 38618453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 40187370 - 40187312
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    ||||||||||||||||| |||||||||| ||| | |||||||||||| || ||||||||    
T  40187370 ttataaacaaaaatttacattttagattgattcagttaatgatgtatgtggtctttatt 40187312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 8510598 - 8510651
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||    
T  8510598 atgaatgaatccaaaatgttagtttttgcttataatagtgaccggagggtgtac 8510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 5762533 - 5762577
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||    
T  5762533 ttttaaattcattcaattaatgatgtatatgatctttattataga 5762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 10602388 - 10602352
Alignment:
Q  94 aattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10602388 aattaatgatgtatatggtctttattatagaccacat 10602352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 11153216 - 11153287
Alignment:
Q  61 ttataaacaaaaatttat--attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||| ||||  |||||||||| ||| |||||||||||||| ||  ||||||||||||||||||    
T  11153216 ttataagcaaaaaattatgcattttagattcattcaattaatgatgtatgtgggctttattatagaccacat 11153287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 39939888 - 39939832
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 117  Q
    ||||||||||||||| |||||||| ||| ||||||| |||||||||  |||||||||    
T  39939888 ttataaacaaaaattgatattttaaattcatttaataaatgatgtacgtgatcttta 39939832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 15861778 - 15861723
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||| |||||||||||||  || ||||||| |||||||| ||||||||||||||    
T  15861778 aaaaatctatattttagattcgttcaattaattatgtatataatctttattataga 15861723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 27331853 - 27331904
Alignment:
Q  138 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||    
T  27331853 tgaatgaatctaaaatgttgatttttgcttataatagtgaccggaggatgta 27331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 37182831 - 37182898
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||| |||||||||| ||| | | ||||||||||||   ||||||||||||||||||    
T  37182831 ataagcaaaaatttacattttagattcattaattaaatgatgtatatagcctttattatagaccacat 37182898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 40204448 - 40204525
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtat---atgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| |||||| || ||| ||| ||||||||||||||   ||||||||||||||||| |||||    
T  40204448 cactattataagcaaaaatctatattatacattcattcaattaatgatgtatatgatgatctttattatagatcacat 40204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 41805282 - 41805353
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| ||||| |||  |||||| ||| ||| ||||||||||||||||  ||||||||||||||||    
T  41805282 cactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagacca 41805353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 4032727 - 4032689
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4032727 aaaaatttattttttagatttatttatttaatgatgtat 4032689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 11093661 - 11093588
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||||||||||| | |||  | ||| ||||||||||| ||||||||  |||||||||||||||||||    
T  11093661 cacttttataaacaaaaattaacattaaa-attcatttaattaattatgtatatagtctttattatagaccacat 11093588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 27497386 - 27497328
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||| || ||||||||||  |||| ||||| ||||||||| ||||||||||||||||    
T  27497386 aaaaatctacattttagattcctttatttaataatgtatatggtctttattatagacca 27497328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 31175107 - 31175153
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttatta 120  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  31175107 tttatattttagattcattcaattaatgatgtatctgatctatatta 31175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 32143538 - 32143464
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||| |||| |||||| ||| ||| ||||||||| ||||||  ||||||| ||| |||||||    
T  32143538 cactgttataagcaaaactttacattttaaattcattcaattaatgaagtatatagtctttatcataaaccacat 32143464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 41823773 - 41823823
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||| |||||||||||||||||| |||| | |||||||||||||||    
T  41823773 ttttaaattcatttaattaatgatgtatttgatttatattatagaccacat 41823823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 42955142 - 42955108
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatc 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  42955142 attttagatttattcaattaatgatgtatatgatc 42955108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 10041563 - 10041624
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||| |||||||||| |||||||||||||||||| || | | || ||||||||||||    
T  10041563 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacat 10041624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 13304484 - 13304545
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||| ||||||||||||||||||||  || ||||  | |||||||| ||||||||||||    
T  13304484 ttataaataaaaatttatattttagattctttcaattttttatgtatataatctttattata 13304545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 13882776 - 13882829
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| |||||| ||||||| ||||  |||||||||||    
T  13882776 atgaatgaatctaaaatgttagtttttgtttataatagtgacgggagggtgtac 13882829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 14022901 - 14022954
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| |||||| ||||||| ||||  |||||||||||    
T  14022901 atgaatgaatctaaaatgttagtttttgattataatagtgacaggagggtgtac 14022954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 14308740 - 14308793
Alignment:
Q  138 tgaatgaatctaaaatgttatttt-tgcttataattgtgagcggagggtgtaca 190  Q
    |||||||||||||||| | ||||| |||||||| |||||| |||||||||||||    
T  14308740 tgaatgaatctaaaatatgattttttgcttatatttgtgatcggagggtgtaca 14308793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 23378069 - 23378016
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 114  Q
    |||||| |||||||| |||||||||||| ||||| | |||||||||| ||||||    
T  23378069 ttataagcaaaaattaatattttagattcatttattaaatgatgtatgtgatct 23378016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 31024280 - 31024178
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt-atttttgcttataattg 173  Q
    |||||||||| ||| | | ||||||||||||  |||||||||| ||||||||  |     | |||||||||||||||||||| ||||||||||||||| |    
T  31024280 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 31024181  T
Q  174 tga 176  Q
    |||    
T  31024180 tga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 43732151 - 43732220
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||| || |||||||||| ||| ||||||||||| ||||| || |||| ||| |||||||    
T  43732151 ttataagcaaaaatatacattttagattcattcaattaatgatgaatatggtcattatcatataccacat 43732220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 15119870 - 15119922
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||| ||||||||||||  ||||||||||||||| |||| |||||||||||    
T  15119870 atgaataaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 15119922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 19612955 - 19613023
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||| ||||||||||||| ||| | ||||||||| | ||  | |||||||||||||||||    
T  19612955 tataagcaaaaatctatattttagattcattcatttaatgatgcacatagtttttattatagaccacat 19613023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 19950131 - 19950199
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||  |||||||||| || ||||| ||||||||| | ||| ||||||||||| |||||||    
T  19950131 tataagcaaaaaactatattttaggttcatttatttaatgatgcacatggtctttattatataccacat 19950199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 21183420 - 21183472
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||| ||||||||||||||  |||| |||||| ||||    
T  21183420 atgaatgaatctaaaatgttgatttttgcttataacagtgaccggaggatgta 21183472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 26234117 - 26234169
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||    
T  26234117 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 26234169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 35438633 - 35438692
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| ||||||| ||||||||||||| ||| |||||   ||||||||| ||||||||||||||    
T  35438633 ataagcaaaaatctatattttagattcattcaatta---atgtatatggtctttattatagac 35438692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 43701463 - 43701423
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttatt 119  Q
    |||||||||||||| ||||||||||||||||| | ||||||    
T  43701463 attttagatttattcaattaatgatgtatatggtttttatt 43701423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 52215888 - 52216026
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| |||||||||| |||||||||| ||  |||| ||||||||||||||||||||||||||||||||  |     | |||| ||||||||||    
T  52215888 cactattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaatgagtgaatctaaa 52215987  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    ||||| ||||||||||||||| |||| ||||||||||||    
T  52215988 atgttgatttttgcttataatagtgaccggagggtgtac 52216026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 37897695 - 37897815
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaatgtt 156  Q
    |||||| ||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||   |||  | |||||||||| |||||||||    
T  37897695 ttataagcaaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgtt 37897794  T
Q  157 -atttttgcttataattgtga 176  Q
     ||||||||||||||| ||||    
T  37897795 gatttttgcttataatagtga 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 12744909 - 12745047
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| |||||| ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||  |     | ||||||| |||||||    
T  12744909 cactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatctaaa 12745008  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    ||||| ||||||||||||||| |||| || |||||||||    
T  12745009 atgttaatttttgcttataatagtgaccgaagggtgtac 12745047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 29389335 - 29389409
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||    
T  29389335 cactattataagcaaaaatttatattttagattcgttcaattaatgatgtatatgatctttattatagatcacat 29389409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 9492689 - 9492758
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||| ||||    
T  9492689 ttataaacaaaaatttacattttagatttatttaattaattatgtatgtggtctttattatagacgacat 9492758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 10872804 - 10872667
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | |||||  |     | |||||||||| ||||    
T  10872804 cactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaatgaatttaaa 10872705  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    || || ||||||||||||||| ||||  ||||||||||    
T  10872704 atattgatttttgcttataatagtgactggagggtgta 10872667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 35987557 - 35987489
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||    
T  35987557 tataaacaaaattttatattttagatttattcaattaataatgtatatgttctttattatagatcacat 35987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 45736819 - 45736682
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||| ||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||  |     | |||||||||||||||    
T  45736819 cactattataagcaaaattttatattttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatttaatgaatgaatctaaa 45736720  T
Q  152 atgt-tatttttgcttataattgtgagcggagggtgta 188  Q
     | |  ||||||||||||||| |||| |||||||||||    
T  45736719 ctatcgatttttgcttataatagtgaccggagggtgta 45736682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 50466834 - 50466894
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  50466834 aaaaatttatattttagattcattcaattaatgatgtatatgatcttta-tatagaccacat 50466894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14756429 - 14756490
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  14756429 aaaattttacattttagatttattcatttaatgatgtatatggtctttattatagaccacat 14756490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 51060676 - 51060737
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  51060676 ttataagcaaaaatttacattttagattaattcaattaataatgtatatgatctttattata 51060737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 26121570 - 26121621
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26121570 attttagattcattcaattaatgatgtatatggtctttattatagaccacat 26121621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 331930 - 331856
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||| | |||||||||| ||| | | |||||||||||| ||||||||||||||||||||    
T  331930 cactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacat 331856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 4182039 - 4181989
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacat 4181989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 26244412 - 26244462
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacat 26244462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 29222934 - 29222861
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||  ||| ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||    
T  29222934 cactgttataagcaaac-tttgtattttaaatttattcaattaataatgtatatgatctttattatagacaacat 29222861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 31474749 - 31474798
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  31474749 ataaacaaaattttatattttagattcatttaataaatgatgtatatgat 31474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 331891 - 331943
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  331891 atgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 32758980 - 32759040
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||  || |||||||||||    
T  32758980 tataaataaaaatttattttttagatatatttaattaatgatgtacgtggtctttattata 32759040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 35237704 - 35237752
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  35237704 tttatattttagatccatttaattaatgatgtatatggtctttattata 35237752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 37807627 - 37807568
Alignment:
Q  73 atttatattttagatttattt--aattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||||||||| |||||||    
T  37807627 atttatattttagattttttttcaattaatgatgtatatggtctttattataaaccacat 37807568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 43177096 - 43177170
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatga---tgtatatgatctttattatagacca 127  Q
    |||| |||||||||||||| || |||||| ||| |||||||||||||   ||||||| |||||||||||||||||    
T  43177096 cactattataaacaaaaatctacattttaaattcatttaattaatgatggtgtatataatctttattatagacca 43177170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 24075572 - 24075447
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 156  Q
    |||||| ||||||| || |||||||||| ||| |||| |||||||||||| |||||||  ||||||||||  |     | ||||||||||||||||||||    
T  24075572 ttataagcaaaaatctacattttagattcattcaattcatgatgtatatgctctttat--tagaccacataaatcatttaatgaatgaatctaaaatgtt 24075475  T
Q  157 -atttttgcttataattgtgagcggagg 183  Q
      |||||||||||||| |||| ||||||    
T  24075474 gttttttgcttataatagtgaccggagg 24075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 26243710 - 26243761
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  26243710 attttagattcattcaattaataatgtatatcatctttattatagaccacat 26243761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 29512256 - 29512197
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||| || |||||||||||    
T  29512256 ataagcaaaaatttattttttagatacatttaattaatgatgtatgtggtctttattata 29512197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 47334655 - 47334718
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||| ||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||||||||||    
T  47334655 ttataagcaaaactttgtattttaaattcattcaattaatgatgtatatgatttttattataga 47334718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 7882325 - 7882275
Alignment:
Q  140 aatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  7882325 aatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtac 7882275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 24694360 - 24694294
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| ||||||||||||||  | ||||| ||||||||||||||||||||||||  || |||||||||    
T  24694360 cactattataaacaaaaatcaacatttttgatttatttaattaatgatgtatacaatttttattata 24694294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 38677573 - 38677647
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  38677573 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 38677647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 47650564 - 47650522
Alignment:
Q  66 aacaaaaatttatattttagatttatttaattaatgatgtata 108  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  47650564 aacaaaaatctatattttagatttatttaattaatgttgtata 47650522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 3074905 - 3074836
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||||||| |||||||||| ||| | ||||||||| | |||||||||||| |||| |||||    
T  3074905 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatgatctttattgtagatcacat 3074836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 3648831 - 3648762
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| |||||| ||||| ||||||||||| ||| ||| ||| ||||||||||||  ||||||||||||||    
T  3648831 cactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagtctttattatagac 3648762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 4821508 - 4821439
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| | |||||||| |||||| ||||||| ||| || |||| |||||||||||||||| ||||||||    
T  4821508 ttataagcgaaaatttacattttaaatttattcaatcaacgatgaatatgatctttattattgaccacat 4821439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 34327529 - 34327582
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  34327529 aaaattttgtattttatatttatttaattaatgatgtatatgattttgattata 34327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 51253797 - 51253728
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||||| ||||| |||||| ||| ||| ||| |||||||||| ||||||||||||| ||||    
T  51253797 ttataagcaaaaattaatattgtagattcattcaatcaataatgtatatgaactttattatagacaacat 51253728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 8504897 - 8504845
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  8504897 atgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 8504845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 22497071 - 22496946
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtta-ttttt 162  Q
    ||||| |||| |||||||||| ||| ||||||| | ||||||  ||||||| |||||||||||  |     | ||||||||||||||||| ||| |||||    
T  22497071 caaaactttacattttagattcattcaattaataacgtatattgtctttatcatagaccacatacatcatttaatgaatgaatctaaaatattaattttt 22496972  T
Q  163 gcttataattgtgagcggagggtgta 188  Q
    ||||||||| ||||  ||||||||||    
T  22496971 gcttataatagtgactggagggtgta 22496946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 189
Target Start/End: Complemental strand, 27224707 - 27224574
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt 156  Q
    |||||| ||||||||   |||||||||| ||| | | |||||||||||| || ||||||||||| |||||  |     | |||||| |||||||||||||    
T  27224707 ttataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaatgtt 27224608  T
Q  157 -atttttgcttataattgtgagcggagggtgtac 189  Q
     ||||||| ||||||| |||| ||||||||||||    
T  27224607 gatttttgtttataatagtgaccggagggtgtac 27224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 43599221 - 43599156
Alignment:
Q  69 aaaaatttatattttagatttatttaat----taatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||||||| |||||||||||    ||||||||||||| |||||||||||||| |||||    
T  43599221 aaaattttatattttaaatttatttaattaattaatgatgtatattatctttattatagatcacat 43599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 49412312 - 49412364
Alignment:
Q  75 ttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||||||||  |||||| ||||||||||||| || |||||||||||||||||    
T  49412312 ttatattttaagtttattcaattaatgatgtacataatctttattatagacca 49412364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 54595883 - 54595935
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||  ||||||| |||||||| |||| ||||||||||||    
T  54595883 atgaatgaatctaaaattatatttttacttataatagtgaccggagggtgtac 54595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 4980398 - 4980331
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||| |||||||||||| ||| ||| |||||||||| |  |||||||||||||| ||||    
T  4980398 ataagcaaaaattcatattttagattcattcaataaatgatgtatgtagtctttattatagacaacat 4980331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 41743722 - 41743651
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| ||||||  |||| |||| ||||| |||| ||| | ||||||||||||||| ||||||||||||||||    
T  41743722 cactattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagacca 41743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 42930110 - 42930160
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||| ||||||||| |||||||||||||| |||| |||||||||||    
T  42930110 atgaatgaatttaaaatgtt-tttttgcttataatagtgatcggagggtgta 42930160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 1752348 - 1752386
Alignment:
Q  59 tgttataaacaaaaatttatattttagatttatttaatt 97  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  1752348 tgttatagacaaaaatttatattttagatttattgaatt 1752386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 8504858 - 8504932
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||| ||||| | ||| |||||||||||||||||||    
T  8504858 cactattataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattatagaccacat 8504932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 9170157 - 9170107
Alignment:
Q  139 gaatgaatctaaaatgttattttt-gcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||| |||||| ||||||||| |||| |||||||||||    
T  9170157 gaatgaatctaaaatgtaattttttgcttataatagtgaccggagggtgta 9170107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 20619004 - 20619062
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    ||||||||||||||||| |||||  ||| ||| |||||||||| |||||| ||||||||    
T  20619004 ttataaacaaaaatttacattttgcattcattcaattaatgatatatatggtctttatt 20619062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 30519691 - 30519745
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtaca 190  Q
    ||||||||||||||||||||  |||||||||||||| |||| | |||||||||||    
T  30519691 atgaatgaatctaaaatgttggtttttgcttataatagtgaccagagggtgtaca 30519745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 38677612 - 38677558
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgtaca 190  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||||    
T  38677612 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtaca 38677558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 52866541 - 52866475
Alignment:
Q  64 taaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||| | |||||||||| ||| | | ||| || ||||| ||||||||||||||||||||    
T  52866541 taaacaaaaattaacattttagattcattcattaaataatatatataatctttattatagaccacat 52866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 54783468 - 54783384
Alignment:
Q  97 taatgatgtatatgatctttattatagaccacat---ttaa-tgatgaatgaatctaaaatgtt-atttttgcttataattgtga 176  Q
    |||||||||||| |||||||||||||||||||||   | || | || ||||||||||||||||| ||||||| ||||||| ||||    
T  54783468 taatgatgtataagatctttattatagaccacatacatcaattaattaatgaatctaaaatgttaatttttgtttataatagtga 54783384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 7829140 - 7829189
Alignment:
Q  141 atgaatctaaaatgttattttt-gcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||| |||| ||||||||| |||| ||||||||||||    
T  7829140 atgaatctaaaatgttaattttagcttataatagtgatcggagggtgtac 7829189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 7981271 - 7981230
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgat 103  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||    
T  7981271 tataagcaaaaatttatattttagatttattcaataaatgat 7981230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 38455291 - 38455246
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    ||||||||||||||||  ||||||||  ||||||||||||||||||    
T  38455291 tataaacaaaaatttactttttagatacatttaattaatgatgtat 38455246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 40639802 - 40639851
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggt 185  Q
    |||||||||| |||||||||| |||||||||||||| |||| ||||||||    
T  40639802 atgaatgaatttaaaatgttaatttttgcttataatagtgaccggagggt 40639851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 48191762 - 48191709
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||||| ||||||| ||||||| |||| |||||| |||||    
T  48191762 atgaatgaatctaaaatgttaatttttgtttataatagtgaccggaggatgtac 48191709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 50745093 - 50745032
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||| ||||||||| |||||| |||  |||||||||||||||||||  | |||||||||    
T  50745093 ttataaataaaaatttacattttatattcgtttaattaatgatgtatatagtatttattata 50745032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 53638424 - 53638469
Alignment:
Q  81 tttagatttatttaattaatgatgtatatgatctttattatagacc 126  Q
    |||| |||||||||||||||||| |||||  |||||||||||||||    
T  53638424 tttaaatttatttaattaatgatatatattgtctttattatagacc 53638469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 54595899 - 54595797
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt-atttttgcttataattg 173  Q
    |||||||||| ||| | | ||||||||||||  |||||||||| ||||||||  |     | |||||||||||||||||||| ||||||||||||||| |    
T  54595899 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 54595800  T
Q  174 tga 176  Q
    |||    
T  54595799 tga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 8439384 - 8439316
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||||| ||||||||||| || ||| | ||||||||| | ||  |||||||||||||||||||    
T  8439384 tataagcaaaaaattatattttaggttcattcatttaatgatgcacatagtctttattatagaccacat 8439316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 12047370 - 12047303
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||||  ||| |||||||||||||| | ||||||||| | ||| |||||||||||||||||||    
T  12047370 tataagcaaaagattacattttagatttattcatttaatgatgcacatg-tctttattatagaccacat 12047303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 12744947 - 12744899
Alignment:
Q  138 tgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggt 185  Q
    |||||||||||||||||| | |||||||||||||| |||| ||||||||    
T  12744947 tgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagggt 12744899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 28939510 - 28939538
Alignment:
Q  69 aaaaatttatattttagatttatttaatt 97  Q
    |||||||||||||||||||||||||||||    
T  28939510 aaaaatttatattttagatttatttaatt 28939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 53683901 - 53683841
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||| ||| |||||| ||| |||||||||||||| || ||||||||||| |||||||    
T  53683901 aaaaattacattctagattcattcaattaatgatgtatgtggtctttattatataccacat 53683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 26477293 - 26477222
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  26477293 cactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaacca 26477222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 26553733 - 26553662
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  26553733 cactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaacca 26553662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 10095828 - 10095714
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtta-tttttgcttataattg 173  Q
    |||||||||||||||| ||||| ||||||||| ||||||| |||||||||||  |     | ||||||||||||||||||||| |||||||||||||| |    
T  10095828 attttagatttatttatttaattatgtatatggtctttatcatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 10095729  T
Q  174 tgagcggagggtgta 188  Q
    ||| |||||||||||    
T  10095728 tgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 3882820 - 3882949
Alignment:
Q  61 ttataaacaaaaatttatattttagatttat----ttaattaatgatgtatatgatctttattatagaccacat--ttaat--gatgaatgaatctaaaa 152  Q
    ||||||||||||||| |||||||||||| ||    |||||||||||||||| |  |||||||||||||||||||   ||||   ||||||||||||||||    
T  3882820 ttataaacaaaaattaatattttagattcattcaattaattaatgatgtatttagtctttattatagaccacatacataattcaatgaatgaatctaaaa 3882919  T
Q  153 tgttatttttgcttataattgtgagcggag 182  Q
    ||||  ||||| |||||||||||| |||||    
T  3882920 tgttgattttggttataattgtgaccggag 3882949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 21586925 - 21586872
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  21586925 atattttagattcattcaattaatgatgtatatgatctttattatagaccacat 21586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 30138920 - 30138847
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccaca 129  Q
    |||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  30138920 cactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccaca 30138847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 31813419 - 31813488
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||| |||||||||    
T  31813419 cactattataaacaaaaatttacattttagattcattcaattaatgatgtatatggtcttcattatagac 31813488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 46495494 - 46495426
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||| || |||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  46495494 tataaataaaaatatacattttaaatttatttaattaatgatgtatattatctttattatagactacat 46495426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 6847284 - 6847389
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaa 151  Q
    |||| |||||| |||||||||  |||||| ||||||| |||||||||||||||||||||||||||| || |||||   |||  | |||||||||||||||    
T  6847284 cactattataagcaaaaatttgcattttatatttattcaattaatgatgtatatgatctttattatggaacacatacataatttaatgaatgaatctaaa 6847383  T
Q  152 atgtta 157  Q
    ||||||    
T  6847384 atgtta 6847389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 26385745 - 26385683
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| |||| ||||| |||||||||||||||||| || |||||||||||||||||||    
T  26385745 caaaaatttacatttaagattcatttaattaatgatgtatgtggtctttattatagaccacat 26385683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 26904801 - 26904863
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||||  || ||| ||||||||||||||| |||||||||||||||||||||    
T  26904801 caaaaatttatattttactttcattcaattaatgatgtatacgatctttattatagaccacat 26904863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 6455557 - 6455694
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatcta 149  Q
    |||| |||||| |||||||||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||      ||||  ||||||||| |||    
T  6455557 cactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaa--atgaatgaaccta 6455654  T
Q  150 aaatgt-tatttttgcttataattgtgagcggagggtgta 188  Q
    ||||||  ||||||||||||| | |||| |||||||||||    
T  6455655 aaatgtagatttttgcttatattagtgatcggagggtgta 6455694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 9930401 - 9930454
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 114  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  9930401 ttataaacaaaaatttatattttagattcatttaattaattatgtatataatct 9930454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 2943344 - 2943207
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 151  Q
    |||| |||||| |||||| |||||||||| ||| ||| ||||||| |||||| |  |||||||| ||||||||||  |     | |||||||||||||||    
T  2943344 cactattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatgaatctaaa 2943245  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| || ||||||||    
T  2943244 atgttgatttttgcttataatagtgaccgaagggtgta 2943207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 43103204 - 43103067
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac----cacatttaatgatgaatgaatctaaa 151  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||| || |||| ||||| |     ||||    | || ||||||| ||||    
T  43103204 cactattataagtaaaattttatattttagatttatttaattaatgatgtatataatttttaatatagtctgcatacatcatttaataaatgaatttaaa 43103105  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  43103104 atgttaatttttgcttataatagtgaccggagggtgta 43103067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 45985589 - 45985635
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatag 123  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45985589 atattttaggtttatttaattaatgatgtatatgatatttattatag 45985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 45989949 - 45989995
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatag 123  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45989949 atattttaggtttatttaattaatgatgtatatgatatttattatag 45989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 4089909 - 4089856
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattat 121  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||    
T  4089909 caaaaatttatattttatattcattcaattaatgatgtatatggtctttattat 4089856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 5950287 - 5950340
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  5950287 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgtac 5950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 32549940 - 32549879
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||||||||||| ||| ||| |||||||||| ||||||||| ||||||||||||    
T  32549940 aaaaattgatattttagattcattcaataaatgatgtatgtgatctttaatatagaccacat 32549879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 45531962 - 45532031
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||||  | ||||||||| |||||||    
T  45531962 ttataaataaaaatttatattttagattaatttaattactaatgtatatagtttttattatacaccacat 45532031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 21096288 - 21096199
Alignment:
Q  87 tttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataat 171  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||     | |||||| |||||||||| || |||||||||||||||    
T  21096288 tttatttaattaatgatgtatatgatatttattatagatcacatatattatttaatgaataaatctaaaatattaatttttgcttataat 21096199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 25245236 - 25245288
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  25245236 atgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 25245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 27554511 - 27554571
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||||||| ||||||||  ||| |||||||||||||| ||||||||||||||    
T  27554511 tataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattata 27554571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 41803730 - 41803801
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| ||||||  |||||| || |||||||||||||||| ||||||||| | ||| ||||||||||||||||    
T  41803730 cactattataacaaaaaatctacattttagatttatttatttaatgatgcacatggtctttattatagacca 41803801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 3882560 - 3882697
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| ||||||| ||||||| | |||||||||| ||| |||||||| ||||| | ||||| |||||||||||||| ||     | |||||||||||||||    
T  3882560 cactattataaa-aaaaattaacattttagattcattcaattaatggtgtatttaatcttgattatagaccacatatataatttaatgaatgaatctaaa 3882658  T
Q  152 atgtta--tttttgcttataattgtgagcggagggtgta 188  Q
    ||| ||  ||||| |||||||| |||| |||| ||||||    
T  3882659 atgatattttttttcttataatagtgatcggatggtgta 3882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 24280953 - 24280879
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  |||||| || |||||| ||| ||| |||||||||||||||| || |||||||||||||||||    
T  24280953 cactattataagtaaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacat 24280879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 29205320 - 29205394
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||  |||||||  ||| ||| |||||||||||||||||||||||||||| || |||||    
T  29205320 cactattataagcaaaaatcaatattttttattcattaaattaatgatgtatatgatctttattatcgatcacat 29205394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 32490602 - 32490648
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  32490602 ttataaacaaaactttacattttagattcatttaattaatgatgtat 32490648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 21886480 - 21886525
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgta 106  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  21886480 ttataagcaaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 35238976 - 35239021
Alignment:
Q  85 gatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  35238976 gatttaattaattaataatgtatatgatctttattacagaccacat 35239021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 39960369 - 39960296
Alignment:
Q  57 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||||||| ||| |  | ||||||||| |||||||    
T  39960369 actgttataaataaaaatttatattttaaattcattcaattaatgatatatgtagtttttattataaaccacat 39960296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 44416658 - 44416613
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  44416658 tataaacaaaaatttatattttagattcattcaattaattatgtat 44416613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 6455596 - 6455544
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| | |||||||||||||| |||| |||||||||||    
T  6455596 atgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgta 6455544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 22106681 - 22106741
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||| ||| |||||||| |||| |||||||||||||| || |||||||||||    
T  22106681 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattata 22106741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 31663046 - 31663106
Alignment:
Q  58 ctgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttat 118  Q
    |||||||||| ||||||| | |||||||||| ||| |||||||||||| |||||| |||||    
T  31663046 ctgttataaataaaaattaaaattttagattaattcaattaatgatgtttatgatatttat 31663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 35641489 - 35641537
Alignment:
Q  59 tgttataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||||||||||||||||||||||| ||| ||| ||| ||||||||||    
T  35641489 tgttataaacaaaaatttatattttacattcattcaataaatgatgtat 35641537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 40529670 - 40529610
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||| ||| |||||||| |||| |||||||||||||| || |||||||||||    
T  40529670 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattata 40529610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 41106099 - 41106163
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||||| ||||||||| ||| ||||||||||| |||||||| || ||| ||||| ||||    
T  41106099 ataaacaaaaatctatattttaaattcatttaattaataatgtatataatatttgttatatacca 41106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 8447849 - 8447778
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| ||||||| || |||||||||| ||| | | ||||||| | ||||||||||||||||||||    
T  8447849 cactattataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagacca 8447778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 23797457 - 23797406
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||| |||||||||||||| || |||||||||||||| ||||    
T  23797457 attttagattcattcaattaatgatgtatctggtctttattatagactacat 23797406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 2533953 - 2533999
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||| ||||||||||||||||||||||||| |||  |||||||||    
T  2533953 ttataagcaaaaatttatattttagatttattcaatagatgatgtat 2533999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 18534916 - 18534950
Alignment:
Q  96 ttaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| |||||||||||||||||||||||    
T  18534916 ttaatgatgtacatgatctttattatagaccacat 18534950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 26385633 - 26385707
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| ||||| |||||||||| ||| ||| ||| |||||| || ||| || || |||||||||    
T  26385633 cactgttataaacaaagatttacattttagattcattcaataaattatgtatgtggtctataataaagaccacat 26385707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 27942357 - 27942407
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||| |||||||    
T  27942357 ttttagattcattcaattaatgatgtatatgatccatattataaaccacat 27942407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 44819672 - 44819730
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 114  Q
    |||| |||||||||||||| ||| ||||||||||||| ||| |||||| || |||||||    
T  44819672 cactattataaacaaaaatgtattttttagatttattaaataaatgatatacatgatct 44819730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 716360 - 716303
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| |||||||||||    
T  716360 tataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttatt 716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 5084539 - 5084494
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||| ||| ||| |||||||||||||||| ||||||||||||||    
T  5084539 attttatattaattcaattaatgatgtatattatctttattataga 5084494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 7716346 - 7716290
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatc 113  Q
    ||||||||||||||||||||||| |||||||||  || ||| ||| ||||||||||||    
T  7716346 cactgttataaacaaaaatttat-ttttagattcgttcaatcaattatgtatatgatc 7716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 9555281 - 9555342
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||| |||||| ||||||| ||||||||||||||||  ||||||| ||| |||||||    
T  9555281 aaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacat 9555342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 18113264 - 18113317
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  18113264 atattttagattaattcatttaatgatgcaaatggtctttattatagaccacat 18113317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 22281457 - 22281506
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatga 111  Q
    ||||||||||||| ||  |||||||| |||| ||||||||||||||||||    
T  22281457 tataaacaaaaatctaatttttagatatattcaattaatgatgtatatga 22281506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 35216490 - 35216531
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgat 103  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||    
T  35216490 tataaacaaaaatttatattttagattcattcaataaatgat 35216531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 39013142 - 39013089
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctt 115  Q
    |||||||||||||| | |||||| ||| |||||||||||||  |||||||||||    
T  39013142 tataaacaaaaattaacattttaaattcatttaattaatgacatatatgatctt 39013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 39136612 - 39136649
Alignment:
Q  94 aattaatgatgtatatgatctttattatagaccacatt 131  Q
    |||||||||||||||| || ||||||||||||||||||    
T  39136612 aattaatgatgtatataatatttattatagaccacatt 39136649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 43130246 - 43130307
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||| |||||| ||  ||||||||| ||| |||||||||||||||| || |||||||||    
T  43130246 ttataaataaaaatctacgttttagattcattcaattaatgatgtatataatttttattata 43130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 1706959 - 1706899
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| || ||||||||  ||| | ||||||||||||||| |||||||||||    
T  1706959 tataagcaaaaattcattttttagatacattcatttaatgatgtatatggtctttattata 1706899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 8447810 - 8447862
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||  ||||||||||||||| |||| || ||||||||    
T  8447810 atgaatgaatctaaaatgtagatttttgcttataatagtgaccgaagggtgta 8447862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 18654660 - 18654624
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatg 110  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  18654660 tttattttttagatttatttaataaatgatgtatatg 18654624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 23818471 - 23818431
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtga 176  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  23818471 atgaatgaatctaaaatgttgatttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 24353813 - 24353857
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgt 105  Q
    ||||||||||||||| | |||||| ||||||||||| ||||||||    
T  24353813 ttataaacaaaaattcacattttaaatttatttaataaatgatgt 24353857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 24936659 - 24936599
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| ||||||| |  |||||||| |||| |||||||||||||| || |||||||||||    
T  24936659 tataaataaaaattcactttttagatatattcaattaatgatgtatgtggtctttattata 24936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 29498797 - 29498857
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||  | ||||||||| |||| |||||||||||||| || |||||||||||    
T  29498797 tataagcaaaaatccacattttagatatattcaattaatgatgtatgtggtctttattata 29498857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 34703569 - 34703509
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| |  ||||||||  ||| ||||||||||||||||| |||||||||||    
T  34703569 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 34703509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 40417032 - 40416972
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| |  ||||||||  ||| ||||||||||||||||| |||||||||||    
T  40417032 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 40416972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 41404062 - 41404010
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||| || |||||||||||||| |||| |||||| ||||    
T  41404062 atgaatgaatctaaaatgataatttttgcttataatagtgaccggaggatgta 41404010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 40952475 - 40952350
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 156  Q
    |||||| ||||||||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||||| ||     | ||||||||||||||||||||    
T  40952475 ttataagcaaaaatttatattttagattcattcaattaaatatgtatatgatttttattatagaccacatatatcatttaatgaatgaatctaaaatgtt 40952376  T
Q  157 -atttttgcttataattgtgagcgga 181  Q
     ||| ||||||||||| |||| ||||    
T  40952375 gattattgcttataatagtgaacgga 40952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 3511723 - 3511792
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt 131  Q
    ||||| ||||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3511723 tataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacatt 3511792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 4708655 - 4708594
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  4708655 aaaaatttatattttaaattcatttaattaataatgtatatgatctttattatagaccacat 4708594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 10572840 - 10572779
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10572840 aaaaacttatattatagatttattcaattaatgatgtatatgatctttattatagaccacat 10572779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 19878405 - 19878300
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttg 163  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||||||  |     | |||||||||||||||||||| |||||||    
T  19878405 aaaaatttacattttaaattcatttaattaatgatgtatatgatctttattatagtccacatacatcgtttaatgaatgaatctaaaatgttaatttttg 19878306  T
Q  164 cttata 169  Q
    ||||||    
T  19878305 cttata 19878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 4406368 - 4406236
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 156  Q
    |||||| |||||||||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||  |     | |||||| |||||||||||||    
T  4406368 ttataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgtt 4406269  T
Q  157 -atttttgcttataattgtgagcggagggtgta 188  Q
     |||||| |||||||| |||| |||| ||||||    
T  4406268 gatttttacttataatagtgaccggatggtgta 4406236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 48603572 - 48603646
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  48603572 cactattataagcaagaatctatattttagatttattcaattaatgatgcatatgatctttattatagatcacat 48603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 5816552 - 5816621
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  5816552 ttataagcaaaactttgtattttaaattcatttaattaatgatgtatatgatctttattatagatcacat 5816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 18423913 - 18423966
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatatgatctttattata 18423966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 21142217 - 21142156
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  21142217 ttataagcaaaagtttatattttagattcatttaattaatgatgtatatggtctttattata 21142156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 18626824 - 18626716
Alignment:
Q  71 aaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgttatttttgctt 166  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||  |     | ||||||||||||||||| | ||||||||||    
T  18626824 aaatttacattttagatttattcaattaatgatgcatatgatctttattataaaccacatacatcatttaatgaatgaatctaaaat-taatttttgctt 18626726  T
Q  167 ataattgtga 176  Q
    ||||| ||||    
T  18626725 ataatagtga 18626716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 36786163 - 36786292
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 156  Q
    ||||||||||||||  | |||||||||| ||| ||||||||||||||||  ||||||||||| |||||||  |     ||||||||||||| ||||| ||    
T  36786163 ttataaacaaaaatcaacattttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcatttgatgaatgaatccaaaatatt 36786262  T
Q  157 -atttttgcttataattgtgagcggagggt 185  Q
     ||||||||||||||| |||| ||||||||    
T  36786263 gatttttgcttataatagtgaccggagggt 36786292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 7740617 - 7740554
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||| ||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  7740617 ttataagcaaaaatttatattttaaattcattaaattaatgatgtatgtgatctttattataga 7740554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 32599488 - 32599562
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||  ||||||||| ||||||| ||||||| ||||||||| ||||||||||| |||||||    
T  32599488 cactattataaacaaaaaactatattttatatttattaaattaattatgtatatggtctttattataaaccacat 32599562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 38298110 - 38298172
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  38298110 caaaattttatattttagattcattcaattaatgatgtatatggtctttattataaaccacat 38298172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 48414979 - 48414914
Alignment:
Q  65 aaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| || |||||||||||||| | ||||||||| | |||||||||||||||||||||||    
T  48414979 aaacaaaaatctacattttagatttattcatttaatgatgcacatgatctttattatagaccacat 48414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 22493590 - 22493658
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||| |||| | |||||||| |||| |||||||||||| ||||||||||||| |||||    
T  22493590 tataaacaaaaatttgtattatggatttattcaattgatgatgtatatggtctttattatagatcacat 22493658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 24798135 - 24798207
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||| ||||||  ||||||||| |||||| ||||||| | |||||| ||||||||||||||||||||||||||    
T  24798135 cactattataagtaaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccac 24798207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 40814698 - 40814815
Alignment:
Q  77 atattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-atttttgcttataat 171  Q
    |||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| ||     | |||||||||||||||||||| ||||||| ||||||     
T  40814698 atattttagattcattcaactaatgatatatatgatctttattataaaccacatatatcatttaatgaatgaatctaaaatgttaatttttgtttataac 40814797  T
Q  172 tgtgagcggagggtgtac 189  Q
     |||| || |||||||||    
T  40814798 agtgaccgaagggtgtac 40814815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 49231300 - 49231360
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  49231300 aaaatctatattttaaattcatttaattaatgatatatatgatctttattgtagaccacat 49231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 50686119 - 50686063
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  50686119 tttatattttagattcattcaattaacgatgtatatgatctttattatagatcacat 50686063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 4484105 - 4484156
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  4484105 attttagattcattcaattaatgatgtatatggtctttattatagaccacat 4484156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 7215606 - 7215547
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattat 121  Q
    ||||||||||||||||||||||| |||  || ||||||||||| ||||||||||||||||    
T  7215606 tataaacaaaaatttatattttaaattcgttcaattaatgatgcatatgatctttattat 7215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 23071427 - 23071485
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||||||||||||| ||| | ||||||||| | ||||||||||||||||||||    
T  23071427 aaaaatttatattttagattcattcatttaatgatgcacatgatctttattatagacca 23071485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 33693982 - 33694114
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaa-tgt 155  Q
    |||||| ||||| |||  ||||||||||  || ||||||||||||||||| |||||||||||||||||||   |||  | ||||||||| |||||| | |    
T  33693982 ttataagcaaaattttgcattttagattcgttcaattaatgatgtatatggtctttattatagaccacatacataatttaatgaatgaacctaaaattat 33694081  T
Q  156 tatttttgcttataattgtgagcggagggtgta 188  Q
    | |||||||||||||| ||||  ||||||||||    
T  33694082 tttttttgcttataatagtgactggagggtgta 33694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 48995567 - 48995625
Alignment:
Q  59 tgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatcttta 117  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||||||    
T  48995567 tgttataaacaaaattttatattttagattcatttaataaataatgtatgtgatcttta 48995625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 55416321 - 55416380
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||| ||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  55416321 aaaaatttatatttgagattcattcaattaatgatgtatatg--ctttattatagaccacat 55416380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 16170923 - 16170992
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||| |||| |||||||||| ||| |||||||| |||||||| |||||||||||||| ||||    
T  16170923 ttataaaaaaaactttacattttagattcattcaattaatggtgtatatggtctttattatagactacat 16170992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 21113119 - 21113050
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||| || |||||| |||  ||||||||||||||||||| || ||||||||| |||||||    
T  21113119 ttataaacaaaaatctacattttatattcgtttaattaatgatgtatattatttttattatataccacat 21113050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 23004059 - 23003976
Alignment:
Q  91 tttaattaatgatgtatatgatctttattatagaccacat---tta-atgatgaatgaatctaaaatgtt-atttttgcttata 169  Q
    ||||||||||||||||||||||||||||||||||| ||||   |||  | ||||| |||||||||||||| |||||||||||||    
T  23004059 tttaattaatgatgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgttaatttttgcttata 23003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 53176440 - 53176298
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||||||||||||||||| ||| | |||||| ||||| |||||||| ||||| |  ||||  |     | |||||||||| ||||    
T  53176440 cactattataagcaaaaatttatattttagattcattcagttaatgttgtatttgatcttttttataaataacatacatcatttaatgaatgaatataaa 53176341  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgtacaaac 193  Q
    ||||| |||||| |||||||| |||| ||||||||||| ||||    
T  53176340 atgttaatttttacttataatagtgatcggagggtgtaaaaac 53176298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 54106601 - 54106470
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat---ttaatga-tgaatgaatctaaaatgt-t 156  Q
    ||||| ||||||||||| ||||||||| ||| ||| |||||||||| ||||||||||| ||||| ||||   | | | | |||||||||||||||| |      
T  54106601 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaatctaaaatatga 54106502  T
Q  157 atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||| |||||| ||||| |||||    
T  54106501 atttttgcttatatttgtgaccggagagtgta 54106470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 21649462 - 21649391
Alignment:
Q  61 ttataaacaaaaatttatattttagatt--tatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||| | ||||||||| |||  |||| ||||||||||||| |||||||||||||||||||||||    
T  21649462 ttataagcaaaattctatattttaaattcatattcaattaatgatgtacatgatctttattatagaccacat 21649391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 24448687 - 24448739
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  24448687 aaaatttatattttatattcatttaattaatgatgtatatagtctttattata 24448739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 35151793 - 35151725
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||| |||||||||||| ||| ||||||||||| ||| |||| |||||||||||  |||||||||||||    
T  35151793 cactattataaacaaaactttgtattttagattcattcaattgatgatgtatatagtctttattataga 35151725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 39533776 - 39533901
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-attttt 162  Q
    |||||||| | |||||||||| ||||| | |||||||||||| |||||||||||||| |||||  |     | |||||| ||||||||||||| ||||||    
T  39533776 caaaaattaacattttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgttgattttt 39533875  T
Q  163 gcttataattgtgagcggagggtgta 188  Q
    |||||||||  ||| || ||||||||    
T  39533876 gcttataataatgaccgtagggtgta 39533901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 44239910 - 44239842
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||| ||||| ||| ||  ||| |||||||||||||||||||| ||||||| ||||    
T  44239910 tataaacaaaaatttatgttttaaattcatccaataaatgatgtatatgatctttagtatagacaacat 44239842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 51829180 - 51829244
Alignment:
Q  56 cactgttataaaca-aaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    |||||||||||| | ||||| || |||||| ||||||||||||||||||||||| ||||||||||    
T  51829180 cactgttataaaaataaaatctacattttaaatttatttaattaatgatgtatacgatctttatt 51829244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 8826974 - 8826923
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  8826974 attttagattcatttatttaatgatgtatatggtctttattatagatcacat 8826923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 10308243 - 10308322
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatt-----tatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||| |||||||||||||||      ||| ||||||||||||||||  |||||||||||||||||||    
T  10308243 cactgttataagcaaaactttatattttagattcattcaattaaattaatgatgtatatagtctttattatagaccacat 10308322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 41346475 - 41346542
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatag 123  Q
    |||| ||||||  |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||    
T  41346475 cactattataagtaaaaatttatattttagattcatttatttaatgatgcacatggtctttattatag 41346542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 12070125 - 12070059
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||||||  |||||  ||||||||||||||||||||||||| || ||||| || |||||||||    
T  12070125 cactgttataagtaaaaaactatattttagatttatttaattaataatatatataatatttattata 12070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 16468336 - 16468262
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  |||||| || |||||||||||||| | ||||||||  | |||||||||||||||||||||||    
T  16468336 cactattataataaaaaatctacattttagatttattcatttaatgattcacatgatctttattatagaccacat 16468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 23568473 - 23568523
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtg 186  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  23568473 atgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtg 23568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 35425265 - 35425327
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatag 123  Q
    |||||| ||||| |||| |||||||||| ||| | ||||||||||||||| ||||||||||||    
T  35425265 ttataagcaaaactttaaattttagattcattcatttaatgatgtatatggtctttattatag 35425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 36072578 - 36072652
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||  |||||||||| ||| |||| |||||||||||| |||||||||||||| ||||    
T  36072578 cactattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacat 36072652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 38539486 - 38539540
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    |||| |||||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  38539486 cactattataagcaaaaatttatattttaaatttattcaataaatgatgtatatg 38539540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 46803420 - 46803490
Alignment:
Q  61 ttataaacaaaaatt-tatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||| ||||||||  ||||||||||| |||||||    
T  46803420 ttataaataaaaattatatattttagattcattaaattaattatgtatatagtctttattataaaccacat 46803490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 49481888 - 49481962
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  49481888 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 49481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 16203472 - 16203427
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatg 101  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||    
T  16203472 cactattataaacaaaaatttacattttagatttatttatttaatg 16203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 24133620 - 24133677
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||| |||||||||||| |||| |||||||||| ||||| |||||||||||| ||||    
T  24133620 aaaatctatattttagatatattcaattaatgatatatataatctttattataaacca 24133677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 40575966 - 40575905
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||| || |||| | |||||||||||||| ||||||| ||||||||||| |||||||||    
T  40575966 ttataaataataattaacattttagatttattcaattaataatgtatatgatttttattata 40575905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 40881534 - 40881493
Alignment:
Q  81 tttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  40881534 tttagattcattcaattaatgatgtatatgatctttattata 40881493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 54931840 - 54931893
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| |||||||||    
T  54931840 aaaaatctatattttaaatttattcaattaattatgtatatgatttttattata 54931893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 14451004 - 14450952
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  14451004 atgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgta 14450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 19597065 - 19597009
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    |||| |||||||||||||||||||| ||||||| ||| || ||||||||||| ||||    
T  19597065 cactattataaacaaaaatttatatattagattaattcaactaatgatgtatgtgat 19597009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 25138691 - 25138763
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||| |||||| ||||| ||| |||| |||||| ||  ||||||||||||||||  |||||||||||||||||    
T  25138691 cactattataagcaaaactttgtattatagattcatgcaattaatgatgtatattgtctttattatagaccac 25138763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 30035209 - 30035261
Alignment:
Q  76 tatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    ||||||||||| | ||||||||||  |||||||||||||||||||| ||||||    
T  30035209 tatattttagactcatttaattaagtatgtatatgatctttattatcgaccac 30035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 54713145 - 54713093
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| | |||||||||||||| |||| |||||||||||    
T  54713145 atgaatgaatctaaaatgtaaatttttgcttataatagtgaccggagggtgta 54713093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 4370414 - 4370477
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    ||||| |||||||  |||||||||||| ||| ||| ||||||||||||| |||||||| |||||    
T  4370414 tataagcaaaaatccatattttagattcattcaataaatgatgtatatggtctttattgtagac 4370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 8826873 - 8826944
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||||||||||||| ||||||| ||||||| | | |||||||||| |||||| || || ||||||    
T  8826873 cactattataaacaaaaatttgtattttaaatttattcattaaatgatgtatgtgatctataataaagacca 8826944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 19595430 - 19595481
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    ||||||| | |||||||||||||||||| ||||||| |||||||||| ||||    
T  19595430 ttataaatagaaatttatattttagattcatttaataaatgatgtatgtgat 19595481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 51232302 - 51232353
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| || ||||| ||||||||| | |||||||||||||||||||||||    
T  51232302 attttaggttcatttatttaatgatgcacatgatctttattatagaccacat 51232353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 3094275 - 3094329
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    |||| |||||||||||||||||| ||||| ||| ||| ||| |||||||||||||    
T  3094275 cactattataaacaaaaatttattttttatattcattcaataaatgatgtatatg 3094329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 6462844 - 6462786
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatct 114  Q
    |||| |||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||    
T  6462844 cactattataaacaaaattttattttttagattcattcaataaatgatgtatgtgatct 6462786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 14450965 - 14451039
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| ||||||||||||| |||||    
T  14450965 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagatcacat 14451039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 37175464 - 37175514
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||||||||||||||| |||| | |||||| ||||||||    
T  37175464 ttttaggtttatttaattaatgatgtatgtgatttatattatggaccacat 37175514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 1829674 - 1829613
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||| |||  || |||||||||| ||||||| ||||||||||||| ||| |||||||    
T  1829674 ttataaacataaaactacattttagattcatttaataaatgatgtatatgttctatattata 1829613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 3504091 - 3504136
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||||||||||| || ||||||||| ||| ||||||||||||||    
T  3504091 tataaacaaaaattcattttttagattcattcaattaatgatgtat 3504136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 19878194 - 19878145
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggt 185  Q
    |||||||||||||||||||| ||||||||||||| | |||| ||||||||    
T  19878194 atgaatgaatctaaaatgttaatttttgcttatattagtgaccggagggt 19878145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 21884145 - 21884013
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 155  Q
    ||||| ||||||  |||||||||| || ||| | ||||||||| | ||| |||||||||||||||||||      ||||  ||||||||| |||||||||    
T  21884145 tataagcaaaaaactatattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaa--atgaatgaacctaaaatgt 21884048  T
Q  156 --tatttttgcttataattgtgagcggagggtgta 188  Q
      | |||||||||||| | |||| |||||||||||    
T  21884047 agtttttttgcttatattagtgaccggagggtgta 21884013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 26920781 - 26920732
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  26920781 attttagattcattcaattaatgatgtacatcgtctttattatagaccac 26920732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 27537069 - 27537130
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| |||||||||| |||||||||| ||| | | |||||||||  ||||||||||||||    
T  27537069 ttataagcaaaaatttacattttagattcattcattaaatgatgtaagtgatctttattata 27537130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 33558923 - 33558866
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    ||||| ||||||| ||| ||||||||||||| ||| |||||||||| || ||||||||    
T  33558923 tataagcaaaaatatatgttttagatttattcaataaatgatgtatgtggtctttatt 33558866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 41654614 - 41654561
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||||||| ||| |  |||||||||||||||| ||||||||||||||    
T  41654614 tttacattttagattcattaacgtaatgatgtatatgatatttattatagacca 41654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 47397893 - 47397962
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| || ||||| ||||||||||||| ||| ||| || ||| |||||| ||| |||||||||||    
T  47397893 ttataaacagaattttattttttagatttattcaataaataatatatgtgatctatataatagaccacat 47397962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 52674830 - 52674875
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    ||||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  52674830 tataaacaaaaatttatattttaaattcatttaataaattatgtat 52674875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 54508183 - 54508228
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    ||||| ||||||||||||||||||||| ||| ||| ||||||||||    
T  54508183 tataagcaaaaatttatattttagattcattcaataaatgatgtat 54508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 56328576 - 56328444
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 155  Q
    ||||| ||||||  || |||||||||| ||| | ||||||||| ||||  |||||||||||||||||||      ||||  ||||||||| |||||||||    
T  56328576 tataagcaaaaaactacattttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaa--atgaatgaacctaaaatgt 56328479  T
Q  156 --tatttttgcttataattgtgagcggagggtgta 188  Q
      | |||||||||||| | |||| |||||||||||    
T  56328478 agtttttttgcttatattagtgaccggagggtgta 56328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 5418641 - 5418581
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| || |||||||||||    
T  5418641 tataagcaaaaatttactttttagatacattgaattaatgatgtatgtggtctttattata 5418581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 18424024 - 18423968
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    |||| ||||||||||||||  |||| ||||||||||| | | |||||||||||||||    
T  18424024 cactattataaacaaaaataaatatattagatttattcattaaatgatgtatatgat 18423968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 26863106 - 26863162
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    |||| |||||||||||||||||||||||| ||| ||| ||| | |||||||| ||||    
T  26863106 cactattataaacaaaaatttatattttaaattcattgaataattgatgtatctgat 26863162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 36786196 - 36786144
Alignment:
Q  138 tgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||| ||||||| ||||||| | || ||||||||||||    
T  36786196 tgaatgaatctaaaatgttgatttttgtttataatagggaccggagggtgtac 36786144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 39235227 - 39235195
Alignment:
Q  98 aatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||||||||||||| |||||||    
T  39235227 aatgatgtatatgatctttattataaaccacat 39235195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 47308161 - 47308109
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||| |||||||| ||||||||||||||| |||| || ||||||||    
T  47308161 atgaatgaatccaaaatgttgatttttgcttataatagtgatcgaagggtgta 47308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 52256856 - 52256800
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||||| ||||||||||||||||||||| ||||   ||||||| |||||||    
T  52256856 tttattttttaggtttatttaattaatgatgtatgtgattcatattataaaccacat 52256800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 55936034 - 55935982
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||  | |||||||||||||| |||| |||||| |||||    
T  55936034 atgaatgaatctaaaattatgtttttgcttataatagtgaccggaggatgtac 55935982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 89721 - 89610
Alignment:
Q  65 aaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt-att 159  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||  |     | ||||| |||||||||||||| |||    
T  89721 aaacaaaaatttacattttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttgatt 89622  T
Q  160 tttgcttataat 171  Q
    ||||||||||||    
T  89621 tttgcttataat 89610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 10117102 - 10117028
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  10117102 cactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacat 10117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18603467 - 18603540
Alignment:
Q  57 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||| || | |||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  18603467 actgttataaacaaaagttcacattttagattcatttaattaataatgtatatgatctttattatataccacat 18603540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 45045509 - 45045440
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  45045509 cactattataaacaaaaatctatattttagattcattcaattaatgatgtatatggtctttattatagac 45045440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 10934611 - 10934748
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||  ||||||||| ||| |||||||||||||||||| |  |||||||| ||||||||||  |     | |||||||||||||||    
T  10934611 cactattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaa 10934710  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| ||||||||||||||| |||| |||||||||||    
T  10934711 atgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 3225801 - 3225862
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3225801 aaaaatctacattttaaatttattcaattaatgatgtatatgatctttattatagaccacat 3225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 9015935 - 9015878
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacc 126  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9015935 aaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagacc 9015878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 23575091 - 23575023
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||||| ||||||||||| |||||||    
T  23575091 tataaacaaaaatttgtattgtagatttatttatttaacgatgtatatggtctttattatataccacat 23575023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 25267988 - 25268053
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  25267988 ttataaacaaaaatctacattttagattcatttaattaatgat-tatatgatctttattataaacca 25268053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 2805940 - 2805871
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||| |||| |||| |||||| ||| ||| ||||||| |||||||||||||||||||||||||||||    
T  2805940 ttataaataaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacat 2805871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 7258717 - 7258643
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  |||| |||| |||||||||| ||| ||||||||||| ||||| |||||||||||||||||||    
T  7258717 cactattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattatagaccacat 7258643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 41753890 - 41753816
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||||||||||| |||||||||||| ||| ||||||||||||  ||  ||| |||||||||||||||    
T  41753890 cactattataaacaaaaattaatattttagattcattcaattaatgatgttcattgtctgtattatagaccacat 41753816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 24287894 - 24287780
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagacc----acatttaatgatgaatgaatctaaaatg-ttatttttgcttataattg 173  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||    ||||    | ||||||||||||||||||   | ||||||||||||| |    
T  24287894 attttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatctaaaatgcaaagttttgcttataatag 24287795  T
Q  174 tgagcggagggtgta 188  Q
    ||| |||||||||||    
T  24287794 tgaccggagggtgta 24287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 5888468 - 5888343
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaa 151  Q
    |||| |||||| ||||||| ||  || |||||| ||| ||||||||||||||||| |||||||||||||| ||||  |     | |||||||||||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaa 5888369  T
Q  152 atgtt-atttttgcttataattgtga 176  Q
    | ||| ||||||||||||||| ||||    
T  5888368 acgttaatttttgcttataatagtga 5888343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 190
Target Start/End: Complemental strand, 13080215 - 13080082
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt 156  Q
    |||||||||||||| || |||||| ||| ||| |||||||||||||| || ||||||||| |||| ||||  |     | ||||||||||||||||||||    
T  13080215 ttataaacaaaaatctacattttacattcattgaattaatgatgtatgtggtctttattaaagactacatacatcatttaatgaatgaatctaaaatgtt 13080116  T
Q  157 atttttgcttataattgtgagcggagggtgtaca 190  Q
      ||||| ||||||| ||||   |||||||||||    
T  13080115 gattttggttataatagtgacaagagggtgtaca 13080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 35874487 - 35874539
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  35874487 aaaatttatattttatattcatttaattaatgatgtatatagtctttattata 35874539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 34580699 - 34580574
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat--ttaa--tgatgaatgaatctaaaatg-t 155  Q
    |||||| ||||| ||| ||||||| |||  || ||||||||||||||||| ||||||||||| |||||||   |||  | ||||||||| |||||||| |    
T  34580699 ttataagcaaaactttgtattttatattctttcaattaatgatgtatatggtctttattataaaccacatacataatttaatgaatgaacctaaaatgat 34580600  T
Q  156 tatttttgcttataattgtgagcgga 181  Q
    | |||||||||||||| |||| ||||    
T  34580599 tttttttgcttataatagtgaccgga 34580574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 23627674 - 23627748
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| | ||||||||||||||| | ||||||||||| ||  |||||||| ||||||||||    
T  23627674 cactattataagcaaaaatctgtattttagatttattcatttaatgatgtacatagtctttattttagaccacat 23627748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 27518447 - 27518373
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||| || |||||||||| ||| | ||||||||| | ||  |||||||||||||||||||    
T  27518447 cactattataaacaaaaatctacattttagattcattcatttaatgatgcacatagtctttattatagaccacat 27518373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 36058902 - 36058829
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||| | || |||| ||||||| ||||||| |||||| |||||||||||||||| |||||    
T  36058902 cactattataaacaaaaatat-taatttaaatttattcaattaataatgtatttgatctttattatagatcacat 36058829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 468025 - 467980
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||    
T  468025 attttagatttatttaattaatgatatatatagtctttattataga 467980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 24017731 - 24017800
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||   |||||| |||  || ||||||||||||||||||||||||||| |||||||||    
T  24017731 ttataagcaaaaattaccattttaaattccttcaattaatgatgtatatgatctttattacagaccacat 24017800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 33385298 - 33385229
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||  ||| |||||||||| ||| |||||||||| ||||| || |||||||||||||||||    
T  33385298 ttataagcaaaaccttacattttagattcattcaattaatgatatatataatatttattatagaccacat 33385229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 7484626 - 7484762
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaa 151  Q
    ||||||||||| ||||||  || |||||||||| ||| | | ||||||||||||  |||||||||| ||||||||  |     | |||||||||||||||    
T  7484626 cactgttataagcaaaaacata-attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaa 7484724  T
Q  152 atgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||| |||||||||||||||  ||| || ||||||||    
T  7484725 atgttgatttttgcttataataatgaccgtagggtgta 7484762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 17923779 - 17923731
Alignment:
Q  74 tttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  17923779 tttacattttagatttattcaattaatgatgtatttgatcattattata 17923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 2382718 - 2382647
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||||||||| ||||| |||  |||| ||||  ||| | |||||||| |||||||||||||||||||||||    
T  2382718 cactgttataagcaaaactttgcatttcagatacattcatttaatgatatatatgatctttattatagacca 2382647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 13496567 - 13496496
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| |||||||||| |||||| ||| ||| | ||||||||| | ||| ||||||||||||||||    
T  13496567 cactattataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattatagacca 13496496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 36916614 - 36916665
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||||||||||    
T  36916614 attttagatttattcaattaatgatatatttagtctttattatagaccacat 36916665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 40640405 - 40640338
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccac 128  Q
    |||||| ||||| |||  |||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  40640405 ttataagcaaaactttgcattttagattcattcaattaatgatgtacatagtctttattatagaccac 40640338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 3444630 - 3444680
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgta 106  Q
    |||| ||||||||||||||||| |||||| ||| ||| |||||||||||||    
T  3444630 cactattataaacaaaaatttacattttatattcattcaattaatgatgta 3444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 6614817 - 6614743
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  |||||| ||||||||  ||||||| ||||||| || |||||  |||||||||||||||||||    
T  6614817 cactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacat 6614743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 13290043 - 13290117
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||| ||| ||||| |||| ||| |||||||  |||||||| |||| ||||||||||||||    
T  13290043 cactattataagcaaaaaattacattttggattcattcaattaatagtgtatatggtcttcattatagaccacat 13290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 29916239 - 29916189
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||| ||||    
T  29916239 ttttagattcattcaattgatgatgtatatgatctatattatagactacat 29916189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 33070297 - 33070223
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||  |||||||||| ||| | |||||| |||||||| |||||||||||||| ||||    
T  33070297 cactattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacat 33070223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 10117064 - 10117117
Alignment:
Q  138 tgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtaca 190  Q
    |||||||||||||||||| | |||||||||||||| |||| |||| ||||||||    
T  10117064 tgaatgaatctaaaatgtaaatttttgcttataatagtgaccggatggtgtaca 10117117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 10679140 - 10679193
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    |||| ||||| ||||||||||| |||||| ||| |||||||||||||| |||||    
T  10679140 cactattatagacaaaaatttacattttacattcatttaattaatgatttatat 10679193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 11335694 - 11335625
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||| |||  |||||||||| ||| ||||||| ||||||||||||||| ||| ||| |||||    
T  11335694 ttataagcaaaactttgcattttagattcattcaattaataatgtatatgatctttgttagagagcacat 11335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 13211260 - 13211313
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||||| ||||||||  |||||||||||||| ||| || |||||||||||    
T  13211260 aaaaatttattttttagatacatttaattaatgatatatgtggtctttattata 13211313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 20269777 - 20269826
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    ||||||||||||| |||| |||||| |||||| ||| |||||||||||||    
T  20269777 ttataaacaaaaaattattttttaggtttattcaataaatgatgtatatg 20269826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 21056406 - 21056455
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatg 110  Q
    ||||||||||||| |||| |||||| |||||| ||| |||||||||||||    
T  21056406 ttataaacaaaaaattattttttaggtttattcaataaatgatgtatatg 21056455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 27518408 - 27518461
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||||  ||||||| ||||||| |||| ||||||||||||    
T  27518408 atgaatgaatctaaaatgtagatttttgtttataatagtgaccggagggtgtac 27518461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 1662670 - 1662722
Alignment:
Q  137 atgaatgaatctaaaatgt-tatttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| ||||||||||||| || |||| ||||| |||||    
T  1662670 atgaatgaatctaaaatgtatatttttgcttattatagtgaccggagagtgta 1662722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 2296583 - 2296535
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||| ||| ||||||| ||||| ||| ||||||||||||||||    
T  2296583 attttagattcattcaattaataatgtacatggtctttattatagacca 2296535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 7429012 - 7428968
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    ||||||||||||||||||||| ||| ||| |||||||||| ||||    
T  7429012 caaaaatttatattttagattcattcaataaatgatgtatgtgat 7428968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 7484664 - 7484612
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||  | |||||||||||||  |||| ||||||||||||    
T  7484664 atgaatgaatctaaaattatgtttttgcttataacagtgaccggagggtgtac 7484612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 9056147 - 9056087
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| |  ||||||||  |||||||||||||||||| || |||||||||||    
T  9056147 tataagcaaaaattcactttttagatacatttaattaatgatgtatgtggtctttattata 9056087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 9808498 - 9808438
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||| || ||||||||  ||||||||||| |||||| || |||||||||||    
T  9808498 tataagcaaaaattcattttttagatacatttaattaattatgtatgtggtctttattata 9808438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 11295711 - 11295659
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||| |||||||||||| ||||||||||||||| |||| |||| ||||||    
T  11295711 atgaatgtatctaaaatgttgatttttgcttataatagtgaccggaaggtgta 11295659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 13496528 - 13496580
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    |||||||||| |||||||| | |||||||||||||| |||| |||||||||||    
T  13496528 atgaatgaatttaaaatgtaaatttttgcttataatagtgaccggagggtgta 13496580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 33070258 - 33070314
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgtacaaa 192  Q
    ||||||||||||||||||  |  ||||||||||||| |||| |||||||||||||||    
T  33070258 atgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgtacaaa 33070314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 37716206 - 37716150
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgat 112  Q
    ||||| |||||| |||||||||| ||||||||  ||| |||||||||||||| ||||    
T  37716206 cactgatataaataaaaatttattttttagatacattcaattaatgatgtatgtgat 37716150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 11746360 - 11746294
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  11746360 cactgttataaaaaaaaatttacattttagattcattcaattaatgatgtatatgatctttattata 11746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 12383721 - 12383647
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||| || |||||||||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  12383721 cactattataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacat 12383647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 20704155 - 20704081
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||||||||| ||||| |||| ||| || ||||||| ||||||||||||||||| |||||||||||||||||||    
T  20704155 cactgttataatcaaaattttacattctaaatttattcaattaatgatgtatatggtctttattatagaccacat 20704081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 17214320 - 17214253
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||| || ||||||| |||||||||||    
T  17214320 ataaacaaaaatttatattttatattcatttaattaattatgtatgtggtctttataatagaccacat 17214253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 2827579 - 2827641
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  2827579 caaaattttacattttagattcatttatttaatgatgtatatgaactttattatagaccacat 2827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 13281542 - 13281616
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| ||||||||||||||||||||||| |||||| ||||||    
T  13281542 cactattataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacat 13281616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 13506842 - 13506961
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca----catttaatgatgaatgaatctaaa 151  Q
    |||| |||||| ||||| |||| || ||| ||| |||||||||||||||||||||||||||||||||||| |    |||    | |||||| ||| ||||    
T  13506842 cactattataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattatagactagatgcatcatttaatgaataaatttaaa 13506941  T
Q  152 atgttatttttgcttataat 171  Q
    ||||||||||||||||||||    
T  13506942 atgttatttttgcttataat 13506961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 8146075 - 8145940
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat------ttaatgatgaatgaatctaaaatgt 155  Q
    ||||| |||||| ||| |||||||||| ||| | ||||||||||| ||| |||||||||||||||||||      ||||  ||||||||| |||||||||    
T  8146075 tataagcaaaaaattacattttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaa--atgaatgaacctaaaatgt 8145978  T
Q  156 --tatttttgcttataattgtgagcggagggtgtacaa 191  Q
      | |||||||||||| | |||| ||||||||||||||    
T  8145977 agtttttttgcttatattagtgaccggagggtgtacaa 8145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 6263365 - 6263432
Alignment:
Q  63 ataaacaaaaatttatattttagatttatttaattaa-tgatgtatatgatctttattatagaccaca 129  Q
    |||| |||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||    
T  6263365 ataagcaaaaaattatattttagattaattcaattaaatgatgtatatgatctttattatataccaca 6263432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 11637178 - 11637249
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| |||||  ||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  11637178 cactattataagcaaaacattacattttaaattcattcaattaatgatgtatatgatctttattatagacca 11637249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 14218324 - 14218204
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca----catttaatgatgaatgaatctaaaatgtt 156  Q
    |||||| || |||| || |||||| ||||||||||||||||||||||||| ||||||||||| || |    ||||   | || |||||||||||||| ||    
T  14218324 ttataagcataaatctacattttaaatttatttaattaatgatgtatatggtctttattatatactatattcattatttaataaatgaatctaaaatatt 14218225  T
Q  157 -atttttgcttataattgtga 176  Q
     ||||||||||||||||||||    
T  14218224 gatttttgcttataattgtga 14218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 3102148 - 3102217
Alignment:
Q  57 actgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||||||||| |||||||   || ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  3102148 actgttataagcaaaaatcattactttagatttatttaattaatgatgtatat-atctttattatatacca 3102217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 8449708 - 8449642
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| |||||| |||||||| |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  8449708 cactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattata 8449642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 8458512 - 8458446
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||| |||||| |||||||| |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  8458512 cactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattata 8458446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 12218579 - 12218457
Alignment:
Q  56 cactgttataaacaaaaatttatattt--tagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatcta 149  Q
    |||| |||||||||||||| ||||| |  |||||| ||| ||||||||||||||| |||||||||||||||  |||| ||     | |||||||||| ||    
T  12218579 cactattataaacaaaaatatatatatattagattcattcaattaatgatgtataagatctttattatagattacatatatcatttaatgaatgaatata 12218480  T
Q  150 aaatgtt-atttttgcttataat 171  Q
    ||||||| |||||||||||||||    
T  12218479 aaatgttgatttttgcttataat 12218457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 18886428 - 18886303
Alignment:
Q  68 caaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtta-ttttt 162  Q
    ||||| ||||||||||||| | ||| ||||||| | ||||||   |||||||||||||||||| ||     | ||||||||||||||||| ||| |||||    
T  18886428 caaaactttatattttagagtcattcaattaataacgtatattgcctttattatagaccacatatatcatttaatgaatgaatctaaaatattaattttt 18886329  T
Q  163 gcttataattgtgagcggagggtgta 188  Q
    ||||||||| ||||  ||||||||||    
T  18886328 gcttataatagtgactggagggtgta 18886303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 28555079 - 28555008
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| ||||||| || |||||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  28555079 cactattataagcaaaaatctacattttagattcatttatttaatgatgcacatggtctttattatagacca 28555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 31398358 - 31398284
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  31398358 cactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 31398284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 3199845 - 3199776
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| |||||| ||| |||||| ||| ||| |||||||  |||||||||||||||||||| |||||||    
T  3199845 ttataagcaaaaacttacattttatattcattcaattaatagtgtatatgatctttattataaaccacat 3199776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 5571640 - 5571579
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||| ||||||||||| ||| ||| |||||||||||||| |||||||| |||||||||    
T  5571640 aaaactttttattttagattaattcaatcaatgatgtatatgacctttattacagaccacat 5571579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 13277148 - 13277103
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  13277148 tataaacaaaaatttatattttagattcattcaataaatgatgtat 13277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 16465633 - 16465564
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||||||||||||||||| || ||||||| ||||||| ||||| | |||||||| ||| ||||    
T  16465633 ttattaacaaaaatttatattttaggttcatttaataaatgatgcatatggtatttattatggactacat 16465564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 31158961 - 31158901
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| || |||||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  31158961 aaaaatctacattttagattcattaaattaatgatata-atgatctttattatagaccacat 31158901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 14031716 - 14031672
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcgga 181  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||    
T  14031716 atgaatgaatctaagatgttatttttgcttataatagtgaccgga 14031672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 15517137 - 15517085
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||  | |||||||||||||| |||| ||||||||||||    
T  15517137 atgaatgaatctaaaattatgtttttgcttataatagtgaccggagggtgtac 15517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 21506589 - 21506529
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| ||||||||||||||    
T  21506589 tataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattata 21506529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 26527237 - 26527185
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagggtgta 188  Q
    ||||||| |||||||||||| ||||||||||||||| |||| |||||||||||    
T  26527237 atgaatgtatctaaaatgttgatttttgcttataatagtgatcggagggtgta 26527185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 31398319 - 31398375
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgtacaaa 192  Q
    ||||||||||||||||||| |  ||||||||||||| |||| |||||||||||||||    
T  31398319 atgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtacaaa 31398375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 31761330 - 31761282
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatat 109  Q
    ||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  31761330 ttataaataaaagtttacattttagatgtatttaattaatgatgtatat 31761282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 34379782 - 34379730
Alignment:
Q  137 atgaatgaatctaaaatgttatttttgcttataattgtgagcggagggtgtac 189  Q
    |||||||||||||||||  | |||||||||||||| |||| ||||||||||||    
T  34379782 atgaatgaatctaaaattatgtttttgcttataatagtgaccggagggtgtac 34379730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 7158270 - 7158333
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    ||||| ||||||| ||| ||||||||||||| ||| |||||||||| || |||||||| |||||    
T  7158270 tataagcaaaaatctatgttttagatttattcaataaatgatgtatgtggtctttattgtagac 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 10258412 - 10258365
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    ||||||||| ||| ||||||||||||||||| || |||||||||||||    
T  10258412 ttttagattcattcaattaatgatgtatatggtcattattatagacca 10258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 12383919 - 12383848
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| |||||| ||||||| || |||||||| | ||| ||||||| ||||||||  ||||||||||||||||    
T  12383919 cactattataagcaaaaatctacattttagactcattcaattaattatgtatatattctttattatagacca 12383848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 26527283 - 26527330
Alignment:
Q  137 atgaatgaatctaaaatgtt-atttttgcttataattgtgagcggagg 183  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  26527283 atgaatgaatctaaaatgttaatttttgcttataatagtgaacggagg 26527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 34170086 - 34170157
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacca 127  Q
    |||| ||||||||||||||  | |||||||||| ||| | | |||||||||| |||||| ||||||||||||    
T  34170086 cactattataaacaaaaatcaacattttagattcattcattaaatgatgtatgtgatctatattatagacca 34170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 6032974 - 6033048
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  ||||||| |||||||||||| ||||||| ||| |||||| || |||||| ||||||| ||||    
T  6032974 cactattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtctttaatatagactacat 6033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 6894822 - 6894868
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatga 102  Q
    |||| ||||||||||||||||| |||||||||| ||||||| |||||    
T  6894822 cactattataaacaaaaatttacattttagattcatttaatgaatga 6894868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 10644296 - 10644346
Alignment:
Q  80 ttttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||||||||||||||||||||| ||||   |||||||||||||||    
T  10644296 ttttaggtttatttaattaatgatgtatgtgattcatattatagaccacat 10644346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 18097068 - 18097142
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| |||| |||||||||| ||||| ||||||||| | ||  ||||||||||| |||||||    
T  18097068 cactattataagcaaaagtttacattttagattcatttatttaatgatgcacatagtctttattatataccacat 18097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 30916962 - 30917036
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||| ||| |||||| ||||||| |||||||| ||||| |  |||||||||||||| ||||    
T  30916962 cactattataagcaaaaaattacattttacatttattcaattaatggtgtattttgtctttattatagactacat 30917036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 32254953 - 32254879
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||| || |||||||||||| ||| | | |||||||||| || |||||||||||||| ||||    
T  32254953 cactattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacat 32254879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 6560750 - 6560803
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgtac 189  Q
    ||||||||||||||||||| | |||||||||||| | |||| ||||||||||||    
T  6560750 atgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgtac 6560803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 7718400 - 7718461
Alignment:
Q  64 taaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagac 125  Q
    |||||||||||||| |||||||||| ||||||| |||||| ||| |||| | ||||| ||||    
T  7718400 taaacaaaaatttacattttagattaatttaataaatgatatatgtgatttatattacagac 7718461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 31714654 - 31714601
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    |||||| || ||||||| || ||| ||||||||||||||||||| |||||||||    
T  31714654 aaaaatctacattttaggttcattcaattaatgatgtatatgatatttattata 31714601  T

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Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 33053786 - 33053847
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||||| ||| ||||||||| ||| ||| |||||||||| ||||||||||| ||||| ||||    
T  33053786 aaaaatctatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacat 33053847  T

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Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 34379766 - 34379868
Alignment:
Q  79 attttagatttatttaattaatgatgtatatgatctttattatagaccacatttaa----tgatgaatgaatctaaaatgtt-atttttgcttataattg 173  Q
    |||||||||| ||| | | ||||||||||||  |||||||||| ||||||||  |     | |||||||||||||||||||| ||||||||||||||| |    
T  34379766 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 34379865  T
Q  174 tga 176  Q
    |||    
T  34379866 tga 34379868  T

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Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 6560783 - 6560715
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    ||||| |||||| ||| |||||||||| ||| | ||||||||| | ||  |||||||||||||||||||    
T  6560783 tataagcaaaaaattacattttagattcattcatttaatgatgcacatagtctttattatagaccacat 6560715  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 8146042 - 8146094
Alignment:
Q  137 atgaatgaatctaaaatgtta-tttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||||| | |||||||||||| | |||| |||||||||||    
T  8146042 atgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgta 8146094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 30460739 - 30460679
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| ||||||||||  ||||||||  ||| |||||||||||||| || |||||||||||    
T  30460739 tataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattata 30460679  T

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Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 32254914 - 32254966
Alignment:
Q  137 atgaatgaatctaaaatgttat-ttttgcttataattgtgagcggagggtgta 188  Q
    ||||||||||||||||| |||  ||||||||||||| |||| |||||||||||    
T  32254914 atgaatgaatctaaaatattaacttttgcttataatagtgatcggagggtgta 32254966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 146095 - 145966
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatg-t 155  Q
    ||||||||||||||||  |||||||||| ||| ||||||||||||||||| |||||||| ||||||||||  |     | |||||||||||||||||| |    
T  146095 ttataaacaaaaatttgcattttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatgaatctaaaatgat 145996  T
Q  156 tatttttgcttataattgtgagcggagggt 185  Q
     ||||||| ||||||| |||| ||||||||    
T  145995 gatttttgtttataatagtgaccggagggt 145966  T

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Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 216286 - 216347
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattata 122  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  216286 ttatatacaaaaatttatattttaaattcatttaattaatgatgcatatgatctttattata 216347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 7789 - 7715
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| || |||||||||| ||| | ||||||||| | ||| |||||||||||||||||||    
T  7789 cactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacat 7715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 24620 - 24750
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacattta----atgatgaatgaatctaaaatgtt- 156  Q
    ||||| |||||  |||||||||||||| ||| ||||||| | |||||| ||||||||||||||||||||  |     | ||||||||||||||||| ||     
T  24620 tataagcaaaacattatattttagattcattcaattaataacgtatattatctttattatagaccacatacatcatttaatgaatgaatctaaaatatta 24719  T
Q  157 atttttgcttataattgtgagcggagggtgt 187  Q
    ||||||||||||||| |||| ||||||||||    
T  24720 atttttgcttataatagtgaccggagggtgt 24750  T

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Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 40579 - 40515
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacc 126  Q
    ||||| |||||||  ||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  40579 tataagcaaaaatcaatattttggatttattcaattaatgttgtatatgatctttattatagacc 40515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 2428 - 2502
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  2428 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 10083 - 10157
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| |||||||||| || ||||||| ||| | ||||||||| | |||||||||||||||||||||||    
T  10083 cactattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacat 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 10694 - 10624
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacatt 131  Q
    ||||||||| || | ||||| ||||||||||| |||||||||| ||||||||  |||||||||||||||||    
T  10694 ttataaacataactctatatgttagatttattcaattaatgatatatatgattcttattatagaccacatt 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 139304 - 139378
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||||| ||||||| ||| ||||| ||| ||| | ||||||||| | |||||||||||||||||||||||    
T  139304 cactattataagcaaaaatctattttttacattcattcatttaatgatgcacatgatctttattatagaccacat 139378  T

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Target: scaffold0631 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 4361 - 4418
Alignment:
Q  62 tataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttatt 119  Q
    ||||| ||||| ||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  4361 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttatt 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 693 - 735
Alignment:
Q  81 tttagatttatttaattaatgatgtatatgatctttattataga 124  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  693 tttagatttattcaattaatgatgtatatgat-tttattataga 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 4103 - 4029
Alignment:
Q  56 cactgttataaacaaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| ||||||  |||||| ||||||||  ||||||| ||||||| || |||||  |||||||||||||||||||    
T  4103 cactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacat 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 88981 - 88935
Alignment:
Q  61 ttataaacaaaaatttatattttagatttatttaattaatgatgtat 107  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||||    
T  88981 ttataaacaaaaatctatattttatattcattcaattaatgatgtat 88935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 5507 - 5446
Alignment:
Q  69 aaaaatttatattttagatttatttaattaatgatgtatatgatctttattatagaccacat 130  Q
    |||| |||| |||||||||| |||||||||||||||||| || | | || ||||||||||||    
T  5507 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacat 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 438276 - 438220
Alignment:
Q  70 aaaatttatattttagatttatttaattaatgatgtatatgatctttattatagacc 126  Q
    ||||| || |||||| ||||||| ||||||||||||||||   ||||||||||||||    
T  438276 aaaatctacattttaaatttattcaattaatgatgtatatatactttattatagacc 438220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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