View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2885-Insertion-19 (Length: 477)
Name: NF2885-Insertion-19
Description: NF2885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2885-Insertion-19 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 8 - 477
Target Start/End: Original strand, 26846883 - 26847350
Alignment:
| Q |
8 |
ctttttgatgcttcttttgcacctaataacgttttctgtaataaggtaattggtgcacttttttgttctctttctttcttttagtattcagaagacctag |
107 |
Q |
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| T |
26846883 |
ctttttgatgcttcttttgcacctaataacgttttctgtaataaggtaattggtgcacttttttgttccctttctttcttttagtattcagaagacctag |
26846982 |
T |
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| Q |
108 |
ctagctatttttcttctactcaattaattaaaataagttggatatgttttttggtattgtttcaggattattatgaacggaaccaagatcttcaagttat |
207 |
Q |
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| T |
26846983 |
ctagctatttttcttctactcaattaattaaaataagttggatatgttttttggtattgtttcaggattattatgaacagaaccaagatcttcaagttat |
26847082 |
T |
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| Q |
208 |
aaacatgtctgactgggtaccacaatctcaagttagattccctcagcttagtgctaattcgaatgttccccagattgattctttagatggggttatgaaa |
307 |
Q |
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| T |
26847083 |
aaacatgtctgactgggtaccacaatctcaagttagattccctcagcttagtgctaattcgaatgttccc--aattgattctttagatggggttatgaaa |
26847180 |
T |
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| Q |
308 |
atgcaacatacaaaagctgttgaaggatacaaagttccttcaactagtccttcattcatcaaacaatgtagaggcactcgttaataaacttctgtaaaaa |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26847181 |
atgcaacatacaaaagctgttgaaggatacaaagttccttcaactagtccttcattcatcaaacaatgtagaggcactcgttaataaacttctgtaaaaa |
26847280 |
T |
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| Q |
408 |
tctgttnnnnnnntctcccatcatttgttttcttatccatttacaatttttatctagaatttctatgcaa |
477 |
Q |
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|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
26847281 |
tctgttaaaaaaatctcccatcatttgttttcttatccgtttacaatttttatctagaatttctatgcaa |
26847350 |
T |
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