View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2885_high_8 (Length: 232)
Name: NF2885_high_8
Description: NF2885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2885_high_8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 30634113 - 30634344
Alignment:
| Q |
1 |
caattcccaacaaatctgaatttccaaatgtgaaacaatataccaaatcattactatgattattattcccttttaatgccacgtcagcaactttatataa |
100 |
Q |
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| T |
30634113 |
caattcccaacaaatctgaatttccaaacgtgaaacaatataccaaatcattactatgattattattcccttttaatgccacgtcagcaactttatataa |
30634212 |
T |
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| Q |
101 |
tagtctctcacctgaaacactcatctccgccccttcaaacacaagtgtcaccgccggtaacggcggaagaaccgaacccgacccgatacggtaacacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
30634213 |
tagtctctcacctgaaacactcatctccgccccttcaaacacaagtgtcaccgccggtaacgttggaagaaccgaacccgacccgatacggtaacacaaa |
30634312 |
T |
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| Q |
201 |
tccattgcaccttggaagacaaaattcgtgtc |
232 |
Q |
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|||||||||||||||||||||||||| ||||| |
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| T |
30634313 |
tccattgcaccttggaagacaaaatttgtgtc |
30634344 |
T |
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