View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2887-Insertion-9 (Length: 408)

Name: NF2887-Insertion-9
Description: NF2887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2887-Insertion-9
NF2887-Insertion-9
[»] chr5 (28 HSPs)
chr5 (255-321)||(34154843-34154909)
chr5 (256-321)||(8170013-8170078)
chr5 (256-321)||(32703463-32703528)
chr5 (256-320)||(7368437-7368501)
chr5 (262-322)||(24448937-24448997)
chr5 (261-353)||(41014364-41014450)
chr5 (261-321)||(43574652-43574712)
chr5 (261-346)||(19142953-19143032)
chr5 (261-321)||(2838824-2838884)
chr5 (262-353)||(35710358-35710443)
chr5 (261-353)||(38879627-38879715)
chr5 (261-321)||(4619133-4619195)
chr5 (261-321)||(13801796-13801858)
chr5 (261-343)||(16880660-16880736)
chr5 (266-320)||(1565483-1565537)
chr5 (264-322)||(20135653-20135713)
chr5 (261-315)||(43334249-43334305)
chr5 (261-321)||(7097789-7097849)
chr5 (261-321)||(22600500-22600560)
chr5 (275-353)||(16957374-16957446)
chr5 (261-321)||(27328798-27328860)
chr5 (264-320)||(29334444-29334501)
chr5 (261-328)||(41425994-41426061)
chr5 (272-321)||(1405244-1405293)
chr5 (261-310)||(3771385-3771434)
chr5 (266-322)||(12477148-12477205)
chr5 (265-316)||(11657733-11657785)
chr5 (261-306)||(42924876-42924923)
[»] chr6 (14 HSPs)
chr6 (256-321)||(25557764-25557829)
chr6 (256-321)||(1347003-1347068)
chr6 (256-321)||(1354786-1354851)
chr6 (256-321)||(26097199-26097264)
chr6 (261-353)||(29355858-29355946)
chr6 (261-321)||(12221944-12222006)
chr6 (264-321)||(32579474-32579531)
chr6 (256-306)||(28007667-28007717)
chr6 (261-320)||(7947401-7947461)
chr6 (261-315)||(15866074-15866126)
chr6 (264-318)||(6024282-6024338)
chr6 (272-321)||(23930156-23930205)
chr6 (265-314)||(33138883-33138932)
chr6 (261-301)||(1941901-1941941)
[»] chr4 (48 HSPs)
chr4 (256-322)||(9832341-9832407)
chr4 (256-321)||(20225023-20225088)
chr4 (256-321)||(29207927-29207992)
chr4 (261-353)||(30639425-30639511)
chr4 (261-322)||(47444003-47444064)
chr4 (261-353)||(5648304-5648390)
chr4 (256-321)||(11054177-11054242)
chr4 (256-321)||(48598854-48598919)
chr4 (261-321)||(17043423-17043483)
chr4 (256-320)||(47528560-47528624)
chr4 (257-320)||(5306694-5306757)
chr4 (261-321)||(6430655-6430715)
chr4 (262-353)||(25629096-25629181)
chr4 (266-321)||(10277786-10277841)
chr4 (261-353)||(20639661-20639748)
chr4 (264-353)||(40915877-40915960)
chr4 (261-353)||(8473623-8473711)
chr4 (257-315)||(16911604-16911664)
chr4 (257-314)||(47441566-47441623)
chr4 (264-321)||(49796846-49796903)
chr4 (264-321)||(51865067-51865124)
chr4 (261-321)||(7909310-7909370)
chr4 (261-353)||(16408604-16408692)
chr4 (261-353)||(20225120-20225208)
chr4 (261-353)||(23501833-23501921)
chr4 (261-321)||(30690205-30690265)
chr4 (267-321)||(25463174-25463228)
chr4 (261-321)||(54175109-54175171)
chr4 (266-321)||(54730301-54730358)
chr4 (264-320)||(3580870-3580926)
chr4 (261-320)||(30581495-30581555)
chr4 (261-321)||(55766495-55766555)
chr4 (262-321)||(9987863-9987922)
chr4 (262-321)||(14983881-14983940)
chr4 (264-321)||(20908665-20908723)
chr4 (261-315)||(35567216-35567270)
chr4 (279-321)||(38786673-38786715)
chr4 (312-353)||(17315337-17315378)
chr4 (261-321)||(55830750-55830810)
chr4 (261-320)||(19027894-19027953)
chr4 (262-353)||(21647011-21647098)
chr4 (257-320)||(41018824-41018887)
chr4 (263-320)||(30496352-30496409)
chr4 (261-321)||(39029089-39029150)
chr4 (256-321)||(39077825-39077890)
chr4 (262-314)||(7385512-7385564)
chr4 (261-289)||(25343233-25343261)
chr4 (261-321)||(54967067-54967126)
[»] chr1 (49 HSPs)
chr1 (256-353)||(35253190-35253281)
chr1 (256-321)||(38478311-38478376)
chr1 (261-353)||(4349707-4349793)
chr1 (256-321)||(12126866-12126931)
chr1 (256-321)||(34725127-34725192)
chr1 (261-321)||(41319835-41319895)
chr1 (256-321)||(19414501-19414566)
chr1 (256-321)||(47214573-47214638)
chr1 (261-321)||(10378764-10378824)
chr1 (261-321)||(31382243-31382303)
chr1 (261-321)||(32632586-32632646)
chr1 (261-321)||(46247982-46248042)
chr1 (264-321)||(14617110-14617167)
chr1 (261-321)||(11596581-11596641)
chr1 (261-321)||(15505633-15505693)
chr1 (261-321)||(18724574-18724634)
chr1 (261-322)||(19932781-19932844)
chr1 (262-322)||(20036291-20036351)
chr1 (261-321)||(23768349-23768409)
chr1 (261-321)||(18944712-18944774)
chr1 (261-321)||(30395755-30395817)
chr1 (262-321)||(45812566-45812625)
chr1 (261-320)||(46991873-46991932)
chr1 (261-353)||(27474349-27474435)
chr1 (261-315)||(35117801-35117857)
chr1 (265-321)||(23796538-23796594)
chr1 (257-321)||(25468292-25468356)
chr1 (261-353)||(27201716-27201804)
chr1 (262-321)||(6925170-6925229)
chr1 (261-321)||(18741986-18742048)
chr1 (262-313)||(21910686-21910737)
chr1 (261-321)||(35005192-35005254)
chr1 (271-353)||(45402175-45402251)
chr1 (257-322)||(6358186-6358252)
chr1 (261-315)||(6983846-6983900)
chr1 (262-320)||(21723753-21723811)
chr1 (261-315)||(43768208-43768262)
chr1 (264-353)||(20004093-20004178)
chr1 (264-309)||(44485150-44485195)
chr1 (266-322)||(1517339-1517395)
chr1 (267-315)||(20999885-20999933)
chr1 (262-322)||(34148988-34149048)
chr1 (261-353)||(42304210-42304298)
chr1 (269-303)||(4430046-4430080)
chr1 (261-310)||(31442429-31442479)
chr1 (264-353)||(10668297-10668382)
chr1 (264-320)||(8197115-8197171)
chr1 (261-289)||(17470407-17470435)
chr1 (257-321)||(28894587-28894651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (256-321)||(48663-48728)
[»] chr8 (39 HSPs)
chr8 (256-321)||(12670279-12670344)
chr8 (256-353)||(19729381-19729472)
chr8 (261-321)||(2626568-2626628)
chr8 (261-321)||(13160747-13160807)
chr8 (261-321)||(29877140-29877200)
chr8 (261-321)||(36720842-36720902)
chr8 (262-321)||(8897793-8897852)
chr8 (257-320)||(24365089-24365152)
chr8 (264-321)||(30454126-30454183)
chr8 (262-322)||(5135317-5135377)
chr8 (261-321)||(28817655-28817715)
chr8 (261-321)||(44530195-44530255)
chr8 (261-321)||(45071310-45071370)
chr8 (261-320)||(5689677-5689736)
chr8 (261-322)||(17823622-17823683)
chr8 (261-353)||(35261725-35261811)
chr8 (261-321)||(7136556-7136618)
chr8 (262-321)||(20284098-20284159)
chr8 (262-321)||(21070726-21070787)
chr8 (261-353)||(12625936-12626022)
chr8 (261-321)||(389691-389751)
chr8 (261-353)||(20869969-20870057)
chr8 (261-353)||(26954179-26954267)
chr8 (261-321)||(29521714-29521774)
chr8 (256-321)||(20869529-20869592)
chr8 (276-321)||(26102578-26102623)
chr8 (261-353)||(6760868-6760956)
chr8 (261-321)||(8483967-8484027)
chr8 (261-321)||(18164789-18164849)
chr8 (265-353)||(39460997-39461081)
chr8 (261-321)||(16225065-16225127)
chr8 (262-297)||(28873245-28873280)
chr8 (262-321)||(25250569-25250630)
chr8 (261-353)||(10857875-10857961)
chr8 (261-313)||(44742555-44742608)
chr8 (266-314)||(11000985-11001033)
chr8 (256-300)||(23286375-23286419)
chr8 (262-302)||(26457776-26457816)
chr8 (261-289)||(43942370-43942398)
[»] chr7 (43 HSPs)
chr7 (256-321)||(21172038-21172103)
chr7 (256-321)||(42391129-42391194)
chr7 (262-353)||(10693076-10693161)
chr7 (256-321)||(32758300-32758365)
chr7 (264-321)||(48735151-48735208)
chr7 (264-321)||(7879687-7879744)
chr7 (264-321)||(42798718-42798775)
chr7 (262-353)||(18512456-18512541)
chr7 (267-321)||(27889345-27889399)
chr7 (261-322)||(11617616-11617677)
chr7 (262-311)||(19265861-19265910)
chr7 (261-321)||(2541048-2541108)
chr7 (261-321)||(19266496-19266556)
chr7 (261-321)||(27629680-27629740)
chr7 (264-320)||(28362175-28362231)
chr7 (261-321)||(34626237-34626297)
chr7 (261-321)||(38604572-38604632)
chr7 (261-321)||(46354240-46354302)
chr7 (261-321)||(47716505-47716567)
chr7 (264-322)||(1408506-1408564)
chr7 (263-321)||(40463924-40463982)
chr7 (264-321)||(23231606-23231663)
chr7 (256-321)||(31591138-31591203)
chr7 (261-314)||(33871946-33871999)
chr7 (261-322)||(35334844-35334905)
chr7 (261-353)||(42805570-42805658)
chr7 (262-309)||(11741840-11741887)
chr7 (262-321)||(19426919-19426977)
chr7 (263-321)||(13805149-13805207)
chr7 (276-353)||(38262199-38262270)
chr7 (261-322)||(14099034-14099095)
chr7 (261-322)||(14409051-14409112)
chr7 (264-321)||(35787298-35787355)
chr7 (264-305)||(42476920-42476961)
chr7 (262-306)||(8148989-8149033)
chr7 (261-321)||(18747533-18747593)
chr7 (261-305)||(23419719-23419763)
chr7 (261-321)||(28078161-28078221)
chr7 (262-321)||(2662965-2663023)
chr7 (261-309)||(17048856-17048905)
chr7 (267-321)||(45018952-45019010)
chr7 (267-320)||(39123945-39124000)
chr7 (261-321)||(48123513-48123573)
[»] chr3 (39 HSPs)
chr3 (256-321)||(22122946-22123011)
chr3 (256-321)||(34771393-34771458)
chr3 (256-320)||(15797283-15797347)
chr3 (256-321)||(1217151-1217216)
chr3 (256-321)||(31592910-31592975)
chr3 (261-353)||(40272815-40272901)
chr3 (256-353)||(39203577-39203668)
chr3 (264-353)||(54484762-54484845)
chr3 (261-314)||(47624109-47624162)
chr3 (261-321)||(6411851-6411911)
chr3 (261-321)||(16735508-16735568)
chr3 (261-321)||(22609833-22609893)
chr3 (261-353)||(26869774-26869860)
chr3 (261-353)||(353352-353440)
chr3 (261-321)||(9276332-9276391)
chr3 (261-321)||(12914064-12914124)
chr3 (261-353)||(13628793-13628881)
chr3 (261-321)||(26573195-26573255)
chr3 (261-353)||(29366723-29366811)
chr3 (265-321)||(52926248-52926304)
chr3 (262-321)||(54374374-54374434)
chr3 (261-321)||(46421064-46421126)
chr3 (256-321)||(26292393-26292458)
chr3 (261-321)||(33926150-33926211)
chr3 (261-315)||(45786249-45786305)
chr3 (261-353)||(13730605-13730693)
chr3 (261-318)||(49013505-49013564)
chr3 (261-321)||(10795452-10795514)
chr3 (261-321)||(14987025-14987087)
chr3 (262-321)||(45948867-45948926)
chr3 (256-320)||(7696922-7696981)
chr3 (269-321)||(25517199-25517251)
chr3 (261-320)||(34420673-34420733)
chr3 (261-301)||(52428526-52428566)
chr3 (261-300)||(4495714-4495753)
chr3 (261-321)||(8247716-8247778)
chr3 (261-321)||(9607271-9607333)
chr3 (264-320)||(30928177-30928233)
chr3 (261-320)||(53996595-53996655)
[»] scaffold0180 (1 HSPs)
scaffold0180 (263-353)||(24136-24220)
[»] chr2 (40 HSPs)
chr2 (256-353)||(9671220-9671311)
chr2 (261-353)||(10546209-10546295)
chr2 (256-321)||(21779290-21779355)
chr2 (261-321)||(8455345-8455405)
chr2 (257-320)||(17623606-17623669)
chr2 (257-315)||(17668044-17668102)
chr2 (261-353)||(36871538-36871623)
chr2 (261-314)||(22371100-22371153)
chr2 (261-315)||(12023954-12024008)
chr2 (268-352)||(24859992-24860070)
chr2 (261-353)||(10543744-10543832)
chr2 (261-321)||(14444774-14444834)
chr2 (261-321)||(25249767-25249827)
chr2 (262-321)||(23397811-23397870)
chr2 (261-315)||(17380272-17380326)
chr2 (262-320)||(17896307-17896365)
chr2 (264-322)||(24890460-24890518)
chr2 (264-322)||(25079745-25079803)
chr2 (265-353)||(11514486-11514567)
chr2 (261-314)||(32781324-32781377)
chr2 (261-353)||(14530364-14530452)
chr2 (267-314)||(99301-99348)
chr2 (261-320)||(4516381-4516440)
chr2 (264-319)||(13245126-13245181)
chr2 (261-320)||(21377103-21377162)
chr2 (262-321)||(30826083-30826141)
chr2 (264-313)||(5450335-5450384)
chr2 (263-320)||(40762264-40762321)
chr2 (261-314)||(24200659-24200714)
chr2 (265-321)||(44643573-44643629)
chr2 (265-312)||(23145736-23145783)
chr2 (265-312)||(23557526-23557573)
chr2 (264-299)||(27573669-27573704)
chr2 (261-315)||(44449418-44449473)
chr2 (262-321)||(5841075-5841136)
chr2 (284-321)||(4794871-4794908)
chr2 (264-321)||(26684649-26684706)
chr2 (262-303)||(31821390-31821431)
chr2 (261-321)||(25641547-25641607)
chr2 (261-321)||(40416900-40416960)
[»] scaffold0168 (1 HSPs)
scaffold0168 (256-321)||(30618-30683)
[»] scaffold0057 (3 HSPs)
scaffold0057 (262-353)||(46878-46963)
scaffold0057 (261-321)||(24801-24861)
scaffold0057 (264-321)||(43706-43764)
[»] scaffold0311 (1 HSPs)
scaffold0311 (261-351)||(10856-10940)
[»] scaffold0187 (2 HSPs)
scaffold0187 (256-322)||(10078-10144)
scaffold0187 (256-322)||(20406-20472)
[»] scaffold1176 (1 HSPs)
scaffold1176 (256-321)||(1616-1681)
[»] scaffold0223 (1 HSPs)
scaffold0223 (265-321)||(11179-11235)
[»] scaffold0954 (1 HSPs)
scaffold0954 (264-321)||(3593-3650)
[»] scaffold0258 (1 HSPs)
scaffold0258 (264-321)||(13053-13110)
[»] scaffold0018 (1 HSPs)
scaffold0018 (264-321)||(72896-72953)
[»] scaffold0036 (1 HSPs)
scaffold0036 (261-305)||(35062-35106)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 34154909 - 34154843
Alignment:
Q  255 ataaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  34154909 ataaatcagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 34154843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 8170078 - 8170013
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8170078 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 32703463 - 32703528
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32703463 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 32703528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 7368437 - 7368501
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  7368437 taaaacagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatg 7368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 24448937 - 24448997
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  24448937 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgca 24448997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 41014364 - 41014450
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||       |||||||||||||||||||||||| || ||||||    
T  41014364 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 41014450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 43574652 - 43574712
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||    
T  43574652 cagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgc 43574712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 19143032 - 19142953
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactgg 346  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||      |||| |||||||||| |||||||||||||    
T  19143032 cagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggacc------atgcgtatgcgggagatttagtgcactgg 19142953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 2838824 - 2838884
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||||||||| |||||    
T  2838824 cagggtaaggctgcgtacaatacaccaaatggtgggatcccttctcggaccctgcgtatgc 2838884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 35710358 - 35710443
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||||      | ||||||||||||||||| |||||||| || ||||||    
T  35710358 agggtaaggctgcgttcaatacaccaaatggtgggaccccttcccgga------acatgcatatgcgggagctctagtgcaccgggttgccc 35710443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 38879627 - 38879715
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  38879627 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 38879715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 4619195 - 4619133
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  4619195 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 4619133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 13801858 - 13801796
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  13801858 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 13801796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 16880736 - 16880660
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcac 343  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||||      |||| |||||||||||||||||||||    
T  16880736 cagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggacc------atgcgtatgcgggagctttagtgcac 16880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 1565483 - 1565537
Alignment:
Q  266 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  1565483 taaggctgcgtacaatgcaccaaatggcgggaccccttcccggaccctgcatatg 1565537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 20135653 - 20135713
Alignment:
Q  264 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||    
T  20135653 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgca 20135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 43334249 - 43334305
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  43334249 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc 43334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 7097849 - 7097789
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||||||||||||||||| ||  ||||||||||| ||||||| |||||    
T  7097849 cagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgc 7097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 22600500 - 22600560
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| ||||||||||||||||| ||| | ||||||||||| ||||| |||||    
T  22600500 cagggtaaggctgtgtacaatacaccaaatggtgggatcccttcccggatcctgcgtatgc 22600560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 16957374 - 16957446
Alignment:
Q  275 gtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 16957446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 27328798 - 27328860
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||| ||||||| |||||    
T  27328798 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgc 27328860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 29334444 - 29334501
Alignment:
Q  264 ggtaaggctgcgtacaatacacca-aatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||||||||||| |||| ||| |||| |||||||||||||| ||||    
T  29334444 ggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatg 29334501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 41425994 - 41426061
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcg 328  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||| ||| ||||  |||| ||||||    
T  41425994 cagggtaaggctgcatacaatacaccaattggtgggaccccttcccagactctgcggatgcgtatgcg 41426061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 1405244 - 1405293
Alignment:
Q  272 tgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||| ||| |||| |||| | |||||||||||||    
T  1405244 tgcgtacaatacaccaaatggtgggaccctttcctgaaccctgcatatgc 1405293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 3771385 - 3771434
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggac 310  Q
    ||||||||||||| | |||||||||||| || ||| ||||||||||||||    
T  3771385 cagggtaaggctgtgaacaatacaccaattggtgggaccccttcccggac 3771434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 12477205 - 12477148
Alignment:
Q  266 taaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||  |||| ||||||    
T  12477205 taaggctgcgtacaatacaccaaaatggtgggaccccttcccggattctgcgtatgca 12477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 11657785 - 11657733
Alignment:
Q  265 gtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgca 316  Q
    |||||||||| ||||||||||| ||||| ||| ||||||||||| ||||||||    
T  11657785 gtaaggctgcatacaatacaccaaaatggtgggaccccttcccgaaccctgca 11657733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 42924923 - 42924876
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttccc 306  Q
    |||||||||| |||||||||||||||  ||||||||||| ||||||||    
T  42924923 cagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttccc 42924876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 25557764 - 25557829
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25557764 taaaacagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgc 25557829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 1347003 - 1347068
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1347003 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 1347068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 1354851 - 1354786
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1354851 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 1354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 26097199 - 26097264
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  26097199 taaaacagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgc 26097264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 29355946 - 29355858
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  29355946 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 29355858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 12222006 - 12221944
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  12222006 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 12221944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 32579474 - 32579531
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  32579474 ggtaagcctgcgtacaataccccaaatggtgggaccccttcccagaccctgcatatgc 32579531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 28007667 - 28007717
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttccc 306  Q
    |||| |||||| |||||||||||||||||||||||| ||| ||||||||||    
T  28007667 taaaacagggtcaggctgcgtacaatacaccaaatgctgggaccccttccc 28007717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 7947461 - 7947401
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||||||||||||| ||||| |||  |||||||||||||| ||| ||||    
T  7947461 cagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccggaccttgcgtatg 7947401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 15866126 - 15866074
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    |||||||| ||||||||  |||||||||||| ||| |||||||||||||||||||    
T  15866126 cagggtaaagctgcgta--atacaccaaatggtgggaccccttcccggaccctgc 15866074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 6024282 - 6024338
Alignment:
Q  264 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcata 318  Q
    |||||| |||||||||||||||||  |||||||| ||| |||||||||||| |||||    
T  6024282 ggtaagactgcgtacaatacaccaataatgatgggacctcttcccggaccccgcata 6024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 23930205 - 23930156
Alignment:
Q  272 tgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||| ||| ||| |||||||| |||||||||| |||||    
T  23930205 tgcgtacaatacaccagatggtgggaccccttcacggaccctgcttatgc 23930156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 33138883 - 33138932
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||| ||||||||||||||||||| ||| |||| || ||||||||||    
T  33138883 gtaaggccgcgtacaatacaccaaatggtgggacccttttccggaccctg 33138932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 1941901 - 1941941
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaacccc 301  Q
    |||||||||||||||||||||||||| |||| ||| |||||    
T  1941901 cagggtaaggctgcgtacaatacaccgaatggtgggacccc 1941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 9832407 - 9832341
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  9832407 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgca 9832341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 20225023 - 20225088
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  20225023 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 20225088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 29207992 - 29207927
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29207992 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 29207927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 30639425 - 30639511
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||      |||||||||||||||||||||||||||| ||||||    
T  30639425 cagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccggaccc------tgcatatgcgggagctttagtgcactgggttgccc 30639511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 47444003 - 47444064
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47444003 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgca 47444064  T

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Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 5648304 - 5648390
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||| |||||||||| ||||||    
T  5648304 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagcttcagtgcactgggttgccc 5648390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 11054242 - 11054177
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11054242 taaaacagggtaagactgcgtacaatacaccaaatggcggaaccccttcccggaccctgcatatgc 11054177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 48598919 - 48598854
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  48598919 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccatgcatatgc 48598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 17043483 - 17043423
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  17043483 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgc 17043423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 47528624 - 47528560
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  47528624 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgaatatg 47528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 5306757 - 5306694
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  5306757 aaatcagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 6430715 - 6430655
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  6430715 cagggtaaggctgcgtacaatacaccaaatggtgggaccacttcccggaccctgcgtatgc 6430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 25629096 - 25629181
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||      | ||||||||||||||||||||||| || ||||||    
T  25629096 agggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccc------tacatatgcgggagctttagtgcaccgggttgccc 25629181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 10277841 - 10277786
Alignment:
Q  266 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  10277841 taaggctgcgtacaatacaccaaatggtgaaaccccttcccagaccctgcatatgc 10277786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 20639748 - 20639661
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  20639748 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 20639661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 40915877 - 40915960
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||      ||| ||||||||||||| ||||||| |||||||||    
T  40915877 ggtaaggctgcgtacaatacaccaaatggtgggagcccttcccggaccc------tgcgtatgcgggagcttcagtgcaccggattgccc 40915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 8473711 - 8473623
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaacccctt-cccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||| |||||||||||||||| ||| ||||||| |||||||||      ||||||||||||||||||||||||| || ||||||    
T  8473711 cagggtaaggctgcatacaatacaccaaatggtgggaccccttccccggaccc-----ctgcatatgcgggagctttagtgcaccgggttgccc 8473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 16911604 - 16911664
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgc 315  Q
    |||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||    
T  16911604 aaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgc 16911664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 47441623 - 47441566
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||||||||||| ||||||||||||||||| | | ||||||||||||||||||    
T  47441623 aaatcagggtaaggctgtgtacaatacaccaaatggttggaccccttcccggaccctg 47441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 49796846 - 49796903
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  49796846 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 49796903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 51865124 - 51865067
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||    
T  51865124 ggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgc 51865067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 7909370 - 7909310
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  7909370 cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 7909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 16408692 - 16408604
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  16408692 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 16408604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 20225120 - 20225208
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  20225120 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20225208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 23501833 - 23501921
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||| |||||||||||||||||  ||| ||| ||||||||||||||||      ||||||||||||||||||||||||| || ||||||    
T  23501833 cagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcatatgcgggagctttagtgcaccgggttgccc 23501921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 30690265 - 30690205
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| ||||||||||||| || ||| ||||||||||||||||||| |||||    
T  30690265 cagggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgc 30690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 25463174 - 25463228
Alignment:
Q  267 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  25463174 aaggttgcgtacaacacaccaaatggtgggaccccttcccggaccctgcatatgc 25463228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 54175109 - 54175171
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaacccctt-cccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  54175109 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgc 54175171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 54730301 - 54730358
Alignment:
Q  266 taaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||    
T  54730301 taaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgtatgc 54730358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 3580926 - 3580870
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||| || |||||||||||||| | | ||||||||||||||||||||||||    
T  3580926 ggtaaggctgtgtgcaatacaccaaatgctaggaccccttcccggaccctgcatatg 3580870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 30581555 - 30581495
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa-tgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||| || ||||||||||||||| || ||| ||||||||||||||||||||||||    
T  30581555 cagggtaagggtgtgtacaatacaccaaaatggtgggaccccttcccggaccctgcatatg 30581495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 55766555 - 55766495
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||  |||| ||||||||| ||||||||| ||| |||||    
T  55766555 cagggtaaggctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgc 55766495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 9987922 - 9987863
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||  |||| |||||||||    
T  9987922 agggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgc 9987863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 14983881 - 14983940
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||||| |||||    
T  14983881 agggtaaggttgcctacaatacactaaatggtgggaccccttcccggaccctgcgtatgc 14983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20908723 - 20908665
Alignment:
Q  264 ggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||| |||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgc 20908665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 35567216 - 35567270
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||| |||||| |||||||||| ||| ||||||||||| |||||||    
T  35567216 cagggtaaggctgtgtacaacacaccaaatggtgggaccccttcccgaaccctgc 35567270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 38786673 - 38786715
Alignment:
Q  279 aatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgc 38786715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 17315378 - 17315337
Alignment:
Q  312 ctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  17315378 ctgcatatgcgtatgcgggagctttagtgcactgggttgccc 17315337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 55830810 - 55830750
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||| ||||||||||||||||  |||| ||||||||| ||||||||| ||| |||||    
T  55830810 cagggtaatgctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgc 55830750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 19027894 - 19027953
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||||||||||||||| || ||| ||||||| || ||| |||| ||||    
T  19027894 cagggtaaggctgcgtacaatacaccaattggtgggacccctttccagactctgcgtatg 19027953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 21647011 - 21647098
Alignment:
Q  262 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||| ||||  |||| ||| |||||||||| |||||       |||||||||||||||||||||||| || ||||||    
T  21647011 agggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccc------cgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 41018887 - 41018824
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||| ||||||||||| |||||||||||||||||  ||| |||||||||| |||| ||| ||||    
T  41018887 aaattagggtaaggctacgtacaatacaccaaatagtgggaccccttcccagaccttgcgtatg 41018824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 30496409 - 30496352
Alignment:
Q  263 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||| ||||||||||||||||  || || |||||||||||| ||| ||||    
T  30496409 gggtaaggctgcatacaatacaccaaatggggggactccttcccggaccgtgcttatg 30496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 39029150 - 39029089
Alignment:
Q  261 cagggtaaggctgcgtacaatacac-caaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| |||||||||||  ||||| ||| ||| ||| |||||||||||||||||    
T  39029150 cagggtaaggctgtgtacaatacacgaaaatggtgggaccactttccggaccctgcatatgc 39029089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 39077890 - 39077825
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||| ||||||||||| |||||||| ||  ||  ||| |||||||||||||||||    
T  39077890 taaaacagggtaaggttgcgtacaatataccaaatggtgagacatctttccggaccctgcatatgc 39077825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 7385564 - 7385512
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||| || || |||||||||||||| ||| |||| |||||||||||||    
T  7385564 agggtaaggttgtgtgcaatacaccaaatggtgggaccctttcccggaccctg 7385512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 25343233 - 25343261
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa 289  Q
    |||||||||||||||||||||||||||||    
T  25343233 cagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 54967067 - 54967126
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| ||| ||||||| |||||||| ||| ||||||||||| ||||| |||||||    
T  54967067 cagggtaaggttgc-tacaatataccaaatggtgggaccccttcccgtaccctacatatgc 54967126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 35253281 - 35253190
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| |||||||| |||||||||    
T  35253281 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcaccggattgccc 35253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 38478376 - 38478311
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38478376 taaaacagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcggaccctgcatatgc 38478311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 4349707 - 4349793
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  4349707 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 4349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 12126931 - 12126866
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  12126931 taaaacagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccggaccctgcatatgc 12126866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 34725192 - 34725127
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  34725192 taaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcccggaccctgcatatgc 34725127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 41319895 - 41319835
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  41319895 cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccgaacccttcatatgc 41319835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 19414501 - 19414566
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  19414501 taaaacaggttaaggctgcgtacaatacaccaaatggtgggaccccttcccgtaccctgcatatgc 19414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 47214573 - 47214638
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  47214573 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgc 47214638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 10378824 - 10378764
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||    
T  10378824 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgc 10378764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 31382303 - 31382243
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  31382303 caggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgc 31382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 32632646 - 32632586
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||    
T  32632646 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaaccctgcatatgc 32632586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 46248042 - 46247982
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  46248042 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 46247982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 14617110 - 14617167
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  14617110 ggtaaggttgcgtacaatacaccaaatggtgggatcccttcccggaccctgcatatgc 14617167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 11596581 - 11596641
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||    
T  11596581 cagggtaaggctgcgtataatacaccaaatggtgggaccccttcctggaccctgcgtatgc 11596641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 15505633 - 15505693
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  15505633 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgc 15505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 18724634 - 18724574
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| ||||||||||||||||  ||| ||||||||||||||||| |||||||    
T  18724634 cagggtaaggctgtgtacaatacaccaaatcttgggaccccttcccggaccctacatatgc 18724574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 19932844 - 19932781
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||||    
T  19932844 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgca 19932781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 20036291 - 20036351
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  20036291 agggtaagattgcgttcaatacaccaaatggtggaaccccttcccggaccctgcgtatgca 20036351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 23768409 - 23768349
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| |||||||| |||||    
T  23768409 cagggtaaggctgcgtacaatacaccaaatggtgggacaccttcccagaccctgcgtatgc 23768349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 18944712 - 18944774
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  18944712 cagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgc 18944774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 30395817 - 30395755
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  30395817 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 30395755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 45812625 - 45812566
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||||    
T  45812625 agggtaaggctgcatacaatacaccaaatggtgggaccccttcccaaaccctgcatatgc 45812566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 46991873 - 46991932
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  46991873 cagggtaaggctgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatg 46991932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 27474349 - 27474435
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||| || ||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| |||||||||    
T  27474349 cagggcaaagctgcgtacaatacactgaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccggattgccc 27474435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 35117857 - 35117801
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||    
T  35117857 cagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgc 35117801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 23796538 - 23796594
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||| |||||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  23796538 gtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgc 23796594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 25468356 - 25468292
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| |||||||||||||||||||| | | ||| |||||| |||||||| |||||    
T  25468356 aaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttcccagaccctgcgtatgc 25468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 27201716 - 27201804
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||       ||| |||||||||||||||||||| ||| ||||||    
T  27201716 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggacc------ttgcgtatgcgggagctttagtgcattgggttgccc 27201804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 6925170 - 6925229
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| |||||||||| |||| ||| |||||||||||| |||||| |||||    
T  6925170 agggtaaggctgcggacaatacaccgaatggtgggaccccttcccggtccctgcgtatgc 6925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 18742048 - 18741986
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||| |||||||| |||||    
T  18742048 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgc 18741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 313
Target Start/End: Complemental strand, 21910737 - 21910686
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccct 313  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||| |||||    
T  21910737 agggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccct 21910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 35005192 - 35005254
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| |||||||||||  ||||| ||| ||||||||||||||||||| |||||    
T  35005192 cagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgc 35005254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 45402175 - 45402251
Alignment:
Q  271 ctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||| ||| |||||||||| |||||      ||| ||||||||||||||||||||| || ||||||    
T  45402175 ctgcgtacaatacaccaaatggtgggaccccttcccagaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 6358186 - 6358252
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||||||||||| ||||||||||| ||||| ||||| ||| |||||||||| |||||||| ||||||    
T  6358186 aaatcagggtaaagctgcgtacaaaacaccaaaatggtgggaccccttcccagaccctgcgtatgca 6358252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 6983900 - 6983846
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    |||||||||  |||||||||||||||||||| ||| ||||||| |||||||||||    
T  6983900 cagggtaagtatgcgtacaatacaccaaatggtgggacccctttccggaccctgc 6983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 21723753 - 21723811
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||| ||||||||||||||||| | |||||  |||||||||||||| ||||    
T  21723753 agggtaaggctgagtacaatacaccaaatggtagaaccttttcccggaccctgcgtatg 21723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 43768208 - 43768262
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  43768208 cagggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgc 43768262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 353
Target Start/End: Complemental strand, 20004178 - 20004093
Alignment:
Q  264 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||| |||||       |||||||||||||||||||||||| || ||||||    
T  20004178 ggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20004093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 44485195 - 44485150
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccgga 309  Q
    |||||||||||||||||||||||||||| | | |||||||||||||    
T  44485195 ggtaaggctgcgtacaatacaccaaatggttggaccccttcccgga 44485150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 1517395 - 1517339
Alignment:
Q  266 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||||||||||||||| || ||| |||||||| | |||||||| ||||||    
T  1517395 taaggctgcgtacaatacaccaattggtgggaccccttctcagaccctgcgtatgca 1517339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 20999933 - 20999885
Alignment:
Q  267 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    |||||||||||||||||||||||||||||  |||||||| | |||||||    
T  20999933 aaggctgcgtacaatacaccaaatgatggggccccttccggcaccctgc 20999885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 34149048 - 34148988
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||| ||||||||| | |||||||| ||  ||||||||| ||||||||||||||||    
T  34149048 agggtaaggttgcgtacaaaagaccaaatggtgagaccccttcctggaccctgcatatgca 34148988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 42304298 - 42304210
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||| |||||||||||||| |||  || ||| ||||||||||||||||      ||| |||| |||||||||||||||| |||||||||    
T  42304298 cagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccc------tgcgtatgtgggagctttagtgcaccggattgccc 42304210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 303
Target Start/End: Complemental strand, 4430080 - 4430046
Alignment:
Q  269 ggctgcgtacaatacaccaaatgatggaacccctt 303  Q
    ||||||||||||||||||||||| |||||||||||    
T  4430080 ggctgcgtacaatacaccaaatggtggaacccctt 4430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 31442479 - 31442429
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggac 310  Q
    |||||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  31442479 cagggtaaggatgcgtacaatacaccaaaatggtgggaccccttcccggac 31442429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 10668297 - 10668382
Alignment:
Q  264 ggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||| ||||||||||||||||  |||| ||| |||||||||||| |||      ||| ||||||||||||||||||||| || ||||||    
T  10668297 ggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10668382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 8197115 - 8197171
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||| |||||| ||||||||||| | | |||||||| |||||||||| ||||    
T  8197115 ggtaaggctacgtacagtacaccaaatggtaggaccccttctcggaccctgcgtatg 8197171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 17470435 - 17470407
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa 289  Q
    |||||||||||||||||||||||||||||    
T  17470435 cagggtaaggctgcgtacaatacaccaaa 17470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 28894651 - 28894587
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||| || ||||| ||||||||||||| |||||| |  ||||||||||  ||||||||||||||    
T  28894651 aaatccggataaggttgcgtacaatacatcaaatggtaaaaccccttcctagaccctgcatatgc 28894587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 48728 - 48663
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  48728 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 48663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 12670344 - 12670279
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  12670344 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 12670279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 19729381 - 19729472
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||      ||||||| |||||||| ||||||||||||||||||    
T  19729381 taaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccc------tgcatatacgggagctctagtgcactggattgccc 19729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 2626568 - 2626628
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2626568 cagggtaagactgcgtacaatacaccaaatgatgggaccccttcccagaccctgcatatgc 2626628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 13160747 - 13160807
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  13160747 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 13160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 29877140 - 29877200
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  29877140 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 29877200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 36720842 - 36720902
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  36720842 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 36720902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 8897852 - 8897793
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8897852 agggtaaggctacgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 8897793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 24365152 - 24365089
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  24365152 aaatcagggtaaggctgcgaacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 24365089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 30454183 - 30454126
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  30454183 ggtaaggctgcgtacgatacaccaaatggtgggaccccttcccggaccctgcatatgc 30454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 5135377 - 5135317
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  5135377 agggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgca 5135317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 28817715 - 28817655
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||    
T  28817715 cagggtaaggctgcgtacaatacacccaatggtgggaccccttcccggaccctgcgtatgc 28817655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 44530195 - 44530255
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||    
T  44530195 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgc 44530255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 45071310 - 45071370
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  45071310 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgc 45071370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 5689677 - 5689736
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||    
T  5689677 cagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatg 5689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 17823622 - 17823683
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  17823622 caggataagactgcgtaaaatacaccaaatggtggaaccccttcccgaaccctgcatatgca 17823683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 35261725 - 35261811
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||| ||||||      ||| ||||||||||||||||||||| || ||||||    
T  35261725 cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcctggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 35261811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 7136618 - 7136556
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  7136618 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 7136556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 20284159 - 20284098
Alignment:
Q  262 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  20284159 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 20284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 21070787 - 21070726
Alignment:
Q  262 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  21070787 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 21070726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 12625936 - 12626022
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  12625936 cagggtaagactgcatacaatacaccaaatggtgggaccccctcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 12626022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 389691 - 389751
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||||||||||||||||||||| | ||||| || |||||||| |||||    
T  389691 cagggtaaggttgcgtacaatacaccaaatgatgggatccctttcctgaccctgcgtatgc 389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 20869969 - 20870057
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||| ||||||       |||||||||||||||||||||||| || ||||||    
T  20869969 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 20870057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 26954179 - 26954267
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||| ||||        ||||||||||||||||||||||||||| ||||||    
T  26954179 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacc------tcgcatatgcgggagctttagtgcactgggttgccc 26954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 29521774 - 29521714
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |||| |||||||| |||||    
T  29521774 cagggtaaggctgcgtacaatacaccaaatggtgggaacccatcccagaccctgcgtatgc 29521714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 20869592 - 20869529
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||||||    
T  20869592 taaaacagggtaaggctgtgtacaatacaccaa--ggtgagaccccttcccggaccctgcatatgc 20869529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 26102578 - 26102623
Alignment:
Q  276 tacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccggaccctgcttatgc 26102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 6760868 - 6760956
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||| ||||||||||||||  |||| ||| |||||||| |||||||       |||||||||||||||||||||||| || ||||||    
T  6760868 cagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 6760956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 8484027 - 8483967
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||| |||||||||||||||||||||| || ||| ||||| |||| |||||||| |||||    
T  8484027 cagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgc 8483967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 18164849 - 18164789
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||||||||||||||| ||||  |||  |||||||||||||| |||||    
T  18164849 cagggtaaggttgcgtacaatacaccaaaggatgtgaccatttcccggaccctgcgtatgc 18164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 39461081 - 39460997
Alignment:
Q  265 gtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||  |||| ||  ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  39461081 gtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 39460997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 16225065 - 16225127
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| |||||||||||||||||  |||| ||| | |||||||||||||| ||||||||    
T  16225065 cagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgc 16225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 297
Target Start/End: Original strand, 28873245 - 28873280
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaa 297  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28873245 agggtaaggttgcgtacaatacaccaaatgatggaa 28873280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 25250569 - 25250630
Alignment:
Q  262 agggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||| |||||||||||||||||||  |||| ||| ||||||||||| |||| ||||||||    
T  25250569 agggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgc 25250630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 10857875 - 10857961
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||| |||||||||||| || ||| ||| ||||| |||||       ||| ||||||||||||||||||||| || ||||||    
T  10857875 cagggtaaggctgcgcacaatacaccaattggtgggaccacttcctggacc------ttgcgtatgcgggagctttagtgcaccgggttgccc 10857961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 44742608 - 44742555
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccct 313  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||  |||||||    
T  44742608 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcttggaccct 44742555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 11001033 - 11000985
Alignment:
Q  266 taaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    |||||||| ||||||||||||||||| ||| |||||| |||| ||||||    
T  11001033 taaggctgtgtacaatacaccaaatggtgggacccctacccgaaccctg 11000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 23286419 - 23286375
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccc 300  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||    
T  23286419 taaaacagggtaaagctgcgtacaatacaccaaatggtgggaccc 23286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 26457776 - 26457816
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaacccct 302  Q
    ||||||||||||||||||||||||||| || ||| ||||||    
T  26457776 agggtaaggctgcgtacaatacaccaattggtgggacccct 26457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 43942370 - 43942398
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaa 289  Q
    |||||||||||||||||||||||||||||    
T  43942370 cagggtaaggctgcgtacaatacaccaaa 43942398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 21172103 - 21172038
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21172103 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 21172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 42391194 - 42391129
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  42391194 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 42391129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 10693161 - 10693076
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| ||||||||||| ||||||    
T  10693161 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcactgggttgccc 10693076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 32758300 - 32758365
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32758300 taaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 32758365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 48735208 - 48735151
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  48735208 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 48735151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 7879687 - 7879744
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  7879687 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 7879744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 42798718 - 42798775
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  42798718 ggtaaggctgcgtacaatacaccaaatggtgggaccctttcccggaccctgcatatgc 42798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 18512541 - 18512456
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||      ||| |||||||||||||| ||||||||| ||||||    
T  18512541 agggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttggtgcactgggttgccc 18512456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 27889399 - 27889345
Alignment:
Q  267 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  27889399 aaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 27889345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 11617677 - 11617616
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  11617677 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgca 11617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 19265861 - 19265910
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggacc 311  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  19265861 agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc 19265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 2541108 - 2541048
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||| |||||| |||||    
T  2541108 cagggtaaggctgcgtactatacaccaaatggtgggaccccttcccggtccctgcgtatgc 2541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 19266496 - 19266556
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||  ||| | ||||||||||||||||| |||||    
T  19266496 cagggtaaggctgcgtacaatacaccaaattgtgggatcccttcccggaccctgcgtatgc 19266556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 27629680 - 27629740
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| ||||||||||||    
T  27629680 cagggtaaggttgcgtaaaatacaccaaatggtgggaccccttcccgggccctgcatatgc 27629740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 28362231 - 28362175
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||    
T  28362231 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccttgcatatg 28362175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 34626297 - 34626237
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||| |||||||||||||| ||| | ||||||||||||||||| |||||    
T  34626297 cagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccggaccctgcgtatgc 34626237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 38604572 - 38604632
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||| |||||    
T  38604572 cagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgc 38604632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 46354240 - 46354302
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  46354240 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 47716505 - 47716567
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||    
T  47716505 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 47716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 1408506 - 1408564
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||||||||| |||||||||| |||||| ||| ||||||||||||||||||| ||||||    
T  1408506 ggtaaggctgtgtacaatacagcaaatggtgggaccccttcccggaccctgcgtatgca 1408564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 40463924 - 40463982
Alignment:
Q  263 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||| ||||||||||||| ||| |||||||| |||||||||| |||||    
T  40463924 gggtaaggctgcgtataatacaccaaatggtgggaccccttctcggaccctgcgtatgc 40463982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 23231606 - 23231663
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||    
T  23231606 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgc 23231663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 31591203 - 31591138
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||| ||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||    
T  31591203 taaaacagagtaaggctgcgtacaatacaataaatggtgggaccccttcccggaccttgcatatgc 31591138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 33871999 - 33871946
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  33871999 caggataaggctgcgtacaatacaccaaatggtgggaccccttcccagaccctg 33871946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 35334905 - 35334844
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||| ||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  35334905 cagggtaagactgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgca 35334844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 42805570 - 42805658
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||| |||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  42805570 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 42805658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 11741840 - 11741887
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccgga 309  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||    
T  11741840 agggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgga 11741887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 19426977 - 19426919
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||    
T  19426977 agggtaagactgcgtacaatacaccaaatggtggga-cccttctcggaccctgcatatgc 19426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 13805149 - 13805207
Alignment:
Q  263 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||| ||||||||||||||||| ||| ||| ||||| ||||||||| |||||    
T  13805149 gggtaaggctgtgtacaatacaccaaatggtgggaccacttcctggaccctgcgtatgc 13805207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 38262270 - 38262199
Alignment:
Q  276 tacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||| ||||||||||| || |      ||| ||||||||||||||||||||| |||||||||    
T  38262270 tacaatacaccaaatgatgggaccccttcccgaacac------tgcgtatgcgggagctttagtgcaccggattgccc 38262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 14099095 - 14099034
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||    
T  14099095 caggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgca 14099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 14409112 - 14409051
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||    
T  14409112 caggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgca 14409051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 35787355 - 35787298
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||| ||||||||||||||||||||  || ||||||||||||||| ||| |||||    
T  35787355 ggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgc 35787298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 42476920 - 42476961
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 305  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  42476920 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 8149033 - 8148989
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttccc 306  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||    
T  8149033 agggtaaggttgcgtacaatacaccaaatggtgggaccccttccc 8148989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 18747533 - 18747593
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||| | ||||||| |||||    
T  18747533 cagggtaaggctgcgtataatacaccaattggtgggaccccttcctgaaccctgcgtatgc 18747593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 23419763 - 23419719
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 305  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  23419763 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 23419719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 28078221 - 28078161
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| ||| | |||||||||||||| ||| ||||||||||| | |||||||||||    
T  28078221 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgc 28078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 2663023 - 2662965
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  2663023 agggtaaggctgcgtacaatacaccaaatggtggga-cccttttcagaccctgcatatgc 2662965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 17048905 - 17048856
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccgga 309  Q
    |||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  17048905 cagggtaaggttacgtacaatacaccaaaatggtggaaccccttcccgga 17048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 45019010 - 45018952
Alignment:
Q  267 aaggctgcgtacaatacaccaaa----tgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||| ||||||    || ||||||||||||||||||||||| |||||    
T  45019010 aaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgc 45018952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 39123945 - 39124000
Alignment:
Q  267 aaggctgcgtacaatacaccaaa--tgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||| |||||||||||  || ||| ||||||||||||||||||| ||||    
T  39123945 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 39124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 48123573 - 48123513
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||  |||| |||||||||||||||| ||| ||||||| | ||||| |||||||||    
T  48123573 cagggtaaaactgcatacaatacaccaaatggtgggacccctttctggaccatgcatatgc 48123513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 22123011 - 22122946
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  22123011 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 22122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 34771458 - 34771393
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  34771458 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 34771393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 15797283 - 15797347
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15797283 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatg 15797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 1217151 - 1217216
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  1217151 taaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccctgcatatgc 1217216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 31592910 - 31592975
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  31592910 taaaacagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgc 31592975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 40272901 - 40272815
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  40272901 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 40272815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 39203577 - 39203668
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||       ||||||||||||||||||||||||| || ||||||    
T  39203577 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggacc------ttgcatatgcgggagctttagtgcaccgggttgccc 39203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 54484762 - 54484845
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  54484762 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 54484845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 47624109 - 47624162
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  47624109 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctg 47624162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 6411911 - 6411851
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||    
T  6411911 cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcgtatgc 6411851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 16735508 - 16735568
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||    
T  16735508 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacactgcgtatgc 16735568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 22609833 - 22609893
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  22609833 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgc 22609893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 26869774 - 26869860
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||      |||| |||||||||||||| |||||| || ||||||    
T  26869774 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttgccggacc------atgcgtatgcgggagctttggtgcaccgggttgccc 26869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 353440 - 353352
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  353440 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 353352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 9276332 - 9276391
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||    
T  9276332 cagggtaaggctgcgtacaatacaccaaatggtgg-accctttcccggaccctgcgtatgc 9276391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 12914124 - 12914064
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||| ||||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  12914124 cagggtaaggcggcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgc 12914064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 13628881 - 13628793
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  13628881 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 13628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 26573195 - 26573255
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| || ||| ||||| ||||||||||||| |||||    
T  26573195 cagggtaaggctgcgtacaatacaccaattggtgggaccccatcccggaccctgcgtatgc 26573255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 29366811 - 29366723
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||      ||| |||| ||||||||||||||||||| ||||||    
T  29366811 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgtgggagctttagtgcactgggttgccc 29366723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 52926304 - 52926248
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggacaccttcccggaccctgcgtatgc 52926248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 54374434 - 54374374
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaa-tgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||    
T  54374434 agggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggaccctgcatatgc 54374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 46421126 - 46421064
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  46421126 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgc 46421064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 26292393 - 26292458
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||||| | |||||| |||||||||||||||| | ||||||||| |||||||||||||    
T  26292393 taaaacagggtaagaccgcgtacgatacaccaaatgatgggatcccttcccgaaccctgcatatgc 26292458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 33926150 - 33926211
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca-aatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  33926150 cagggtaaggctgtgtacaatacaccataatggtgggaccccttcctggaccctgcatatgc 33926211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 45786305 - 45786249
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  45786305 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc 45786249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 13730693 - 13730605
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||| |||||||||||||  |||| ||| ||||||||||||||||       |||||||||||||||||||||||| || ||||||    
T  13730693 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccc------cgcatatgcgggagctttagtgcaccgggttgccc 13730605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 49013564 - 49013505
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcata 318  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||    
T  49013564 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcata 49013505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 10795514 - 10795452
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||| |||||    
T  10795514 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 10795452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 14987025 - 14987087
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||  |||| ||| |||| |||||||||| |||||||||    
T  14987025 cagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgc 14987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 45948926 - 45948867
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| ||||||||||||| || ||| |||||||| |||||||||| |||||    
T  45948926 agggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgcgtatgc 45948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 7696981 - 7696922
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||| |||||||||||||||||||||||||||||||      ||||||||||||| |||||||||    
T  7696981 taaaacagggtaaggctgcgtacaatacaccaaatg-----gccccttcccggacactgcatatg 7696922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 25517251 - 25517199
Alignment:
Q  269 ggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||    
T  25517251 ggctgcgtacaatacacaaaatggtgggaccccttcccggatcctgcgtatgc 25517199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 34420733 - 34420673
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||||||| ||||||| ||||| ||| ||||||||||||||| ||| ||||    
T  34420733 cagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccggaccttgcgtatg 34420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 52428566 - 52428526
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaacccc 301  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  52428566 cagggtaaggctgcgtacaatacaccaaatagtggaacccc 52428526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 4495753 - 4495714
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccc 300  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  4495753 cagggtaaggctgcgtacaatacaccaaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 8247778 - 8247716
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| ||||||||||||||||  |||| ||| || |||||||||||||||| |||||    
T  8247778 cagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgc 8247716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 9607271 - 9607333
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||| |||||||||  |||| ||| |||||||||| ||||| ||||||||    
T  9607271 cagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgc 9607333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 30928233 - 30928177
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||| || ||| |||||||||| ||  || ||||||||||||||||||||||||    
T  30928233 ggtaaggttgtgtaaaatacaccaattggcgggaccccttcccggaccctgcatatg 30928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 53996655 - 53996595
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||||||| ||||||||||| ||||| ||| |||||||||| ||| |||| ||||    
T  53996655 cagggtaaggctgcttacaatacaccaaaatggtgggaccccttccctgacactgcgtatg 53996595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 24220 - 24136
Alignment:
Q  263 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||      ||||||||||| |||||||| |||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcat------atgcgggagctctagtgcaccggattgccc 24136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 9671220 - 9671311
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  9671220 taaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 9671311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 10546209 - 10546295
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  10546209 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10546295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 21779355 - 21779290
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21779355 taaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 21779290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 8455405 - 8455345
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  8455405 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgc 8455345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 17623606 - 17623669
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  17623606 aaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaatcctgcgtatg 17623669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 17668044 - 17668102
Alignment:
Q  257 aaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  17668044 aaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcgaaccctgc 17668102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 36871538 - 36871623
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||       ||| ||||||||||||||||||||| || ||||||    
T  36871538 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc-------tgcgtatgcgggagctttagtgcaccgggttgccc 36871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 22371100 - 22371153
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22371100 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctg 22371153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 12024008 - 12023954
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  12024008 cagggtaaggctgcgtacaatacaccaaatggtgggaccccctcccggaccctgc 12023954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 352
Target Start/End: Complemental strand, 24860070 - 24859992
Alignment:
Q  268 aggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgcc 352  Q
    |||||||||||||||||||||||| | |||||||||| |||||||      ||| ||||||||||||||||||||| ||||||||    
T  24860070 aggctgcgtacaatacaccaaatggtagaaccccttctcggaccc------tgcgtatgcgggagctttagtgcaccggattgcc 24859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 10543744 - 10543832
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  10543744 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 10543832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 14444774 - 14444834
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| |||||    
T  14444774 cagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccggaccctgcgtatgc 14444834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 25249827 - 25249767
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||| |||||    
T  25249827 cagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgaaccctgcgtatgc 25249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 23397811 - 23397870
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  23397811 agggtaaggctacgtacaatacaccaaatggtgggaccccttctcggaccctacatatgc 23397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 17380326 - 17380272
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgc 315  Q
    |||||||||| || || |||||||||||||||||||||||||||| |||||||||    
T  17380326 cagggtaaggttgtgtgcaatacaccaaatgatggaaccccttcctggaccctgc 17380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 17896307 - 17896365
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||||||||||| |||||||| ||| |||||||| |||||||||| ||||    
T  17896307 agggtaaggctgcgtacaatataccaaatggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 24890460 - 24890518
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||||||||| ||||||    
T  24890460 ggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgca 24890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 25079803 - 25079745
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  25079803 ggtaaggatgcgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgca 25079745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 11514486 - 11514567
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||||||||||||||||||||| ||| | |||||||| |||||      ||| ||||||||||||||||||||| |||||||||    
T  11514486 gtaaggctgcgtacaatacaccaaatggtggga-cccttcccagaccc------tgcgtatgcgggagctttagtgcaccggattgccc 11514567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 32781377 - 32781324
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||    
T  32781377 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagaccctg 32781324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 14530364 - 14530452
Alignment:
Q  261 cagggtaaggctgcgtacaatacacca--aatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    |||||||||||| ||||||||||||||  |||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  14530364 cagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 14530452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 99348 - 99301
Alignment:
Q  267 aaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctg 314  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||    
T  99348 aaggctgcgtacaatacaccaaatggtggaaccccttctcagaccctg 99301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 4516440 - 4516381
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||| || ||||||||||||||||||| || ||| ||||||||||||||||||| ||||    
T  4516440 cagggcaacgctgcgtacaatacaccaattggtgggaccccttcccggaccctgcgtatg 4516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 13245181 - 13245126
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatat 319  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||||| |||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccccttcccggaccatgcatat 13245126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 21377162 - 21377103
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    ||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||| ||||    
T  21377162 cagggtaaggctgggtacaatgcaccaaatggtgggaccccttcccgaaccctgcgtatg 21377103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 30826083 - 30826141
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||| |||||| |||||||    
T  30826083 agggtaaggttgcgtacaatacaccaaatggtggaa-cccttcccagaccctacatatgc 30826141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 5450335 - 5450384
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccct 313  Q
    |||||||||||||||||||||||||| | ||| ||||||||| |||||||    
T  5450335 ggtaaggctgcgtacaatacaccaaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 40762321 - 40762264
Alignment:
Q  263 gggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatg 320  Q
    |||||||||| |||||||||||||||||| ||| |||| |||| ||||||||| ||||    
T  40762321 gggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatg 40762264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 24200714 - 24200659
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc--aaatgatggaaccccttcccggaccctg 314  Q
    ||||||||||||||||||||||||||  ||||| ||| | ||||||||||||||||    
T  24200714 cagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctg 24200659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 44643573 - 44643629
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||  |||||||| ||| |||||||||| |||||||| |||||    
T  44643573 gtaaggctgcgtacaatgtaccaaatggtgggaccccttcccagaccctgcgtatgc 44643629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 23145783 - 23145736
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccc 312  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||||    
T  23145783 gtaaggctgcgtacaatacaccaattggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 23557573 - 23557526
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccc 312  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||||    
T  23557573 gtaaggctgcgtacaatacaccaattggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 27573669 - 27573704
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaacc 299  Q
    |||||||||||||||||||||||||||| |||||||    
T  27573669 ggtaaggctgcgtacaatacaccaaatggtggaacc 27573704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 44449473 - 44449418
Alignment:
Q  261 cagggtaaggctgcgtacaatacacc-aaatgatggaaccccttcccggaccctgc 315  Q
    |||| ||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  44449473 caggataaggctgcgtacaatacaccaaaatagtgggaccccttcccggaccctgc 44449418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 5841075 - 5841136
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaa--atgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||| ||||||||||||| |||  ||| ||| |||||||||||||||| ||||||||    
T  5841075 agggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgc 5841136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 4794871 - 4794908
Alignment:
Q  284 accaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  4794871 accaaatgatgggaccccttcccggatcctgcatatgc 4794908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 26684706 - 26684649
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||| || ||||| ||| ||| ||||||| ||||||| |||||    
T  26684706 ggtaaggctgcgtacaatatactaaatggtgggacctcttcccgaaccctgcgtatgc 26684649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 31821431 - 31821390
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaacccctt 303  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  31821431 agggtaaggttgtgtacaatacaccaaatgatgggacccctt 31821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 25641547 - 25641607
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||| | |||||||||||||||||||  ||| ||||||||||| | ||||| |||||    
T  25641547 cagggtaaagttgcgtacaatacaccaaattgtgggaccccttcccgaatcctgcgtatgc 25641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 40416960 - 40416900
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||| ||||||| |||||||||||||| |||||| |||| ||   |||||||||||||||    
T  40416960 cagggaaaggctgtgtacaatacaccaattgatgggacccttttttggaccctgcatatgc 40416900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 30618 - 30683
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30618 taaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgc 30683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 46878 - 46963
Alignment:
Q  262 agggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgccc 353  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||      ||| ||||||||||||||||||||| || ||||||    
T  46878 agggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcaccgggttgccc 46963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 24861 - 24801
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||| |||||    
T  24861 cagggtaaggctgcgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtatgc 24801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 43706 - 43764
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaacccc-ttcccggaccctgcatatgc 321  Q
    |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||    
T  43706 ggtaaggctgcgtacaatacaccaaatggtgggacccctttctcggaccctgcatatgc 43764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 10856 - 10940
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgcatatgcgggagctttagtgcactggattgc 351  Q
    ||||||| |||||||| |||||||||||||| ||| ||||||||||||||||      ||| |||||||||||||||||||||||| ||||    
T  10856 cagggtagggctgcgtccaatacaccaaatggtgggaccccttcccggaccc------tgcgtatgcgggagctttagtgcactgggttgc 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 10144 - 10078
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| ||| ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  10144 taaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgca 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 20472 - 20406
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgca 322  Q
    |||| ||| ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  20472 taaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgca 20406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 1681 - 1616
Alignment:
Q  256 taaatcagggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||| || |||||    
T  1681 taaaacaggataaggctgcatacaatacaccaaatgatgggaccccttcccggacccggcgtatgc 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 11179 - 11235
Alignment:
Q  265 gtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||    
T  11179 gtaaggctgcttacaatacaccaaatggtgggacaccttcccggaccctgcatatgc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 3593 - 3650
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||    
T  3593 ggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgc 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 13110 - 13053
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| |||||||| |||||    
T  13110 ggtaaggctgcgtacaatacaccgaatggtgggaccccttcccagaccctgcgtatgc 13053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 72953 - 72896
Alignment:
Q  264 ggtaaggctgcgtacaatacaccaaatgatggaaccccttcccggaccctgcatatgc 321  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||| ||||| |||||    
T  72953 ggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgtatgc 72896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 35106 - 35062
Alignment:
Q  261 cagggtaaggctgcgtacaatacaccaaatgatggaaccccttcc 305  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||    
T  35106 cagggtaaggctgcgtacaatacaccaaatggtgggaccctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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