View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2888-Insertion-26 (Length: 326)

Name: NF2888-Insertion-26
Description: NF2888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2888-Insertion-26
NF2888-Insertion-26
[»] chr5 (50 HSPs)
chr5 (8-326)||(20512400-20512722)
chr5 (218-326)||(32391722-32391831)
chr5 (211-326)||(36798377-36798494)
chr5 (213-320)||(43098026-43098135)
chr5 (211-326)||(6130251-6130367)
chr5 (218-326)||(35166494-35166604)
chr5 (209-326)||(3333686-3333804)
chr5 (215-326)||(28446205-28446318)
chr5 (218-326)||(2974834-2974945)
chr5 (208-326)||(3999079-3999198)
chr5 (214-322)||(20629735-20629846)
chr5 (218-309)||(35877498-35877590)
chr5 (213-326)||(40276016-40276131)
chr5 (218-326)||(12406044-12406153)
chr5 (213-326)||(24405698-24405813)
chr5 (218-326)||(39574242-39574349)
chr5 (214-326)||(24405489-24405603)
chr5 (218-323)||(25910926-25911036)
chr5 (218-306)||(27904704-27904794)
chr5 (213-326)||(16132930-16133046)
chr5 (210-326)||(19340759-19340873)
chr5 (213-326)||(36798168-36798284)
chr5 (218-324)||(37897921-37898028)
chr5 (211-326)||(19131701-19131816)
chr5 (218-326)||(31080480-31080589)
chr5 (209-325)||(22300814-22300928)
chr5 (211-326)||(12406241-12406358)
chr5 (218-321)||(30604293-30604398)
chr5 (236-306)||(32391940-32392012)
chr5 (218-306)||(20629965-20630056)
chr5 (218-326)||(3333902-3334012)
chr5 (268-326)||(30603667-30603725)
chr5 (215-307)||(25364047-25364139)
chr5 (218-326)||(43098228-43098335)
chr5 (267-326)||(21066541-21066600)
chr5 (219-295)||(34319964-34320041)
chr5 (265-326)||(2974685-2974746)
chr5 (250-322)||(16132780-16132853)
chr5 (278-326)||(9852986-9853034)
chr5 (235-288)||(26702652-26702707)
chr5 (235-288)||(26972385-26972440)
chr5 (207-326)||(8284147-8284266)
chr5 (278-321)||(31080686-31080729)
chr5 (272-323)||(39574442-39574493)
chr5 (265-323)||(9852839-9852896)
chr5 (216-303)||(24134369-24134458)
chr5 (281-326)||(37897785-37897830)
chr5 (213-306)||(40276250-40276346)
chr5 (218-323)||(24779478-24779585)
chr5 (278-326)||(25910788-25910836)
[»] chr8 (47 HSPs)
chr8 (214-326)||(41487411-41487524)
chr8 (212-326)||(45456963-45457077)
chr8 (214-326)||(25144144-25144255)
chr8 (213-324)||(41487198-41487311)
chr8 (213-326)||(17070905-17071019)
chr8 (213-326)||(17577253-17577367)
chr8 (215-326)||(27545557-27545669)
chr8 (212-326)||(37263355-37263474)
chr8 (218-326)||(6807176-6807284)
chr8 (207-326)||(20853370-20853489)
chr8 (237-326)||(3676141-3676230)
chr8 (220-326)||(22192307-22192414)
chr8 (232-325)||(14880537-14880631)
chr8 (221-319)||(33298545-33298641)
chr8 (218-323)||(9762405-9762510)
chr8 (235-326)||(26824034-26824126)
chr8 (218-305)||(41602833-41602922)
chr8 (221-299)||(16982632-16982712)
chr8 (265-326)||(37813292-37813353)
chr8 (213-298)||(37813160-37813247)
chr8 (216-296)||(25896991-25897073)
chr8 (250-326)||(30539192-30539270)
chr8 (209-324)||(39889766-39889881)
chr8 (213-326)||(35213029-35213141)
chr8 (218-321)||(20228234-20228338)
chr8 (218-322)||(23702126-23702234)
chr8 (215-323)||(37939914-37940021)
chr8 (265-325)||(44101491-44101550)
chr8 (272-324)||(44269180-44269232)
chr8 (209-326)||(45522392-45522511)
chr8 (209-324)||(29657904-29658018)
chr8 (213-324)||(521647-521758)
chr8 (272-326)||(30539047-30539101)
chr8 (218-306)||(32071236-32071322)
chr8 (265-325)||(22846495-22846555)
chr8 (218-326)||(18093280-18093389)
chr8 (265-324)||(21486706-21486765)
chr8 (218-306)||(26823829-26823919)
chr8 (236-326)||(29657721-29657816)
chr8 (250-324)||(44101325-44101400)
chr8 (218-268)||(521527-521577)
chr8 (272-306)||(6807390-6807424)
chr8 (211-306)||(23702356-23702452)
chr8 (218-325)||(45177204-45177313)
chr8 (272-321)||(21486857-21486906)
chr8 (265-326)||(41602535-41602595)
chr8 (218-262)||(9499224-9499268)
[»] chr2 (48 HSPs)
chr2 (218-326)||(14489413-14489521)
chr2 (214-326)||(34761061-34761175)
chr2 (210-326)||(35718857-35718974)
chr2 (211-326)||(37431739-37431855)
chr2 (216-326)||(6510201-6510312)
chr2 (226-326)||(6592935-6593035)
chr2 (218-326)||(19206145-19206253)
chr2 (218-326)||(31827734-31827842)
chr2 (218-326)||(34679294-34679401)
chr2 (218-325)||(18709250-18709356)
chr2 (211-326)||(43028995-43029111)
chr2 (218-326)||(32969726-32969838)
chr2 (213-324)||(43028792-43028904)
chr2 (218-324)||(36176984-36177089)
chr2 (216-326)||(4576544-4576656)
chr2 (265-326)||(39918643-39918704)
chr2 (218-326)||(15023040-15023149)
chr2 (216-326)||(5470331-5470440)
chr2 (218-326)||(16043223-16043336)
chr2 (218-322)||(19895616-19895723)
chr2 (218-324)||(24472650-24472755)
chr2 (235-326)||(4925648-4925737)
chr2 (235-323)||(21361900-21361990)
chr2 (237-321)||(24306037-24306122)
chr2 (213-324)||(34679095-34679208)
chr2 (207-326)||(44297555-44297674)
chr2 (213-326)||(14943746-14943859)
chr2 (237-326)||(27489637-27489729)
chr2 (265-326)||(34100792-34100853)
chr2 (218-321)||(37803337-37803443)
chr2 (226-326)||(18224934-18225033)
chr2 (234-322)||(25333518-25333607)
chr2 (218-289)||(5362178-5362251)
chr2 (272-326)||(36195649-36195702)
chr2 (221-326)||(5470538-5470643)
chr2 (233-321)||(14943554-14943643)
chr2 (213-326)||(44617940-44618053)
chr2 (214-262)||(12948888-12948936)
chr2 (250-326)||(34760881-34760960)
chr2 (217-279)||(2609080-2609143)
chr2 (213-321)||(14489212-14489321)
chr2 (218-326)||(15022841-15022950)
chr2 (250-324)||(27489469-27489543)
chr2 (218-326)||(31827528-31827638)
chr2 (218-326)||(39918437-39918547)
chr2 (212-326)||(25377-25498)
chr2 (220-323)||(24472451-24472556)
chr2 (218-262)||(6592727-6592771)
[»] scaffold0062 (1 HSPs)
scaffold0062 (221-326)||(46082-46189)
[»] chr6 (33 HSPs)
chr6 (218-326)||(28011327-28011435)
chr6 (210-326)||(12766416-12766533)
chr6 (218-326)||(3579598-3579707)
chr6 (213-326)||(1377409-1377522)
chr6 (213-326)||(1385157-1385270)
chr6 (219-326)||(10727395-10727504)
chr6 (209-326)||(10727184-10727303)
chr6 (218-326)||(33401256-33401364)
chr6 (208-326)||(238923-239040)
chr6 (218-326)||(2840792-2840902)
chr6 (222-322)||(2853435-2853536)
chr6 (219-321)||(26601666-26601769)
chr6 (225-326)||(32143452-32143555)
chr6 (219-326)||(20474906-20475014)
chr6 (218-326)||(17248843-17248952)
chr6 (218-326)||(266125-266234)
chr6 (218-304)||(5003092-5003178)
chr6 (222-323)||(18030944-18031043)
chr6 (250-306)||(26601496-26601553)
chr6 (236-325)||(18604125-18604216)
chr6 (212-306)||(30349346-30349441)
chr6 (218-326)||(6036647-6036757)
chr6 (233-326)||(11351845-11351937)
chr6 (265-326)||(2853616-2853677)
chr6 (218-319)||(30349563-30349667)
chr6 (250-323)||(5003283-5003358)
chr6 (214-326)||(32143257-32143371)
chr6 (218-326)||(33399789-33399897)
chr6 (272-326)||(2203353-2203407)
chr6 (272-326)||(17532310-17532364)
chr6 (214-262)||(5607016-5607065)
chr6 (266-326)||(266312-266371)
chr6 (278-326)||(26311605-26311653)
[»] chr7 (55 HSPs)
chr7 (214-324)||(18186438-18186550)
chr7 (213-326)||(4049923-4050037)
chr7 (218-325)||(8074076-8074186)
chr7 (213-326)||(20185118-20185231)
chr7 (218-324)||(36580277-36580384)
chr7 (209-306)||(6792017-6792116)
chr7 (213-326)||(28350114-28350229)
chr7 (219-325)||(28785760-28785869)
chr7 (213-326)||(14247292-14247406)
chr7 (213-326)||(15348158-15348274)
chr7 (216-323)||(23746093-23746207)
chr7 (236-322)||(5172729-5172818)
chr7 (213-326)||(17876359-17876473)
chr7 (218-315)||(11373850-11373949)
chr7 (214-324)||(19645006-19645116)
chr7 (265-325)||(11374002-11374061)
chr7 (218-323)||(47909697-47909803)
chr7 (218-309)||(20505229-20505320)
chr7 (218-324)||(3247377-3247482)
chr7 (218-326)||(36903472-36903578)
chr7 (218-306)||(41243647-41243735)
chr7 (218-325)||(41243845-41243955)
chr7 (218-304)||(9500124-9500213)
chr7 (235-326)||(15029081-15029174)
chr7 (209-320)||(21505609-21505721)
chr7 (235-326)||(28350345-28350436)
chr7 (218-305)||(48059168-48059257)
chr7 (233-323)||(3382025-3382116)
chr7 (213-326)||(35250321-35250432)
chr7 (218-326)||(44312748-44312857)
chr7 (237-326)||(3381885-3381975)
chr7 (206-324)||(18504444-18504562)
chr7 (219-323)||(21505821-21505927)
chr7 (218-261)||(21748082-21748125)
chr7 (218-326)||(21939275-21939385)
chr7 (218-322)||(23826224-23826333)
chr7 (272-326)||(28472580-28472633)
chr7 (218-309)||(45718089-45718182)
chr7 (208-306)||(29834372-29834472)
chr7 (237-322)||(13889475-13889562)
chr7 (212-306)||(15347951-15348043)
chr7 (218-306)||(20184919-20185010)
chr7 (265-325)||(40872218-40872278)
chr7 (234-306)||(42256602-42256677)
chr7 (215-304)||(46265865-46265955)
chr7 (213-326)||(48058859-48058974)
chr7 (218-326)||(6726261-6726369)
chr7 (265-324)||(18504295-18504354)
chr7 (235-319)||(24432978-24433063)
chr7 (218-322)||(35250122-35250227)
chr7 (213-267)||(9477131-9477185)
chr7 (214-326)||(15106991-15107105)
chr7 (216-322)||(18186656-18186765)
chr7 (218-264)||(35793378-35793424)
chr7 (209-326)||(46199047-46199166)
[»] chr4 (70 HSPs)
chr4 (218-326)||(2653956-2654067)
chr4 (209-326)||(35393870-35393989)
chr4 (218-326)||(50769564-50769672)
chr4 (209-326)||(16292469-16292587)
chr4 (218-326)||(21957668-21957778)
chr4 (218-324)||(1420538-1420645)
chr4 (218-325)||(11824398-11824509)
chr4 (216-326)||(14449274-14449386)
chr4 (218-326)||(6614850-6614958)
chr4 (212-322)||(29697727-29697838)
chr4 (209-305)||(52865374-52865472)
chr4 (216-322)||(8965523-8965629)
chr4 (213-326)||(23759559-23759673)
chr4 (218-326)||(27978900-27979007)
chr4 (218-326)||(4796039-4796148)
chr4 (219-326)||(14060760-14060867)
chr4 (218-326)||(49185760-49185869)
chr4 (218-326)||(53924750-53924859)
chr4 (211-323)||(3658129-3658242)
chr4 (212-326)||(2016788-2016904)
chr4 (218-326)||(2181326-2181435)
chr4 (214-322)||(51362744-51362855)
chr4 (218-323)||(6207179-6207286)
chr4 (215-304)||(37831592-37831683)
chr4 (218-326)||(53312289-53312400)
chr4 (217-324)||(21322709-21322818)
chr4 (213-326)||(51362534-51362652)
chr4 (218-325)||(10059899-10060010)
chr4 (213-326)||(35383763-35383874)
chr4 (265-326)||(54855509-54855570)
chr4 (218-306)||(1420765-1420855)
chr4 (226-325)||(2837102-2837204)
chr4 (213-324)||(12719648-12719762)
chr4 (218-306)||(25909490-25909580)
chr4 (272-322)||(10059742-10059792)
chr4 (235-322)||(8965721-8965805)
chr4 (237-326)||(1571609-1571698)
chr4 (218-326)||(14449485-14449596)
chr4 (218-326)||(21871588-21871695)
chr4 (218-326)||(21927449-21927556)
chr4 (234-306)||(2836918-2836992)
chr4 (213-264)||(4411491-4411542)
chr4 (218-326)||(44356599-44356707)
chr4 (265-323)||(21597453-21597511)
chr4 (213-267)||(43074614-43074668)
chr4 (218-326)||(51233678-51233785)
chr4 (213-326)||(51371665-51371779)
chr4 (224-326)||(6637075-6637178)
chr4 (236-326)||(14060904-14060996)
chr4 (265-326)||(20737435-20737496)
chr4 (218-299)||(49185574-49185656)
chr4 (213-326)||(53312488-53312601)
chr4 (213-326)||(20112138-20112253)
chr4 (215-326)||(50769363-50769476)
chr4 (218-326)||(52462989-52463098)
chr4 (218-261)||(54983851-54983894)
chr4 (208-326)||(2016989-2017109)
chr4 (292-326)||(18937319-18937353)
chr4 (212-322)||(29697521-29697631)
chr4 (272-326)||(42526023-42526077)
chr4 (269-306)||(6207395-6207432)
chr4 (215-325)||(6637265-6637376)
chr4 (213-301)||(11983460-11983549)
chr4 (213-289)||(19909171-19909248)
chr4 (272-321)||(47999715-47999764)
chr4 (218-326)||(4796241-4796349)
chr4 (293-325)||(21871459-21871491)
chr4 (293-325)||(21927320-21927352)
chr4 (209-306)||(35615308-35615407)
chr4 (237-326)||(47999551-47999642)
[»] chr3 (65 HSPs)
chr3 (213-326)||(28712663-28712777)
chr3 (221-326)||(1814556-1814661)
chr3 (218-326)||(27178143-27178252)
chr3 (214-326)||(4474271-4474382)
chr3 (213-326)||(17773168-17773282)
chr3 (213-326)||(19074469-19074583)
chr3 (209-326)||(38958046-38958163)
chr3 (209-326)||(51315685-51315804)
chr3 (218-326)||(14856549-14856659)
chr3 (215-326)||(44585987-44586100)
chr3 (212-326)||(43747276-43747391)
chr3 (218-326)||(15978893-15979001)
chr3 (218-326)||(19404401-19404509)
chr3 (218-326)||(28944167-28944276)
chr3 (218-325)||(47189601-47189708)
chr3 (218-326)||(14349313-14349419)
chr3 (265-326)||(44436440-44436501)
chr3 (211-324)||(14340729-14340844)
chr3 (218-326)||(3192983-3193092)
chr3 (218-326)||(25154382-25154492)
chr3 (213-326)||(54464364-54464479)
chr3 (218-322)||(86768-86875)
chr3 (211-287)||(20432186-20432264)
chr3 (218-326)||(53184719-53184828)
chr3 (214-326)||(578614-578726)
chr3 (212-326)||(25902554-25902670)
chr3 (235-324)||(44433074-44433166)
chr3 (265-326)||(44436599-44436660)
chr3 (218-322)||(28204483-28204586)
chr3 (218-326)||(46226891-46226998)
chr3 (218-262)||(48348258-48348302)
chr3 (213-326)||(54718992-54719103)
chr3 (218-326)||(35359185-35359295)
chr3 (218-326)||(44433265-44433377)
chr3 (213-326)||(38957843-38957959)
chr3 (265-326)||(44585839-44585900)
chr3 (281-326)||(51315562-51315607)
chr3 (221-321)||(52008454-52008554)
chr3 (215-267)||(25843599-25843651)
chr3 (218-262)||(33329614-33329658)
chr3 (232-326)||(578431-578525)
chr3 (218-306)||(1814775-1814864)
chr3 (267-326)||(8024828-8024887)
chr3 (213-324)||(12759501-12759618)
chr3 (218-306)||(27178368-27178458)
chr3 (265-324)||(44624833-44624892)
chr3 (216-326)||(25248888-25248998)
chr3 (234-306)||(54719218-54719290)
chr3 (214-306)||(25154179-25154273)
chr3 (265-320)||(28712507-28712561)
chr3 (218-306)||(50802662-50802751)
chr3 (218-306)||(50873126-50873215)
chr3 (292-326)||(36566952-36566986)
chr3 (217-276)||(43586571-43586631)
chr3 (272-326)||(43747481-43747535)
chr3 (218-306)||(54464165-54464255)
chr3 (265-326)||(3916481-3916542)
chr3 (265-326)||(28944080-28944141)
chr3 (233-303)||(29512565-29512637)
chr3 (218-304)||(36677527-36677614)
chr3 (218-304)||(36687609-36687696)
chr3 (218-324)||(49787253-49787361)
chr3 (214-326)||(86574-86686)
chr3 (266-326)||(46226750-46226810)
chr3 (217-306)||(48348479-48348570)
[»] chr1 (51 HSPs)
chr1 (213-326)||(39642198-39642313)
chr1 (218-326)||(23891663-23891772)
chr1 (209-325)||(25085393-25085510)
chr1 (213-326)||(3377499-3377614)
chr1 (213-322)||(46573032-46573143)
chr1 (221-322)||(23220767-23220869)
chr1 (218-325)||(3377714-3377822)
chr1 (213-326)||(1096650-1096766)
chr1 (214-319)||(50401580-50401686)
chr1 (211-326)||(17760891-17761009)
chr1 (214-326)||(41997639-41997752)
chr1 (216-304)||(16874509-16874599)
chr1 (211-326)||(50226388-50226505)
chr1 (218-326)||(12960849-12960958)
chr1 (215-326)||(46880738-46880850)
chr1 (218-322)||(14979006-14979111)
chr1 (213-321)||(16545766-16545878)
chr1 (213-326)||(46912188-46912302)
chr1 (207-321)||(49425987-49426103)
chr1 (218-262)||(18632606-18632650)
chr1 (267-326)||(15659034-15659093)
chr1 (218-326)||(25486413-25486523)
chr1 (215-326)||(45739137-45739247)
chr1 (218-326)||(14978800-14978909)
chr1 (213-324)||(17760680-17760795)
chr1 (265-325)||(32295003-32295064)
chr1 (209-326)||(7060621-7060741)
chr1 (207-324)||(48319609-48319727)
chr1 (218-326)||(6320782-6320891)
chr1 (218-322)||(18216689-18216794)
chr1 (213-306)||(7579661-7579757)
chr1 (216-326)||(6569528-6569639)
chr1 (234-324)||(7579866-7579957)
chr1 (234-324)||(14190745-14190837)
chr1 (265-326)||(39642409-39642469)
chr1 (209-262)||(51251392-51251444)
chr1 (215-306)||(8009729-8009821)
chr1 (270-326)||(50226592-50226648)
chr1 (237-306)||(50401393-50401464)
chr1 (215-304)||(52321253-52321344)
chr1 (235-326)||(3612124-3612217)
chr1 (216-323)||(12961049-12961157)
chr1 (218-323)||(16874707-16874814)
chr1 (272-326)||(17692887-17692941)
chr1 (273-326)||(14190607-14190660)
chr1 (265-326)||(45738988-45739048)
chr1 (265-306)||(46572878-46572919)
chr1 (233-326)||(49426193-49426286)
chr1 (218-326)||(1096470-1096580)
chr1 (209-306)||(8009937-8010035)
chr1 (218-303)||(32295177-32295264)
[»] scaffold0809 (1 HSPs)
scaffold0809 (209-323)||(2746-2862)
[»] scaffold0417 (1 HSPs)
scaffold0417 (214-326)||(9537-9652)
[»] scaffold0248 (2 HSPs)
scaffold0248 (221-319)||(617-718)
scaffold0248 (218-326)||(405-516)
[»] scaffold0025 (1 HSPs)
scaffold0025 (218-324)||(19043-19150)
[»] scaffold0015 (1 HSPs)
scaffold0015 (265-325)||(77063-77123)
[»] scaffold0067 (1 HSPs)
scaffold0067 (278-321)||(4220-4263)
[»] scaffold0137 (1 HSPs)
scaffold0137 (218-326)||(19917-20026)
[»] scaffold1458 (1 HSPs)
scaffold1458 (218-287)||(1474-1545)
[»] scaffold0515 (1 HSPs)
scaffold0515 (218-287)||(3642-3713)
[»] scaffold0328 (2 HSPs)
scaffold0328 (217-306)||(9414-9504)
scaffold0328 (236-314)||(9634-9711)
[»] scaffold0306 (1 HSPs)
scaffold0306 (218-287)||(3642-3713)
[»] scaffold0041 (1 HSPs)
scaffold0041 (265-325)||(94004-94064)
[»] scaffold1088 (1 HSPs)
scaffold1088 (209-268)||(2013-2072)
[»] scaffold0011 (1 HSPs)
scaffold0011 (235-326)||(145373-145466)
[»] scaffold0194 (1 HSPs)
scaffold0194 (217-262)||(24895-24940)
[»] scaffold0150 (1 HSPs)
scaffold0150 (211-326)||(9551-9663)
[»] scaffold0016 (2 HSPs)
scaffold0016 (272-325)||(203247-203300)
scaffold0016 (235-306)||(203397-203468)
[»] scaffold0166 (1 HSPs)
scaffold0166 (218-323)||(21861-21968)


Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 326
Target Start/End: Complemental strand, 20512722 - 20512400
Alignment:
Q  8 tagagcagcagttagatactggtctcaagaacatacgtacccgcaaagtacacattcttaattacactcttttcaatttacatatgagcatctttgaatt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20512722 tagagcagcagttagatactggtctcaagaacatacgtacccgcaaagtacacattctcaattacactcttttcagtttacatatgagcatctttgaatt 20512623  T
Q  108 tccaacaccccattgtatata--gatggagagatatatgtgtatacatatgagcatctataccaatgaaattaaatttaattatttttacttgtggatct 205  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20512622 tccaacaccccattgtatatatagatggagagatatatgtgtatacatatgagcatctataccaatgaaattaaatttaattatttttacttgtggatct 20512523  T
Q  206 aaattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaag-aaaaagaactacaaaaccaccccctaagtttt 303  Q
    ||||||||||| ||||||||||||| |||| | ||||||| |||||||||||||||| | ||||||| ||||| || ||||||| | ||| |||||||||    
T  20512522 aaattttaaggcttaatagcagttttcgcctcttaactttcacgaagttgcgattttggcccctaagaaaaaaaaattacaaaatcgccctctaagtttt 20512423  T
Q  304 gcaactttagcagttttggcccc 326  Q
    |||||||||||||||||||||||    
T  20512422 gcaactttagcagttttggcccc 20512400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 32391722 - 32391831
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| |||||| ||||||| ||||||||| |||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  32391722 ttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccttaagaaaaa-aactacaaaatcaccccctaagttttgcaactgtagca 32391820  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  32391821 gttttggcccc 32391831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 36798494 - 36798377
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||| |||||||||||||  |||||||||||||  | ||||||||||||| |  |||||||||||| |||| ||||||| ||||||||||||||||||    
T  36798494 ttaaggcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaaaaaaaactgcaaaaccgccccctaagttttgcaac 36798395  T
Q  309 tttagcagttttggcccc 326  Q
    | ||||||||||||||||    
T  36798394 tgtagcagttttggcccc 36798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 213 - 320
Target Start/End: Original strand, 43098026 - 43098135
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||| || ||| ||||||||||||     
T  43098026 aaggtttaatagcagttttcgtcccctaacttttacgaagttgcgattttgatcccgtaagaaaaaaaactacaaaaccgcctccttagttttgcaactg 43098125  T
Q  311 tagcagtttt 320  Q
    ||||||||||    
T  43098126 tagcagtttt 43098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 6130251 - 6130367
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    |||||| ||||||||| ||| ||| ||||||| || |||||||||| || || |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  6130251 ttaaggcttaatagcaattttcgctccctaacattcacgaagttgcaatgttggcccataagaaaaaaaactacaaaaccatcccctaagttttgcaact 6130350  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  6130351 gtagcagttttggcccc 6130367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 35166604 - 35166494
Alignment:
Q  218 ttaatagcagtttccgccccc-taacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |  |||||||||||| |||||||||| |||||||||||||||||| || ||||    
T  35166604 ttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaagaaaaa-aactacaaaatcaccccctaagttttgcagctgtagc 35166506  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  35166505 agttttggcccc 35166494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 3333686 - 3333804
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||| |||||||||||||| |||||||||||||| | ||||||||||||||    |||||||||||| ||||||||||||  || ||||||||||||    
T  3333686 ttttaagatttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaagaaaaa-aactacaaaaccgtcctctaagttttgca 3333784  T
Q  307 actttagcagttttggcccc 326  Q
    | | ||||||||||||||||    
T  3333785 aatgtagcagttttggcccc 3333804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 28446318 - 28446205
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||| |||||| || ||||||| ||||||||| ||| |||||| |  ||||||||| || ||||||||||||  |||||||||||||||||| ||    
T  28446318 ggtttaataacagttttcgtcccctaatttttacgaaattgtgattttggtcccctaagaataaaaactacaaaaccgtcccctaagttttgcaactgta 28446219  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  28446218 gcagttttggcccc 28446205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 2974945 - 2974834
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct---aagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||    | |||||| ||||||| |||| |||||||||||||||| || ||||    
T  2974945 ttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccccaaggaaaaaaaactacagaaccgccccctaagttttgcacctgtagc 2974846  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  2974845 agttttggcccc 2974834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 326
Target Start/End: Original strand, 3999079 - 3999198
Alignment:
Q  208 attttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagttttgc 305  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||||||||||    |||||||||||| |||||||||| |  |   ||||||||||    
T  3999079 atttaaaggtttaatagcagttttcgccccctaactttcacgaagttgcgattttgaccccctaagaaaaa-aactacaaaatcgacttataagttttgc 3999177  T
Q  306 aactttagcagttttggcccc 326  Q
    |||| ||||||||||||||||    
T  3999178 aactgtagcagttttggcccc 3999198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 20629735 - 20629846
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgatttta--gccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    ||||||||||||||||| |||||| ||||||| || ||||||||||||||   ||||||| ||||| ||||||||||| ||||||||||||||| ||||     
T  20629735 aggtttaatagcagttttcgccccttaactttcacaaagttgcgattttaaccccctaagaaaaaaaaactacaaaacaaccccctaagttttgaaactg 20629834  T
Q  311 tagcagttttgg 322  Q
    || |||||||||    
T  20629835 taacagttttgg 20629846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 35877590 - 35877498
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||||||||||| | |||||||||||| |||| ||||| ||||| | |||||||||||| |||||||||||| |||||||||||||||||||    
T  35877590 ttaatagcagttttcaccccctaactttcacgaggttgcaattttgacccctaagaaaaaaaactacaaaaccgccccctaagttttgcaact 35877498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 40276016 - 40276131
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||| |||||| || |||||||||||   ||||||||||||||||||||  |||||||| || ||||||| |  ||||||||||||||||||     
T  40276016 aaggcttaatatcagttttcggcccctaactttcgtgaagttgcgattttagccctctaagaaaaaaaattacaaaatcgtcccctaagttttgcaactg 40276115  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  40276116 tagcagttttggcccc 40276131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 12406044 - 12406153
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||  | ||||||||||||| ||||  ||||||| | |||||||||||| ||||||||||||||||||| || ||    
T  12406044 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgccccctaagttttgcaactgta-ca 12406142  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  12406143 gttttggcccc 12406153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 24405813 - 24405698
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||||||| |||||||  | ||||| |||||||||| ||  ||||||||||| |||||||||||  ||| |||||||||||||||     
T  24405813 aaggcttaatagcagtttccgcaccctaacaatcacgaacttgcgattttggcaccctaagaaaaaaaactacaaaactgcccactaagttttgcaactg 24405714  T
Q  311 tagcagttttggcccc 326  Q
    ||| |||||| |||||    
T  24405713 taggagttttagcccc 24405698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 39574242 - 39574349
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||| |  |||||||||||| ||||| |||| ||||||||||||||||||  | | |||    
T  39574242 ttaatagcagttttcgccctctaactttcacgaagttgcgattttggctccctaagaaaaa-aactataaaatcaccccctaagttttgca--tgtggca 39574338  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  39574339 gttttggcccc 39574349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 24405489 - 24405603
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||||||||||||||||  | |||||||||||| | |||||||||||||  |  ||| ||||||| |||||||||||| ||  |||||||||||| ||||    
T  24405489 aggtttaatagcagttttagtcccctaactttttcaaagttgcgattttgactccctgagaaaaaaaactacaaaaccgccaactaagttttgcatcttt 24405588  T
Q  312 agcagttttggcccc 326  Q
     ||||||||||||||    
T  24405589 ggcagttttggcccc 24405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 25911036 - 25910926
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccc----taagttttgcaacttt 311  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||  |||||||||| |||||||||||  |||||    ||| |||||||||| |    
T  25911036 ttaatagcagttttcgccccctaactttcacgaagttgagattttagccctctaagaaaaa-aactacaaaactgccccctaattaaattttgcaactgt 25910938  T
Q  312 agcagttttggc 323  Q
    ||||||||||||    
T  25910937 agcagttttggc 25910926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 27904794 - 27904704
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  |||| ||||||||| | ||||||||||||| ||||  ||||||||| |||||||||||| ||||||||||||||||    
T  27904794 ttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgca 27904704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 16133046 - 16132930
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaa-gaactacaaaaccaccccctaagttttgcaact 309  Q
    |||| |||||||  |||| |||| || |||||| |||||||||||||||||||||  ||||||||| |||||||||||   |||||||| |||||| |||    
T  16133046 aaggcttaatagtggttttcgcctcccaactttcacgaagttgcgattttagccccctaagaaaaaagaactacaaaattgccccctaaattttgccact 16132947  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  16132946 gtagcagttttggcccc 16132930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 19340759 - 19340873
Alignment:
Q  210 tttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    |||||||||||||||||||||  |||||||||||||| | || ||||||||||  |||    |||||  | ||||||| | |||||||||||||||||||    
T  19340759 tttaaggtttaatagcagttttagccccctaacttttccaaaattgcgattttgaccccctaaaaaa--attacaaaatcgccccctaagttttgcaact 19340856  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  19340857 gtagcagttttggcccc 19340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 36798168 - 36798284
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaact 309  Q
    |||| |||||||||||||  | ||| |||||||| | ||||||| ||||| ||||  ||||||||| || ||||||||||||||||||||||||||| ||    
T  36798168 aaggcttaatagcagttttagacccttaacttttccaaagttgcaattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttgcatct 36798267  T
Q  310 ttagcagttttggcccc 326  Q
     | ||||||||||||||    
T  36798268 gtggcagttttggcccc 36798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 37898028 - 37897921
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||| | ||||||||||||| |  |||||||||||| ||||||||||||  |||||||||||||||  | | |||    
T  37898028 ttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaacc-gcccctaagttttgcatatgtggca 37897930  T
Q  316 gttttggcc 324  Q
    |||||||||    
T  37897929 gttttggcc 37897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 19131816 - 19131701
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    ||||||||||||||||||||  | || |||||||||   ||||||||||||| ||||    ||||| |||||||||||| |||||||||||||||| ||     
T  19131816 ttaaggtttaatagcagttttagtcctctaacttttctaaagttgcgatttttgccccctaaaaaaaaactacaaaaccgccccctaagttttgcatctg 19131717  T
Q  311 tagcagttttggcccc 326  Q
    |  |||||||||||||    
T  19131716 tgacagttttggcccc 19131701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 31080480 - 31080589
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||| ||||||  |||| ||||||||| | |||||||||||||  |  ||||| ||||| ||||||||||||||||||||||||||||| || | |||    
T  31080480 ttaatatcagttttagccctctaacttttccaaagttgcgattttgacctcctaa-aaaaaaaactacaaaaccaccccctaagttttgcatctgtggca 31080578  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  31080579 gttttggcccc 31080589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 22300928 - 22300814
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||||| | |||||| |||||| |||||||||| ||  ||| |||||||||||| | ||||||||||||  ||||| |||| ||||| ||||||||||||    
T  22300928 ttttaaagcttaataacagttttcgccccctaatttgcacgtagttgcgattttggtccctaagaaaaa--actacgaaacgacccc-taagttttgcaa 22300832  T
Q  308 ctttagcagttttggccc 325  Q
    || |||||||||||||||    
T  22300831 ctgtagcagttttggccc 22300814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 12406358 - 12406241
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaa-ctacaaaaccaccccctaagttttgcaac 308  Q
    |||||| ||||||||| |||  |||||||||||||| | |||||| |||||| |||| ||||||||| || | |||||||| ||||||||||||| || |    
T  12406358 ttaaggcttaatagcaattttagccccctaactttttcaaagttgagattttggcccctaagaaaaaaaaacaacaaaaccgccccctaagttttacatc 12406259  T
Q  309 tttagcagttttggcccc 326  Q
    | | ||||||||||||||    
T  12406258 tgtggcagttttggcccc 12406241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 30604398 - 30604293
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaaga-actacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||| ||| ||||| |||  | |||||||||||||||||| |||||||||   ||||||||||| |||||||||||||||| || | |||    
T  30604398 ttaatagcagtttcagccacctaattttctcaaagttgcgattttagcccctaagaaaaaattactacaaaaccgccccctaagttttgcacctgtggca 30604299  T
Q  316 gttttg 321  Q
    ||||||    
T  30604298 gttttg 30604293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 32392012 - 32391940
Alignment:
Q  236 ccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||| | ||||||||||||||||||  ||||||||| |||||||||||| |||| |||||||||||    
T  32392012 ccctaactttttcaaagttgcgattttagccccctaagaaaaaaaactacaaaaccgccccttaagttttgca 32391940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 20630056 - 20629965
Alignment:
Q  218 ttaatagcagtttccgcc-ccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  ||| ||||||||||| | |||||| |||||| ||||  ||||||||| |||||||||||| ||||||||||||||||    
T  20630056 ttaatagcagttttagcctccctaacttttccaaagttgtgattttggccccttaagaaaaaaaactacaaaaccgccccctaagttttgca 20629965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 3334012 - 3333902
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| |||||  |||||||||||||| | ||||||||||||| ||||  |||||| || |||||||||||| | || |||||||||||  | | |||    
T  3334012 ttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaaccgctccataagttttgcatatgtggca 3333913  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  3333912 gttttggcccc 3333902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 30603667 - 30603725
Alignment:
Q  268 taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||| || ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  30603667 taagaaaaaaaattacaaaactgccccctaagttttgcaactgtagcagttttggcccc 30603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 25364139 - 25364047
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||||||||||||||| | ||| |||||||| |||||||||| ||||| ||||    ||||  |||||||||||| ||||||||| |||||||    
T  25364139 ggtttaatagcagttttcaccctctaactttcacgaagttgcaattttggccccctaaaaagaaactacaaaaccgccccctaagatttgcaa 25364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 43098335 - 43098228
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||||||  | |||||||||||| | ||||| ||||||| ||||    ||||| |||||||||||| | || ||||||||||| || |||||||    
T  43098335 ttaatagcagttttagtcccctaactttttcaaagttacgatttttgccccctaaaaaaaaactacaaaaccgcgcc-taagttttgcacctgtagcagt 43098237  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  43098236 tttggcccc 43098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 21066600 - 21066541
Alignment:
Q  267 ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||| || ||||||||| | || |||||||||||||| ||||||||||||||||    
T  21066600 ctaagaaaaaaaattacaaaaccgctccttaagttttgcaactgtagcagttttggcccc 21066541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 34319964 - 34320041
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccc 295  Q
    |||||||||||| |||||| |||||||   |||||||||||||| ||||  ||||||||| ||||||||||||||||||    
T  34319964 taatagcagttttcgcccc-taactttcttgaagttgcgattttggccccctaagaaaaaaaactacaaaaccaccccc 34320041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 2974685 - 2974746
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| ||  |||||||| |||||||||||||||| || | ||||||||||||||    
T  2974685 ccctaagaaaaaaaaaaacaaaaccgccccctaagttttgcatctgtggcagttttggcccc 2974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 16132780 - 16132853
Alignment:
Q  250 aagttgcgattttagcc-ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    ||||||||||||| ||| |||||||| | || ||||||||| |||||||||||||||| || | ||||||||||    
T  16132780 aagttgcgattttggccactaagaaataaaattacaaaaccgccccctaagttttgcacctatggcagttttgg 16132853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 9853034 - 9852986
Alignment:
Q  278 aactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||||    
T  9853034 aactactaaaccgccccctaagttttgcaactgtatcagttttggcccc 9852986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 26702707 - 26702652
Alignment:
Q  235 cccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaac 288  Q
    |||||||||||||||||||||||||||| |  || ||||||||| |||||||||||    
T  26702707 cccctaacttttacgaagttgcgattttggctccttaagaaaaaaaactacaaaac 26702652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 26972440 - 26972385
Alignment:
Q  235 cccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaac 288  Q
    |||||||||||||||||||||||||||| |  || ||||||||| |||||||||||    
T  26972440 cccctaacttttacgaagttgcgattttggctccttaagaaaaaaaactacaaaac 26972385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 8284147 - 8284266
Alignment:
Q  207 aattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| || |||||||||| |||   |||| |||||||| | ||||||||||||| |||     ||||| |||||||| |||||| |||||||||||||    
T  8284147 aatttttagatttaatagcaattttaaccccataacttttccaaagttgcgattttggcctcctaaaaaaaaactacaataccacctcctaagttttgca 8284246  T
Q  307 actttagcagttttggcccc 326  Q
     || | ||||||||| ||||    
T  8284247 tctgtggcagttttgccccc 8284266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 31080729 - 31080686
Alignment:
Q  278 aactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  31080729 aactacaaaaccgccctctaagttttgcaactgtagcagttttg 31080686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 39574493 - 39574442
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    ||||| |||||||| |||||||| |||||||||||||| | |||||||||||    
T  39574493 aaaaaaaactacaagaccaccccataagttttgcaactgtggcagttttggc 39574442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 9852839 - 9852896
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    |||||||||||| |||||||||| | |||||||||||||||| || | |||||||||||    
T  9852839 ccctaagaaaaa-aactacaaaatcgccccctaagttttgcatctgtggcagttttggc 9852896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 303
Target Start/End: Original strand, 24134369 - 24134458
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagtttt 303  Q
    ||||||| ||||||| || ||||||| |||| | ||||||| ||||| ||||  ||||||||| || ||||||||  |||||||||||||    
T  24134369 gtttaattgcagttttcgtcccctaattttttcaaagttgcaattttggccccctaagaaaaaaaattacaaaactgccccctaagtttt 24134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 37897785 - 37897830
Alignment:
Q  281 tacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||| ||||||||||||||||| | |||| |||||||||||    
T  37897785 tacaaaaccgccccctaagttttgcaattgtagctgttttggcccc 37897830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 40276346 - 40276250
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgca 306  Q
    |||| |||||||||||||   ||||||||||||  | || ||||||||||| |||  ||||||||| || ||||||||||  |||||||||||||||    
T  40276346 aaggcttaatagcagttttatccccctaactttcccaaatttgcgattttaaccccctaagaaaaaaaaactacaaaaccgtcccctaagttttgca 40276250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 24779585 - 24779478
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| || ||||||||||||| |  ||||||||||| ||||  |||| |||| || |||||||||   || |||||||| ||||| ||  |    
T  24779585 ttaatagcagttttcgtcccctaacttttatgctgttgcgattttggccccttaagtaaaaaaattacaaaaccgttccataagttttacaactgtatta 24779486  T
Q  316 gttttggc 323  Q
    ||||||||    
T  24779485 gttttggc 24779478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 25910788 - 25910836
Alignment:
Q  278 aactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||||||| |||| ||||||| || | ||||||||||||||    
T  25910788 aactacaaaaccaccctctaaattttgcacctgtggcagttttggcccc 25910836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 41487524 - 41487411
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct-aagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||||||||||||||||  |||| ||||||||| | ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||    
T  41487524 aggtttaatagcagttttagccctctaacttttccaaagttgcgattttagcccttaagaaaaaaaactacaaaaccgccccctaagttttgcaactgta 41487425  T
Q  313 gcagttttggcccc 326  Q
    || |||||||||||    
T  41487424 gctgttttggcccc 41487411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 45456963 - 45457077
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||| | |||||| ||||| ||||||||||||||||  |||||||| ||| |     
T  45456963 taaggtttaataacagttttcgccccctaacttttacgaagttgtgattttgatccctaa-aaaaaaaactacaaaaccaccctttaagttttacaattg 45457061  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  45457062 tagcagttttggcccc 45457077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 25144255 - 25144144
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||||| ||| |||| |||||| || |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| | |     
T  25144255 aggtttaatagcaattttcgcctcctaacattcacgaagttgcgattttagcccctaagaaaa--aactacaaaaccaccccctaagttttgcaattgtt 25144158  T
Q  313 gcagttttggcccc 326  Q
    ||| ||||||||||    
T  25144157 gcaattttggcccc 25144144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 41487198 - 41487311
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| ||||||| || ||| ||||||||||||||||  |||  ||||||| | |||||||||||| |||||||||||||||||||     
T  41487198 aaggcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgaccccctaagaaacaaaactacaaaaccgccccctaagttttgcaactg 41487297  T
Q  311 tagcagttttggcc 324  Q
    ||||||||||||||    
T  41487298 tagcagttttggcc 41487311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 17070905 - 17071019
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||| ||||||| |||||||||||||||| |  |||||| ||||| ||| |||||||||  |||||||||||||||||     
T  17070905 aaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaa-aaaaaaaacaacaaaaccattccctaagttttgcaactg 17071003  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  17071004 tagcagttttggcccc 17071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 17577367 - 17577253
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||| ||||||| |||||||||||||||| ||||  ||| ||||| ||| |||||||||  |||||||||||||||||     
T  17577367 aaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaa-aacaacaaaaccattccctaagttttgcaactg 17577269  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  17577268 tagcagttttggcccc 17577253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 27545669 - 27545557
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||| ||||  ||||||||||| | |||||||||||||||| ||||  ||||||||| ||||||||||| | |||||||||||| ||| | ||    
T  27545669 ggtttaatagcggtttttgccccctaactatcacgaagttgcgattttggccccctaagaaaaa-aactacaaaactatcccctaagttttacaattgta 27545571  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  27545570 gcagttttggcccc 27545557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 37263355 - 37263474
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccct---aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||    ||||   |||||||| |||||||||| | | |||||| |||| ||    
T  37263355 taaggtttaatagcagttttcgccccttaacttttacgaagttgcgattttgactccctaagaagaaaaaaaactacaaaatctctccctaaattttaca 37263454  T
Q  307 actttagcagttttggcccc 326  Q
    ||| ||||||||||||||||    
T  37263455 actgtagcagttttggcccc 37263474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 6807176 - 6807284
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| |||||  ||||| |||||||  ||||||||||||||| ||||  ||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  6807176 ttaatagtagtttttgccccataactttctcgaagttgcgattttggccccctaagaaaaa-aactacaaa-ccaccccctaagttttgcaactgtagca 6807273  T
Q  316 gttttggcccc 326  Q
    |||||| ||||    
T  6807274 gttttgacccc 6807284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 20853370 - 20853489
Alignment:
Q  207 aattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| ||| |||||||||||||  |||||||||||||   ||||||||||||||  |||    ||||| |||||||||||||||||||||||||||||    
T  20853370 aatttttaggcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaaaaaaaaactacaaaaccaccccctaagttttgca 20853469  T
Q  307 actttagcagttttggcccc 326  Q
      | | ||||||||||||||    
T  20853470 tatgtggcagttttggcccc 20853489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 3676141 - 3676230
Alignment:
Q  237 cctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||| ||||| |||||||||| | |||||||||||| |||||||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  3676141 cctaactttcacgaatttgcgattttggtccctaagaaaaaaaactacaaaaccgccccc-aagttatgcaactatagcagttttggcccc 3676230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 22192307 - 22192414
Alignment:
Q  220 aatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||| |||||| ||||||| |||||||||||||||| |  |||||||||||| || || |||||| |||| || ||||||||||| |||||||    
T  22192307 aatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaagaaaaa-aattaaaaaaccgccccttatgttttgcaactgtagcagt 22192405  T
Q  318 tttggcccc 326  Q
    |||| ||||    
T  22192406 tttgacccc 22192414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 14880631 - 14880537
Alignment:
Q  232 cgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||||| |||||||||| ||||| ||||  ||||||||| ||| |||||||| || |||||||||||||||| | |||||||||||||    
T  14880631 cgccccctaactttcacgaagttgcaattttggccccctaagaaaaa-aaccacaaaaccgcctcctaagttttgcaactgtcgcagttttggccc 14880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 33298641 - 33298545
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtt 318  Q
    |||||||||| |||| ||||||||| |||||||||||||||| |  |||||||||    |||||||||||| ||||||||||||||||||  ||||||||    
T  33298641 atagcagttttcgcctcctaactttcacgaagttgcgattttggccccctaagaa----aactacaaaaccgccccctaagttttgcaacagtagcagtt 33298546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 9762510 - 9762405
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||| | ||||   ||||| ||||||||||||   ||||||||||||||||| |||||     
T  9762510 ttaatagcaattttcgccacctaacttttacgaagttgcgattttggccccttgaaaaaaaaactacaaaacc-gtccctaagttttgcaactgtagcaa 9762412  T
Q  317 ttttggc 323  Q
    |||||||    
T  9762411 ttttggc 9762405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 26824126 - 26824034
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||| ||||||||||||||||  ||||  |||||||| |||||||||||   ||| |||||||||||||| ||||||||||||||||    
T  26824126 cccctaactttcacgaagttgcgattttgaccctctaagaaaaaaaactacaaaactgtccc-taagttttgcaactatagcagttttggcccc 26824034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 41602922 - 41602833
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgc 305  Q
    |||||||||||||  ||||||||| ||| |  |||||||||||||||||  |||||||||| |||||||||||| |||| ||||||||||    
T  41602922 ttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaagaaaaaaaactacaaaaccgccccttaagttttgc 41602833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 16982632 - 16982712
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaag 299  Q
    |||||||||| | |||||||||||| |||||||||| ||||| |  |||||||||||| |||||||||||| |||||||||    
T  16982632 atagcagttttcaccccctaactttcacgaagttgcaattttggtcccctaagaaaaaaaactacaaaaccgccccctaag 16982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 37813353 - 37813292
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| |||||||||||||||| || | ||||||||||||||    
T  37813353 ccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcagttttggcccc 37813292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 37813160 - 37813247
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaa 298  Q
    |||| ||||||||||||| |||||||||||||| || || || ||||||| |  |||||||||||| |||||||||||| ||||||||    
T  37813160 aaggcttaatagcagttttcgccccctaactttcacaaatttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaa 37813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 25896991 - 25897073
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccct 296  Q
    |||||||||||||||  |||||||||||||| | ||||||||||||| |  |||||| ||||| |||||||||||| ||||||    
T  25896991 gtttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaacaaaaaaaactacaaaaccgccccct 25897073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 30539270 - 30539192
Alignment:
Q  250 aagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||||| |  |||||||||||| ||||||||||||  ||||||||||||||| || | ||||||||||||||    
T  30539270 aagttgcgattttggtcccctaagaaaaaaaactacaaaaccgtcccctaagttttgcatctgtggcagttttggcccc 30539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 39889766 - 39889881
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| ||||||||||||| |||| | ||||||| |||||||||| ||||| ||||  ||||||||  || ||||||| | | || |||||||||||    
T  39889766 tttttaggcttaatagcagttttcgcctcttaactttcacgaagttgcaattttggccccttaagaaaa--aattacaaaatcgctccataagttttgca 39889863  T
Q  307 actttagcagttttggcc 324  Q
    ||| ||||||||||||||    
T  39889864 actgtagcagttttggcc 39889881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 35213029 - 35213141
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||| |||||||| |||| ||||| |||||||| || |||||||||||||  |||    ||||| |||||||||||  |||| |||||||||||||| ||    
T  35213029 aaggcttaatagcggttttcgcccactaactttgacaaagttgcgattttgaccccctaaaaaa-aactacaaaactgccccttaagttttgcaactgta 35213127  T
Q  313 gcagttttggcccc 326  Q
     |||||||||||||    
T  35213128 acagttttggcccc 35213141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 20228234 - 20228338
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||| |||||| || | |||||||||||||||||||||||||| | |||||| |||||   |||||||||  |  |||||||||||||||| || |||    
T  20228234 ttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccctaaaaaaaaatgctacaaaacagcttcctaagttttgcaactgtaacag 20228333  T
Q  317 ttttg 321  Q
    |||||    
T  20228334 ttttg 20228338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 23702126 - 23702234
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccct---aagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||||| |||||| ||||||| || ||||| ||||||| |  ||||   |||||||| ||||||||||||  |||||||||||||||||| ||    
T  23702126 ttaatagcagttttcgccccttaactttcacaaagttacgattttggtcccctaagaagaaaaaaaactacaaaacc-gcccctaagttttgcaactgta 23702224  T
Q  313 gcagttttgg 322  Q
    | ||||||||    
T  23702225 gtagttttgg 23702234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 37939914 - 37940021
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||||||||||  ||| | ||| |||| | ||||||||||||| ||||    ||||| |||||||||||||||||||||||||||||  | | ||    
T  37939914 ggtttaatagcagttttagcctcttaattttttcaaagttgcgattttggccc-cttaaaaaaaactacaaaaccaccccctaagttttgcatatgtggc 37940012  T
Q  315 agttttggc 323  Q
    |||||||||    
T  37940013 agttttggc 37940021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 44101550 - 44101491
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| |||||||||| |||||| ||||||||||| || |||||||||||||||    
T  44101550 ccctaagaaaaa-aactacaaaatcaccccttaagttttgcatctgtagcagttttggccc 44101491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 44269180 - 44269232
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  44269180 aaaaaaaactacaaaatcaccccctaagttttgcaactgtagtagttttggcc 44269232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 45522511 - 45522392
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| |||| ||||||||   |||||||  ||||| |||||||||||||||||||  ||| ||||  || ||||||||| |||||||||| ||||     
T  45522511 tttttaggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagccccctaacaaaataaaatacaaaaccgccccctaagtattgcc 45522412  T
Q  307 actttagcagttttggcccc 326  Q
     |||| ||||||||||||||    
T  45522411 ccttttgcagttttggcccc 45522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 29658018 - 29657904
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||| ||||||||||||||||| ||| |||||||||| |  ||||||||||||| | ||    ||||| ||| |||||||  |||| |||||||||||||    
T  29658018 tttttaggtttaatagcagttttcgctccctaactttcatcaagttgcgatttt-gaccatctaaaaaaaacaacaaaactgccccttaagttttgcaac 29657920  T
Q  309 tttagcagttttggcc 324  Q
    | |||| |||||||||    
T  29657919 tgtagccgttttggcc 29657904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 521758 - 521647
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| | |||||||| ||| ||||||||||||||||||  |||| ||||||| || |||||||||  ||| |||||||||||  |     
T  521758 aaggcttaatagcagttttcaccccctaattttcacgaagttgcgattttagacccctgagaaaaa-aattacaaaacc-gcccataagttttgcacttg 521661  T
Q  311 tagcagttttggcc 324  Q
    ||||| ||||||||    
T  521660 tagcaattttggcc 521647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 30539047 - 30539101
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  30539047 aaaaaaaactacaaaactgccccctaagttttacaactgtagcagttttggcccc 30539101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 32071322 - 32071236
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  ||||| ||||||||   ||||||||||||| | ||||||||||||  ||||||||||| ||||||||||||||||    
T  32071322 ttaatagcagttttagcccc-taacttttctaaagttgcgattttgacccctaagaaaaa--actacaaaaccgccccctaagttttgca 32071236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 22846495 - 22846555
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| |||||||||| |  ||| ||||||||||| |||| |||||||||||||    
T  22846495 ccctaagaaaaaaaactacaaaatcgtcccataagttttgcatctttggcagttttggccc 22846555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 18093389 - 18093280
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||||||| ||||| ||||||| |||||| ||||  ||||||| | ||||||||||  | |||||||||||||  ||| |  ||    
T  18093389 ttaatagcagttttagccccctaaattttaagaagttg-gatttttgccccctaagaaataaaactacaaaattatcccctaagttttgtcactgtgaca 18093291  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  18093290 gttttggcccc 18093280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 21486706 - 21486765
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||||  ||||||||||| |||||||||||||||| || | ||| ||||||||    
T  21486706 ccctaagaaaaaacactacaaaaccgccccctaagttttgcacctgtggcatttttggcc 21486765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 26823829 - 26823919
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||   ||| ||||||||  | ||||| |||||||  |||  ||||||||| |||||||||| ||||||||||||||||||    
T  26823829 ttaatagcagttttaaccctctaactttctcaaagttacgattttgaccccttaagaaaaaaaactacaaaatcaccccctaagttttgca 26823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 326
Target Start/End: Original strand, 29657721 - 29657816
Alignment:
Q  236 ccctaacttttacgaagttgcgattttagccct-----aagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||  | ||||||||||||| |||||     |||||||| |||||||||||| |||||||| |||||||  | | ||||||||||||||    
T  29657721 ccctaactttatcaaagttgcgattttggccctctaagaagaaaaaaaactacaaaaccgccccctaaattttgcatatgtggcagttttggcccc 29657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 44101325 - 44101400
Alignment:
Q  250 aagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||||| | | |||| ||||| ||||| ||||  | ||| |||||||||||||||||||||||||||||    
T  44101325 aagttgcgattttgatctctaaaaaaaaaaactataaaattatcccttaagttttgcaactttagcagttttggcc 44101400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 521527 - 521577
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct 268  Q
    ||||||||||||| || ||||| |||||||||| |||| ||||||||||||    
T  521527 ttaatagcagttttcgtcccctcacttttacgacgttgtgattttagccct 521577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 6807424 - 6807390
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||| |||||||||||||||||||||||||||||    
T  6807424 aaaaaaaactacaaaaccaccccctaagttttgca 6807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 306
Target Start/End: Complemental strand, 23702452 - 23702356
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| |||||||||||||  |||||||||||||    |||||||||||||||  |||||||||||| || |||||||    |||||||||||||||    
T  23702452 ttaaggcttaatagcagttttagccccctaactttccaaaagttgcgattttagccccctaagaaaaa-aattacaaaattgtcccctaagttttgca 23702356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 45177204 - 45177313
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||| ||  ||| |||||||||  | |||||||||||||    |||||||||||| |||||||||| |  ||||||||||||||| || |  ||    
T  45177204 ttaatagcagatttagcctcctaactttctcaaagttgcgattttgatcccctaagaaaaaaaactacaaaatcgtcccctaagttttgcatctgtgaca 45177303  T
Q  316 gttttggccc 325  Q
    ||||||||||    
T  45177304 gttttggccc 45177313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 21486906 - 21486857
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    ||||| |||||||||||  || |||||||||||||||| |||||||||||    
T  21486906 aaaaaaaactacaaaactgcctcctaagttttgcaactgtagcagttttg 21486857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 41602535 - 41602595
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||||||| |||||||||||   | | ||||||||||||||    
T  41602535 ccctaagaaaaa-aactacaaaaccacccgctaagttttgcccatgtggcagttttggcccc 41602595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 9499268 - 9499224
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    |||||||||||||  ||||||||| | ||||||||||||||||||    
T  9499268 ttaatagcagttttggccccctaagtattacgaagttgcgatttt 9499224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 14489521 - 14489413
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||    
T  14489521 ttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccctaagaaaaa-aactacaaaatcaccccctaagttttgcaactgtggcag 14489423  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  14489422 ttttggcccc 14489413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 34761175 - 34761061
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||| | |  |||||||||||||||||||||| || |||||||||||||| | |    
T  34761175 aggtttaatagcagttttcgtcccctaactttcacgaagttgcgattttaactccttaagaaaaagaactacaaaaccgccacctaagttttgcaattgt 34761076  T
Q  312 agcagttttggcccc 326  Q
    |||||||||||||||    
T  34761075 agcagttttggcccc 34761061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 35718974 - 35718857
Alignment:
Q  210 tttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgat-tttagc-cctaagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| || | | ||||||||||| ||||||||||||  ||||||||||||||||    
T  35718974 tttaaggtttaatagcagtttccgcctcctaactttcacgaagttgcgatcttgatctcctaagaaaaa-aactacaaaaccgtcccctaagttttgcaa 35718876  T
Q  308 ctttagcagttttggcccc 326  Q
    || ||||||||||||||||    
T  35718875 ctgtagcagttttggcccc 35718857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 37431855 - 37431739
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||| ||  ||||||||||| |||||||||||| |||| |||||||||||||    
T  37431855 ttaaggtttaatagcagttttcgccccctaacttccacgaagttgcgattttggcctcctaagaaaaa-aactacaaaaccgccccttaagttttgcaac 37431757  T
Q  309 tttagcagttttggcccc 326  Q
    | ||||| ||||||||||    
T  37431756 tgtagcatttttggcccc 37431739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 6510312 - 6510201
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    ||||||||||||||| ||||| |||||||| | |||||||||||||| ||  ||||||||||| | |||||||||| ||||||||||||||||||| |||    
T  6510312 gtttaatagcagttttcgccctctaactttcatgaagttgcgattttggcaccctaagaaaaa-agctacaaaaccgccccctaagttttgcaactgtag 6510214  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  6510213 cagttttggcccc 6510201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 6593035 - 6592935
Alignment:
Q  226 agtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    ||||| |||| ||||||||| |||||||||||||||||||||    ||||| |||||||||||  ||||||||||||||||||| |||||||||||||||    
T  6593035 agttttcgccacctaactttcacgaagttgcgattttagcccccttaaaaaaaactacaaaactgccccctaagttttgcaactgtagcagttttggccc 6592936  T
Q  326 c 326  Q
    |    
T  6592935 c 6592935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 19206145 - 19206253
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||| ||| |||||||||| ||| || ||||||||||||| ||||    ||||| |||||||||||||||||||||||||| ||||| |||||||    
T  19206145 ttaatagcaattttcgccccctaattttcacaaagttgcgattttggccccctaaaaaaaaactacaaaaccaccccctaagttttacaactgtagcagt 19206244  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  19206245 tttggcccc 19206253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 31827842 - 31827734
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |  ||  |||||||||| |  ||||||| ||||||||||||||||||||| |||||    
T  31827842 ttaatagcaattttcgccccctaacttttacgaagttgcgattatgacctcctaagaaaaaaa--tacaaaatcaccccctaagttttgcaactgtagca 31827745  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  31827744 gttttggcccc 31827734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 34679401 - 34679294
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||||||  ||||||||||||| ||||||||| |||||| ||||    ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  34679401 ttaatagcagtttttgccccctaactttcacgaagttgtgattttggccc-cctaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagt 34679303  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  34679302 tttggcccc 34679294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 18709250 - 18709356
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| || ||||||||||| |||||||| ||||||| ||| |   ||||| |||||||||| ||||||||||||||||||||| |||||||    
T  18709250 ttaatagcagttttcgtcccctaactttcacgaagtttcgattttggcc-tcctaaaaaaaactacaaaatcaccccctaagttttgcaactatagcagt 18709348  T
Q  318 tttggccc 325  Q
    ||||||||    
T  18709349 tttggccc 18709356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 43029111 - 43028995
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    ||||||||||||||||||||  ||||  ||||||| || ||||||||||||| ||||  ||||||||| |||||||||||| ||||||||||||| |||     
T  43029111 ttaaggtttaatagcagtttttgccct-taactttcacaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttacaat 43029013  T
Q  309 tttagcagttttggcccc 326  Q
    | ||||||||||||||||    
T  43029012 tgtagcagttttggcccc 43028995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 32969838 - 32969726
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct---aagaaaaagaact-acaaaaccaccccctaagttttgcaactttag 313  Q
    ||||||||||||| |||||||||||||| ||| |||| ||||||||||||    || ||||| |||| |||||||| ||||||||||||||||||  |||    
T  32969838 ttaatagcagttttcgccccctaactttcacggagtttcgattttagccccctgaaaaaaaaaaacttacaaaaccgccccctaagttttgcaacagtag 32969739  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  32969738 cagttttggcccc 32969726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 43028792 - 43028904
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||  |||||||||||| | | ||||||||||||| |  |||||||||||| |||||||||||| |||||||||||||||| ||     
T  43028792 aaggcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaacc-ccccctaagttttgcatctg 43028890  T
Q  311 tagcagttttggcc 324  Q
    | ||||||||||||    
T  43028891 tggcagttttggcc 43028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 36176984 - 36177089
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||||||  |||| |||| ||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||||||||  || | |||||    
T  36176984 ttaatagcagttttagccctctaagtttcacgaagttgcgattttagccc-cctaaaaaaaactacaaaaccaccccctaagttttgcccctatggcagt 36177082  T
Q  318 tttggcc 324  Q
    |||||||    
T  36177083 tttggcc 36177089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 4576544 - 4576656
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||||||||||||  ||| |||||||||| | ||||||  ||||| ||||  ||||||||| |||||||||| |  ||| |||||||||||||| |||    
T  4576544 gtttaatagcagttttagcctcctaactttttcaaagttgtcattttggccccctaagaaaaaaaactacaaaatcgtcccataagttttgcaactgtag 4576643  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  4576644 cagttttggcccc 4576656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 39918704 - 39918643
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  39918704 ccctaagaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcaattttggcccc 39918643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 15023149 - 15023040
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||||||||||| | ||||||| ||||||  |||  ||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  15023149 ttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaagaaaaa-aactacaaaaccgtcccctaagttttgtaactgtagca 15023051  T
Q  316 gttttggcccc 326  Q
     ||||||||||    
T  15023050 attttggcccc 15023040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 5470331 - 5470440
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||||| || ||||| | ||| ||||||||||||||||   |||   ||||| |||||||||||  ||||||||||||||||| | |||||    
T  5470331 gtttaatagcagttttcgtccccttattttcacgaagttgcgatttttatcctctaaaaaa-aactacaaaactgccccctaagttttgcaattgtagca 5470429  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  5470430 gttttggcccc 5470440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 16043336 - 16043223
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaag---aactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||| |  ||||||||| |||   ||||||| |||| ||||||| |||||||| || |     
T  16043336 ttaacagcagttttcgccccctaactttcacgaagttacgattttggccccctaagaagaagaaaaactacagaaccgccccctatgttttgcatctgtg 16043237  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  16043236 gcagttttggcccc 16043223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 19895616 - 19895723
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||| |||||| || ||||||||||||||||| |||||||||| |  ||||||| ||||| ||||| |||| | | || |||||||||||||| ||||    
T  19895616 ttaatatcagttttcgtcccctaacttttacgaaattgcgattttggtcccctaagaaaaaaaaactataaaatcgcaccataagttttgcaactatagc 19895715  T
Q  315 agttttgg 322  Q
    ||||||||    
T  19895716 agttttgg 19895723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 24472755 - 24472650
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||||||||||  |  |||||| |||| | |||||| ||||||||||| ||||||||| ||||||||||||  ||||||||||||||| || | ||||    
T  24472755 ttaatagcagttttagaaccctaatttttccaaagttgtgattttagcccctaagaaaaaaaactacaaaacc--cccctaagttttgcatctgtggcag 24472658  T
Q  317 ttttggcc 324  Q
    ||||||||    
T  24472657 ttttggcc 24472650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 4925737 - 4925648
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||| |||||||||||||||| ||| |   ||||| |||||||||| | |||| |||||||||||||| ||||||||||||||||    
T  4925737 cccctaactttcacgaagttgcgattttggcc-tcctaaaaaaaactacaaaatcgcccc-taagttttgcaactgtagcagttttggcccc 4925648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 21361900 - 21361990
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    |||||||||||  | ||||||||||||| ||||  ||||||||| |||||||||| ||||||||||||||||||  | | |||||||||||    
T  21361900 cccctaactttatcaaagttgcgattttggccccttaagaaaaaaaactacaaaaacaccccctaagttttgcacatgtggcagttttggc 21361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 24306037 - 24306122
Alignment:
Q  237 cctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    ||||||||||||||||||||||||||||  | |||||||||| ||||||||||||  |  ||||||||||||||| || ||||||||    
T  24306037 cctaacttttacgaagttgcgattttagtcctctaagaaaaa-aactacaaaaccgtcttctaagttttgcaactgtaacagttttg 24306122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 34679095 - 34679208
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaacc-accccctaagttttgcaact 309  Q
    |||| |||||||||||||  |||||||||||||| | ||||||||||||| ||  ||||||||||| || |||||||||  ||||||||||||||||  |    
T  34679095 aaggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaa-aattacaaaaccgcccccctaagttttgcacat 34679193  T
Q  310 ttagcagttttggcc 324  Q
     | ||||||||||||    
T  34679194 gtggcagttttggcc 34679208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 44297555 - 44297674
Alignment:
Q  207 aattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| ||| ||||||||| |||  ||| ||||| ||||   ||||||||||||| ||||    ||||| |||||||||||  |||||||||||||| |    
T  44297555 aatttttaggcttaatagcacttttagcctcctaatttttcaaaagttgcgattttggccccctaaaaaaaaactacaaaactgccccctaagttttgta 44297654  T
Q  307 actttagcagttttggcccc 326  Q
    ||| ||||||||||||||||    
T  44297655 actgtagcagttttggcccc 44297674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 14943859 - 14943746
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||| |||||||||||||  ||||| |||||||| | |||||| |||||| | | |||||||||| |||||||||||| ||| |||||||||||| || |    
T  14943859 aaggcttaatagcagttttagccccttaacttttccaaagttgtgattttggtctctaagaaaaa-aactacaaaaccgccctctaagttttgcacctgt 14943761  T
Q  312 agcagttttggcccc 326  Q
     ||| ||||||||||    
T  14943760 ggcatttttggcccc 14943746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 27489729 - 27489637
Alignment:
Q  237 cctaacttttacgaagttgcgattttagcc--ctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||| |||| |||||||||||||||| |||  |||||||||| || |||||||||  | ||||||||||||||||| ||||||||||| ||||    
T  27489729 cctatctttcacgaagttgcgattttggcctcctaagaaaaaaaaactacaaaactgctccctaagttttgcaactgtagcagttttgacccc 27489637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 34100792 - 34100853
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| ||||| ||||||  |||||||||||||||||| ||||||||||| ||||    
T  34100792 ccctaagaaaaaaaactataaaaccgtcccctaagttttgcaactgtagcagttttgacccc 34100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 37803443 - 37803337
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaag--aaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||| || ||| |||||||||||||||||||||||||||||||  |  ||||||  ||||| |||||| |||||  ||| |||||||||||||| |||    
T  37803443 ttaataacaattttcgccccctaacttttacgaagttgcgattttgacctcctaagaaaaaaaaaactacgaaacc-gcccataagttttgcaactgtag 37803345  T
Q  314 cagttttg 321  Q
    ||||||||    
T  37803344 cagttttg 37803337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 18225033 - 18224934
Alignment:
Q  226 agtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca-gttttggc 323  Q
    ||||| ||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||| | || | |||||||||||| | ||||| ||||||||    
T  18225033 agttttcgccccc-aacttttacgaagttgcgattttgacccctaagaaaa--aactacaaaatcgcctcttaagttttgcaattgtagcaggttttggc 18224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 25333518 - 25333607
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    |||| |||||||| | ||||||||||||| | ||  ||||||||| ||||| ||||||||||||||||||||||| || | ||||||||||    
T  25333518 ccccttaacttttccaaagttgcgattttggtcccttaagaaaaa-aactataaaaccaccccctaagttttgcacctgtggcagttttgg 25333607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 5362178 - 5362251
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaacc 289  Q
    ||||||| | ||| |||||||||||||| || ||||||||||||| ||||  ||||||||| ||||||||||||    
T  5362178 ttaatagtaattttcgccccctaactttcacaaagttgcgattttggccccataagaaaaaaaactacaaaacc 5362251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 36195649 - 36195702
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  36195649 aaaaaaaactacaaaaccgccccctaag-tttgcaactgtagcagttttggcccc 36195702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 5470643 - 5470538
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtttt 320  Q
    ||||||||||  |||||||||||||    ||||||||||||| ||||    ||||| |||||||||||| |||| |||||||| || || | ||||||||    
T  5470643 atagcagttttagccccctaactttcctaaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccttaagttttacatctgtggcagtttt 5470544  T
Q  321 ggcccc 326  Q
    ||||||    
T  5470543 ggcccc 5470538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 14943554 - 14943643
Alignment:
Q  233 gccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccac-cccctaagttttgcaactttagcagttttg 321  Q
    ||||||||||||| ||||||||| ||||||    |||||||||||  |||||||||||| | |||||||||||||||||| ||||| |||||    
T  14943554 gccccctaactttcacgaagttgtgattttgacaccctaagaaaa--aactacaaaaccgcacccctaagttttgcaactgtagcaattttg 14943643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 44618053 - 44617940
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||   ||| |||||||| | |||||||||||||| | ||  |||||||||  | ||||||||| ||||||||||||||||  |     
T  44618053 aaggcttaatagcagttttaaccctctaactttcaagaagttgcgattttggtcccttaagaaaaa--attacaaaaccgccccctaagttttgcatttg 44617956  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  44617955 tggcagttttggcccc 44617940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 12948888 - 12948936
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    |||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  12948888 aggtttaatagcagttttagccccctaaattttaagaagttgcgatttt 12948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 34760881 - 34760960
Alignment:
Q  250 aagttgcgattttag-ccctaagaaaaagaa--ctacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||||| | |||||||||||| ||  |||||||||| ||||||||||||||||  | | ||||||||||||||    
T  34760881 aagttgcgattttggtccctaagaaaaaaaaaactacaaaaccgccccctaagttttgcatatgtggcagttttggcccc 34760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 2609080 - 2609143
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaa 279  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||| ||| ||||||| |||||    
T  2609080 tttaatagtagttttcgccccctaacttttacgaagttttgattttggcctctaagaagaagaa 2609143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 14489212 - 14489321
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||  |||| ||||||||    |||||| |||||| ||||  ||||||||| || ||||||||| |||||||||||||||| ||     
T  14489212 aaggcttaatagcagttttagccctctaactttccaaaagttgtgattttggccccttaagaaaaa-aattacaaaaccgccccctaagttttgcacctg 14489310  T
Q  311 tagcagttttg 321  Q
    | |||||||||    
T  14489311 tggcagttttg 14489321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 15022841 - 15022950
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||||||||||||   |||||| |||||| ||  || |||||||| ||||||||||||  ||||||| |||||||  | | |||    
T  15022841 ttaatagcagttttagccccctaacttttcgaaagttgtgattttggcatccgaagaaaaaaaactacaaaacc-gcccctaaattttgcatttgtggca 15022939  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  15022940 gttttggcccc 15022950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 27489469 - 27489543
Alignment:
Q  250 aagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||||| | |||||||||||| ||||||||||  ||||||||| ||||||| || | ||||||||||||    
T  27489469 aagttgcgatttttgcccctaagaaaaa-aactacaaaattaccccctaacttttgcatctgtggcagttttggcc 27489543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 31827528 - 31827638
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||   | ||||||||||| | |||||| ||||||  |||  |||||||||  ||||||||| ||||||||||| |||||| || |  ||    
T  31827528 ttaatagcagttttaactccctaacttttccaaagttgtgattttgcccccctaagaaaaaagactacaaaatcaccccctaagctttgcatctgtgcca 31827627  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  31827628 gttttggcccc 31827638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 39918437 - 39918547
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| |||||  |||||||||||||  | ||||||||||||| ||||  ||||||||| |||| ||||| | ||| ||||||||||||  | | ||     
T  39918437 ttaatagtagttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaaaaactgcaaaatcgcccgctaagttttgcatatgtggct 39918536  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  39918537 gttttggcccc 39918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 25377 - 25498
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-----ctacaaaaccaccccctaagttttg 304  Q
    ||||| |||||| ||||||  |||||||||||||  | ||||| ||||||| ||||  |||||| |||||     |||||||||| ||||||||||||||    
T  25377 taaggcttaataacagtttttgccccctaactttcccaaagttacgattttggccccctaagaagaagaaaaaaactacaaaaccgccccctaagttttg 25476  T
Q  305 caactttagcagttttggcccc 326  Q
    || || | ||||||||| ||||    
T  25477 cacctgtggcagttttgacccc 25498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 24472451 - 24472556
Alignment:
Q  220 aatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||| ||  |||||| ||||||||| |||| ||||| |||   ||||||||| |||| |||||    ||||||||||||| |||| |||||||    
T  24472451 aatagcagttttcgtaccctaatttttacgaatttgcaattttggcctcttaagaaaaaaaactgcaaaaatgtcccctaagttttgtaactgtagcagt 24472550  T
Q  318 tttggc 323  Q
    ||||||    
T  24472551 tttggc 24472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 6592727 - 6592771
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    |||||||||||||  |||||||||||||| | |||||||||||||    
T  6592727 ttaatagcagttttagccccctaacttttccaaagttgcgatttt 6592771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 46082 - 46189
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtt 318  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||  ||||||||  |||||||||||| ||||||||||||||||||| ||||||||    
T  46082 atagcagttttcgccccctaactttcacgaagttgcgattttaaccccctaagaaaagaaactacaaaaccgccccctaagttttgcaactgtagcagtt 46181  T
Q  319 ttggcccc 326  Q
    ||||||||    
T  46182 ttggcccc 46189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 28011435 - 28011327
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||  |||||||| ||| |||||||||||| |||| |||||||||||||| |||||||    
T  28011435 ttaatagcagttttcaccccctaactttcacgaagttgcgattttgtccctaagagaaaaaactacaaaaccgccccttaagttttgcaactgtagcagt 28011336  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  28011335 tttggcccc 28011327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 12766533 - 12766416
Alignment:
Q  210 tttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    ||||||| ||||||||||||| | |||||||||||| |||||||||||||||| ||||  ||| ||||| |||||||||||| |||| ||||||||||||    
T  12766533 tttaaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaaaaaaaa-aactacaaaaccgccccttaagttttgcaa 12766435  T
Q  308 ctttagcagttttggcccc 326  Q
    || ||||||||||||||||    
T  12766434 ctgtagcagttttggcccc 12766416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 3579598 - 3579707
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| || ||| ||||||| |||||||||||||||| ||||  ||| ||||| |||||||||||| ||||||||||||||||||| |||||    
T  3579598 ttaatagcagttttcgtcccttaactttcacgaagttgcgattttggccccgtaaaaaaaa-aactacaaaaccgccccctaagttttgcaactgtagca 3579696  T
Q  316 gttttggcccc 326  Q
     ||||||||||    
T  3579697 cttttggcccc 3579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 1377522 - 1377409
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||| |||||| || ||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||    ||||||||||||||||| |    
T  1377522 aaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaagaaaaa-aactacaaaactgttccctaagttttgcaactgt 1377424  T
Q  312 agcagttttggcccc 326  Q
    | |||||||||||||    
T  1377423 aacagttttggcccc 1377409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 1385270 - 1385157
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||| |||||| || ||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||    ||||||||||||||||| |    
T  1385270 aaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaagaaaaa-aactacaaaactgttccctaagttttgcaactgt 1385172  T
Q  312 agcagttttggcccc 326  Q
    | |||||||||||||    
T  1385171 aacagttttggcccc 1385157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 10727504 - 10727395
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||  |||||||||||||| | |||||| |||||| ||||  ||||||||| |||||||||||| |||||||||||||||| || | ||||    
T  10727504 taatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcag 10727405  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  10727404 ttttggcccc 10727395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 10727184 - 10727303
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| ||||||||||||| |||| |||||||||  |||||||| |||||| | |  |||||||||| |||||||||||  ||| ||||||||||||    
T  10727184 tttttaggcttaatagcagttttcgcctcctaactttagcgaagttgtgattttggactcctaagaaaaaaaactacaaaactgccctctaagttttgca 10727283  T
Q  307 actttagcagttttggcccc 326  Q
    ||| ||||||||||||||||    
T  10727284 actgtagcagttttggcccc 10727303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 33401364 - 33401256
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||| || |    ||||| |||||||||||   |||||||||||||||||| |||||||    
T  33401364 ttaatagcagttttcaccccctaacttttacgaagttacgattttggctccctaaaaaaaaactacaaaactgtcccctaagttttgcaactgtagcagt 33401265  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  33401264 tttggcccc 33401256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 326
Target Start/End: Original strand, 238923 - 239040
Alignment:
Q  208 attttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    ||||| ||| ||||||||||||| |||||||||| ||| |||||||||||||||| | |||   ||||| |||||||||| |  ||||||||||||||||    
T  238923 atttttaggcttaatagcagttttcgccccctaattttcacgaagttgcgatttt-gacctcctaaaaaaaactacaaaatcgtcccctaagttttgcaa 239021  T
Q  308 ctttagcagttttggcccc 326  Q
    |  ||||||||||||||||    
T  239022 ccgtagcagttttggcccc 239040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 2840792 - 2840902
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||| | | ||||||||| ||||||||||||| |  |||||| ||||| || |||||||||  |||||||||||||||| | |||||    
T  2840792 ttaatagcagttttcgctctccaacttttacaaagttgcgattttggtcccctaaaaaaaaaaaatacaaaaccgtcccctaagttttgcaattgtagca 2840891  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  2840892 gttttggcccc 2840902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 322
Target Start/End: Original strand, 2853435 - 2853536
Alignment:
Q  222 tagcagtttccgccccc-taacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtt 318  Q
    ||||||||| | ||||| ||||||| |||||||||||||||| ||||  |||||||||  |||||||||||  |||||||||||||||||| ||||||||    
T  2853435 tagcagttttcacccccataactttcacgaagttgcgattttcgccccctaagaaaaa--actacaaaaccgtcccctaagttttgcaactgtagcagtt 2853532  T
Q  319 ttgg 322  Q
    ||||    
T  2853533 ttgg 2853536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 26601769 - 26601666
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||  ||| ||||||||| |||||||||||||||  ||||  ||||||||| ||||| |||||| |||||||| |||||||||| ||||||    
T  26601769 taatagcagtttttgcctcctaactttcacgaagttgcgatttctgccccttaagaaaaa-aactataaaaccgccccctaaattttgcaactgtagcag 26601671  T
Q  317 ttttg 321  Q
    |||||    
T  26601670 ttttg 26601666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 32143555 - 32143452
Alignment:
Q  225 cagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    |||||| | |||||||||||||| ||||||||||||||  ||||  |||||||| ||||||||||   ||| ||||||||||||||| |||||||| |||    
T  32143555 cagttttcaccccctaacttttatgaagttgcgattttgaccctctaagaaaaataactacaaaattgccctctaagttttgcaactgtagcagttctgg 32143456  T
Q  323 cccc 326  Q
    ||||    
T  32143455 cccc 32143452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 20475014 - 20474906
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgatttt-agccct-aagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||||| |||  |||||||||||||| | ||||||||||||| | |||| |||||||| |||||||||||  |||||||||||||||| || | ||||    
T  20475014 taatagcaattttagccccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaacg-ccccctaagttttgcatctgtggcag 20474916  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  20474915 ttttggcccc 20474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 17248952 - 17248843
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taag-aaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||||||  |||||| ||||||||| |||||||||||||| ||||  |||| ||||| ||||||||||||  |||| ||||||||||| | ||||    
T  17248952 ttaatagcagttgtcgcccc-taacttttaggaagttgcgattttggccccataagaaaaaaaaactacaaaaccgtcccc-aagttttgcaattgtagc 17248855  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  17248854 agttttggcccc 17248843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 266125 - 266234
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||||||||||  |||||| ||||||  | ||| ||| ||||| |||| ||||||||| ||||||||||   |||| |||||||||||||| ||||||    
T  266125 ttaatagcagttttagcccccaaactttcccaaagctgcaattttggcccctaagaaaaataactacaaaattgccccttaagttttgcaactgtagcag 266224  T
Q  317 ttttggcccc 326  Q
    ||||| ||||    
T  266225 ttttgacccc 266234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 5003092 - 5003178
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||  |  ||||||||||| ||||| ||||||| |||||||||||||    
T  5003092 ttaataacagttttcgccccctaacttttaagaagttgcgattttgacttcctaagaaaaa-aactataaaacca-cccctaagttttg 5003178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 323
Target Start/End: Original strand, 18030944 - 18031043
Alignment:
Q  222 tagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    ||||||||| | |||||||||||| |||||||||||||||| | |||   ||||| |||||||||| |  |||||||||||||||||| ||||| |||||    
T  18030944 tagcagttttctccccctaactttcacgaagttgcgatttt-ggcctcctaaaaaaaactacaaaatc-gcccctaagttttgcaactgtagcaattttg 18031041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 26601496 - 26601553
Alignment:
Q  250 aagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||    
T  26601496 aagttgcgattttggcccctaagaaaaaaaattacaaaaccaccccctaagttttgca 26601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 18604125 - 18604216
Alignment:
Q  236 ccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||| ||||| |||||||||||||| ||| |  |||||||| |||||||||||| ||||| |||||||||  || | |||||||||||||    
T  18604125 ccctaagttttaagaagttgcgattttcgccttttaagaaaaaaaactacaaaaccgcccccaaagttttgcccctgtggcagttttggccc 18604216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 30349346 - 30349441
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-ag-ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||| |||||||||||||  |||| ||||||||  | ||||||||||||| || |||||||||||| |||||||||||| |||| |||||||||||    
T  30349346 taaggcttaatagcagttttagccctctaactttcccaaagttgcgattttgagcccctaagaaaaa-aactacaaaaccgccccttaagttttgca 30349441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 6036647 - 6036757
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||||| | |||||  ||||||||||||||||  |||  ||||||||| |  |||||||| | |||||||||||||||  | | |||    
T  6036647 ttaatagcagttttcgcccgcaaacttccacgaagttgcgattttgaccccctaagaaaaaaagttacaaaactatcccctaagttttgcatatgtggca 6036746  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  6036747 gttttggcccc 6036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 11351937 - 11351845
Alignment:
Q  233 gccccctaacttttacgaagttgcgattttagc-cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||||||| ||||||||||||||||| |||   ||||| | ||||||||||| |   ||| |||||||||| ||||||||||||||||    
T  11351937 gccccctaacttttatgaagttgcgattttagctcct--taaaaaaatctacaaaaccatcatttaaattttgcaactgtagcagttttggcccc 11351845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 2853677 - 2853616
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| ||||||||||||| ||  | | ||||||||||||||    
T  2853677 ccctaagaaaaaaaactacaaaaccgccccctaagtttttcatatgtggcagttttggcccc 2853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 30349667 - 30349563
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||||||  | |||||||||||| | ||||||||||||| |  ||||||| ||||| |||||||||| |  | | |||||||||||||| ||||    
T  30349667 ttaatagcagtttttgtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaaactacaaaatcgtctcataagttttgcaactgtagc 30349568  T
Q  315 agttt 319  Q
    |||||    
T  30349567 agttt 30349563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 5003358 - 5003283
Alignment:
Q  250 aagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    ||||||||||||||||  ||||||||||| ||| ||||||   ||||||||||||||||| | | |||||||||||    
T  5003358 aagttgcgattttagcttcctaagaaaaaaaacaacaaaattgccccctaagttttgcaattgtggcagttttggc 5003283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 32143257 - 32143371
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agcccta--agaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||||||||||||| ||  ||||| |||||||| | ||||||||||||| | | |||  ||||||| || ||||||||| |||| ||||||||||| ||     
T  32143257 aggtttaatagcagatttagcccc-taactttttcaaagttgcgattttgatctctaagagaaaaaaaattacaaaaccgccccttaagttttgcacctg 32143355  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  32143356 tggcagttttggcccc 32143371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 33399789 - 33399897
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||| |||||||| | ||||||||||||| |||  |||||||||| ||||||||||||   ||||||||||| ||  | | |||    
T  33399789 ttaatagcagttttagcccc-taacttttccaaagttgcgattttggccctctaagaaaaa-aactacaaaaccggaccctaagttttacatttgtggca 33399886  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  33399887 gttttggcccc 33399897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 2203407 - 2203353
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| ||||| |||||  ||||||||||||||||||| ||| ||||||||||||    
T  2203407 aaaaaaaactataaaactgccccctaagttttgcaactgtagtagttttggcccc 2203353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 17532310 - 17532364
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||| |||| ||||||||||| || | ||||||||||||||    
T  17532310 aaaaaaaactacaaaaccgccccttaagttttgcacctgtggcagttttggcccc 17532364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 5607065 - 5607016
Alignment:
Q  214 aggtttaatagcagtttccgccc-cctaacttttacgaagttgcgatttt 262  Q
    ||||||||||||||||| || || ||||| ||||||||||||||||||||    
T  5607065 aggtttaatagcagttttcgtccacctaatttttacgaagttgcgatttt 5607016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 266371 - 266312
Alignment:
Q  266 cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||| || ||||||||| |||| ||||||||||| || | ||||||||||||||    
T  266371 cctaagaaaaa-aattacaaaaccgccccttaagttttgcacctgtggcagttttggcccc 266312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 26311653 - 26311605
Alignment:
Q  278 aactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||||||||| |||||||||||  | | ||||||||||||||    
T  26311653 aactacaaaaccaccccttaagttttgcatatgtggcagttttggcccc 26311605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 214 - 324
Target Start/End: Original strand, 18186438 - 18186550
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||||||||||  |||| |||||||||||||||| |||||||||||||| ||| |  |||||||| |||||||||||| || |||||||||||||||| |    
T  18186438 aggtttaatagtggttttcgccccctaacttttatgaagttgcgattttggccttttaagaaaaaaaactacaaaaccgcctcctaagttttgcaactat 18186537  T
Q  312 agcagttttggcc 324  Q
    |||||||||||||    
T  18186538 agcagttttggcc 18186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 4050037 - 4049923
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||| |||||| ||||  ||||||||| |||||||||||| ||||||||| |||||||||     
T  4050037 aaggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccctaagaaaaa-aactacaaaaccgccccctaaggtttgcaactg 4049939  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  4049938 tagcagttttggcccc 4049923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 8074186 - 8074076
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taag-aaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||  |||| ||||| ||||||||||||  |||| ||||||||||||| ||||    
T  8074186 ttaatagcagttttcgccccctaactttcacgaagttacgattttagccccataagaaaaaaaaactacaaaaccgtccccaaagttttgcaactgtagc 8074087  T
Q  315 agttttggccc 325  Q
    |||||||||||    
T  8074086 agttttggccc 8074076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 20185231 - 20185118
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||||||||  |||    ||||| |||||||||||| || |||||||||||||||| ||    
T  20185231 aaggattaatagtagttttcgccccctaactttcacgaagttgcgattttgaccccctaaaaaaaaactacaaaaccgcctcctaagttttgcaactgta 20185132  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  20185131 gcagttttggcccc 20185118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 36580277 - 36580384
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| || ||||||||||| ||||||||| |||||| |  |||||||||||| ||||||||||||  |||||||||||||||||| |||||    
T  36580277 ttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaagaaaaa-aactacaaaaccgtcccctaagttttgcaactgtagca 36580375  T
Q  316 gttttggcc 324  Q
    |||||||||    
T  36580376 gttttggcc 36580384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 6792116 - 6792017
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| |||||||||||||||||  |||||||||||||| | ||||||||||||| |  |||||||||||| |||||||||||| ||||||||||||||||    
T  6792116 tttttaggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgccccctaagttttgca 6792017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 28350114 - 28350229
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||  ||||||||||||| |||||||| ||||||| ||||  ||||||||| |||||||||||| |||||||||||||||  ||     
T  28350114 aaggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcccctg 28350213  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  28350214 tggcagttttggcccc 28350229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 28785760 - 28785869
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |  ||||| | ||||| |||||||||||| ||||||||||||||||||| | | |    
T  28785760 taatagcagtttccgccccctaactttcacgaagttacgattttggccccctaggaaaaaaaaactacaaaaccgccccctaagttttgcaactgttgta 28785859  T
Q  316 gttttggccc 325  Q
    ||||||||||    
T  28785860 gttttggccc 28785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 14247292 - 14247406
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||| ||||||||| ||||||||| |||||| ||  ||||||||||| |||||||||||| |||| |||||||||||| |     
T  14247292 aaggcttaatagcagttttcgccacctaactttcacgaagttgtgattttggccgcctaagaaaaa-aactacaaaaccgccccataagttttgcaattg 14247390  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  14247391 tggcagttttggcccc 14247406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 15348274 - 15348158
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agcc-ctaag-aaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    |||| ||||||||||| | | |||||||||||| |||||||||||||||| | || ||||| ||||| |||||||||||| ||||||||||||||||||     
T  15348274 aaggcttaatagcagtattcaccccctaactttcacgaagttgcgattttgatcctctaagaaaaaaaaactacaaaaccgccccctaagttttgcaacc 15348175  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  15348174 gtagcagttttggcccc 15348158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 23746207 - 23746093
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taag-----aaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||||||||| || || |||||||||||||||||||||||||||||||||  ||||     ||||| ||||||||||||  || ||||||||||||||    
T  23746207 gtttaatagcagctttcgtcccctaacttttacgaagttgcgattttagccccttaagaagaaaaaaaaaactacaaaaccgtcctctaagttttgcaac 23746108  T
Q  309 tttagcagttttggc 323  Q
    | |||||||||||||    
T  23746107 tgtagcagttttggc 23746093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 5172818 - 5172729
Alignment:
Q  236 ccctaacttttacgaagttgcgatttt--agccctaa-gaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    |||||||||||||||||||||||||||    |||||| |||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  5172818 ccctaacttttacgaagttgcgattttgaccccctaaggaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagttttgg 5172729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 17876473 - 17876359
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| | |||||||||||| |||||||| ||||||| ||||  ||||||||| || |||||||||  ||  ||||||||||||||     
T  17876473 aaggcttaatagcagttttcaccccctaactttcacgaagttacgattttggccccttaagaaaaa-aattacaaaaccgtccattaagttttgcaactg 17876375  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  17876374 tagcagttttggcccc 17876359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 11373850 - 11373949
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgat-tttagccctaa-gaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| |||||||||||||||||||||||||||| || | |||||| |||||| |||||||||||| | | ||| ||||||||||| |||||    
T  11373850 ttaatagcagttttcgccccctaacttttacgaagttgcgatcttgacccctaaggaaaaaaaactacaaaaccgctctctatgttttgcaactgtagca 11373949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 324
Target Start/End: Complemental strand, 19645116 - 19645006
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||||||||| | |||||||||||| || ||| |||   ||| ||||||||||||||| ||    
T  19645116 aggtttaatagcaattttcgccccttaactttcacgaagttgcgattttggcccctaagaaaaa-aattaccaaattgccctctaagttttgcaactgta 19645018  T
Q  313 gcagttttggcc 324  Q
    ||||||||||||    
T  19645017 gcagttttggcc 19645006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 11374002 - 11374061
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||    
T  11374002 ccctaagaaaaa-aactacaaaactacaccctaagttttgcaactttagcagttttggccc 11374061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 47909697 - 47909803
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||  | |||||||||||||||  |||||||||||| |||||||||| | |||||||||||||||| || | |||    
T  47909697 ttaatagcagttttagccccctaactttcccaaagttgcgattttagccccctaagaaaaa-aactacaaaatcgccccctaagttttgcatctgtggca 47909795  T
Q  316 gttttggc 323  Q
     |||||||    
T  47909796 attttggc 47909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 20505320 - 20505229
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||||||||||| | ||||||| |||||| |||||||||||||| ||||    ||||| |||||||||||| ||||||||||| |||||||    
T  20505320 ttaatagcagttttcaccccctagcttttatgaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccctaagttgtgcaact 20505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 3247482 - 3247377
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||| || ||| || ||||||||||| ||||||||| |||||| |||| |  ||||| |||||||||||| || ||||| |||||||||| |||||||    
T  3247482 ttaataacaattttcgtcccctaactttcacgaagttgtgattttggccccataaaaaa-aactacaaaaccgcctcctaaattttgcaactgtagcagt 3247384  T
Q  318 tttggcc 324  Q
    |||||||    
T  3247383 tttggcc 3247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 36903578 - 36903472
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||||||   ||||||||||||| | | ||||||||||| ||||| | |||||  ||||||||||  | ||||||||||||||||| |||||||    
T  36903578 ttaatagcagttttaaccccctaactttttcaatgttgcgattttggcccttaaaaaaa--actacaaaactgcaccctaagttttgcaactgtagcagt 36903481  T
Q  318 tttggcccc 326  Q
    ||| |||||    
T  36903480 tttagcccc 36903472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 41243647 - 41243735
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  |||||||||||||| | ||||||| |||||||  |||||||||||| ||||||||||||  |||||||||||||||    
T  41243647 ttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaagaaaaa-aactacaaaacc-gcccctaagttttgca 41243735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 41243955 - 41243845
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||||||| ||  |||||||||| || ||||| ||||||| ||  ||||||||||| || |||||||| | ||| ||||||||||||||| |||     
T  41243955 ttaatagcagttttcggtccctaactttcacaaagttacgattttggcaccctaagaaaaaaaaactacaaaatcgcccactaagttttgcaactgtagt 41243856  T
Q  315 agttttggccc 325  Q
    |||||||||||    
T  41243855 agttttggccc 41243845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 9500213 - 9500124
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaa-ctacaaaaccaccccctaagttttg 304  Q
    |||||||||||||  ||||||||| ||| | |||||||||||||| |  |||||||||||| || |||||||||| ||||||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttggtcccctaagaaaaaaaaactacaaaaccgccccctaagttttg 9500124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 15029081 - 15029174
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| | |||||||||||||  |||  ||| ||||| |||||||||||| ||||||||||||||||  | | ||||||||||||||    
T  15029081 cccctaacttttccaaagttgcgattttgaccccctaataaaaaaaactacaaaaccgccccctaagttttgcacatgtggcagttttggcccc 15029174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 21505609 - 21505721
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||| |||||||||| || || ||| ||||||| |||||||||| ||||  |||||  |||||||| ||||||||||||  ||||||||||||| |    
T  21505609 ttttaaggcttaatagcagctttcgtcccttaactttcacgaagttgcaatttgggccctttaagaaaaaaaactacaaaacc-gcccctaagttttgta 21505707  T
Q  307 actttagcagtttt 320  Q
    ||| ||||| ||||    
T  21505708 actatagcattttt 21505721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 28350436 - 28350345
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||| |||||||||||| ||| ||||  ||||||||| |||||||||||| |||| ||||||||||| || | ||||||||||||||    
T  28350436 cccctaactttcacgaagttgcgactttggccccctaagaaaaa-aactacaaaaccgcccc-taagttttgcacctgtggcagttttggcccc 28350345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 48059257 - 48059168
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgc 305  Q
    |||||||||||||  | ||||||| ||||| ||||||| |||||| ||  || |||||||| |||||||||||| |||||||||||||||    
T  48059257 ttaatagcagttttaggcccctaagttttaagaagttgtgattttggcaccccaagaaaaaaaactacaaaaccgccccctaagttttgc 48059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 323
Target Start/End: Complemental strand, 3382116 - 3382025
Alignment:
Q  233 gccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    ||||||||||||||||||||||| |||||| | ||  ||||||||| |||||||||    || |||||||||||||||| |||||||||||||    
T  3382116 gccccctaacttttacgaagttgtgattttggtcccttaagaaaaa-aactacaaatttgcctcctaagttttgcaactgtagcagttttggc 3382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 35250432 - 35250321
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||||| ||||  ||||| ||||||| || |||||||||||||  |||    ||||| |||| ||||||  ||||||||||||||||||| ||    
T  35250432 aaggtttaatagcggtttttgcccc-taactttgacaaagttgcgattttgaccccctaaaaaa-aactgcaaaactgccccctaagttttgcaactgta 35250335  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  35250334 gcagttttggcccc 35250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 44312748 - 44312857
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||| |||||| || | |||||||||||||||||||||||||| | |||||| |||||   |||||||||  |  |||||||||||||||| || |||    
T  44312748 ttaataacagttttcgtctcctaacttttacgaagttgcgattttgacccctaaaaaaaaatgctacaaaacagcttcctaagttttgcaactgtaacag 44312847  T
Q  317 ttttggcccc 326  Q
    ||||| ||||    
T  44312848 ttttgacccc 44312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 3381885 - 3381975
Alignment:
Q  237 cctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||||   ||||||||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||  | | ||||||||||||||    
T  3381885 cctaacttttctaaagttgcgattttagtcccataagaaaaa-aactacaaaaccgccccctaagttttgcatatgtggcagttttggcccc 3381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 324
Target Start/End: Complemental strand, 18504562 - 18504444
Alignment:
Q  206 aaattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    |||||| |||| |||||| |||||| || ||||||||||| | |||||||||||||| | |||  | ||||| ||||| ||||||  ||| |||||||||    
T  18504562 aaatttaaaggcttaataacagttttcgtcccctaactttcatgaagttgcgattttgatccccta-aaaaaaaactaaaaaaccgtcccttaagttttg 18504464  T
Q  305 caactttagcagttttggcc 324  Q
    ||| | ||||||||||||||    
T  18504463 caattgtagcagttttggcc 18504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 323
Target Start/End: Complemental strand, 21505927 - 21505821
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||  | |||||||||||| | ||||||||||||| |  |||||||||||| |||||||||||  ||||||| | ||||||  | | ||||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccccctatgctttgcatatatggcag 21505828  T
Q  317 ttttggc 323  Q
    |||||||    
T  21505827 ttttggc 21505821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 21748125 - 21748082
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattt 261  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  21748125 ttaatagcagttttcgccccctaactttcacgaagttgcgattt 21748082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 21939385 - 21939275
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||||||| | | |||||||||||||||| |  |||||| ||||| || |||||  | ||||||||||||| ||  |||| |||    
T  21939385 ttaatagcagttttggccccctaagtatcacgaagttgcgattttggccccctaaaaaaaacaattacaatccaaccccctaagtttagccccttttgca 21939286  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  21939285 gttttggcccc 21939275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 23826333 - 23826224
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taag--aaaaagaactac-aaaaccaccccctaagttttgcaacttta 312  Q
    |||||||||||||  | ||||||||||| |||||||||||||||| ||||  ||||  ||||| |||||| |||| |  || ||||||||||||||| ||    
T  23826333 ttaatagcagtttttgtcccctaactttcacgaagttgcgattttggccccttaagaaaaaaaaaactacaaaaatcgtcctctaagttttgcaactgta 23826234  T
Q  313 gcagttttgg 322  Q
    ||||||||||    
T  23826233 gcagttttgg 23826224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 28472633 - 28472580
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  28472633 aaaaaaaactacaaaaccgcccc-taagttttgcaactgtagcagttttggcccc 28472580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 45718182 - 45718089
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||||||| |||  ||| ||||||||| |||||||||||| ||| | |   ||||||||| |||||||||| | |||||||||||||||||||    
T  45718182 ttaatagcaatttttgcctcctaactttcacgaagttgcgaatttggtcaattaagaaaaaaaactacaaaatcgccccctaagttttgcaact 45718089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 29834472 - 29834372
Alignment:
Q  208 attttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgc 305  Q
    ||||||| ||||||||| |||||  |||||||||||||| | ||||||  ||||| | |||  || ||||| || ||||||||| |||||||||||||||    
T  29834472 attttaaagtttaatagtagttttagccccctaacttttccaaagttgtaattttggtcctctaaaaaaaaaaaatacaaaaccgccccctaagttttgc 29834373  T
Q  306 a 306  Q
    |    
T  29834372 a 29834372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 13889475 - 13889562
Alignment:
Q  237 cctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    ||||||||| |||||||||  ||||| |  |||||| ||||| |||||||||||| || |||||||||||||| |  |||||||||||    
T  13889475 cctaactttcacgaagttgtaattttggtcccctaaaaaaaacaactacaaaaccgcctcctaagttttgcaagtgcagcagttttgg 13889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 15347951 - 15348043
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||| |||||||| ||||  |||||||||||||    ||||||||||||| | |||||||||||  ||||||||||||| |||||||||||||||    
T  15347951 taaggcttaatagccgttttagccccctaactttcctaaagttgcgattttgacccctaagaaaa--aactacaaaacca-cccctaagttttgca 15348043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 20184919 - 20185010
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| ||||||  || ||||||||||| | |||||||||||||||  ||||||| ||||| |||||||||||| || | |||||||||||    
T  20184919 ttaataacagttttagctccctaacttttccaaagttgcgattttagccccctaagaaaaaaaaactacaaaaccgcctcttaagttttgca 20185010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 40872218 - 40872278
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| ||||||||||||  ||| ||||||||| |||| ||||||||| |||||    
T  40872218 ccctaagaaaaaaaactacaaaaccgtcccataagttttgtaactgtagcagtttaggccc 40872278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 42256602 - 42256677
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||| | |||||||||||||||  ||||||| ||||| ||| | |||||| ||||||||||||||||    
T  42256602 ccccctaactttttcaaagttgcgattttagccccctaagaaaaaaaaacaataaaaccgccccctaagttttgca 42256677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 46265865 - 46265955
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    ||||||||||||||||   |||| ||| ||||| ||||||| |||||| |  |||||||||||| |||||||||||| || |||||||||||    
T  46265865 ggtttaatagcagttttaaccccttaagttttaagaagttgggattttggccccctaagaaaaa-aactacaaaaccgcctcctaagttttg 46265955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 48058859 - 48058974
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||   |||||||| ||| |  |||||| |||||| ||||  ||||||||| |||||||||| |  ||||||||||||||  ||     
T  48058859 aaggattaatagcagttttaaccccctaagtttcaacaagttgagattttggccccttaagaaaaaaaactacaaaatcgtcccctaagttttgcctctg 48058958  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  48058959 tggcagttttggcccc 48058974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 6726261 - 6726369
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||| |||||| |||||| || |||| ||||||||||||||||  ||||  |||||||| ||||| |||| | ||| ||| |||||| |||| |||||    
T  6726261 ttaataacagttttcgcccc-tacctttcacgaagttgcgattttgaccctctaagaaaaa-aactataaaagccccctctatgttttgaaactgtagca 6726358  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  6726359 gttttggcccc 6726369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 18504295 - 18504354
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||||  ||||||||||| ||||||||||||||||  | | ||||||||||||    
T  18504295 ccctaagaaaaaatactacaaaaccgccccctaagttttgcatatgtggcagttttggcc 18504354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 24432978 - 24433063
Alignment:
Q  235 cccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttt 319  Q
    ||||||||||| |||||||||||||||| |  |||||||||||| | ||||||||||  | ||||||||||| |||| ||| |||||    
T  24432978 cccctaactttcacgaagttgcgattttggccccctaagaaaaa-agctacaaaaccgtctcctaagttttgtaactgtagtagttt 24433063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 35250122 - 35250227
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| |||||  |||| ||||||||| | ||||||||||||| | ||  ||||||||| ||||| |||||| ||| |||||||||||| ||||  ||    
T  35250122 ttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaa-aactataaaaccgccctctaagttttgcatctttgaca 35250220  T
Q  316 gttttgg 322  Q
    |||||||    
T  35250221 gttttgg 35250227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 9477131 - 9477185
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc 267  Q
    ||||||||||||||||||  ||||||||  |||||  ||||||||||||||||||    
T  9477131 aaggtttaatagcagttttggccccctatgttttaaaaagttgcgattttagccc 9477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 15106991 - 15107105
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaacttt 311  Q
    |||||||||||||||||  |||| ||||||| |   |||||| |||||| | | |||||||||| || ||||||||    ||| |||||||||||||| |    
T  15106991 aggtttaatagcagttttagccctctaacttgtctaaagttgtgattttggtctctaagaaaaaaaaactacaaaattgtcccttaagttttgcaactat 15107090  T
Q  312 agcagttttggcccc 326  Q
    |||||||||||||||    
T  15107091 agcagttttggcccc 15107105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 18186765 - 18186656
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaag-aaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||||||||||||||  |||||||||||||| | ||||| |||||||    ||||||| ||||| ||||| ||||||  ||| ||||||||||| || |     
T  18186765 gtttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaaaaaactataaaaccgtcccttaagttttgcatctgtg 18186666  T
Q  313 gcagttttgg 322  Q
    ||||||||||    
T  18186665 gcagttttgg 18186656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 35793378 - 35793424
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag 264  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  35793378 ttaatagcagttttggccccctaaattttaggaagttgcgattttag 35793424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 46199047 - 46199166
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| |||||||||||||   ||| |||  ||||| |||||||||||||| |  ||||||  |||  ||||||||||||||||||||||| |||      
T  46199047 tttttaggcttaatagcagttttgcccctctatattttaagaagttgcgattttggtcccctaaataaataaactacaaaaccaccccctaagtattgat 46199146  T
Q  307 actttagcagttttggcccc 326  Q
      ||| ||||||||||||||    
T  46199147 ttttttgcagttttggcccc 46199166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 2653956 - 2654067
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc---taagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||||||  ||| |||||||||||||||||||||||||| ||||   ||||| ||| ||||||||||||| | |||||||||||||||| ||||    
T  2653956 ttaatagcagtttttgcctcctaacttttacgaagttgcgattttggcccccttaagataaaaaactacaaaaccatctcctaagttttgcaactgtagc 2654055  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  2654056 agttttggcccc 2654067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 35393989 - 35393870
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| ||||||||||||| | |||||||||||| |||||||||||||||| | |||  |||||||| |||||||||||| ||||||| |||||| |    
T  35393989 tttttaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggacctctaagaaaaaaaactacaaaaccgccccctaggttttgta 35393890  T
Q  307 actttagcagttttggcccc 326  Q
    ||| ||||||||||||||||    
T  35393889 actgtagcagttttggcccc 35393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 50769672 - 50769564
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| ||||    ||||| ||||| |||||| ||  ||||||||||||||| |||||||    
T  50769672 ttaaaagcagttttcgccccctaacttttacgaagttgcgattttggccccctaaaaaaaaactataaaaccgcctactaagttttgcaactgtagcagt 50769573  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  50769572 tttggcccc 50769564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 16292587 - 16292469
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaag-aaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||| |||||||||| || ||| |||||||||||||| ||||||||||||||||  |||| || ||||| |||||||||| |  ||||||||||||||||    
T  16292587 tttttaggtttaataacaattttcgccccctaactttcacgaagttgcgatttttaccctcagaaaaaaaaactacaaaatcgtcccctaagttttgcaa 16292488  T
Q  308 ctttagcagttttggcccc 326  Q
    || ||| ||||||||||||    
T  16292487 ctgtagtagttttggcccc 16292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 21957778 - 21957668
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||| | ||||||||||||| ||| |||||||||| || |||||||||| || |||||||||||||||| |||||    
T  21957778 ttaatagcagttttagccccctaacttttccaaagttgcgattttggcctctaagaaaaaaaaactacaaaaccgcctcctaagttttgcaactgtagca 21957679  T
Q  316 gttttggcccc 326  Q
    |||||| ||||    
T  21957678 gttttgacccc 21957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 1420538 - 1420645
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||| | ||||||||||||| |||  |||| ||||| |||||||||||| ||||||||||||||||||| || ||    
T  1420538 ttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaaaaaaaa-aactacaaaaccgccccctaagttttgcaactatatca 1420636  T
Q  316 gttttggcc 324  Q
    |||||||||    
T  1420637 gttttggcc 1420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 11824509 - 11824398
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aag--aaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||  |||  ||||| |||||||||  | ||||||||||||||||||| |||    
T  11824509 ttaataacagtttccgccccctaacttttacgaagttgcgattttggctctcaaagaaaaaaaaaactacaaattcgccccctaagttttgcaactgtag 11824410  T
Q  314 cagttttggccc 325  Q
     |||||||||||    
T  11824409 tagttttggccc 11824398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 14449274 - 14449386
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||| |  |||||||||||| |||||||||||   ||  |||||||||||||| ||     
T  14449274 gtttaatagcagttttcgccccctaactttcacgaagttgagattttggccccctaagaaaaacaactacaaaactgtcctttaagttttgcaactatac 14449373  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  14449374 cagttttggcccc 14449386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 6614850 - 6614958
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||| ||| || ||| ||||||| |||||||||||||||| || |  |||||||||  |||||||||||| |||||||||||||||||| |||||    
T  6614850 ttaatagcatttttcgacccttaactttcacgaagttgcgattttggctccttaagaaaaa--actacaaaaccatcccctaagttttgcaactgtagca 6614947  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  6614948 gttttggcccc 6614958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 29697838 - 29697727
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    ||||| ||||||||||||| | || ||||||||| | |||||||||||||| | |||||||||||| ||||||||| ||  ||||||||||||||||||     
T  29697838 taaggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtccctaagaaaaaaaactacaaacccgtcccctaagttttgcaactg 29697739  T
Q  311 tagcagttttgg 322  Q
    ||| ||||||||    
T  29697738 tagtagttttgg 29697727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 52865374 - 52865472
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgc 305  Q
    ||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||| |  | |||||||||| ||||||| |||| |||||||||||||||    
T  52865374 ttttaaggtttaatagcagtttcagccccataagttttaagaagttgcgattttggtcctctaagaaaaaaaactacagaaccgccccctaagttttgc 52865472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 8965523 - 8965629
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||||||    ||||| |||||||||||| |||| |||||||||||||| |  ||    
T  8965523 gtttaatagaagttttcgcccccttacttttacgaagttgtgattttagccccctaaaaaaaaactacaaaaccgccccttaagttttgcaactgtgcca 8965622  T
Q  316 gttttgg 322  Q
    |||||||    
T  8965623 gttttgg 8965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 23759559 - 23759673
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||| ||||| |||||||||||||| |  ||||||||||||| ||||  ||||||||| ||||||||||||  ||||||| ||||||||||     
T  23759559 aaggcttaatagtagttttcgccccctaactttcataaagttgcgattttggccccttaagaaaaa-aactacaaaaccgtcccctaaattttgcaactg 23759657  T
Q  311 tagcagttttggcccc 326  Q
    ||| ||||||||||||    
T  23759658 tagtagttttggcccc 23759673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 27979007 - 27978900
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||| || ||| |||||||||||||| |||||||||||||||| |||||   ||||| ||||||||||||  |||||||||||| ||||| |||||||    
T  27979007 ttaataacatttttcgccccctaactttaacgaagttgcgattttggccctttaaaaaa-aactacaaaaccgtcccctaagttttacaactctagcagt 27978909  T
Q  318 tttggcccc 326  Q
    |||| ||||    
T  27978908 tttgacccc 27978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 4796039 - 4796148
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||| |||  | |||||||||||| | || |||||||||| |||||  |||||||| ||||||||||||||||  |||||||||||||| |||||    
T  4796039 ttaatagcatttttagtcccctaactttttcaaaattgcgattttggccctctaagaaaaaaaactacaaaaccaccca-taagttttgcaactgtagca 4796137  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  4796138 gttttggcccc 4796148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 14060760 - 14060867
Alignment:
Q  219 taatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||   ||||||||||||| | |||||||||||||  |||  |||||||||  ||||||||||| ||||||||| ||||||||| ||||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttgaccccctaagaaaaa--actacaaaaccgccccctaagctttgcaactatagcag 14060857  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  14060858 ttttggcccc 14060867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 49185869 - 49185760
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| | ||||| |||||| || ||||||||||||| ||||  ||||||||| |||||||||||| |||| |||||||||||||| | | |    
T  49185869 ttaatagcagttttcaccccc-aactttcacaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccttaagttttgcaactgttgta 49185771  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  49185770 gttttggcccc 49185760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 53924750 - 53924859
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| ||||  |||||||||||||| ||||||||| ||||||  |||  ||||||||| || |||||||||  |||||||||||||||||| |||||    
T  53924750 ttaatagtagttctcgccccctaactttcacgaagttgtgattttgaccccttaagaaaaa-aattacaaaaccgtcccctaagttttgcaactgtagca 53924848  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  53924849 gttttggcccc 53924859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 323
Target Start/End: Complemental strand, 3658242 - 3658129
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccc-taagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||||||||||||||||| || || |||||||||| |||||||||||||| | ||| ||||||||| ||||| |||||   || ||||||||||||||    
T  3658242 ttaaggtttaatagcagttttcgtcctctaacttttatgaagttgcgattttgatcccttaagaaaaa-aactaaaaaactgtcctctaagttttgcaac 3658144  T
Q  309 tttagcagttttggc 323  Q
    | |||||||||||||    
T  3658143 tgtagcagttttggc 3658129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 2016788 - 2016904
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||| || ||||||||||  |||||||||||||| | ||||||||||||| |||||  ||||||||  ||||||||||  ||||||||||||||||  |    
T  2016788 taaggcttgatagcagttttagccccctaacttttccaaagttgcgattttggccctcaaagaaaaaagactacaaaactgccccctaagttttgcacat 2016887  T
Q  310 ttagcagttttggcccc 326  Q
     | ||||||||||||||    
T  2016888 gtggcagttttggcccc 2016904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 2181435 - 2181326
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc-cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||| |||  || |||||||||||| |||||||||||||| || ||| |  ||||||||||||||||  ||| ||||||||||||||| || |||    
T  2181435 ttaatagcactttttgctccctaacttttatgaagttgcgattttggctccttaagaaaagaactacaaaactgccctctaagttttgcaactgtaacag 2181336  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  2181335 ttttggcccc 2181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 51362855 - 51362744
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccc-taag--aaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||||||||||||||| || |||||||||||||| |||||| |||||| | ||| ||||  ||||| ||||||||||||| || |||||||||||||||    
T  51362855 aggtttaatagcagttttcgtcccctaacttttacaaagttgtgattttgatcccttaagaaaaaaaaaactacaaaacca-cctctaagttttgcaact 51362757  T
Q  310 ttagcagttttgg 322  Q
     ||||||||||||    
T  51362756 gtagcagttttgg 51362744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 6207179 - 6207286
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||| ||||||||||  |||||||| |||||| | |  |||||||||| |||||||||||  |||| |||||||| ||||| |||||    
T  6207179 ttaatagcagttttcgctccctaactttagcgaagttgtgattttggactcctaagaaaaaaaactacaaaactgccccataagttttacaactgtagca 6207278  T
Q  316 gttttggc 323  Q
    ||||||||    
T  6207279 gttttggc 6207286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 37831592 - 37831683
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||| |  |||||||||||| |  ||||||||| ||||||||||||||    
T  37831592 ggtttaatagcagttttagccccctaagttttaagaagttgcgattttggccccctaagaaaaaaacttacaaaaccgccccctaagttttg 37831683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 53312289 - 53312400
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||||| |||  |||||||||||||| | ||||||||||||| ||||  ||||||||| || ||||||||||||||||||| |||||||  | | ||    
T  53312289 ttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaacaaactacaaaaccaccccctaaattttgcacatgtggc 53312388  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  53312389 agttttggcccc 53312400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 21322709 - 21322818
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||| ||| ||||| |||||||| | ||||||||||||||    | |||||||||| |||||||||||  | || ||||||||||||||||| |    
T  21322709 tttaatagcaattttcgccctctaactttcatgaagttgcgattttttttctctaagaaaaaaaactacaaaactgctccttaagttttgcaactttaac 21322808  T
Q  315 agttttggcc 324  Q
    ||||||||||    
T  21322809 agttttggcc 21322818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 51362534 - 51362652
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-----taagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||||||||||| |||||  ||||||||||||||   ||||||||||||| ||||      |||||||| |||||||||||| ||||||||||||||||     
T  51362534 aaggtttaatagtagttttagccccctaacttttctaaagttgcgattttggccccctaagaagaaaaaaaactacaaaaccgccccctaagttttgcat 51362633  T
Q  308 ctttagcagttttggcccc 326  Q
     | | ||||||||||||||    
T  51362634 atgtggcagttttggcccc 51362652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 10060010 - 10059899
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa--ctacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||||||||||  | ||||||| |||| | ||||||||||||| ||||  ||||||||| ||  |||||||||| |||||||||||||||| || | |    
T  10060010 ttaatagcagttttagacccctaattttttcaaagttgcgatttttgccccttaagaaaaaaaaaactacaaaaccgccccctaagttttgcatctgtgg 10059911  T
Q  314 cagttttggccc 325  Q
    ||||||||||||    
T  10059910 cagttttggccc 10059899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 35383763 - 35383874
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||    ||||| |||||||||| |  |||||||||||||| ||| ||    
T  35383763 aaggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggccc-cctaaaaaaaactacaaaatc-gcccctaagttttgccactgta 35383860  T
Q  313 gcagttttggcccc 326  Q
    ||| ||||||||||    
T  35383861 gcacttttggcccc 35383874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 54855570 - 54855509
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| | |||||||||||| |||||||| ||||||||||||    
T  54855570 ccctaagaaaaaaaactacaaaaccgctccctaagttttgtaactttagaagttttggcccc 54855509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 1420855 - 1420765
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  ||||| |||||||  | ||||| ||||||| |  ||||||||||||||||||||||||| |||| |||||||||||    
T  1420855 ttaatagcagttttagccccttaactttcccaaagttacgattttggtcccctaagaaaaagaactacaaaaccgccccataagttttgca 1420765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 2837204 - 2837102
Alignment:
Q  226 agtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    ||||| |||||| ||||||| | |||||||| ||||| ||||  ||||||||| || |||||||||| ||||||||||||| ||| | ||||||||||||    
T  2837204 agttttcgccccttaactttcaagaagttgcaattttggccccctaagaaaaaaaagctacaaaaccgccccctaagttttacaattgtagcagttttgg 2837105  T
Q  323 ccc 325  Q
    |||    
T  2837104 ccc 2837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 12719762 - 12719648
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaact 309  Q
    |||| |||||||||||||   ||||||||||||  | ||||||  ||||| ||||  ||||||||| || ||||||||||||||||||||||||||| ||    
T  12719762 aaggcttaatagcagttttaaccccctaactttcccaaagttgatattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttgcatct 12719663  T
Q  310 ttagcagttttggcc 324  Q
     | ||||||||||||    
T  12719662 gtggcagttttggcc 12719648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 25909490 - 25909580
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||   ||||||||||||| | |||||| |||||| ||||  ||||||||| ||||| |||||| ||||||||||||||||    
T  25909490 ttaatagcagttttaaccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactataaaaccgccccctaagttttgca 25909580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 10059742 - 10059792
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  10059742 aaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagttttgg 10059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 8965805 - 8965721
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttgg 322  Q
    ||||||| |||| | ||||||||||||| |||||||||||   ||||| |||||| |||||||||||||||| || | ||||||||||    
T  8965805 cccctaattttttcaaagttgcgattttggccctaagaaa---aactataaaaccgccccctaagttttgcatctgtggcagttttgg 8965721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 1571698 - 1571609
Alignment:
Q  237 cctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||| |||||||||||||||| |||   ||||||||| |||||||||| |||||  |||||||||||||| | ||||||||||||||    
T  1571698 cctaactttcacgaagttgcgattttggcctcataagaaaaa-aactacaaaatcaccca-taagttttgcaactgtggcagttttggcccc 1571609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 14449596 - 14449485
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ct--aagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||| |||||  |||||||||||||| | ||||||||||||| ||| ||  | |||||| |||||||||||| | ||||||||||||||  | | ||    
T  14449596 ttaatagtagttttagccccctaacttttccaaagttgcgattttggcctcttaaggaaaaaaaactacaaaaccgctccctaagttttgcatttgtggc 14449497  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  14449496 agttttggcccc 14449485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 21871695 - 21871588
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||| |||  |||||||||||||| | |||||||||||||  |||    ||||| |||||||||||| || ||||||||||||| |||| | |||    
T  21871695 ttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaa-aactacaaaaccgcctcctaagttttgcatctttggtagt 21871597  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  21871596 tttggcccc 21871588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 21927556 - 21927449
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||| |||  |||||||||||||| | |||||||||||||  |||    ||||| |||||||||||| || ||||||||||||| |||| | |||    
T  21927556 ttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaa-aactacaaaaccgcctcctaagttttgcatctttggtagt 21927458  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  21927457 tttggcccc 21927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 2836918 - 2836992
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||| | ||| ||||||||| ||||   |||||||| |||||||||||| ||||||||||||||||    
T  2836918 ccccctaacttttccaaagctgcgattttggcccccaaagaaaaaaaactacaaaaccgccccctaagttttgca 2836992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 4411542 - 4411491
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag 264  Q
    ||||||||||| |||||| |||||||||| ||| ||||||||||||||||||    
T  4411542 aaggtttaataacagttttcgccccctaattttcacgaagttgcgattttag 4411491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 44356707 - 44356599
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||| |||||||  | ||||||||||||| |||  |||||||||| || ||||||||| ||||||||||||||||  | | |||    
T  44356707 ttaatagcagttttagcccc-taactttctcaaagttgcgattttggccgcctaagaaaaa-aattacaaaaccgccccctaagttttgcatatgtggca 44356610  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  44356609 gttttggcccc 44356599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 21597453 - 21597511
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggc 323  Q
    ||||||||||||  |||| ||||||  |||||||||||||||||| |||||||||||||    
T  21597453 ccctaagaaaaaatactataaaaccgtcccctaagttttgcaactgtagcagttttggc 21597511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 43074614 - 43074668
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc 267  Q
    |||| ||||||||| ||| |||||||||||||| |||||||||||||||| ||||    
T  43074614 aaggcttaatagcaattttcgccccctaactttcacgaagttgcgattttggccc 43074668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 51233785 - 51233678
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaa-gttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||| |||||  ||||| |||||||||| || ||||||||||| |||| || |||||  ||||||||| | |||| ||| ||| |||||| ||||||    
T  51233785 ttaatagtagtttttgccccttaacttttacaaaagttgcgattttggccccaaaaaaaa--actacaaaatcgccccttaattttggcaactgtagcag 51233688  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  51233687 ttttggcccc 51233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 51371779 - 51371665
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||| ||||||| ||||| ||||||||||||||  ||||||||||||||| | ||||   ||||| ||| ||||||||  ||| ||||||||  |||| |    
T  51371779 aaggcttaatagtagttttcgccccctaactttctcgaagttgcgattttggtccctttaaaaaaaaacaacaaaaccgtcccttaagtttttaaactat 51371680  T
Q  312 agcagttttggcccc 326  Q
    ||| |||||||||||    
T  51371679 agccgttttggcccc 51371665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 6637075 - 6637178
Alignment:
Q  224 gcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    |||||||  ||||| ||||||| |||| ||||||||||| |  |||||||||||| || |||||||||  ||| |||||||||||||| |||| ||||||    
T  6637075 gcagtttttgccccttaactttcacgatgttgcgattttggtcccctaagaaaaa-aattacaaaaccgtcccttaagttttgcaactgtagcggttttg 6637173  T
Q  322 gcccc 326  Q
     ||||    
T  6637174 acccc 6637178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 14060996 - 14060904
Alignment:
Q  236 ccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||| |||| | ||||||||||||| ||  ||||||||||| |||||||||||   |||||||||||| || || | ||||||||||||||    
T  14060996 ccctaattttttcaaagttgcgattttggctccctaagaaaaaaaactacaaaactgtcccctaagttttacatctgtggcagttttggcccc 14060904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 20737496 - 20737435
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| | ||| |||| | |||||||| |||||||||| ||||||||||||||||    
T  20737496 ccctaagaaaaaaagctataaaatcgccccctaaattttgcaactatagcagttttggcccc 20737435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 49185574 - 49185656
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaag 299  Q
    |||||||||||||   ||||||||||||  | ||||||||||||| ||||  ||||||||| |||||||||||| |||||||||    
T  49185574 ttaatagcagttttaaccccctaactttccc-aagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaag 49185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 53312601 - 53312488
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||| |||||| | |||||||||||| ||||||||||||||||  ||  |||||||||| |||||||||| |  || ||||| | || ||||     
T  53312601 aaggcttaataacagttttcaccccctaactttcacgaagttgcgattttgacccactaagaaaaa-aactacaaaa-ctgcctctaagctctgtaactg 53312504  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  53312503 tagcagttttggcccc 53312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 20112138 - 20112253
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agcc-ctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |  ||||||||||||| |||||| ||||||| | || |||||||||| ||| ||||||  ||||||||  |||||||| |     
T  20112138 aaggcttaatagcagttttcaacccctaacttttaagaagttacgattttgatcctctaagaaaaaaaaccacaaaattaccccctacattttgcaattg 20112237  T
Q  311 tagcagttttggcccc 326  Q
    |||| ||||| |||||    
T  20112238 tagccgttttagcccc 20112253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 50769363 - 50769476
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaag-aaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||||||||   ||||||||||||  | |||||||||||||    ||||||| ||||| ||||||||||||  ||||||||||||||| || |    
T  50769363 ggtttaatagcagttttatccccctaactttcccaaagttgcgattttgcccccctaagaaaaaaaaactacaaaacc-gcccctaagttttgcatctat 50769461  T
Q  312 agcagttttggcccc 326  Q
     |||||||| |||||    
T  50769462 ggcagttttagcccc 50769476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 52463098 - 52462989
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||| ||||||  ||||||||| |||| | ||||||||||||| |  | |||||||||| |||||||||| | |||| ||||||||||| || |  ||    
T  52463098 ttaataacagttttagccccctaattttttcaaagttgcgattttgggcctctaagaaaaaaaactacaaaa-cgccccttaagttttgcatctatgaca 52463000  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  52462999 gttttggcccc 52462989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 54983851 - 54983894
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattt 261  Q
    ||||||||||||| || |||||||||||||||||| ||||||||    
T  54983851 ttaatagcagttttcgtcccctaacttttacgaagatgcgattt 54983894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 2017109 - 2016989
Alignment:
Q  208 attttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttg 304  Q
    ||||| ||| |||||||||||||  ||||| |||||||    ||||||||||||| |||   ||||||||| || ||||||||||| ||  |||||||||    
T  2017109 atttttaggcttaatagcagttttagccccataactttcctaaagttgcgattttggcctcataagaaaaaaaaactacaaaaccatcca-taagttttg 2017011  T
Q  305 caactttagcagttttggcccc 326  Q
    ||||| || |||||||||||||    
T  2017010 caactgtaacagttttggcccc 2016989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 326
Target Start/End: Original strand, 18937319 - 18937353
Alignment:
Q  292 cccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||||||||| ||||||||||||||||    
T  18937319 cccctaagttttgcaactgtagcagttttggcccc 18937353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 29697521 - 29697631
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||||||||||||||||||  | || ||||  ||  | ||||||||||||| |||  ||  |||| || ||||||||| |||||||||||||||| || |    
T  29697521 taaggtttaatagcagttttagtcctctaaaattatcaaagttgcgattttggcctcaaacaaaaaaattacaaaaccgccccctaagttttgcatctgt 29697620  T
Q  312 agcagttttgg 322  Q
     ||||||||||    
T  29697621 ggcagttttgg 29697631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 42526023 - 42526077
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||| |||| | |||||||||||| ||| ||||||||||||    
T  42526023 aaaaaaaactacaaaaccgccccattagttttgcaactgtagtagttttggcccc 42526077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 6207432 - 6207395
Alignment:
Q  269 aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6207432 aagaaaaaaaactacaaaaccgccccctaagttttgca 6207395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 6637376 - 6637265
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||||||||||| |||  ||||  ||| |||| | ||||| ||||||||||||  ||||||||| |||||||||| | |||| |||||||||||  | |     
T  6637376 ggtttaatagcacttttagccctttaattttttcaaagtttcgattttagccccctaagaaaaa-aactacaaaatcgccccttaagttttgcatttctg 6637278  T
Q  313 gcagttttggccc 325  Q
    |||||||||||||    
T  6637277 gcagttttggccc 6637265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 11983460 - 11983549
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagtt 301  Q
    |||||||||||| |||||  | ||| ||| |||| | ||||||||||||| |||| ||||||||| ||  |||||||| |||||||||||    
T  11983460 aaggtttaatagtagttttagtcccttaattttttcaaagttgcgattttggcccctaagaaaaaaaatcacaaaaccgccccctaagtt 11983549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 19909171 - 19909248
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaacc 289  Q
    |||| |||||||||||||   ||||||||||||  | ||||||||||||| | ||||||||| || ||||||||||||    
T  19909171 aaggcttaatagcagttttaaccccctaactttctcaaagttgcgattttggcccctaagaagaaaaactacaaaacc 19909248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 47999764 - 47999715
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    ||||| || ||||||||| |||| |||||||||||||| |||||||||||    
T  47999764 aaaaaaaattacaaaacctccccttaagttttgcaactgtagcagttttg 47999715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 4796349 - 4796241
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||||||  |||||||||||| | | || |||| ||||| |||| ||  |||| || || |||||| |||  ||||||||||| || | |||||    
T  4796349 ttaatagcagttttagccccctaacttatccaaaattgcaattttggccccaaagaaaaaaattataaaaccgccctttaagttttgcacctgtggcagt 4796250  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  4796249 tttggcccc 4796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 21871459 - 21871491
Alignment:
Q  293 ccctaagttttgcaactttagcagttttggccc 325  Q
    ||||||||||||||||| |||||||||||||||    
T  21871459 ccctaagttttgcaactgtagcagttttggccc 21871491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 21927320 - 21927352
Alignment:
Q  293 ccctaagttttgcaactttagcagttttggccc 325  Q
    ||||||||||||||||| |||||||||||||||    
T  21927320 ccctaagttttgcaactgtagcagttttggccc 21927352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 35615308 - 35615407
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||| | |||||||||||||  ||||||||||||||   ||||||||||||| |  ||||||   ||| |||||||||||  || |||||||||||||    
T  35615308 ttttaaagcttaatagcagttttagccccctaacttttctaaagttgcgattttggccccctaaaggaaaaaactacaaaactgcctcctaagttttgca 35615407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 47999551 - 47999642
Alignment:
Q  237 cctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||| | ||||||||||||| ||||  ||||||||| |||||||||||| | || |||||||| || || | ||||||||| ||||    
T  47999551 cctaattttttcaaagttgcgatttttgccccctaagaaaaaaaactacaaaaccgctccataagttttacatctgtggcagttttgacccc 47999642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 28712777 - 28712663
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||||||||||||| ||||||| |||||| |  |||||||||||| |||||||||| | |||||||||||||||||||     
T  28712777 aaggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggccccctaagaaaaa-aactacaaaatcgccccctaagttttgcaactg 28712679  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||| ||||    
T  28712678 tagcagttttgacccc 28712663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 1814556 - 1814661
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttt 319  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||| |||  ||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  1814556 atagtagttttcgccccctaacttttacgaagttgcaattttagtcccctagaaaaa-aactacaaaaccaccccttaagttttgcaactatagcagttt 1814654  T
Q  320 tggcccc 326  Q
    | |||||    
T  1814655 ttgcccc 1814661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 27178143 - 27178252
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    ||||||||||||| || |||||||||||||||||||||||||||   ||| ||||||||| |||||||||||| | ||||||||||||||| | |||||     
T  27178143 ttaatagcagttttcgtcccctaacttttacgaagttgcgatttggccccctaagaaaaataactacaaaaccgcaccctaagttttgcaaatatagcaa 27178242  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  27178243 ttttggcccc 27178252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 4474382 - 4474271
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||| ||||    ||||| || ||||||||| ||| ||||||||||||||| |||    
T  4474382 aggtttaatagcagttttctcctcctaacttttacgaagttgcgattttggccc-cctaaaaaaaattacaaaaccgccctctaagttttgcaactgtag 4474284  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  4474283 cagttttggcccc 4474271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 17773168 - 17773282
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||||||||||| || ||||||||||||| |  ||||||| |||| ||||||||||||  ||||||||||||||||||     
T  17773168 aaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaacc-gcccctaagttttgcaactg 17773266  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  17773267 tggcagttttggcccc 17773282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 19074469 - 19074583
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||||||||||| || ||||||||||||| |  ||||||| |||| ||||||||||||  ||||||||||||||||||     
T  19074469 aaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaacc-gcccctaagttttgcaactg 19074567  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  19074568 tggcagttttggcccc 19074583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 38958163 - 38958046
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccc-taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| ||||||||||||| |||||||||||||| ||||| || ||||||| ||||| |||||||||  ||||||||||| ||||||||||||||||    
T  38958163 tttttaggcttaatagcagttttcgccccctaactttcacgaaattacgattttgagcccctaagaaaaa--actacaaaaccgccccctaagttttgca 38958066  T
Q  307 actttagcagttttggcccc 326  Q
    ||| ||||||||||| ||||    
T  38958065 actgtagcagttttgacccc 38958046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 51315804 - 51315685
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| |||||||||||||  |||||||||||||  | ||||||||||||| ||||  ||||||||| |||||||||||| ||||||||||||||||    
T  51315804 tttttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgca 51315705  T
Q  307 actttagcagttttggcccc 326  Q
     || | ||||||||||||||    
T  51315704 cctgtggcagttttggcccc 51315685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 14856549 - 14856659
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||  |  ||||||||||| |||||||||| | |||| |||||||||||||| ||| |    
T  14856549 ttaatagcagttttcgcaccctaactttcacgaagttgcgattttgactccctaagaaaaaaaactacaaaatcgccccataagttttgcaactatagta 14856648  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  14856649 gttttggcccc 14856659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 44586100 - 44585987
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    ||||||||||||||||  |||||||||||||  | ||||||||||||| ||||  ||||||||| |||||||||||| |||||||||||||||  || |     
T  44586100 ggtttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcttctgtg 44586001  T
Q  313 gcagttttggcccc 326  Q
    ||||||||||||||    
T  44586000 gcagttttggcccc 44585987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 43747276 - 43747391
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||||||||||||||||| || ||  |||||||||||||||||||||||| |  |||||||||||| |||||||||| | |||  |||||||||||| |    
T  43747276 taaggtttaatagcagttttcgtcctataacttttacgaagttgcgattttggccccctaagaaaaa-aactacaaaatcgcccaataagttttgcaatt 43747374  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  43747375 gtagcagttttggcccc 43747391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 15979001 - 15978893
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||| |||||  ||||| ||||||||   || |||||||||| ||||||  ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  15979001 ttaatagtagttttagccccgtaacttttctaaaattgcgattttggccctataaaaaaaaactacaaaaccgccccctaagttttgcaactatagcagt 15978902  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  15978901 tttggcccc 15978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 19404401 - 19404509
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||| |||||| || ||||||||||| ||||||||||||||||||||||   | ||| |||||||||||  |||||||| |||||||||| |||||||    
T  19404401 ttaataacagttttcgtcccctaactttcacgaagttgcgattttagccctctaagaaaaaactacaaaactgccccctaaattttgcaactatagcagt 19404500  T
Q  318 tttggcccc 326  Q
    ||| |||||    
T  19404501 tttagcccc 19404509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 28944276 - 28944167
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  | |||||||||||||| ||||||||||||| |||   ||||||||| ||||||||||||  ||| ||||||||||||||| ||||    
T  28944276 ttaatagcagtttttgtcccctaacttttactaagttgcgattttggcctcataagaaaaa-aactacaaaaccgtcccttaagttttgcaacttcagca 28944178  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  28944177 gttttggcccc 28944167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 47189601 - 47189708
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||| |||||| ||| |||||||||||| |||||||||||||| ||||    ||||| ||||| |||||| |||| |||||||||||||| |||||||    
T  47189601 ttaataacagttttcgctccctaacttttatgaagttgcgattttggccccctaaaaaaaaactataaaaccgccccttaagttttgcaactgtagcagt 47189700  T
Q  318 tttggccc 325  Q
    ||||||||    
T  47189701 tttggccc 47189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 14349419 - 14349313
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||     |||| |||||||||||  || | |||||||||||||| || ||||    
T  14349419 ttaatagcagttttcgccccctaacttttacgaagttgcgattttaaccc--cctaaaaaaactacaaaactgcctcttaagttttgcaactgtaacagt 14349322  T
Q  318 tttggcccc 326  Q
    |||||||||    
T  14349321 tttggcccc 14349313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 44436440 - 44436501
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  44436440 ccctaagaaaaaaaactacaaaaccgccccctaagttttgcaactgtagcagttttggcccc 44436501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 324
Target Start/End: Original strand, 14340729 - 14340844
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||| ||||||| ||||| |||||||||||||| |||||||| ||||||| |  ||||| ||| || |||||||||||| ||||  |||||||||||     
T  14340729 ttaaggcttaataggagttttcgccccctaactttcacgaagttacgattttggtcccctacgaataaaaactacaaaaccgccccacaagttttgcaat 14340828  T
Q  309 tttagcagttttggcc 324  Q
    | ||||||||||||||    
T  14340829 tgtagcagttttggcc 14340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 3193092 - 3192983
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| | |||||||||||| | ||||||||||||||  |||  ||||||||| |||| |||||||  |||||||||||||||||| || ||    
T  3193092 ttaatagcagttttcaccccctaactttcaagaagttgcgattttgaccccctaagaaaaa-aacttcaaaaccgacccctaagttttgcaactgtaaca 3192994  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  3192993 gttttggcccc 3192983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 25154492 - 25154382
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||   ||||||||||||  | |||||| ||||||  ||  |||||||||| |||||||||||| |||| |||||||||||||| |||||    
T  25154492 ttaatagcagttttaaccccctaactttaccaaagttgtgattttgacctcctaagaaaaaaaactacaaaaccgccccttaagttttgcaactgtagca 25154393  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  25154392 gttttggcccc 25154382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 54464479 - 54464364
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaact 309  Q
    |||| |||||||||||||| || |||||||||| ||||| ||||||| || ||||  ||||||||| || ||||||||||  ||||||||||||||||||    
T  54464479 aaggcttaatagcagtttc-gctccctaactttcacgaatttgcgatattggccccctaagaaaaaaaaactacaaaaccggcccctaagttttgcaact 54464381  T
Q  310 ttagcagttttggcccc 326  Q
     | ||||||||||||||    
T  54464380 ctggcagttttggcccc 54464364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 86875 - 86768
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaac-tacaaaaccaccccctaagttttgcaactttagc 314  Q
    ||||||| ||||| || ||||||||||| | |||||||||||||| ||||  ||||||||| ||  ||||||||| || |||||||||||||||| ||||    
T  86875 ttaataggagttttcgtcccctaactttcatgaagttgcgattttggccccctaagaaaaaaaatatacaaaaccgcctcctaagttttgcaactgtagc 86776  T
Q  315 agttttgg 322  Q
    ||||||||    
T  86775 agttttgg 86768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 20432186 - 20432264
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaa 287  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||| ||| |  |||||||||||| ||||||||||    
T  20432186 ttaaggcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaagaaaaaaaactacaaaa 20432264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 53184828 - 53184719
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||   |||  |||  |||||||||  ||||    
T  53184828 ttaatagcagttttcgctccctaacttttacgaagttgcgatttttgccacctaagaaaaa-aactacaaaattgcccattaaaatttgcaactgaagca 53184730  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  53184729 gttttggcccc 53184719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 578726 - 578614
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttta 312  Q
    |||||||||| ||||||  ||| |||||||||| | ||||||||||||| | |||||||||||| ||||||||||||  |||||||||||| || || |     
T  578726 aggtttaatatcagttttagcctcctaacttttccaaagttgcgattttggcccctaagaaaaaaaactacaaaacc-gcccctaagtttttcacctgtg 578628  T
Q  313 gcagttttggcccc 326  Q
    | ||||||||||||    
T  578627 gtagttttggcccc 578614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 25902670 - 25902554
Alignment:
Q  212 taaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaact 309  Q
    ||||| |||||| ||||||  |||||||||||||  | ||||||||||||| ||  ||||||||||| |||||||||||| || | |||||||||||  |    
T  25902670 taaggcttaatatcagttttagccccctaactttctcaaagttgcgattttggctccctaagaaaaaaaactacaaaaccgcctcataagttttgcattt 25902571  T
Q  310 ttagcagttttggcccc 326  Q
     | ||||||||||||||    
T  25902570 gtggcagttttggcccc 25902554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 44433074 - 44433166
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagc-cctaagaaaaagaa--ctacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||| ||||||||| |||||| || ||||||||||| ||  ||| |||||| ||||||| ||||||||||| ||||||||||||||    
T  44433074 cccctaactttcacgaagttgtgattttggctcctaagaaaaaaaaaactaaaaaaccgccccctaggttttgcaactatagcagttttggcc 44433166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 44436660 - 44436599
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| |||||||||||||||| || | ||||||||||||||    
T  44436660 ccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcagttttggcccc 44436599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 28204483 - 28204586
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||| | ||    ||||| |||||||||| | |||||||| |||| ||||| |||||||    
T  28204483 ttaatagcagttttcgccccttaactttcacgaagttgcgatttt-gaccccctaaaaaaaactacaaaatcgccccctaaattttacaactgtagcagt 28204581  T
Q  318 tttgg 322  Q
    |||||    
T  28204582 tttgg 28204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 46226998 - 46226891
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    ||||||||||||| || ||||||||||| |||||||||||||||| | ||    ||||| ||||||||||||  ||| ||| |||||||||| |||||||    
T  46226998 ttaatagcagttttcgtcccctaactttcacgaagttgcgatttt-gaccccctaaaaaaaactacaaaaccgtcccataacttttgcaactgtagcagt 46226900  T
Q  318 tttggcccc 326  Q
    ||| |||||    
T  46226899 tttagcccc 46226891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 48348258 - 48348302
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  48348258 ttaatagcagttttcgccccctaacttttacgaagttgcgatttt 48348302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 54718992 - 54719103
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| || || |||||||| ||||||||||||||||  | ||||    |||| ||||| ||||||  || |||||||||||||||     
T  54718992 aaggcttaatagcagttttcgtccactaactttcacgaagttgcgattttgaacccct----aaaaaaactataaaaccgtcctctaagttttgcaactg 54719087  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  54719088 tagcagttttggcccc 54719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 35359295 - 35359185
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| ||||| | ||| |||||||| |||||||||  ||||| |||| ||||||||| || |||||||| | ||| ||||||||||||||| | |||    
T  35359295 ttaatagtagttttcaccctctaactttcacgaagttgtaattttggcccctaagaaaaacaaactacaaaatcgccctctaagttttgcaactatggca 35359196  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  35359195 gttttggcccc 35359185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 44433377 - 44433265
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag---ccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||||||||||  |||||||||||||| |  |||||||||||  |   ||||||| ||||| |||||||||||| ||||||||||||||||  | | |    
T  44433377 ttaatagcagttttagccccctaacttttccacagttgcgatttcggcctccctaagaaaaaaaaactacaaaaccgccccctaagttttgcatatgtgg 44433278  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  44433277 cagttttggcccc 44433265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 38957843 - 38957959
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaa-ctacaaaaccaccccctaagttttgcaact 309  Q
    |||| |||||||||||||  ||| ||||| ||||   ||||||||||||| |||||  |||||||| || |||||||||| ||||||||||||||||  |    
T  38957843 aaggcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccctttaagaaaaaaaaactacaaaaccgccccctaagttttgcattt 38957942  T
Q  310 ttagcagttttggcccc 326  Q
     | ||||||||||||||    
T  38957943 gtggcagttttggcccc 38957959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 44585839 - 44585900
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||| |||| |||||||||||| |||||||| |||||||||| |||||||||| |||||    
T  44585839 ccctaaggaaaaaaactacaaaaccgccccctaaattttgcaactgtagcagttttcgcccc 44585900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 51315562 - 51315607
Alignment:
Q  281 tacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  51315562 tacaaaaccgccccctaagttttgcaactgtagcagttttggcccc 51315607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 52008554 - 52008454
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttt 319  Q
    |||| ||||| |||| ||||||||  |||||||||| ||||| | |||||||||||| |||||||||||  |||  |||||||||||||| |||||||||    
T  52008554 atagtagttttcgcctcctaacttccacgaagttgcaattttggtccctaagaaaaa-aactacaaaactgccctgtaagttttgcaactatagcagttt 52008456  T
Q  320 tg 321  Q
    ||    
T  52008455 tg 52008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 25843651 - 25843599
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc 267  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||||||||||||    
T  25843651 ggtttaatagcagttttcgcgccctaacttttacgaatgtgcgattttagccc 25843599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 33329614 - 33329658
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  33329614 ttaatagcagttttcgccctctaacttttacgaagttgcgatttt 33329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 578431 - 578525
Alignment:
Q  232 cgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||| ||||||| ||||||||| |||||| | |||||||||||| |||||||||| |   ||||||||||||||||| |||  |||||||||||    
T  578431 cgccccttaactttcacgaagttgagattttgacccctaagaaaaa-aactacaaaatcgttccctaagttttgcaactgtagtggttttggcccc 578525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 1814864 - 1814775
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  ||| |||||||||| | ||||| ||||||| |  |||||||||||| ||||||||||||  |||||||||||||||    
T  1814864 ttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaagaaaaa-aactacaaaaccgtcccctaagttttgca 1814775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 8024828 - 8024887
Alignment:
Q  267 ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||| || ||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  8024828 ctaaggaaaaaaattacaaaaccgccccctacgttttgcaactgtagcagttttggcccc 8024887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 12759501 - 12759618
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaa-----aaagaactacaaaaccaccccctaagttttgc 305  Q
    |||| |||||| ||||||  ||||||||||||| | ||| |||||||||| ||||  ||||||     ||| |||||||||||| |||| ||||||||||    
T  12759501 aaggcttaataacagtttttgccccctaactttcaagaaattgcgattttggccccttaagaaggaaaaaaaaactacaaaaccgcccc-taagttttgc 12759599  T
Q  306 aactttagcagttttggcc 324  Q
    |||| ||||||||||||||    
T  12759600 aactgtagcagttttggcc 12759618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 27178458 - 27178368
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  |||| | ||||||| | |||||| ||||||  ||  |||| ||||| |||||||||||||||||||||||||||||    
T  27178458 ttaatagcagttttagccctccaactttttcaaagttgtgattttgacctgctaaaaaaaaaaactacaaaaccaccccctaagttttgca 27178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 44624892 - 44624833
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||| ||||||||| ||||    
T  44624892 ccctaagaaaaaaaactacaaaaccgccatctaagttttgcaactgtagcagtttcggcc 44624833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 25248998 - 25248888
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||  ||||| |||||  ||| ||| |||||||||||||||| |||     ||||| ||||||||| || |||  |||||||||||||| |||||    
T  25248998 gtttaataatagttttcgccctttaattttcacgaagttgcgattttggcctcctaaaaaaaaactacaaatccgccctttaagttttgcaactgtagca 25248899  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  25248898 gttttggcccc 25248888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 54719290 - 54719218
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||| | | ||||||||||||| |||  ||||||||||  ||||||||||| ||||||||||||||||    
T  54719290 ccccctaacttattcaaagttgcgattttggcctcctaagaaaaa--actacaaaaccgccccctaagttttgca 54719218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 25154179 - 25154273
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||||||   || ||||||||||   || |||| ||||||||||  ||||||||| ||||||||||| ||||  |||||||||||    
T  25154179 aggtttaatagcagttttaacctcctaacttttttaaaattgcaattttagccccctaagaaaaaaaactacaaaactaccctataagttttgca 25154273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 28712507 - 28712561
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtttt 320  Q
    |||||||||||| |||||||||| | |||||||||||||||| || ||||||||||    
T  28712507 ccctaagaaaaa-aactacaaaatcgccccctaagttttgcatctgtagcagtttt 28712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 50802662 - 50802751
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||   || | |||||||| | |||||| |||||| ||||  ||||||||| ||||||||||| |||||||||||||||||    
T  50802662 ttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaa-aactacaaaactaccccctaagttttgca 50802751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 50873215 - 50873126
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||   || | |||||||| | |||||| |||||| ||||  ||||||||| ||||||||||| |||||||||||||||||    
T  50873215 ttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaa-aactacaaaactaccccctaagttttgca 50873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 326
Target Start/End: Original strand, 36566952 - 36566986
Alignment:
Q  292 cccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||| ||||||||||||||||||||||||||||    
T  36566952 cccctatgttttgcaactttagcagttttggcccc 36566986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 43586571 - 43586631
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaa 276  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||| ||  |||||||||||    
T  43586571 tttaatagcagtttc-gccccttaacttttacggagttgcgattttggcctcctaagaaaaa 43586631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 43747535 - 43747481
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| |||||||||||| ||||||||||||||||  | | ||||||||||||||    
T  43747535 aaaaaaaactacaaaaccgccccctaagttttgcatttatggcagttttggcccc 43747481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 54464165 - 54464255
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccct-aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||||  | ||||||||||||   ||||| ||||||| | |||| ||||||||||||||||||||   |||||||||||||||    
T  54464165 ttaatagcagttttagtcccctaacttttctaaagttacgattttgatcccttaagaaaaagaactacaaaactgtcccctaagttttgca 54464255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 3916481 - 3916542
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||| | | | |||||||||||| || | ||||||||||||||    
T  3916481 ccctaagaaaaaaaactacaaaatcgctcactaagttttgcatctgtggcagttttggcccc 3916542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 28944080 - 28944141
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| ||||||| ||   ||||||||||||||||  | ||||||||||||||||    
T  28944080 ccctaagaaaaaaaactacataattgccccctaagttttgcacatgtagcagttttggcccc 28944141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 29512565 - 29512637
Alignment:
Q  233 gccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagtttt 303  Q
    |||||||||||||| | |||||||||||||  | ||||||||||||  ||||||||||| ||| |||| ||||    
T  29512565 gccccctaactttttcaaagttgcgattttggacccctaagaaaaaatactacaaaaccgccctctaaatttt 29512637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 36677527 - 36677614
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    |||||| |||||| ||||| |||||||| |||||||||||||||| |  |||||| ||||| |||||||||| |  ||| |||||||||    
T  36677527 ttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaa-aaaaaaaactacaaaatcttcccttaagttttg 36677614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 36687609 - 36687696
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    |||||| |||||| ||||| |||||||| |||||||||||||||| |  |||||| ||||| |||||||||| |  ||| |||||||||    
T  36687609 ttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaa-aaaaaaaactacaaaatcttcccttaagttttg 36687696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 49787253 - 49787361
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||| |||  |||| ||||||||| | ||||||| || || |  |||||||||||| ||||| ||||||| |||  |||||||||| || | |||    
T  49787253 ttaatagcaattttagccctctaacttttccaaagttgcaatcttggtcccctaagaaaaaaaactataaaaccatccctcaagttttgcatctgtggca 49787352  T
Q  316 gttttggcc 324  Q
    |||||||||    
T  49787353 gttttggcc 49787361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 86574 - 86686
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||||| |||  ||||||||||||||   ||||||| ||||| | |  ||||||||||  |||| |||||  | ||||||||||||||  | |    
T  86574 aggtttaatagcaattttagccccctaactttttaaaagttgctattttggtctactaagaaaaa--actataaaactgcgccctaagttttgcacttgt 86671  T
Q  312 agcagttttggcccc 326  Q
    |||||||||||||||    
T  86672 agcagttttggcccc 86686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 46226750 - 46226810
Alignment:
Q  266 cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||| |||||| || ||||| ||||||||||| |||||||| || | ||||||||||||||    
T  46226750 cctatgaaaaaaaattacaataccaccccctatgttttgcacctgtggcagttttggcccc 46226810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 48348570 - 48348479
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||| |||||   |||||||||||||   ||||||||||||| | |||  |||||||| |||||||||| | |||| |||||||||||    
T  48348570 tttaatagtagttttatccccctaacttttttaaagttgcgattttggtcctttaagaaaaataactacaaaatcgccccttaagttttgca 48348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 39642198 - 39642313
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||| |||  ||||  |||| |||||||||||| ||||||||||| ||||| |     
T  39642198 aaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgccccctaagttctgcaattg 39642297  T
Q  311 tagcagttttggcccc 326  Q
    ||||||||||||||||    
T  39642298 tagcagttttggcccc 39642313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 23891663 - 23891772
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| ||| |||||||||| ||||||||| |||||| ||||  ||||||||| |||||||||||| |||| |||||||||||||| |||||    
T  23891663 ttaatagcagttttcgctccctaactttcacgaagttgtgattttggccccctaagaaaaa-aactacaaaaccgccccttaagttttgcaactgtagca 23891761  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  23891762 gttttggcccc 23891772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 25085393 - 25085510
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaa 307  Q
    |||| ||| ||||||||||||| |||||||||||||| |  ||||||||||||| | |||||||||||| |||||||||||| ||| ||||||||| |||    
T  25085393 tttttaggcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccctaagaaaaaaaactacaaaaccgccctctaagttttacaa 25085492  T
Q  308 ctttagcagttttggccc 325  Q
    || ||||| |||||||||    
T  25085493 ctgtagcaattttggccc 25085510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 3377499 - 3377614
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||  |||||||||||||| | ||||||||||||| ||||  ||||||||| |||||||||||| ||||||||||||||||  |     
T  3377499 aaggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatttg 3377598  T
Q  311 tagcagttttggcccc 326  Q
    | ||||||||||||||    
T  3377599 tggcagttttggcccc 3377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 46573143 - 46573032
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    |||| |||||||||||||  | || ||||||||||||||||||||||||| |  |||||||||||| |||||||| ||  |||||||||||||||||||     
T  46573143 aaggcttaatagcagtttttgtcctctaacttttacgaagttgcgattttggtcccctaagaaaaaaaactacaacactgccccctaagttttgcaactg 46573044  T
Q  311 tagcagttttgg 322  Q
    ||||||||||||    
T  46573043 tagcagttttgg 46573032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 23220869 - 23220767
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagtt 318  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |  ||||  |||||| |||||||||||| ||||||||||||| ||||| ||||||||    
T  23220869 atagcagttttcgccccctaacttttacgaagttacgattttggtcccctctgaaaaa-aactacaaaaccgccccctaagttttacaactgtagcagtt 23220771  T
Q  319 ttgg 322  Q
    ||||    
T  23220770 ttgg 23220767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 3377822 - 3377714
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  |||||||||||||  | |||||| |||||| ||||  || |||||| ||||||||||||  ||||||||||||||||||||||||    
T  3377822 ttaatagcagttttagccccctaactttcccaaagttgtgattttggccccctaggaaaaa-aactacaaaaccgtcccctaagttttgcaactttagca 3377724  T
Q  316 gttttggccc 325  Q
    ||||||||||    
T  3377723 gttttggccc 3377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 1096766 - 1096650
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaact 309  Q
    |||||||||| ||||||| ||| | |||||||| ||||| |||||||||||||||  ||||||||| ||  |||||||||  |||||||| |||||||||    
T  1096766 aaggtttaattgcagttttcgctctctaactttcacgaaattgcgattttagccccttaagaaaaaaaatttacaaaaccgtcccctaagctttgcaact 1096667  T
Q  310 ttagcagttttggcccc 326  Q
     ||||||||||||||||    
T  1096666 gtagcagttttggcccc 1096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 50401686 - 50401580
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||||||||| |||||| ||| |||| ||||||||||||||| |  || ||||||||| ||||||||||||  || ||||||||||||||| |    
T  50401686 aggtttaatagcagttttcgccccttaattttttcgaagttgcgattttggctccttaagaaaaa-aactacaaaaccgtcctctaagttttgcaactgt 50401588  T
Q  312 agcagttt 319  Q
    ||||||||    
T  50401587 agcagttt 50401580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 326
Target Start/End: Complemental strand, 17761009 - 17760891
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaa 307  Q
    |||||| ||||||||||||| || | | |||||||||||||||||| |||||    |||||||||||| || |||||||||| |||| ||||||||||||    
T  17761009 ttaaggcttaatagcagttttcgtctcttaacttttacgaagttgcaattttgatcccctaagaaaaaaaaactacaaaaccgccccttaagttttgcaa 17760910  T
Q  308 ctttagcagttttggcccc 326  Q
     | ||||||||||||||||    
T  17760909 ttgtagcagttttggcccc 17760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 41997639 - 41997752
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    ||||||||||||| |||  ||||||||| ||| || ||||||||||||| ||||  ||||||||  |||||||||||| || | |||||||||||||| |    
T  41997639 aggtttaatagcaatttttgccccctaattttcacaaagttgcgattttggccccataagaaaac-aactacaaaaccgcctcataagttttgcaactgt 41997737  T
Q  312 agcagttttggcccc 326  Q
    |||||||||||||||    
T  41997738 agcagttttggcccc 41997752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 16874509 - 16874599
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgatt-ttagccctaag-aaaaagaactacaaaaccaccccctaagttttg 304  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| | | ||||||| ||||| |||||||||||| |||| |||||||||    
T  16874509 gtttaatagcaattttcgccccctaacttttacgaagttgcgattatgacccctaagaaaaaaaaactacaaaaccgccccttaagttttg 16874599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 50226388 - 50226505
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||| |||||  ||||||  |||||||||||||| | ||||||||||||| ||||  ||||||| |  ||||||||||| |||||||||||| | |||    
T  50226388 ttaaggcttaattacagttttagccccctaactttttcaaagttgcgattttggccccctaagaaagaatactacaaaaccgccccctaagtttcggaac 50226487  T
Q  309 tttagcagttttggcccc 326  Q
    | ||||||||||||||||    
T  50226488 tatagcagttttggcccc 50226505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 12960849 - 12960958
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||| ||||||  |||| ||||||||| | ||||||||||||| ||| |  | ||||| |||||||||||| || |||||||||||||||| ||||||    
T  12960849 ttaataacagttttagcccgctaactttttcaaagttgcgattttggcctcccaaaaaaaaaactacaaaaccgcctcctaagttttgcaactatagcag 12960948  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  12960949 ttttggcccc 12960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 46880738 - 46880850
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||||| | |  ||||||||| ||||| ||||   ||||||||||||| ||| | |||    
T  46880738 ggtttaatagcagttttcgctccctaatttttacgaagttgcgattttgatctttaagaaaaaaaactataaaattgccccctaagttttacaagtgtag 46880837  T
Q  314 cagttttggcccc 326  Q
    || ||||||||||    
T  46880838 catttttggcccc 46880850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 14979111 - 14979006
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| ||||| |||||||||||||| | |||||||| ||||| |||  |||||||||| | |||||||||| |||||||| |||||||||| ||| |    
T  14979111 ttaatagaagttttcgccccctaactttcatgaagttgcaattttggcctcctaagaaaaata-ctacaaaaccgccccctaaattttgcaactgtagta 14979013  T
Q  316 gttttgg 322  Q
    |||||||    
T  14979012 gttttgg 14979006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 16545878 - 16545766
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaa--gaaaaagaactacaaaaccaccccctaagttttgcaac 308  Q
    |||||||||||  ||||| |||  | |||||||||||||||||||||||||||  |||||   ||||| ||||||||||||  ||||||| |||||||||    
T  16545878 aaggtttaataatagttttcgcttcttaacttttacgaagttgcgattttagcctcctaaagaaaaaaaaactacaaaaccgtcccctaaattttgcaac 16545779  T
Q  309 tttagcagttttg 321  Q
    | |||||||||||    
T  16545778 tgtagcagttttg 16545766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 46912188 - 46912302
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag-ccctaagaaaaagaactacaaaaccaccccctaagttttgcaacttt 311  Q
    |||||||||||||||||| ||| || ||||||| |||||||||||||||| | | |||| ||||| || ||||||||   |||||||||||||||| | |    
T  46912188 aaggtttaatagcagttttcgctccttaactttcacgaagttgcgattttggtctctaaaaaaaaaaattacaaaactgtcccctaagttttgcaattgt 46912287  T
Q  312 agcagttttggcccc 326  Q
    || ||||||| ||||    
T  46912288 agaagttttgacccc 46912302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 49425987 - 49426103
Alignment:
Q  207 aattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    |||||| ||||||||||| ||||| ||  ||||||||||| | || |||||||||| ||  ||||||||| | |||||||||| || || ||||||||||    
T  49425987 aattttgaggtttaatagtagttttcgtaccctaactttttcaaatttgcgattttggcatcctaagaaataaaactacaaaatcatcctctaagttttg 49426086  T
Q  305 caactttagcagttttg 321  Q
    ||| | |||||||||||    
T  49426087 caattgtagcagttttg 49426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 18632650 - 18632606
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  18632650 ttaatagcagttttcgccccctaacttttacgaagttgcgatttt 18632606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 15659034 - 15659093
Alignment:
Q  267 ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||| ||||||| |||| |||||||||||||||||||  |||||||||||||||    
T  15659034 ctaagaaaaaaaactacacaaccgccccctaagttttgcaactggagcagttttggcccc 15659093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 25486523 - 25486413
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||| |  || |||||  ||||| |||     |||||||||||| ||||| |||||    
T  25486523 ttaatagcagtttttgccccctaactttcacgaagttgcgattttagctctttatgaaaataaactataaatttgtcccctaagttttacaactatagca 25486424  T
Q  316 gttttggcccc 326  Q
    |||||||||||    
T  25486423 gttttggcccc 25486413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 45739247 - 45739137
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||| ||||| || ||  ||||||| |||||||||||||||| ||| |   ||||| || ||||||||  |||| |||||||||||||| ||||    
T  45739247 ggtttaatagtagttttcgtcctttaactttcacgaagttgcgattttggcc-tcctaaaaaaaattacaaaactgccccataagttttgcaactgtagc 45739149  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  45739148 agttttggcccc 45739137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 14978800 - 14978909
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||||||||||  |||||||||||||| | |||||||||||||  | |||   ||||| |||||||||||  |||||||||||||||| || | | ||    
T  14978800 ttaatagcagttttagccccctaacttttccaaagttgcgattttgggtccttcaaaaaaaaactacaaaactgccccctaagttttgcacctgtggtag 14978899  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  14978900 ttttggcccc 14978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 17760680 - 17760795
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa--ctacaaaaccaccccctaagttttgcaac 308  Q
    |||| |||||||||| ||  ||||||||||||   | ||||||||||||| ||||  ||||||||| ||  |||||||||||||||||||||||||||      
T  17760680 aaggcttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaaaaaaactacaaaaccaccccctaagttttgcata 17760779  T
Q  309 tttagcagttttggcc 324  Q
    | | ||||||||||||    
T  17760780 tgtggcagttttggcc 17760795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 32295003 - 32295064
Alignment:
Q  265 ccctaagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| || ||||||||||||| |||||||||||||| | |||||||||||||||    
T  32295003 ccctaagaaaaataaactacaaaaccacctcctaagttttgcaattgtagcagttttggccc 32295064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 7060621 - 7060741
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt-agcc-ctaag-aaaaagaactacaaaaccaccccctaagttttgc 305  Q
    |||| ||||||||||||||||| ||| |  ||||||||| |||||||||||||| | || ||||| ||||| || ||||||||| ||| |||||||||||    
T  7060621 tttttaggtttaatagcagttttcgctctttaacttttatgaagttgcgattttgatcctctaagaaaaaaaaattacaaaaccgccctctaagttttgc 7060720  T
Q  306 aactttagcagttttggcccc 326  Q
    |||| || || ||||| ||||    
T  7060721 aactgtaacaattttgacccc 7060741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 48319727 - 48319609
Alignment:
Q  207 aattttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcccta--agaaaaagaactacaaaaccaccccctaagttttg 304  Q
    ||||||| || ||||||||||||| || ||| ||||||| || ||||||| |||||  | | |  ||||||| || |||||| || ||||||||||||||    
T  48319727 aattttatggcttaatagcagttttcgtccc-taactttcacaaagttgctattttgactcaatgagaaaaaaaattacaaagccgccccctaagttttg 48319629  T
Q  305 caactttagcagttttggcc 324  Q
    ||||| ||||||||||||||    
T  48319628 caactgtagcagttttggcc 48319609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 6320891 - 6320782
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaac--caccccctaagttttgcaactttag 313  Q
    |||||| |||||| |||||| ||||||||| |||||||||||||| |  |||||||||||  |||||  ||||  | ||||||||||||||||||| |||    
T  6320891 ttaataccagttttcgcccc-taacttttaagaagttgcgattttggccccctaagaaaa--aactatgaaaccgccccccctaagttttgcaactgtag 6320795  T
Q  314 cagttttggcccc 326  Q
    |||||| ||||||    
T  6320794 cagtttcggcccc 6320782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 18216689 - 18216794
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    |||||| |||||| ||||| |||||||||| |||||| | ||||| ||||  ||||||||| |||| ||||||  ||| ||||||||| ||||| |||||    
T  18216689 ttaataacagttttcgccctctaacttttatgaagttacaattttggccccctaagaaaaa-aacttcaaaacagccctctaagttttccaactatagca 18216787  T
Q  316 gttttgg 322  Q
    |||||||    
T  18216788 gttttgg 18216794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 7579661 - 7579757
Alignment:
Q  213 aaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc---taagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||||||||   |||| |||||||    ||||||||||||| ||||   ||||||||| |||||||||||| ||| ||||||||||||    
T  7579661 aaggtttaatagcagttttaaccccttaactttccaaaagttgcgattttggcccccctaagaaaaaaaactacaaaaccgcccgctaagttttgca 7579757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 326
Target Start/End: Original strand, 6569528 - 6569639
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    ||||||||||||||| |||| ||||| |||||| || ||| ||||||    |||||||||||| || ||||||||| ||||  || |||||||| | |||    
T  6569528 gtttaatagcagttttcgcctcctaatttttacaaaattgtgattttgaccccctaagaaaaa-aattacaaaaccgcccctaaaattttgcaattgtag 6569626  T
Q  314 cagttttggcccc 326  Q
    |||||||||||||    
T  6569627 cagttttggcccc 6569639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 324
Target Start/End: Complemental strand, 7579957 - 7579866
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttagcc--ctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    ||||||||||||| | ||||||  |||||||||  |||||||||| ||||||||||||  ||||||| |||||||| | ||| ||||||||||    
T  7579957 ccccctaactttttcaaagttgttattttagccgcctaagaaaaaaaactacaaaacc-gcccctaaattttgcaattgtagtagttttggcc 7579866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 324
Target Start/End: Complemental strand, 14190837 - 14190745
Alignment:
Q  234 ccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcc 324  Q
    |||| |||||||||| ||||||| ||||||||||  ||||||||| ||||||||||   ||| | |||||||||| || | ||||||||||||    
T  14190837 ccccataacttttacaaagttgcaattttagccctataagaaaaaaaactacaaaaaggccctcgaagttttgcatctgtggcagttttggcc 14190745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 39642469 - 39642409
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||| |||||||||||| ||||||||||||||||  | | ||||||||||||||    
T  39642469 ccctaagaaaaa-aactacaaaaccgccccctaagttttgcatttgtggcagttttggcccc 39642409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 51251444 - 51251392
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    |||||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  51251444 ttttaaggtttagtagcagtttttgcccc-taacttttacgaagttgcgatttt 51251392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 8009729 - 8009821
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagcc-ctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||||||  |||  | ||||||| ||||||||||||||| ||| |||| ||||| || ||||||||| | ||| ||||||||||    
T  8009729 ggtttaatagcagttttagccttcaaactttttcgaagttgcgattttggcctctaataaaaaaaattacaaaaccgctcccgaagttttgca 8009821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 50226648 - 50226592
Alignment:
Q  270 agaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||| |||||| ||||| ||| |||||||||||| || ||||||||||||||||    
T  50226648 agaaaaaaaactactaaaccgccctctaagttttgcacctgtagcagttttggcccc 50226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 50401393 - 50401464
Alignment:
Q  237 cctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||| | || |||||||||| |  |||||||||| | |||||||||||| ||||||||||||||||    
T  50401393 cctaactttttcaaaattgcgattttggtcccctaagaaatataactacaaaaccgccccctaagttttgca 50401464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 52321253 - 52321344
Alignment:
Q  215 ggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttg 304  Q
    ||||||||||||||||   ||||  || ||||| ||||||||||||||||| |  ||||||||| ||| ||||||||  |||||||||||||    
T  52321253 ggtttaatagcagttttaacccctcaagttttaagaagttgcgattttagctccttaagaaaaataacaacaaaaccgtcccctaagttttg 52321344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 3612124 - 3612217
Alignment:
Q  235 cccctaacttttacgaagttgcgatttt--agccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||| ||||| ||||||||||||||  | |||||||||||| |||||||||| |  ||||||| ||||||   | | ||||||||||||||    
T  3612124 cccctaagttttaagaagttgcgattttgaacccctaagaaaaaaaactacaaaatcgtcccctaaattttgcctatgtggcagttttggcccc 3612217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 12961157 - 12961049
Alignment:
Q  216 gtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttag 313  Q
    |||||||||||||||  ||| ||||| |||| | ||||||||||||| |   ||||||||||| ||||||||||    ||||||| |||||||||| | |    
T  12961157 gtttaatagcagttttagcctcctaattttttcaaagttgcgattttggtttcctaagaaaaa-aactacaaaattgtcccctaaattttgcaactgtgg 12961059  T
Q  314 cagttttggc 323  Q
    ||||||||||    
T  12961058 cagttttggc 12961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 16874814 - 16874707
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc---taagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||||||   ||||||||||||  | ||||||| ||||| | ||   ||||||||| |||||||||||| |||| ||||||||||| || | ||    
T  16874814 ttaatagcagttttaaccccctaactttctcaaagttgcaattttggaccctctaagaaaaa-aactacaaaaccgccccataagttttgcatctgtggc 16874716  T
Q  315 agttttggc 323  Q
    |||||||||    
T  16874715 agttttggc 16874707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 17692941 - 17692887
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||| ||||||||||||  |||||||||||||||| | ||| ||||||||||||    
T  17692941 aaaaaaaactacaaaaccgtcccctaagttttgcaattgtagaagttttggcccc 17692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 14190607 - 14190660
Alignment:
Q  273 aaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||| ||||||| ||| |||| |||||||||||| || ||||||||||||||||    
T  14190607 aaaaaaactacataacgaccctctaagttttgcatctgtagcagttttggcccc 14190660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 45738988 - 45739048
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    ||||||| |||| |||||||||||| |||| ||||||||||| || | ||||||||||||||    
T  45738988 ccctaaggaaaa-aactacaaaaccgccccttaagttttgcatctatggcagttttggcccc 45739048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 46572878 - 46572919
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||||||||||| ||||||||||||  |||||||||||||||    
T  46572878 ccctaagaaaaaaaactacaaaaccgtcccctaagttttgca 46572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 49426286 - 49426193
Alignment:
Q  233 gccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||||| | |||||||||||||||||||   | ||| |||||||||||    || |||||||||||  | | ||||||||||||||    
T  49426286 gccccctaacttttccaaagttgcgattttagccctctaagaaaaaactacaaaactgttccttaagttttgcatttgtggcagttttggcccc 49426193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 1096470 - 1096580
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaact-acaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||| ||||||  ||||| |||||||| | ||||||||||||| |  |||||| ||||| |||| |||||||| ||| |||||||| ||| || | ||    
T  1096470 ttaataacagttttagccccttaacttttccaaagttgcgattttggtcccctaa-aaaaaaaactaacaaaaccgccctctaagtttcgcatctgtggc 1096568  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  1096569 agttttggcccc 1096580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 8010035 - 8009937
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| ||||||| |||||  ||| |||||||||||||||||||  ||||| |  ||| |||||||| || ||||||| || |||||||||||||||    
T  8010035 tttttaggcttaatagtagttttagcctcctaacttttacgaagttgtaattttggttcccgaagaaaaa-aattacaaaatcatcccctaagttttgca 8009937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 32295264 - 32295177
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagtttt 303  Q
    ||||||| |||||  |||||  ||||||| | |||||||||||||  |||  ||||||||| || |||||||||||| ||||||||||    
T  32295264 ttaataggagttttagcccctaaactttttcaaagttgcgattttgaccccctaagaaaaaaaattacaaaaccaccacctaagtttt 32295177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 2746 - 2862
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    |||| ||| |||||| |||||| ||| |||||||||||||||| || |||||||||  | |||||||||| |||||||||||  |||||||| |||| ||    
T  2746 tttttaggcttaataacagttttcgcaccctaacttttacgaatttacgattttagttctctaagaaaaaaaactacaaaactgccccctaaattttaca 2845  T
Q  307 actttagcagttttggc 323  Q
    ||| |||||||||||||    
T  2846 actgtagcagttttggc 2862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 9652 - 9537
Alignment:
Q  214 aggtttaatagcagtttccgccccctaacttttacgaagttgcgatttt--agccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    ||||||||||||||||| | || ||||||||| ||||||||||||||||    ||||||| ||||| |||||| ||| | |||||||||||||||||||     
T  9652 aggtttaatagcagttttcacctcctaactttcacgaagttgcgattttgatcccctaagaaaaaaaaactaccaaatcgccccctaagttttgcaactg 9553  T
Q  311 tagcagttttggcccc 326  Q
    |||||||||| |||||    
T  9552 tagcagttttagcccc 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 718 - 617
Alignment:
Q  221 atagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaag-aaaaagaactacaaaaccaccccctaagttttgcaactttagcagt 317  Q
    |||||||||| || | |||||||||||||||||||||||||| |  ||||||| ||||| |||||||||||| |||| |||||||||||| | |||||||    
T  718 atagcagttttcgtctcctaacttttacgaagttgcgattttggccccctaagaaaaaaaaactacaaaaccgccccttaagttttgcaattctagcagt 619  T
Q  318 tt 319  Q
    ||    
T  618 tt 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 405 - 516
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaa-ctacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||| ||  ||||||||||||   | ||||||||||||| ||||  ||||||||| || |||||||||||||||||||||||| ||  | | ||    
T  405 ttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttacatatgtggc 504  T
Q  315 agttttggcccc 326  Q
    ||||||||||||    
T  505 agttttggcccc 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 19043 - 19150
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagc--cctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||| ||||| |||||| ||||||| ||||||||| |||||  ||  ||||||||||| ||||||||||||  |||||||||||||||||  |||||    
T  19043 ttaatagtagttttcgccccttaactttcacgaagttgtgatttcggctccctaagaaaaa-aactacaaaaccgtcccctaagttttgcaaccgtagca 19141  T
Q  316 gttttggcc 324  Q
    | |||||||    
T  19142 gatttggcc 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 77123 - 77063
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| |||||||||| |  |||||||||||| ||||| |||||||||||||||    
T  77123 ccctaagaaaaaaaactacaaaatcgtcccctaagttttacaactgtagcagttttggccc 77063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 4263 - 4220
Alignment:
Q  278 aactacaaaaccaccccctaagttttgcaactttagcagttttg 321  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  4263 aactacaaaaccgccccctaagttttgcaactgtagcagttttg 4220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 19917 - 20026
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc-taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcag 316  Q
    |||||||||||||   |||||||| ||||   |||||| |||||| |||| ||||||||| |||||||||| |  || |||||||||||| || | ||||    
T  19917 ttaatagcagttttaaccccctaaattttttaaagttgtgattttggcccctaagaaaaaaaactacaaaatcgtccactaagttttgcatctgtggcag 20016  T
Q  317 ttttggcccc 326  Q
    ||||||||||    
T  20017 ttttggcccc 20026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 1474 - 1545
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaa 287  Q
    |||||||||||||  ||||||||||||| || |||||| |||||| |  |||||||||||| ||||||||||    
T  1474 ttaatagcagttttagccccctaactttcacaaagttgagattttggccccctaagaaaaaaaactacaaaa 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 3642 - 3713
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaa 287  Q
    |||||||||||||  |||||||||||||  | ||||||||||||| |  |||||||||||| ||||||||||    
T  3642 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaa 3713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 9414 - 9504
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct--aagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||||||  ||||||||| |||  | |||||| |||||| |||||  |||||||| ||||||||||||  |||||||||||||||    
T  9414 tttaatagcagttttagccccctaattttcccaaagttgtgatttttgccctctaagaaaaa-aactacaaaaccgtcccctaagttttgca 9504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 314
Target Start/End: Complemental strand, 9711 - 9634
Alignment:
Q  236 ccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagc 314  Q
    |||||||||| ||||||||| |||| | |||| |  ||||| |||||||||||| |||| |||||||||||||| ||||    
T  9711 ccctaactttcacgaagttgtgattctggccccataaaaaa-aactacaaaaccgccccttaagttttgcaactgtagc 9634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 3642 - 3713
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttag--ccctaagaaaaagaactacaaaa 287  Q
    |||||||||||||  |||||||||||||  | ||||||||||||| |  |||||||||||| ||||||||||    
T  3642 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaa 3713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 94064 - 94004
Alignment:
Q  265 ccctaagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    |||||||||||| ||||||||||||  ||| ||||||||| |||| ||||||||| |||||    
T  94064 ccctaagaaaaaaaactacaaaaccgtcccataagttttgtaactgtagcagtttaggccc 94004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 2013 - 2072
Alignment:
Q  209 ttttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccct 268  Q
    ||||||||||||||||||||||   |||||||||| | | |||||||| |||||||||||    
T  2013 ttttaaggtttaatagcagttttgaccccctaactatcaagaagttgcaattttagccct 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 145373 - 145466
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggcccc 326  Q
    |||||||||||  | |||||||||||||  |||  ||||||||| ||||||||| || |||| ||| ||||||| || | ||||||||||||||    
T  145373 cccctaactttctcaaagttgcgattttgcccccctaagaaaaaaaactacaaagccgccccttaaattttgcatctgtggcagttttggcccc 145466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 24895 - 24940
Alignment:
Q  217 tttaatagcagtttccgccccctaacttttacgaagttgcgatttt 262  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||    
T  24895 tttagtagcagttttcgtcccctaacttttacgaagttacgatttt 24940  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 9551 - 9663
Alignment:
Q  211 ttaaggtttaatagcagtttccgccccctaacttttacgaagttgcgattttagccctaagaaaaagaactacaaaaccaccccctaagttttgcaactt 310  Q
    ||||| |||||||| |||||  ||||| |||||||| | |||||| |||||| ||||    |||||   |||||||| | |||| ||||||||||||||     
T  9551 ttaagatttaatagtagttttagccccttaacttttccaaagttgtgattttggccccctaaaaaa---ctacaaaatcgccccttaagttttgcaactg 9647  T
Q  311 tagcagttttggcccc 326  Q
    ||| ||||||||||||    
T  9648 tagtagttttggcccc 9663  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 203247 - 203300
Alignment:
Q  272 aaaaagaactacaaaaccaccccctaagttttgcaactttagcagttttggccc 325  Q
    ||||| |||||||||||| || ||||| |||||||||| ||| |||||||||||    
T  203247 aaaaaaaactacaaaaccgcctcctaaattttgcaactgtagaagttttggccc 203300  T

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Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 203468 - 203397
Alignment:
Q  235 cccctaacttttacgaagttgcgattttagc-cctaagaaaaagaactacaaaaccaccccctaagttttgca 306  Q
    ||||||||||| ||||| ||||||||||| | ||||||||||| |  ||||||| || |||||||||||||||    
T  203468 cccctaactttcacgaaattgcgattttacctcctaagaaaaaaatttacaaaatca-cccctaagttttgca 203397  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 21968 - 21861
Alignment:
Q  218 ttaatagcagtttccgccccctaacttttacgaagttgcgattttagccc--taagaaaaagaactacaaaaccaccccctaagttttgcaactttagca 315  Q
    ||||||||||||| || ||||||||||||| |  ||||||||||| ||||  |||| |||| || |||||||||   || |||||||| ||||| ||  |    
T  21968 ttaatagcagttttcgtcccctaacttttatgctgttgcgattttggccccttaagtaaaaaaattacaaaaccgttccataagttttacaactgtatta 21869  T
Q  316 gttttggc 323  Q
    ||||||||    
T  21868 gttttggc 21861  T

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