View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2888_high_7 (Length: 319)
Name: NF2888_high_7
Description: NF2888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2888_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 32 - 307
Target Start/End: Complemental strand, 49437539 - 49437264
Alignment:
| Q |
32 |
ggtttataaatttgttgaatccatttatcatacttcaattaaatttgttgaccttgtgtatgactttatccatttgttagaggtaaaacaaaggggatga |
131 |
Q |
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| T |
49437539 |
ggtttataaatttgttgaatccatttatcatacttcaattaaatttgttgaccttgtgtatgactttatccatttgttagaggtaaaacaaaggggatga |
49437440 |
T |
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| Q |
132 |
tcatgtatagtcttaggatcatttataaactacacatatgcaactttgaattctatctcaataagatcttccatttgaaagatccttatgttttaaaata |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
49437439 |
tcatgtatagtcttaggatcatttataaactacacatatgcaactttgaattctatctcaataagatcttccatttgaaagatctttatgttttaaaata |
49437340 |
T |
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| Q |
232 |
gttttttagccttggttagctcatcggtccacagctctgttttttgagtacaagtaaatacactctatattcttcg |
307 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |
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| T |
49437339 |
gttttttacccttggttagctcatcggtccacagctctgttttttgagttcaagaaaatacactctatattgttcg |
49437264 |
T |
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