View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2888_low_5 (Length: 368)
Name: NF2888_low_5
Description: NF2888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2888_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 85 - 352
Target Start/End: Original strand, 39978969 - 39979236
Alignment:
| Q |
85 |
aaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcac |
184 |
Q |
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| T |
39978969 |
aaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctggtccttcaaaccagcatcagttggtacatttcttgcac |
39979068 |
T |
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| Q |
185 |
ttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactc |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979069 |
ttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctcccacttactaggaatatgtataataactgcactcactc |
39979168 |
T |
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| Q |
285 |
tcgctctccctttgtgtcttaacctgagtacttgtgtggcaaagtgtgtttggggagtatctttttat |
352 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979169 |
tcactctccctttgtgtcttaacctgagtacttgtgtggcaaagtgtgtttggggagtatctttttat |
39979236 |
T |
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