View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2889_low_6 (Length: 448)

Name: NF2889_low_6
Description: NF2889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2889_low_6
NF2889_low_6
[»] chr8 (57 HSPs)
chr8 (1-84)||(31623924-31624007)
chr8 (1-90)||(38591016-38591105)
chr8 (1-100)||(31625383-31625482)
chr8 (1-101)||(36756082-36756182)
chr8 (1-90)||(36070196-36070285)
chr8 (1-84)||(14820211-14820294)
chr8 (1-100)||(36940032-36940131)
chr8 (1-96)||(37472421-37472516)
chr8 (1-84)||(38589839-38589921)
chr8 (1-101)||(117066-117166)
chr8 (1-101)||(27750619-27750719)
chr8 (1-101)||(37274905-37275005)
chr8 (4-68)||(44606160-44606224)
chr8 (1-64)||(24068348-24068411)
chr8 (1-98)||(24069447-24069544)
chr8 (1-66)||(29739676-29739741)
chr8 (1-90)||(43275768-43275857)
chr8 (1-90)||(43277930-43278019)
chr8 (1-89)||(4807384-4807472)
chr8 (1-101)||(7486095-7486195)
chr8 (1-101)||(13367048-13367148)
chr8 (1-101)||(45385792-45385892)
chr8 (1-64)||(19913510-19913573)
chr8 (1-64)||(43386737-43386800)
chr8 (1-101)||(35943925-35944026)
chr8 (1-66)||(41866912-41866977)
chr8 (1-66)||(41867949-41868014)
chr8 (1-101)||(16363810-16363910)
chr8 (1-68)||(19914937-19915004)
chr8 (1-68)||(37323366-37323433)
chr8 (1-68)||(37324719-37324786)
chr8 (1-59)||(21267182-21267240)
chr8 (1-59)||(37474076-37474134)
chr8 (1-101)||(1570204-1570304)
chr8 (1-101)||(3237436-3237535)
chr8 (25-101)||(8095388-8095464)
chr8 (1-77)||(10053766-10053842)
chr8 (1-101)||(39546675-39546775)
chr8 (1-68)||(37276274-37276341)
chr8 (1-64)||(39515217-39515280)
chr8 (1-101)||(38003-38103)
chr8 (1-60)||(39242-39301)
chr8 (1-60)||(6843773-6843832)
chr8 (1-64)||(36071413-36071476)
chr8 (1-90)||(4810133-4810221)
chr8 (1-90)||(35945446-35945535)
chr8 (1-66)||(36734577-36734642)
chr8 (1-77)||(7770919-7770995)
chr8 (1-60)||(6844612-6844671)
chr8 (1-60)||(7561817-7561876)
chr8 (1-60)||(8502313-8502372)
chr8 (1-60)||(10052122-10052181)
chr8 (1-60)||(14433640-14433699)
chr8 (33-96)||(20308655-20308718)
chr8 (33-96)||(21095288-21095351)
chr8 (33-68)||(34616179-34616214)
chr8 (1-60)||(41178709-41178768)
[»] chr1 (64 HSPs)
chr1 (1-90)||(25785986-25786075)
chr1 (1-99)||(13930675-13930773)
chr1 (1-101)||(25787162-25787262)
chr1 (1-101)||(26056145-26056245)
chr1 (1-100)||(13641275-13641374)
chr1 (2-91)||(26054916-26055005)
chr1 (1-101)||(47136685-47136785)
chr1 (1-101)||(47411002-47411102)
chr1 (1-99)||(14071203-14071301)
chr1 (1-101)||(16218476-16218576)
chr1 (1-84)||(47411463-47411546)
chr1 (11-100)||(9592266-9592355)
chr1 (1-101)||(3979311-3979411)
chr1 (1-101)||(16217458-16217558)
chr1 (1-68)||(13929313-13929380)
chr1 (1-84)||(21277012-21277095)
chr1 (1-100)||(52181304-52181403)
chr1 (3-80)||(42248324-42248401)
chr1 (1-74)||(48467279-48467352)
chr1 (25-101)||(36511329-36511405)
chr1 (1-100)||(3978062-3978161)
chr1 (1-68)||(49139819-49139886)
chr1 (1-57)||(9633793-9633849)
chr1 (33-101)||(14169669-14169737)
chr1 (33-89)||(19466215-19466271)
chr1 (25-89)||(36509853-36509917)
chr1 (1-101)||(50679819-50679919)
chr1 (5-101)||(52742974-52743070)
chr1 (1-60)||(2236831-2236890)
chr1 (1-60)||(35683073-35683132)
chr1 (1-60)||(48934259-48934318)
chr1 (1-60)||(48935149-48935208)
chr1 (1-46)||(44977239-44977284)
chr1 (1-101)||(14390276-14390376)
chr1 (2-90)||(19464619-19464707)
chr1 (1-61)||(34653453-34653513)
chr1 (1-60)||(2238017-2238076)
chr1 (1-60)||(25035376-25035435)
chr1 (1-60)||(25040589-25040648)
chr1 (1-60)||(38458104-38458163)
chr1 (5-100)||(47560161-47560256)
chr1 (33-84)||(51726859-51726910)
chr1 (1-59)||(9119820-9119878)
chr1 (1-51)||(33793797-33793847)
chr1 (1-59)||(43190538-43190596)
chr1 (1-58)||(1061493-1061550)
chr1 (1-58)||(51424269-51424326)
chr1 (1-101)||(2973006-2973106)
chr1 (1-101)||(13642555-13642655)
chr1 (1-101)||(20953306-20953406)
chr1 (1-56)||(9123442-9123497)
chr1 (1-60)||(14312793-14312852)
chr1 (1-60)||(29264889-29264948)
chr1 (1-64)||(32823576-32823639)
chr1 (25-60)||(34532741-34532776)
chr1 (1-60)||(48973216-48973275)
chr1 (1-60)||(48974445-48974504)
chr1 (1-64)||(49141531-49141594)
chr1 (27-89)||(22167823-22167885)
chr1 (1-59)||(44979453-44979511)
chr1 (27-64)||(2971743-2971780)
chr1 (25-66)||(14765127-14765168)
chr1 (1-58)||(34531681-34531738)
chr1 (28-84)||(14171283-14171339)
[»] chr7 (76 HSPs)
chr7 (1-101)||(19279610-19279710)
chr7 (1-100)||(22744764-22744863)
chr7 (5-83)||(46673512-46673589)
chr7 (3-84)||(43007664-43007745)
chr7 (1-101)||(22061793-22061893)
chr7 (1-101)||(22746318-22746418)
chr7 (1-101)||(43006403-43006503)
chr7 (1-100)||(46674933-46675032)
chr7 (6-68)||(40930441-40930503)
chr7 (1-81)||(7148076-7148156)
chr7 (1-101)||(14206691-14206791)
chr7 (1-101)||(14215381-14215481)
chr7 (1-68)||(25153676-25153743)
chr7 (1-68)||(46457088-46457155)
chr7 (1-66)||(40926552-40926617)
chr7 (2-90)||(7146799-7146886)
chr7 (1-84)||(4858359-4858442)
chr7 (2-101)||(33459541-33459640)
chr7 (1-100)||(38406036-38406135)
chr7 (1-84)||(43935203-43935286)
chr7 (1-99)||(24873597-24873695)
chr7 (1-66)||(18801233-18801298)
chr7 (1-90)||(19278371-19278460)
chr7 (1-66)||(19848867-19848932)
chr7 (1-90)||(43930337-43930426)
chr7 (1-81)||(4857219-4857299)
chr7 (1-101)||(22060481-22060581)
chr7 (1-101)||(43936138-43936238)
chr7 (8-68)||(46458744-46458804)
chr7 (1-64)||(17288255-17288318)
chr7 (1-64)||(45721801-45721864)
chr7 (1-66)||(1970831-1970896)
chr7 (1-66)||(18802422-18802487)
chr7 (9-90)||(35127836-35127917)
chr7 (1-60)||(21171525-21171584)
chr7 (1-68)||(25154967-25155034)
chr7 (1-68)||(25532164-25532230)
chr7 (1-64)||(28325090-28325153)
chr7 (1-64)||(41516379-41516442)
chr7 (1-60)||(41616642-41616701)
chr7 (2-101)||(48754015-48754114)
chr7 (1-101)||(13446656-13446756)
chr7 (1-77)||(14107850-14107926)
chr7 (1-77)||(14417807-14417883)
chr7 (33-101)||(27899212-27899280)
chr7 (1-97)||(36702795-36702891)
chr7 (1-100)||(36702949-36703049)
chr7 (1-101)||(47163171-47163271)
chr7 (1-101)||(48672773-48672873)
chr7 (1-60)||(1904059-1904118)
chr7 (1-60)||(17287092-17287151)
chr7 (1-60)||(21171313-21171372)
chr7 (1-60)||(30224015-30224074)
chr7 (1-60)||(34557415-34557474)
chr7 (1-60)||(34558340-34558399)
chr7 (1-60)||(38001522-38001581)
chr7 (1-60)||(41126257-41126316)
chr7 (1-64)||(41515015-41515077)
chr7 (1-59)||(41127211-41127269)
chr7 (1-59)||(41618539-41618597)
chr7 (1-101)||(10257386-10257484)
chr7 (1-90)||(43931875-43931964)
chr7 (1-66)||(45089490-45089554)
chr7 (1-94)||(45719633-45719726)
chr7 (1-53)||(33458328-33458380)
chr7 (46-90)||(35128200-35128244)
chr7 (1-60)||(1903848-1903907)
chr7 (37-80)||(7347239-7347282)
chr7 (1-60)||(30222664-30222723)
chr7 (1-60)||(36673875-36673934)
chr7 (1-60)||(38002553-38002612)
chr7 (1-60)||(38408313-38408372)
chr7 (1-64)||(47809621-47809684)
chr7 (1-84)||(48671096-48671178)
chr7 (16-58)||(35483607-35483649)
chr7 (19-63)||(41985951-41985995)
[»] chr6 (30 HSPs)
chr6 (1-90)||(5311297-5311386)
chr6 (1-100)||(22299902-22300001)
chr6 (1-101)||(8412314-8412414)
chr6 (1-101)||(31738381-31738481)
chr6 (1-100)||(8411104-8411203)
chr6 (1-99)||(31740272-31740370)
chr6 (1-100)||(9927624-9927722)
chr6 (1-68)||(33802048-33802115)
chr6 (1-66)||(33807707-33807772)
chr6 (1-60)||(8447239-8447298)
chr6 (1-60)||(8456043-8456102)
chr6 (1-100)||(27438808-27438907)
chr6 (9-99)||(293640-293730)
chr6 (1-80)||(34084153-34084230)
chr6 (1-60)||(18773672-18773731)
chr6 (1-60)||(19367735-19367794)
chr6 (1-100)||(27440174-27440273)
chr6 (1-60)||(28225442-28225501)
chr6 (1-60)||(28226457-28226516)
chr6 (1-58)||(13173055-13173112)
chr6 (1-58)||(19368559-19368616)
chr6 (1-101)||(22298622-22298722)
chr6 (1-77)||(26581971-26582047)
chr6 (1-57)||(26584079-26584135)
chr6 (1-60)||(2138676-2138735)
chr6 (127-199)||(9754227-9754300)
chr6 (48-100)||(14326218-14326270)
chr6 (28-100)||(14328773-14328845)
chr6 (48-100)||(14419228-14419280)
chr6 (28-100)||(14421783-14421855)
[»] chr4 (84 HSPs)
chr4 (1-101)||(33377362-33377462)
chr4 (1-100)||(37560298-37560397)
chr4 (1-101)||(1273431-1273530)
chr4 (9-101)||(5688635-5688727)
chr4 (1-101)||(37559016-37559116)
chr4 (1-84)||(33376236-33376319)
chr4 (2-101)||(35787815-35787914)
chr4 (1-90)||(55953861-55953950)
chr4 (1-101)||(44128332-44128432)
chr4 (1-90)||(55952843-55952932)
chr4 (2-90)||(10403298-10403386)
chr4 (1-101)||(46796024-46796124)
chr4 (1-101)||(53400203-53400303)
chr4 (1-68)||(44305010-44305077)
chr4 (1-99)||(21104310-21104408)
chr4 (1-99)||(28103486-28103584)
chr4 (1-99)||(31711110-31711208)
chr4 (1-101)||(11113760-11113860)
chr4 (1-101)||(11114978-11115078)
chr4 (1-101)||(15446668-15446768)
chr4 (25-101)||(34439658-34439734)
chr4 (25-101)||(38417595-38417671)
chr4 (1-60)||(306595-306654)
chr4 (25-100)||(5687217-5687292)
chr4 (1-64)||(15787537-15787600)
chr4 (1-68)||(27408781-27408848)
chr4 (1-68)||(30683058-30683125)
chr4 (1-64)||(43894123-43894186)
chr4 (1-60)||(46794858-46794917)
chr4 (1-96)||(56000305-56000400)
chr4 (1-101)||(86821-86921)
chr4 (33-101)||(17319092-17319160)
chr4 (1-101)||(38370300-38370400)
chr4 (1-60)||(12396913-12396972)
chr4 (1-64)||(15786970-15787033)
chr4 (1-60)||(39590959-39591018)
chr4 (1-101)||(44126614-44126716)
chr4 (1-68)||(52658929-52658996)
chr4 (1-99)||(29663661-29663758)
chr4 (27-89)||(34438450-34438512)
chr4 (1-51)||(35789638-35789688)
chr4 (1-58)||(15445454-15445511)
chr4 (1-66)||(28370674-28370739)
chr4 (1-101)||(3217607-3217707)
chr4 (1-101)||(26788540-26788640)
chr4 (1-77)||(29686274-29686350)
chr4 (1-101)||(50531754-50531854)
chr4 (1-60)||(6616250-6616309)
chr4 (1-60)||(19049911-19049970)
chr4 (1-60)||(23752034-23752093)
chr4 (37-84)||(26121924-26121971)
chr4 (1-64)||(26376347-26376410)
chr4 (1-68)||(30682738-30682805)
chr4 (1-64)||(40143672-40143735)
chr4 (1-64)||(40146658-40146721)
chr4 (1-60)||(47668636-47668695)
chr4 (1-64)||(56001303-56001366)
chr4 (1-66)||(11094544-11094609)
chr4 (1-58)||(38555317-38555374)
chr4 (1-58)||(48207758-48207815)
chr4 (1-77)||(29833390-29833466)
chr4 (1-60)||(96720-96779)
chr4 (1-60)||(526758-526817)
chr4 (1-60)||(937137-937196)
chr4 (1-60)||(2310821-2310880)
chr4 (1-60)||(8510873-8510932)
chr4 (1-60)||(8516891-8516950)
chr4 (1-68)||(10403448-10403514)
chr4 (1-64)||(26202421-26202484)
chr4 (33-80)||(26393146-26393193)
chr4 (1-60)||(26428674-26428733)
chr4 (1-60)||(26428884-26428943)
chr4 (1-60)||(30672103-30672162)
chr4 (1-60)||(39135549-39135608)
chr4 (1-64)||(47667197-47667259)
chr4 (1-59)||(52880831-52880890)
chr4 (1-60)||(52981189-52981248)
chr4 (1-59)||(39592329-39592387)
chr4 (48-101)||(6140358-6140411)
chr4 (3-64)||(28189332-28189393)
chr4 (1-66)||(30441627-30441692)
chr4 (1-54)||(30671012-30671065)
chr4 (1-66)||(53177051-53177116)
chr4 (1-101)||(48206178-48206278)
[»] chr3 (71 HSPs)
chr3 (1-101)||(42632724-42632824)
chr3 (1-101)||(51825619-51825719)
chr3 (1-100)||(41386148-41386247)
chr3 (1-90)||(42633895-42633984)
chr3 (1-90)||(53808336-53808425)
chr3 (1-101)||(41387431-41387531)
chr3 (1-101)||(54653964-54654064)
chr3 (1-68)||(51401382-51401449)
chr3 (1-67)||(8372648-8372714)
chr3 (1-66)||(10987686-10987751)
chr3 (1-90)||(11220667-11220756)
chr3 (1-101)||(7820408-7820508)
chr3 (1-101)||(32980450-32980550)
chr3 (1-84)||(13077966-13078049)
chr3 (1-60)||(39133035-39133094)
chr3 (4-101)||(29536735-29536832)
chr3 (1-101)||(8371238-8371338)
chr3 (1-101)||(11219448-11219548)
chr3 (1-60)||(17350141-17350200)
chr3 (1-84)||(43101912-43101995)
chr3 (1-100)||(47808105-47808204)
chr3 (1-100)||(47855337-47855436)
chr3 (1-99)||(49122002-49122100)
chr3 (2-99)||(19253002-19253099)
chr3 (1-90)||(54752634-54752723)
chr3 (1-68)||(19622023-19622090)
chr3 (1-64)||(26798941-26799004)
chr3 (1-64)||(47766986-47767048)
chr3 (6-84)||(10986675-10986753)
chr3 (1-90)||(25583132-25583221)
chr3 (1-90)||(36626749-36626838)
chr3 (1-66)||(51400233-51400298)
chr3 (1-77)||(39288461-39288537)
chr3 (1-60)||(32973157-32973216)
chr3 (1-60)||(32974262-32974321)
chr3 (26-101)||(43345362-43345437)
chr3 (1-60)||(48035363-48035422)
chr3 (1-64)||(48252951-48253014)
chr3 (1-60)||(53047915-53047974)
chr3 (15-101)||(2124061-2124147)
chr3 (1-59)||(52293563-52293621)
chr3 (1-59)||(53342734-53342792)
chr3 (1-58)||(2225065-2225122)
chr3 (3-60)||(52705347-52705404)
chr3 (1-101)||(25585831-25585931)
chr3 (1-60)||(5416216-5416275)
chr3 (1-68)||(17345329-17345396)
chr3 (1-60)||(19579333-19579392)
chr3 (1-100)||(35174381-35174480)
chr3 (1-60)||(39287488-39287547)
chr3 (1-68)||(47806836-47806903)
chr3 (1-60)||(52292612-52292671)
chr3 (1-60)||(53049076-53049135)
chr3 (1-60)||(55443589-55443648)
chr3 (1-55)||(33563967-33564021)
chr3 (1-58)||(7583488-7583545)
chr3 (1-58)||(38639036-38639093)
chr3 (1-101)||(12062382-12062482)
chr3 (25-101)||(23559861-23559937)
chr3 (1-60)||(5417087-5417146)
chr3 (1-60)||(19622958-19623017)
chr3 (28-95)||(35173192-35173259)
chr3 (1-64)||(51214201-51214264)
chr3 (1-59)||(19579238-19579296)
chr3 (33-98)||(21127975-21128040)
chr3 (25-66)||(32979130-32979171)
chr3 (1-54)||(40502260-40502313)
chr3 (1-62)||(48867467-48867528)
chr3 (1-53)||(42570030-42570082)
chr3 (1-101)||(43103294-43103394)
chr3 (4-84)||(49334352-49334432)
[»] scaffold2127 (1 HSPs)
scaffold2127 (1-101)||(513-613)
[»] chr2 (62 HSPs)
chr2 (2-101)||(2581822-2581921)
chr2 (1-101)||(12852904-12853004)
chr2 (1-99)||(7036984-7037082)
chr2 (1-90)||(6706944-6707033)
chr2 (1-66)||(12958434-12958499)
chr2 (1-101)||(23177691-23177792)
chr2 (1-101)||(23588948-23589049)
chr2 (1-66)||(37867774-37867839)
chr2 (1-101)||(15650459-15650559)
chr2 (5-101)||(21012078-21012174)
chr2 (1-101)||(23178880-23178980)
chr2 (1-101)||(23590137-23590237)
chr2 (1-101)||(42028956-42029056)
chr2 (1-64)||(35799530-35799593)
chr2 (2-68)||(2583577-2583643)
chr2 (1-99)||(37869040-37869138)
chr2 (1-90)||(4829483-4829572)
chr2 (1-101)||(6209063-6209162)
chr2 (1-65)||(11386642-11386706)
chr2 (1-101)||(42246609-42246709)
chr2 (1-100)||(1624975-1625073)
chr2 (1-64)||(7038367-7038430)
chr2 (1-68)||(12854135-12854202)
chr2 (25-100)||(14509251-14509326)
chr2 (1-60)||(29424651-29424710)
chr2 (1-64)||(42368343-42368406)
chr2 (1-58)||(3255919-3255976)
chr2 (1-66)||(10368418-10368483)
chr2 (1-62)||(41795989-41796050)
chr2 (1-101)||(42027211-42027311)
chr2 (1-60)||(2305558-2305617)
chr2 (1-60)||(22653066-22653125)
chr2 (1-54)||(11575500-11575553)
chr2 (1-58)||(33836787-33836844)
chr2 (25-101)||(3533624-3533700)
chr2 (1-60)||(3665242-3665301)
chr2 (1-60)||(3666307-3666366)
chr2 (1-68)||(12959736-12959803)
chr2 (1-60)||(17179290-17179349)
chr2 (1-64)||(28109904-28109967)
chr2 (1-60)||(30202922-30202981)
chr2 (42-101)||(40174762-40174821)
chr2 (1-58)||(4630125-4630182)
chr2 (5-58)||(22900216-22900269)
chr2 (37-101)||(7490193-7490257)
chr2 (16-80)||(32614418-32614482)
chr2 (1-60)||(5564077-5564136)
chr2 (1-60)||(5565184-5565243)
chr2 (1-64)||(10367257-10367320)
chr2 (1-60)||(17179078-17179137)
chr2 (1-60)||(20948420-20948479)
chr2 (1-64)||(27264608-27264671)
chr2 (1-60)||(30202711-30202770)
chr2 (1-64)||(43015557-43015620)
chr2 (1-59)||(2306701-2306758)
chr2 (2-60)||(38801237-38801295)
chr2 (1-58)||(10477360-10477417)
chr2 (1-46)||(14573861-14573906)
chr2 (215-268)||(15268931-15268984)
chr2 (1-77)||(3528287-3528363)
chr2 (127-218)||(15268517-15268609)
chr2 (28-60)||(35801084-35801116)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-101)||(2263-2363)
scaffold0178 (1-58)||(1230-1286)
[»] chr5 (65 HSPs)
chr5 (1-80)||(18677994-18678073)
chr5 (1-92)||(26403325-26403416)
chr5 (1-99)||(12936102-12936200)
chr5 (1-94)||(27894028-27894121)
chr5 (1-101)||(5382960-5383060)
chr5 (1-68)||(19827171-19827238)
chr5 (1-99)||(12950260-12950358)
chr5 (1-99)||(19525288-19525386)
chr5 (1-101)||(5384344-5384444)
chr5 (25-101)||(15857616-15857692)
chr5 (1-100)||(15613523-15613622)
chr5 (1-99)||(12947930-12948028)
chr5 (1-99)||(19524001-19524098)
chr5 (6-99)||(42979471-42979564)
chr5 (1-100)||(1663205-1663304)
chr5 (1-84)||(8762415-8762498)
chr5 (1-68)||(21387655-21387722)
chr5 (1-99)||(12933769-12933867)
chr5 (1-66)||(7345423-7345488)
chr5 (5-90)||(15614969-15615054)
chr5 (1-90)||(26404219-26404308)
chr5 (16-89)||(42510147-42510220)
chr5 (1-101)||(10085843-10085943)
chr5 (32-100)||(38473554-38473622)
chr5 (1-101)||(40058036-40058136)
chr5 (1-64)||(224625-224688)
chr5 (1-68)||(326362-326429)
chr5 (1-68)||(1273107-1273174)
chr5 (1-60)||(4568013-4568072)
chr5 (1-60)||(19050767-19050826)
chr5 (1-60)||(22650667-22650726)
chr5 (1-101)||(18695645-18695745)
chr5 (1-64)||(223243-223307)
chr5 (1-101)||(32734150-32734249)
chr5 (1-89)||(38471307-38471395)
chr5 (1-56)||(1273383-1273438)
chr5 (1-60)||(5061046-5061105)
chr5 (1-60)||(15509213-15509272)
chr5 (1-60)||(15510302-15510361)
chr5 (1-64)||(40059363-40059426)
chr5 (1-51)||(6629749-6629799)
chr5 (3-60)||(641919-641976)
chr5 (1-58)||(15154108-15154165)
chr5 (1-90)||(22819558-22819647)
chr5 (1-42)||(41905193-41905234)
chr5 (1-41)||(328212-328252)
chr5 (1-77)||(18693716-18693792)
chr5 (1-60)||(4566969-4567028)
chr5 (1-60)||(5062225-5062284)
chr5 (1-64)||(5975774-5975837)
chr5 (1-60)||(19050978-19051037)
chr5 (1-60)||(20991688-20991747)
chr5 (1-60)||(32411982-32412041)
chr5 (1-60)||(32521961-32522020)
chr5 (1-64)||(37371075-37371138)
chr5 (1-64)||(37371218-37371281)
chr5 (1-100)||(42980708-42980807)
chr5 (41-91)||(2167522-2167572)
chr5 (1-55)||(32521704-32521758)
chr5 (1-38)||(19825892-19825929)
chr5 (1-54)||(20988708-20988761)
chr5 (1-101)||(21389141-21389239)
chr5 (1-90)||(22812396-22812485)
chr5 (215-259)||(36206932-36206976)
chr5 (16-68)||(42511697-42511749)
[»] scaffold1974 (1 HSPs)
scaffold1974 (1-101)||(626-726)
[»] scaffold1878 (1 HSPs)
scaffold1878 (1-101)||(548-648)
[»] scaffold0290 (2 HSPs)
scaffold0290 (1-101)||(9476-9576)
scaffold0290 (1-101)||(8397-8497)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-68)||(39932-39999)
scaffold0051 (32-100)||(22176-22244)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-64)||(23424-23487)
scaffold0046 (1-60)||(24854-24913)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-100)||(77180-77279)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-100)||(145868-145967)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-64)||(13239-13302)
scaffold0084 (1-60)||(11724-11783)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-68)||(96178-96245)
scaffold0013 (1-59)||(96855-96913)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-81)||(56718-56798)
scaffold0025 (1-68)||(54609-54676)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-100)||(48455-48554)
scaffold0003 (1-100)||(47088-47187)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-89)||(12928-13016)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-60)||(1773-1832)
[»] scaffold0038 (2 HSPs)
scaffold0038 (1-60)||(25940-25999)
scaffold0038 (1-60)||(26955-27014)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-58)||(5187-5244)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-46)||(73039-73084)
[»] scaffold0098 (1 HSPs)
scaffold0098 (28-90)||(42355-42417)


Alignment Details
Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31623924 - 31624007
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  31623924 ttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattatt 31624007  T

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Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38591105 - 38591016
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||||    
T  38591105 ttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttggtc 38591016  T

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Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31625482 - 31625383
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  31625482 ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 31625383  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36756082 - 36756182
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| | |||||||    
T  36756082 ttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttggtcatctccgtta 36756181  T
Q  101 g 101  Q
    |    
T  36756182 g 36756182  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36070196 - 36070285
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||  || ||||||||||| |||||    
T  36070196 ttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtc 36070285  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14820211 - 14820294
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  14820211 ttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttattatt 14820294  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36940131 - 36940032
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||  |||||||||  || ||||||||||| ||||| | |||||||    
T  36940131 ttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggtcatctccgtta 36940032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37472421 - 37472516
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttcc 96  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| |||  |||||||||| ||| ||||| |||||    
T  37472421 ttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtcctttcc 37472516  T

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Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38589839 - 38589921
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  38589839 ttaacttatttttg-ttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactatt 38589921  T

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Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 117066 - 117166
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||||||  ||||||||| | || ||||| | |||||||    
T  117066 ttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtta 117165  T
Q  101 g 101  Q
    |    
T  117166 g 117166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27750719 - 27750619
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| || |||  ||| |||||||| | ||||||||||||||||||||| || | |||||||||| ||||||| |||||||    
T  27750719 ttaacttatttttggttttcaatttgatccgttaattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T
Q  101 g 101  Q
    |    
T  27750619 g 27750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37274905 - 37275005
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||| ||||||||||||  || ||||||||||| ||||| | |||||||    
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  101 g 101  Q
    |    
T  37275005 g 37275005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 44606160 - 44606224
Alignment:
Q  4 acttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  44606160 acttatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatct 44606224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24068348 - 24068411
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  24068348 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 24068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24069544 - 24069447
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgt 98  Q
    ||||||||||||||||||||| | || |||| |||||||||||||| ||||||||||||||||| |||  || ||||||| ||| ||||| |||||||    
T  24069544 ttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgt 24069447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29739741 - 29739676
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||| |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  29739741 ttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaat 29739676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43275768 - 43275857
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||| ||||||||| ||| ||| |||||| |||| |||||    
T  43275768 ttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtttattattttggtc 43275857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43278019 - 43277930
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||  |||| ||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||| ||||||||||| |||||    
T  43278019 ttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtc 43277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4807384 - 4807472
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    |||||||||||||| |||| ||| ||||||||||||||||| || ||||||||||||||||||||||| | | |||||| |||| ||||    
T  4807384 ttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtttattattttggt 4807472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7486095 - 7486195
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||||| | || |||| ||||||||||||| ||||||||||||||||||||||  ||  |||||||||| ||||| | |||||||    
T  7486095 ttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgtta 7486194  T
Q  101 g 101  Q
    |    
T  7486195 g 7486195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13367148 - 13367048
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   |||||| | ||||||| |||||||||||||||| |||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  13367148 ttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 13367049  T
Q  101 g 101  Q
    |    
T  13367048 g 13367048  T

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Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45385892 - 45385792
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||| ||| |||||||| ||||||||||| ||| | ||| | |||||||    
T  45385892 ttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctccgtta 45385793  T
Q  101 g 101  Q
    |    
T  45385792 g 45385792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19913510 - 19913573
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  19913510 ttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataa 19913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43386800 - 43386737
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||    
T  43386800 ttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 43386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35943925 - 35944026
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaag-tgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||| | ||||||| ||| ||||||  ||| ||||||||||||||||||||| |||  |||||||||| ||||| | ||||||    
T  35943925 ttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgtt 35944024  T
Q  100 ag 101  Q
    ||    
T  35944025 ag 35944026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41866912 - 41866977
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||||||||||||| |||||| | || |||| ||||||||||||||||||||||||||||||||||    
T  41866912 ttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaat 41866977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41868014 - 41867949
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  41868014 ttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaat 41867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16363910 - 16363810
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| | |||||||| |||||||||||   ||  |||||||||| ||||| | |||||||    
T  16363910 ttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgtta 16363811  T
Q  101 g 101  Q
    |    
T  16363810 g 16363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19915004 - 19914937
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||  |||||||||||    
T  19915004 ttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatct 19914937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37323366 - 37323433
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||| |||||||||||||||||| |||| ||||||||||||| ||| |||||||| ||||||||||||    
T  37323366 ttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatct 37323433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37324786 - 37324719
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| || ||||||    
T  37324786 ttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatct 37324719  T

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Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21267182 - 21267240
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||    
T  21267182 ttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtcc 21267240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37474134 - 37474076
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  37474134 ttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcc 37474076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1570304 - 1570204
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  |||||||| ||||| | |||||||||||||| |||||||||||   ||||| | ||| ||||||||||| ||||| | |||||||    
T  1570304 ttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgtta 1570205  T
Q  101 g 101  Q
    |    
T  1570204 g 1570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3237436 - 3237535
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||||||||| |||| ||| ||||||||||||||||||| |  || ||||||| ||| || || |||||||||    
T  3237436 ttaacttatttttggatttcatt-tggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatcatttccgtta 3237534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 8095388 - 8095464
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| ||||||| |||||| ||||||||||||||| | |||  |||||||||||||| ||||| ||||||||||    
T  8095388 tggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttag 8095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10053842 - 10053766
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| |||| |||||||| ||  ||| ||||||||    
T  10053842 ttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgtt 10053766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39546775 - 39546675
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||  ||||||| | |||| |||||||| |||||||| ||||||||||||||||||| | ||| |||||||  || ||||| | |||||||    
T  39546775 ttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtta 39546676  T
Q  101 g 101  Q
    |    
T  39546675 g 39546675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37276341 - 37276274
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||| ||||||||| |||||| | || |||| |||||||||||||| |||||||||||||||||||||    
T  37276341 ttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatct 37276274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39515217 - 39515280
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | || |||||| |||||||||||| ||||||||||| |||||    
T  39515217 ttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataa 39515280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38003 - 38103
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||| | | | |||||||||||||||||||||| ||||||||| ||||| |||     ||||||||||| ||||| | |||||||    
T  38003 ttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcctctccgtta 38102  T
Q  101 g 101  Q
    |    
T  38103 g 38103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39301 - 39242
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||| || | ||||||| ||||||||||||| |||| |||||||||||||||||    
T  39301 ttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatttggtccc 39242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6843773 - 6843832
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| |||||||||||||    
T  6843773 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 6843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36071476 - 36071413
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||| ||| ||||||||| ||||||| |||||||| ||| |||||| ||||||||||||    
T  36071476 ttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataa 36071413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4810221 - 4810133
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||||||| ||| |||| || ||| |||||| ||| |||||||  | |||||||||| ||||| ||||||||| |||||    
T  4810221 ttaacttatttttggtttttaatttggt-ccttaattataaaatgtctcaatttaattccataaatcttatgtcatttactattttggtc 4810133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35945535 - 35945446
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||| ||||||| | | ||||| |||||||||| ||| ||| |||||||||||| ||||  ||  |||||||||| |||||    
T  35945535 ttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtc 35945446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36734642 - 36734577
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||||||||||||  |||||| | ||||| ||| ||||||| |||| |||||||||||||||||||    
T  36734642 ttaacttatttttcattttcactttggtcgcctgactataatgtgtctcaatttggtcccataaat 36734577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7770995 - 7770919
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    |||||||||||||  |||||| | || ||  ||||||||||||||||||||||||||| ||||| ||| ||| ||||    
T  7770995 ttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccgtt 7770919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6844671 - 6844612
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||| ||||||| ||||||||| |||||||||||||    
T  6844671 ttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtccc 6844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7561817 - 7561876
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||| ||| |||| ||||||||    
T  7561817 ttaacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtccc 7561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8502372 - 8502313
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| ||||||| |||||    
T  8502372 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaattttgtccc 8502313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10052122 - 10052181
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||| ||| |||||| | ||||||||||| |||||||||| |||| ||||||||    
T  10052122 ttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtccc 10052181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14433640 - 14433699
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| |||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  14433640 ttaatttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtccc 14433699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 20308655 - 20308718
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttcc 96  Q
    ||||||| |||||| ||||||||||| ||||| |||  |||||||||||||| ||||| |||||    
T  20308655 taactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttcc 20308718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 21095288 - 21095351
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttcc 96  Q
    ||||||| |||||| ||||||||||| ||||| |||  |||||||||||||| ||||| |||||    
T  21095288 taactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttcc 21095351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 34616179 - 34616214
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||| |||||||||||||||||||||    
T  34616179 taactataaagtgtctcaatttggtcccataaatct 34616214  T

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Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41178768 - 41178709
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||| ||||    
T  41178768 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttgctccc 41178709  T

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Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25785986 - 25786075
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  25785986 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtc 25786075  T

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Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13930773 - 13930675
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||||    
T  13930773 ttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtt 13930675  T

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Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25787262 - 25787162
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||||| ||||| | |||||||    
T  25787262 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttggtcctctccgtta 25787163  T
Q  101 g 101  Q
    |    
T  25787162 g 25787162  T

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Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26056245 - 26056145
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||| | |||||||    
T  26056245 ttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgtta 26056146  T
Q  101 g 101  Q
    |    
T  26056145 g 26056145  T

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Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13641275 - 13641374
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  13641275 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 13641374  T

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Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 26054916 - 26055005
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtct 91  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||    
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtct 26055005  T

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Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47136785 - 47136685
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  ||||||||| ||| ||||||||||| ||||| | |||||||    
T  47136785 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 47136686  T
Q  101 g 101  Q
    |    
T  47136685 g 47136685  T

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Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47411002 - 47411102
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||| | |||||||    
T  47411002 ttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctccgtta 47411101  T
Q  101 g 101  Q
    |    
T  47411102 g 47411102  T

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Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14071301 - 14071203
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||  |||||||||| ||| ||||| ||||||||    
T  14071301 ttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtt 14071203  T

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Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16218576 - 16218476
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||| |||||| ||||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||| ||||| | |||||||    
T  16218576 ttaatttatttttagttttctatctgatcccctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgtta 16218477  T
Q  101 g 101  Q
    |    
T  16218476 g 16218476  T

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Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47411546 - 47411463
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||| ||||||| || |||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  47411546 ttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactatt 47411463  T

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Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9592266 - 9592355
Alignment:
Q  11 tttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| || || |||||||||    
T  9592266 tttgattttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgtta 9592355  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3979411 - 3979311
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||| |||  || ||||||||||| ||||| | |||||||    
T  3979411 ttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgtta 3979312  T
Q  101 g 101  Q
    |    
T  3979311 g 3979311  T

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Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16217458 - 16217558
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||| ||| || ||  ||||||||||||||| |||||||||||| |||||||| ||||| ||||||||| ||||| | |||||||    
T  16217458 ttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtta 16217557  T
Q  101 g 101  Q
    |    
T  16217558 g 16217558  T

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Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13929313 - 13929380
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||    
T  13929313 ttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatct 13929380  T

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Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21277012 - 21277095
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||||||||||| ||||  |||||||||||||| | |||||||||||||||||||||  || |||||||||||    
T  21277012 ttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactatt 21277095  T

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Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 52181403 - 52181304
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  |||||||| |||||| ||||||||||||||| ||||||| ||| ||||||||| |||| |||||||||| ||||| | |||||||    
T  52181403 ttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctccgtta 52181304  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 42248401 - 42248324
Alignment:
Q  3 aacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttac 42248324  T

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Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48467279 - 48467352
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtc 74  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| | ||||||| |||||    
T  48467279 ttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc 48467352  T

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Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 36511405 - 36511329
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||| | ||||||||    
T  36511405 tggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttag 36511329  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3978062 - 3978161
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | ||||||  |||||||||||||| |||||||| |||||||| |||  |||||||||||||| ||||| | |||||||    
T  3978062 ttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgtta 3978161  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49139819 - 49139886
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||  | ||||||| |||||||||||||| ||||||||||| |||||||||    
T  49139819 ttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatct 49139886  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9633793 - 9633849
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggt 57  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||    
T  9633793 ttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggt 9633849  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 14169669 - 14169737
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||||||||| ||||||| || |||||    
T  14169669 taactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttag 14169737  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 19466271 - 19466215
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||    
T  19466271 taactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggt 19466215  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 36509853 - 36509917
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||  || ||||||||||| ||||    
T  36509853 tggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggt 36509917  T

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Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50679919 - 50679819
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||| | | ||||||| |||||||||||||| ||||||||||||||||| |||     ||||||||| ||||||| | |||||||    
T  50679919 ttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgtta 50679820  T
Q  101 g 101  Q
    |    
T  50679819 g 50679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 52743070 - 52742974
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||  |||||| | |||||||||||||||||||||| |||| |||||||| ||  | | |||||||||||| |||||||| | ||||||||    
T  52743070 cttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggtcctctccgttag 52742974  T

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Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2236831 - 2236890
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  2236831 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 2236890  T

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Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35683073 - 35683132
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  35683073 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 35683132  T

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Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48934259 - 48934318
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  48934259 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48934318  T

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Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48935208 - 48935149
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  48935208 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48935149  T

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Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44977239 - 44977284
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgt 46  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    
T  44977239 ttaacttatttttggttttcactttggtcccctaactataaagtgt 44977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14390276 - 14390376
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||   ||||| | |||||| ||||||||||| ||| |||||||||| ||||||||||  | |||||||| ||| ||||| | |||||||    
T  14390276 ttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctccgtta 14390375  T
Q  101 g 101  Q
    |    
T  14390376 g 14390376  T

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Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 19464619 - 19464707
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||   |||||| | ||||||| ||| ||||||||||||||||||||| ||| ||||||  || ||||||||||| |||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtc 19464707  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34653453 - 34653513
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccca 61  Q
    |||||||||||| |||||||| | ||||||| |||||||||||||| |||||||| |||||    
T  34653453 ttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttgatccca 34653513  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2238076 - 2238017
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||||||| |||||||||||||| |||||||||||||    
T  2238076 ttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 2238017  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25035376 - 25035435
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  25035376 ttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 25035435  T

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Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25040589 - 25040648
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  25040589 ttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 25040648  T

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Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38458104 - 38458163
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||| ||||    
T  38458104 ttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttgatccc 38458163  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 47560161 - 47560256
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||| | |||||| | ||||||||||||||||||||||||||||||| |||  ||||| |  || |||||||| || ||||| | |||||||    
T  47560161 cttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttactgttttggtcatctccgtta 47560256  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 51726910 - 51726859
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  51726910 taactataaagtgtctcaatttggttccataaatcttctgtcgtttactatt 51726859  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9119820 - 9119878
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || ||| ||| |||||| ||||||||||||||| ||||||||||||    
T  9119820 ttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtcc 9119878  T

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Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33793797 - 33793847
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaa 51  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||| ||||    
T  33793797 ttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

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Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43190596 - 43190538
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||||  ||| ||| ||||||||||||| |||| ||||||||||||||||    
T  43190596 ttaacttatttttgaattttaatttggtcccctaactttaaactgtttcaatttggtcc 43190538  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1061550 - 1061493
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| ||||| | | |||||||||||||||||||| | |||||||||    
T  1061550 ttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtc 1061493  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51424269 - 51424326
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| ||||| | ||||||| ||| |||||||||| |||||||||||    
T  51424269 ttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtc 51424326  T

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Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2973106 - 2973006
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | | ||||| ||| |||||||||| |||||||||||| |||| ||| |   ||||||||| | ||||| |||| ||||    
T  2973106 ttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttctgtta 2973007  T
Q  101 g 101  Q
    |    
T  2973006 g 2973006  T

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Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13642655 - 13642555
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||| |||| | |||||||| ||| |||| |||||||| | |  || ||||||  ||| |||||| ||||||||    
T  13642655 ttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgtta 13642556  T
Q  101 g 101  Q
    |    
T  13642555 g 13642555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20953306 - 20953406
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | | || |  |||||||||||||| |||||||||||| |||||||| | ||| ||||| ||| | ||| | |||||||    
T  20953306 ttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcctctccgtta 20953405  T
Q  101 g 101  Q
    |    
T  20953406 g 20953406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9123497 - 9123442
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttgg 56  Q
    |||||||||||| || ||| | | ||||||| ||||||||||||||||||||||||    
T  9123497 ttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14312793 - 14312852
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||| | | ||||| |||| ||||||||||| |||||||||||||    
T  14312793 ttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtccc 14312852  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29264889 - 29264948
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||||| |||||||| || ||| ||||||||||| ||| | |||||||||||    
T  29264889 ttaacttatttttgattttcaatttgatcctctaactataaaatgtcttaatttggtccc 29264948  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32823639 - 32823576
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||| | | ||||||||||||| |||| ||| |||||||||||||||||    
T  32823639 ttaacttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataa 32823576  T

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Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 34532776 - 34532741
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||||||||||||| |||||||||||||    
T  34532776 tggtcccctaactataaagtgtctcaatttggtccc 34532741  T

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Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48973216 - 48973275
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | | |||||||||||||||||||| |||||||| ||||    
T  48973216 ttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatccc 48973275  T

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Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48974504 - 48974445
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||| ||||||||||||||||| |||| ||||||||    
T  48974504 ttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtccc 48974445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49141594 - 49141531
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||| |||||||||||||||| |  | |||| ||||||| ||||||||||| ||||||||||||    
T  49141594 ttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataa 49141531  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 22167823 - 22167885
Alignment:
Q  27 gtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||  || |||||| |||| ||||    
T  22167823 gtcccttaaatattaagtgtttcaatttggtcccataaatcttctgccgtttattattttggt 22167885  T

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Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44979453 - 44979511
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||| ||||||| | ||||| | |||||||||||||| |||| |||||||    
T  44979453 ttaacttattttttgttttcactttggtctcttaactataaagtgtctcaaattggtcc 44979511  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 2971743 - 2971780
Alignment:
Q  27 gtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  2971743 gtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 14765168 - 14765127
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||| ||||||| |||||| |||||||||||||||||||    
T  14765168 tggtcccttaactattaagtgtgtcaatttggtcccataaat 14765127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34531681 - 34531738
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||||| | |||||| ||||||||||| ||| |||||||||||    
T  34531681 ttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtc 34531738  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 14171339 - 14171283
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||| ||| |||||| ||||||||||||||||||||||||   |||| |||||||||    
T  14171339 tcccttaattataaaatgtttcaatttggtcccataaatcatctgtcatttactatt 14171283  T

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Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19279710 - 19279610
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||| ||||| |||||||||    
T  19279710 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctttccgtta 19279611  T
Q  101 g 101  Q
    |    
T  19279610 g 19279610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 22744764 - 22744863
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||| |||||||    
T  22744764 ttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactattttggtcttctccgtta 22744863  T

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Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 46673512 - 46673589
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactat 83  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactat 46673589  T

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Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 43007745 - 43007664
Alignment:
Q  3 aacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  43007745 aacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactatt 43007664  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22061893 - 22061793
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||  ||||||||| ||||||||||||||||||  || ||||||||||||||||||||| ||| ||||||||||| | ||||| |||||||    
T  22061893 ttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactattttagtcttctccgtta 22061794  T
Q  101 g 101  Q
    |    
T  22061793 g 22061793  T

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Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22746418 - 22746318
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||||  || ||||||||||| || || | |||||||    
T  22746418 ttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctctccgtta 22746319  T
Q  101 g 101  Q
    |    
T  22746318 g 22746318  T

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Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43006403 - 43006503
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||| ||| ||||| ||||| ||||| | |||||||    
T  43006403 ttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtcatctccgtta 43006502  T
Q  101 g 101  Q
    |    
T  43006503 g 43006503  T

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Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46675032 - 46674933
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| || ||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  46675032 ttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 46674933  T

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Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 40930441 - 40930503
Alignment:
Q  6 ttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  40930441 ttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatct 40930503  T

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Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7148156 - 7148076
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttact 81  Q
    ||||||||||||  ||||||||| |||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7148156 ttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttact 7148076  T

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Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14206691 - 14206791
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||||| | ||||| |||||||||||| |||||||||||||||| ||||||||  |||||||||||||| || || | |||||||    
T  14206691 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14206790  T
Q  101 g 101  Q
    |    
T  14206791 g 14206791  T

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Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14215381 - 14215481
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||||| | ||||| |||||||||||| |||||||||||||||| ||||||||  |||||||||||||| || || | |||||||    
T  14215381 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14215480  T
Q  101 g 101  Q
    |    
T  14215481 g 14215481  T

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Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25153676 - 25153743
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  25153676 ttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatct 25153743  T

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Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46457088 - 46457155
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||    
T  46457088 ttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatct 46457155  T

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Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40926617 - 40926552
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||||    
T  40926617 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaat 40926552  T

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Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 7146799 - 7146886
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||| || |||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggt-ccttaaatcttatgtcatttactgttttggtc 7146886  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4858442 - 4858359
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||| ||||||| | || ||||||||||||||| ||| |||||||||||||||||||||  ||| ||||||||||    
T  4858442 ttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactatt 4858359  T

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Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 33459640 - 33459541
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||| |||     ||||||||| | |||||||||| |||||    
T  33459640 taacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtggtcttttctgttag 33459541  T

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Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38406036 - 38406135
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||||| | |||||||||||||||||||||| ||||  |||| ||||||||||  || |||||||| || ||||| |||||||||    
T  38406036 ttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgtta 38406135  T

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Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43935203 - 43935286
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||||| ||||||||||| |||||||||  || |||||||||||    
T  43935203 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatt 43935286  T

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Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24873695 - 24873597
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||| ||||||| | || | ||||||||||||||||| ||||||||||||||||| |||  || ||||||| ||| ||||| ||||||||    
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtt 24873597  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18801233 - 18801298
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||  ||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  18801233 ttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19278371 - 19278460
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||| ||||| | ||||||| ||| |||||||||| ||||||||||||||||| |||  || ||||||||||| |||||    
T  19278371 ttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 19278460  T

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Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19848932 - 19848867
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||||    
T  19848932 ttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

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Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43930337 - 43930426
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||| | ||||||||||||||| ||  || |||||||||||| ||||||||  |||||||||||||| |||||    
T  43930337 ttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtc 43930426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4857219 - 4857299
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttact 81  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| || ||||||||||| ||||||  || ||||||||    
T  4857219 ttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttact 4857299  T

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Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22060481 - 22060581
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||  ||||| ||| |||||| ||||||||||||||| |||||||||| ||| || ||| ||| ||||||||||| ||||| | |||||||    
T  22060481 ttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccgtttactattttggtcatctccgtta 22060580  T
Q  101 g 101  Q
    |    
T  22060581 g 22060581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43936238 - 43936138
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||| | | ||||||||| ||||| |||  |||||||||||||| ||||| | |||||||    
T  43936238 ttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctccgtta 43936139  T
Q  101 g 101  Q
    |    
T  43936138 g 43936138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 46458804 - 46458744
Alignment:
Q  8 atttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  46458804 atttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatct 46458744  T

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Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17288318 - 17288255
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||| | | |||||||||||||||||||||| |||||||||||||||||    
T  17288318 ttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataa 17288255  T

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Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45721864 - 45721801
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  45721864 ttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataa 45721801  T

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Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1970831 - 1970896
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||| |||||||||||||| | | |||| || ||||||||||||||||||||||||||||||||||    
T  1970831 ttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

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Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18802487 - 18802422
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||| ||||||| | || ||||||||||||||||||| ||||||| |||||||||||    
T  18802487 ttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaat 18802422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 35127836 - 35127917
Alignment:
Q  9 tttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||| ||| |||| | ||||||||||| ||| ||||||| ||||||||||||| ||| ||||||||||| |||||    
T  35127836 tttttggttttaaatttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtc 35127917  T

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Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21171584 - 21171525
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  21171584 ttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtccc 21171525  T

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Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25155034 - 25154967
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| |||||||  || |||||||||    
T  25155034 ttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatct 25154967  T

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Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25532164 - 25532230
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||| ||| |||||||||    
T  25532164 ttaacttattttttgttt-caatttggtcccctaactataaagtgtttcgatttagtctcataaatct 25532230  T

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Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28325090 - 28325153
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||| | | ||||||||||||| |||||| | |||||||||||||||||    
T  28325090 ttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

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Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41516442 - 41516379
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||| | | |||||||||||||||||||||| | |||||||||||||||    
T  41516442 ttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

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Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41616642 - 41616701
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  41616642 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 41616701  T

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Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 48754015 - 48754114
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||| | ||| | | ||||||| ||| |||||||||||||||||| |||| |||||||| ||||||||||| ||| | ||| | ||||||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttag 48754114  T

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Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13446756 - 13446656
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||| |   ||||||| ||||| |||||||||||||||||||||  || |||||| |||  ||||| | |||||||    
T  13446756 ttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtttattatattggtcctctccgtta 13446657  T
Q  101 g 101  Q
    |    
T  13446656 g 13446656  T

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Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14107850 - 14107926
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| ||||  ||||||| || ||||  |||||||    
T  14107850 ttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14107926  T

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Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14417807 - 14417883
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| ||||  ||||||| || ||||  |||||||    
T  14417807 ttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14417883  T

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Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 27899280 - 27899212
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||| | | |||||||| ||||||||||||  |||||||||||||| ||||||| ||||||||    
T  27899280 taactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttag 27899212  T

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Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36702795 - 36702891
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccg 97  Q
    ||||||||||||| | ||||| | ||||||| ||||| |||| ||| ||||||||||||||||||| |  || ||||||||||| || || ||||||    
T  36702795 ttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttactattttgatcatttccg 36702891  T

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Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36703049 - 36702949
Alignment:
Q  1 ttaacttattttt-ggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||| || ||||| | | ||||||||| | |||| ||| ||||||||||||||||||| |  || ||||||||||| ||||| ||||||||    
T  36703049 ttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgtttactattttggtcctttccgtt 36702950  T
Q  100 a 100  Q
    |    
T  36702949 a 36702949  T

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Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47163171 - 47163271
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||| ||| | | |||||| ||||||||||||||  | |||||||||||||||||||  |  ||||||||||| ||||| | |||||||    
T  47163171 ttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtta 47163270  T
Q  101 g 101  Q
    |    
T  47163271 g 47163271  T

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Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48672873 - 48672773
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||| ||||| ||| |||| || | | | |||||||| |||||||||||||||||||| | |||||||||||||| | ||| | |||||||    
T  48672873 ttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtcctctccgtta 48672774  T
Q  101 g 101  Q
    |    
T  48672773 g 48672773  T

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Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1904118 - 1904059
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||| ||||||| |||| ||| |||||||||||||    
T  1904118 ttaacttatttttggatttcaatttggtctcctaactttaaactgtctcaatttggtccc 1904059  T

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Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17287092 - 17287151
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||| || | ||||||| ||||||||||||| |||| |||||||||||||||||    
T  17287092 ttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatttggtccc 17287151  T

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Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21171313 - 21171372
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  21171313 ttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 21171372  T

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Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30224074 - 30224015
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||| |||||||||||||    
T  30224074 ttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtccc 30224015  T

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Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34557415 - 34557474
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| |||||||||||||    
T  34557415 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 34557474  T

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Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34558399 - 34558340
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||| | |||||||||||||    
T  34558399 ttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtccc 34558340  T

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Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38001522 - 38001581
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||| |||||||||||||||||||||||||||||    
T  38001522 ttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtccc 38001581  T

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Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41126257 - 41126316
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||  | ||||| | |||||||||||||||||||||| |||||||||||||    
T  41126257 ttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtccc 41126316  T

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Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41515015 - 41515077
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||| |||||||||||||| | | |||| || ||||||||||||||||||||||||||||||||    
T  41515015 ttaatttatttttggttttaattttggttcc-taactataaagtgtttcaatttggtcccataa 41515077  T

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Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41127269 - 41127211
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || ||||| | |||||||||||||||||||| | ||||||||||||    
T  41127269 ttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcc 41127211  T

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Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41618597 - 41618539
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||||| ||||| | ||||||||||| |||||||||| | ||||||||||    
T  41618597 ttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtcc 41618539  T

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Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10257484 - 10257386
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   || ||||| || |||| ||||||| |||||| |||||||||||||||||  ||| |||||||||||||| | ||| |||| ||||    
T  10257484 ttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataa--ctcttgtcgtttactattttagtcatttctgtta 10257387  T

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Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43931964 - 43931875
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||| ||||||||  |||||| |||||||| |||||||| ||  || |||||||||||||||||| ||  |||| ||||||||| |||||    
T  43931964 ttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtcccataaaccttctgtcatttactattttggtc 43931875  T

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Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45089490 - 45089554
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||| | |||||| || |||||||||||| |||||||  ||||||||||    
T  45089490 ttaacttatttttggttttcattttggtcctct-actataaagtgtctcaatttaatcccataaat 45089554  T

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Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45719633 - 45719726
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtctttt 94  Q
    |||| ||||||||| |||||| | || ||||||||||||||||||| | ||||||||| ||||| |||  ||| |||||| ||| |||| ||||    
T  45719633 ttaatttatttttgattttcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggtttttt 45719726  T

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Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33458328 - 33458380
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatt 53  Q
    ||||||||||||||||||||| | ||||||  |||||||||||||| ||||||    
T  33458328 ttaacttatttttggttttcattttggtcctttaactataaagtgtctcaatt 33458380  T

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Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 35128244 - 35128200
Alignment:
Q  46 tttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||    
T  35128244 tttcaatttggtcctataaatcttatgtcgtttactattttggtc 35128200  T

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Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1903848 - 1903907
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||| |||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  1903848 ttaacttattcttgaatttcaatttggtcccctaactttaaactgtctcaatttggtccc 1903907  T

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Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 7347282 - 7347239
Alignment:
Q  37 tataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    |||||||||| |||||||||||| |||||||| |||||||||||    
T  7347282 tataaagtgtctcaatttggtcctataaatcttatgtcgtttac 7347239  T

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Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30222664 - 30222723
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| |||||||||| ||||| | ||||||||||| |||||||| | |||||||||||||    
T  30222664 ttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtccc 30222723  T

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Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36673934 - 36673875
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||| | | |||||||||||||||||| ||| |||||||||||||    
T  36673934 ttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtccc 36673875  T

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Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38002612 - 38002553
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||  | ||||| | ||||||| |||||||||||||| |||||||||||||    
T  38002612 ttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtccc 38002553  T

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Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38408372 - 38408313
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| ||||||||| |||||| | |||||| ||||||||||||||| |||| ||||||||    
T  38408372 ttaatttatttttgattttcactttggtcctctaactataaagtgtctcaaattggtccc 38408313  T

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Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47809684 - 47809621
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  47809684 ttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 47809621  T

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Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48671096 - 48671178
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||| |||||||||||||| ||| || || | |||||||||||| | |||||||| | |||||||||| ||| |||||||||||    
T  48671096 ttaatttatttttggtttttaatttgatctcttaactataaagtatctcaatttgat-ccataaatcttatgccgtttactatt 48671178  T

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Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 35483607 - 35483649
Alignment:
Q  16 ttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||| | ||||||| ||||||||||||||||||||||||||    
T  35483607 ttttcagtttggtcccttaactataaagtgtttcaatttggtc 35483649  T

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Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 41985951 - 41985995
Alignment:
Q  19 tcaatctggtcccctaactataaagtgtttcaatttggtcccata 63  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||    
T  41985951 tcaatttgatcccctaactataatttgtttcaatttggtcccata 41985995  T

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Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5311297 - 5311386
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||    
T  5311297 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttggtc 5311386  T

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Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22300001 - 22299902
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  22300001 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtta 22299902  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8412414 - 8412314
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  8412414 ttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctccgtta 8412315  T
Q  101 g 101  Q
    |    
T  8412314 g 8412314  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31738381 - 31738481
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||  |||||| ||| ||||| | |||||||    
T  31738381 ttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgtta 31738480  T
Q  101 g 101  Q
    |    
T  31738481 g 31738481  T

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Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8411104 - 8411203
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||  |||||||| ||| ||||||||||| ||||| | |||||||    
T  8411104 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtta 8411203  T

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Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31740370 - 31740272
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||| ||| ||||| | ||||||    
T  31740370 ttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtt 31740272  T

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Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9927624 - 9927722
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||| | | |||||||||||||||||||||| ||||||||||||||||||  |||  |||||||||||| ||||| | |||||||    
T  9927624 ttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaacttca-atcgtttactattttggtcatctccgtta 9927722  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33802115 - 33802048
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| | |||||| ||||||||||||    
T  33802115 ttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatct 33802048  T

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Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33807707 - 33807772
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| |||||||| | ||||||||    
T  33807707 ttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaat 33807772  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8447239 - 8447298
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  8447239 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8447298  T

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Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8456043 - 8456102
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  8456043 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8456102  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27438808 - 27438907
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||  |||||||||||||| |||||||| |||||||||| |  || |||||||| || ||||| | |||||||    
T  27438808 ttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgtta 27438907  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 293730 - 293640
Alignment:
Q  9 tttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||| ||||||||| || || ||||| |||||||||||||||||||||| ||||| |||  |||||||||| ||| ||||| | ||||||    
T  293730 ttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtt 293640  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34084230 - 34084153
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    ||||||||||| ||||||||| | ||||||  ||| |||||||||| ||||||||||| |||||||||  ||||||||||    
T  34084230 ttaacttatttctggttttcactttggtcc--taaatataaagtgtctcaatttggtctcataaatcttctgtcgtttac 34084153  T

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Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18773672 - 18773731
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||||||||    
T  18773672 ttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtccc 18773731  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19367735 - 19367794
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||||||||||||||||||| |||||||||||||    
T  19367735 ttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 19367794  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27440273 - 27440174
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | || |||| ||||| |||| ||| |||||||||||||||||||||  |  ||||||||||| ||||| | |||||||    
T  27440273 ttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtta 27440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28225442 - 28225501
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||||||||||||||||||| |||||||||||||    
T  28225442 ttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 28225501  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28226516 - 28226457
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||||    
T  28226516 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccc 28226457  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13173055 - 13173112
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| |||||||||||    
T  13173055 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 13173112  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19368616 - 19368559
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||||| | |||||| ||||||||||||||| |||||||||||    
T  19368616 ttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtc 19368559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22298622 - 22298722
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |||||| |||| | |||||||| ||| |||| |||||||| | |  || ||||||  ||| |||||| ||||||||    
T  22298622 ttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgtta 22298721  T
Q  101 g 101  Q
    |    
T  22298722 g 22298722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26581971 - 26582047
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||| ||| | | ||||||| |||||||||||||  ||||||||||||| || ||||  |||||||    
T  26581971 ttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcgtt 26582047  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26584135 - 26584079
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggt 57  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| ||||||||||    
T  26584135 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2138735 - 2138676
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| |||||||||| ||| | | |||||||||||||||||||||| ||||||| |||||    
T  2138735 ttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtccc 2138676  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 9754300 - 9754227
Alignment:
Q  127 ttaacctttgccacgtgt-agttataattggtgatcaaaggttgaatttgaatagcgcacacaagtatacaata 199  Q
    |||||||||||||| ||| | |||  |||||||||||| ||||||||||| | ||| ||||| |||||||||||    
T  9754300 ttaacctttgccacatgtcacttaggattggtgatcaagggttgaatttgtaaagctcacacgagtatacaata 9754227  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 14326218 - 14326270
Alignment:
Q  48 tcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||| |||  | |||||||||||| ||||| |||||||||    
T  14326218 tcaatttggtcccataattcttctatcgtttactattgtggtcctttccgtta 14326270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 14328845 - 14328773
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| ||||||| |||||| | ||||||||| ||||| |||  |||||||||||||| ||||| | |||||||    
T  14328845 tcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgtta 14328773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 14419228 - 14419280
Alignment:
Q  48 tcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||| |||  | |||||||||||| ||||| |||||||||    
T  14419228 tcaatttggtcccataattcttctatcgtttactattgtggtcctttccgtta 14419280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 14421855 - 14421783
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| ||||||| |||||| | ||||||||| ||||| |||  |||||||||||||| ||||| | |||||||    
T  14421855 tcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgtta 14421783  T

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Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33377462 - 33377362
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  33377462 ttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 33377363  T
Q  101 g 101  Q
    |    
T  33377362 g 33377362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37560397 - 37560298
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||  ||||| | |||||||    
T  37560397 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttggtcctctccgtta 37560298  T

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Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1273530 - 1273431
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||| ||||| | |||||||    
T  1273530 ttaacttatttttggtttt-aatttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgtta 1273432  T

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Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 5688727 - 5688635
Alignment:
Q  9 tttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||| | ||||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgttag 5688635  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37559016 - 37559116
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| || |   ||||||||||| ||||| | |||||||    
T  37559016 ttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcatctccgtta 37559115  T
Q  101 g 101  Q
    |    
T  37559116 g 37559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33376236 - 33376319
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||||||||||| | || |||||| |||||||||| |||||||||||||||||||||  ||||||||||||||    
T  33376236 ttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactatt 33376319  T

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Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 35787815 - 35787914
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||  || ||||| | ||||||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttag 35787914  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 55953950 - 55953861
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||| ||||||||||||| ||||||| ||| ||||||||||| |||||    
T  55953950 ttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtc 55953861  T

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Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44128432 - 44128332
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  |||||||| |||||||||||||||||||||| ||||||| ||||  ||||||| ||| ||||||||||| ||||| | |||||||    
T  44128432 ttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgtta 44128333  T
Q  101 g 101  Q
    |    
T  44128332 g 44128332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 55952843 - 55952932
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||| ||||||||| |||| ||| | |||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||| |||||    
T  55952843 ttaatttatttttgatttttaatttagtcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattattttggtc 55952932  T

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Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 10403298 - 10403386
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||||||| | | |||||||||||||||||||||| | ||||||||| | ||||||| | ||||||||||||| |||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtc 10403386  T

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Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46796124 - 46796024
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||| |||     ||||||||||| ||||| | |||||||    
T  46796124 ttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgtta 46796025  T
Q  101 g 101  Q
    |    
T  46796024 g 46796024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 53400203 - 53400303
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| | ||||| | ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||| ||| | ||| | |||||||    
T  53400203 ttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtta 53400302  T
Q  101 g 101  Q
    |    
T  53400303 g 53400303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44305077 - 44305010
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatct 44305010  T

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Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21104408 - 21104310
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||| ||||||||||| ||||  |||  |||||||||| ||| ||||| ||||||||    
T  21104408 ttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttccgtt 21104310  T

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Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28103584 - 28103486
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||  ||  || ||||||| ||| ||||| ||||||||    
T  28103584 ttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtt 28103486  T

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Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31711110 - 31711208
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||| ||||| | ||||||  |||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||| || || ||||||||    
T  31711110 ttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttgatcctttccgtt 31711208  T

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Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11113760 - 11113860
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||| |||||||| | | ||||| |||||||||||||| ||||||||||| ||||| |||  || ||||||| ||| ||||| |||||||||    
T  11113760 ttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgtta 11113859  T
Q  101 g 101  Q
    |    
T  11113860 g 11113860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11115078 - 11114978
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||  ||||||| | |||||||||||||||||||| | ||||||||||||||||| |||  |||||||||| ||| ||| | | |||||||    
T  11115078 ttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctccgtta 11114979  T
Q  101 g 101  Q
    |    
T  11114978 g 11114978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15446768 - 15446668
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||  |||| |||||||||||||||||||||||||||||| |  |  ||||||||||| ||||| | |||||||    
T  15446768 ttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctccgtta 15446669  T
Q  101 g 101  Q
    |    
T  15446668 g 15446668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 34439734 - 34439658
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| |||||||||| |||||||||||||||||||||||||  || ||||||||||| ||||| | ||||||||    
T  34439734 tggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttag 34439658  T

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Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 38417595 - 38417671
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||  |||| | ||||||||    
T  38417595 tggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttag 38417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 306595 - 306654
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||    
T  306595 ttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 306654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 5687217 - 5687292
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||| | |||||||    
T  5687217 tggtcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15787600 - 15787537
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  15787600 ttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 15787537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27408781 - 27408848
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||  ||||||||| |||||  ||||||||||||||| |||||||||||||||||||||    
T  27408781 ttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatct 27408848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30683125 - 30683058
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||| ||||||||| |||||| | ||||||| |||||||||||||| |||||||||||||||||||||    
T  30683125 ttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatct 30683058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43894123 - 43894186
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||| |||||    
T  43894123 ttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataa 43894186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46794858 - 46794917
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||    
T  46794858 ttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 46794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 56000305 - 56000400
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttcc 96  Q
    |||||||||||||| |||||| | || ||||||||||||||||||| ||||||| |||| |||| |||  || ||||||| ||| |||||||||||    
T  56000305 ttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtcttttcc 56000400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 86821 - 86921
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||| ||||||| | |||| ||||||||||||||  | ||||||||||||||||||| |  || |||||||| || ||||||| |||||||    
T  86821 ttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttactgttttggtcttctccgtta 86920  T
Q  101 g 101  Q
    |    
T  86921 g 86921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 17319092 - 17319160
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||||||||||||||||||||| ||||||||||  || ||||||||||| |||||||  |||||||    
T  17319092 taactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgttag 17319160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38370300 - 38370400
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  |||||||| |||||  ||||| ||||||||| ||||||||||| ||||| |||  |||||||||| ||| ||||| | |||||||    
T  38370300 ttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtcatctccgtta 38370399  T
Q  101 g 101  Q
    |    
T  38370400 g 38370400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12396972 - 12396913
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  12396972 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 12396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15786970 - 15787033
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||||| | || ||||||||||||||| ||| |||||||||||||||||    
T  15786970 ttaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataa 15787033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39590959 - 39591018
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||  |||||||    
T  39590959 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtccc 39591018  T

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Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44126614 - 44126716
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttca--atttggtcccataaatctcatgtcgtttactattatggtcttttccgt 98  Q
    |||||||||||||  |||||||| |||||  |||||||||||| || |||  |||||||||| ||||||| ||| ||||||||||| ||||||| || ||    
T  44126614 ttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccgtttactattttggtcttctctgt 44126713  T
Q  99 tag 101  Q
    |||    
T  44126714 tag 44126716  T

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Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 52658929 - 52658996
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||  |||||| | |||||||||||||||||| |||||||||||||| | ||||||||    
T  52658929 ttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatct 52658996  T

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Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29663661 - 29663758
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||||||||||| | || |||| |||||||||| ||| ||||||||||||||||| |||  || ||||||| ||| || |||||||||||    
T  29663661 ttaatttatttttggttttcattttgatccc-taactataaattgtctcaatttggtcccataactcttctgccgtttaccattttgatcttttccgtt 29663758  T

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Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 34438450 - 34438512
Alignment:
Q  27 gtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    ||||| |||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||    
T  34438450 gtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggt 34438512  T

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Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35789688 - 35789638
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaa 51  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  35789688 ttaacttatttttggttttcactttggtcccgtaactataaagtgtttcaa 35789638  T

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Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15445454 - 15445511
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| ||||| | ||||||||||| |||||||||| |||||||||||    
T  15445454 ttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtc 15445511  T

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Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28370739 - 28370674
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||| ||||||| |||||| |||||| |||| ||| ||||||||||||| |||||    
T  28370739 ttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaaat 28370674  T

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Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3217707 - 3217607
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | ||||||  ||||| |||||||||| |||||| || |||||||||  ||| |||||||||| ||||| | |||||||    
T  3217707 ttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtttactattttggtcctatccgtta 3217608  T
Q  101 g 101  Q
    |    
T  3217607 g 3217607  T

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Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26788540 - 26788640
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | ||||||  ||| |||||| | | ||||||| |||||||||||||  || ||||||||||| ||||| | |||||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T
Q  101 g 101  Q
    |    
T  26788640 g 26788640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29686274 - 29686350
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||||||||| | ||||||| |||||||||| ||| |||| |||||||| ||  ||| ||||||||    
T  29686274 ttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgtt 29686350  T

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Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50531854 - 50531754
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   || ||||| || |||| ||||||| |||||| ||||||||||||||||| |||  |||||||||||||| | ||| |||| ||||    
T  50531854 ttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttctgtta 50531755  T
Q  101 g 101  Q
    |    
T  50531754 g 50531754  T

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Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6616309 - 6616250
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||  ||||||| | |||||||||||||||||||||| |||| ||||||||    
T  6616309 ttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtccc 6616250  T

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Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19049970 - 19049911
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||| | || |||||||| |||||||||| |||||||||||||    
T  19049970 ttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtccc 19049911  T

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Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23752034 - 23752093
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||| | ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  23752034 ttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtccc 23752093  T

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Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 26121924 - 26121971
Alignment:
Q  37 tataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  26121924 tataaagtgtttcaatttgatcccataaatctcctgtcgtttagtatt 26121971  T

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Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26376347 - 26376410
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||| |||||||||||||||| | || |||||||||||||||  || |||||||||||||||||    
T  26376347 ttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtcccataa 26376410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30682738 - 30682805
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||||| | |||||||||  ||||||||    
T  30682738 ttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatct 30682805  T

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Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40143672 - 40143735
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||||| | | |||||||||||||||||||| |||||||| || |||||    
T  40143672 ttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataa 40143735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40146721 - 40146658
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||| ||||||||||||| | | ||||||  |||||||||||||| |||||||||||||||||    
T  40146721 ttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataa 40146658  T

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Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47668695 - 47668636
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||  ||||||| | |||||||||||||||||||||| |||| ||||||||    
T  47668695 ttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtccc 47668636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 56001366 - 56001303
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||||||||||||  |||||| | ||| |||||||||||||||||| |||||||||||| ||||    
T  56001366 ttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataa 56001303  T

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Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11094544 - 11094609
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||| |||||||||||||| | | ||||| |||||||||||||||| | |||||||||| ||||||    
T  11094544 ttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaat 11094609  T

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Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38555374 - 38555317
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||| ||||| | | |||||||||||||||||||||| | |||||||||    
T  38555374 ttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtc 38555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48207815 - 48207758
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||| ||||||| | ||||| ||||| |||||||||| |||||||||||    
T  48207815 ttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtc 48207758  T

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Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29833390 - 29833466
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    |||||||||||| || ||||| | ||||||||||| |||||| ||| ||||||||||||| || ||||  |||||||    
T  29833390 ttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgtt 29833466  T

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Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 96779 - 96720
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||  ||||||| | |||||||||||||||||||||| | || ||||||||    
T  96779 ttaacttattttatgttttcactttggtcccctaactataaagtgtcttaaattggtccc 96720  T

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Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 526817 - 526758
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| ||||||| || ||||| | |||||||||||||||||||||| |||| ||||||||    
T  526817 ttaatttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtccc 526758  T

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Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 937196 - 937137
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| ||||||| || ||||| | |||||||||||||||||||||| ||||||| |||||    
T  937196 ttaatttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtccc 937137  T

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Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2310880 - 2310821
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||||||||||||||| ||| |||||||||||||    
T  2310880 ttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtccc 2310821  T

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Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8510873 - 8510932
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||| ||||| |||| ||| |||||||||||||    
T  8510873 ttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccc 8510932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8516950 - 8516891
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||| ||||| |||| ||| |||||||||||||    
T  8516950 ttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccc 8516891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10403514 - 10403448
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||| | || |  | |||||||||||||| ||||||||||| |||||||||    
T  10403514 ttaacttatttttggttttcactttgatttc-taactataaagtgtatcaatttggtctcataaatct 10403448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26202484 - 26202421
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  26202484 ttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 26202421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 26393193 - 26393146
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    |||||||||||||| ||||||||||||||||| |||  ||||||||||    
T  26393193 taactataaagtgtctcaatttggtcccataactcttctgtcgtttac 26393146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26428674 - 26428733
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||| | ||||||||||||| |||| ||| |||||||||||||    
T  26428674 ttaacttatttttgaatttcagtttggtcccctaactttaaactgtctcaatttggtccc 26428733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26428943 - 26428884
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| |||||| |||||| |||| ||| |||||||||||||    
T  26428943 ttaacttatttttgaatttcaatttggtcctctaactttaaattgtctcaatttggtccc 26428884  T

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Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30672162 - 30672103
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||||||| ||||| |||||||| |||||||||||||    
T  30672162 ttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtccc 30672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39135608 - 39135549
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| |||||||||| ||||||| | ||||||||||| |||| ||| |||||||||||||    
T  39135608 ttaatttatttttggatttcaatttagtcccctaactttaaactgtctcaatttggtccc 39135549  T

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Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 47667197 - 47667259
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||| | | ||||| | |||||||||||||| ||||||||||| |||||    
T  47667197 ttaacttatttttggtttttattttggtctc-taactataaagtgtctcaatttggtctcataa 47667259  T

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Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 52880831 - 52880890
Alignment:
Q  1 ttaacttatttttgg-ttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || |||| | | |||||||||||||||||||||| ||||||||||||    
T  52880831 ttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtcc 52880890  T

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Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 52981248 - 52981189
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||| ||||||| | |||||||| |||||| |||||||||||  |||||||    
T  52981248 ttaacttatttttagttttcattttggtccccaaactatcaagtgtttcaaactggtccc 52981189  T

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Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39592387 - 39592329
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||| |||| |||||||    
T  39592387 ttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtcc 39592329  T

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Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 6140411 - 6140358
Alignment:
Q  48 tcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||| |||||| |||  |||||||||||||| ||||| ||||||||||    
T  6140411 tcaatttggttccataactcttctgtcgtttactattttggtcatttccgttag 6140358  T

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Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 28189393 - 28189332
Alignment:
Q  3 aacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||  ||||| | ||||||| ||||| ||||  ||||||||||||||||||||    
T  28189393 aacttatttttgaatttcattttggtcccttaactttaaatcgtttcaatttggtcccataa 28189332  T

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Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30441627 - 30441692
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||  ||||||| ||||||||||| | |||| ||| ||||||| ||||| |||||    
T  30441627 ttaacttatttttgaatttcaatttggtcccctaaatttaaactgtctcaatttagtcccctaaat 30441692  T

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Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30671012 - 30671065
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaattt 54  Q
    |||||||||||| || ||||| | ||||||| |||||||||||||| |||||||    
T  30671012 ttaacttattttcggatttcattttggtcccttaactataaagtgtctcaattt 30671065  T

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Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53177116 - 53177051
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||  ||||||| || || ||||||| |||| ||| ||||||||||||| |||||    
T  53177116 ttaacttatttttgaatttcaatttgatcacctaactttaaactgtctcaatttggtcccctaaat 53177051  T

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Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 48206178 - 48206278
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||| | | |||| || ||| ||||||||||||||||||| ||| |||| | |  |  ||||||||||| ||||| ||| |||||    
T  48206178 ttaatttatttttggtttttattttggttccttaattataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtcatttacgtta 48206277  T
Q  101 g 101  Q
    |    
T  48206278 g 48206278  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42632724 - 42632824
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| | ||| | |||||||    
T  42632724 ttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgtta 42632823  T
Q  101 g 101  Q
    |    
T  42632824 g 42632824  T

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Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 51825719 - 51825619
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| | |||||||    
T  51825719 ttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatccgtta 51825620  T
Q  101 g 101  Q
    |    
T  51825619 g 51825619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41386148 - 41386247
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| | | ||||||||||| ||||| | |||||||    
T  41386148 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcctctccgtta 41386247  T

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Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 42633984 - 42633895
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  42633984 ttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtc 42633895  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53808336 - 53808425
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||| |||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||    
T  53808336 ttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtc 53808425  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41387531 - 41387431
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| || |   ||||||||||| ||||| | |||||||    
T  41387531 ttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcctctccgtta 41387432  T
Q  101 g 101  Q
    |    
T  41387431 g 41387431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 54654064 - 54653964
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||| |||  |||||||||||||| ||||| | |||||||    
T  54654064 ttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgtta 54653965  T
Q  101 g 101  Q
    |    
T  54653964 g 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51401449 - 51401382
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  51401449 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatct 51401382  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8372714 - 8372648
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatc 67  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  8372714 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatc 8372648  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10987751 - 10987686
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  10987751 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 10987686  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11220756 - 11220667
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||  ||||| | |||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||| |||||    
T  11220756 ttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtc 11220667  T

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Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7820408 - 7820508
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | |||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||| || ||||| | |||||||    
T  7820408 ttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcctctccgtta 7820507  T
Q  101 g 101  Q
    |    
T  7820508 g 7820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32980550 - 32980450
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||  || ||||||||||| ||||| | |||||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  101 g 101  Q
    |    
T  32980450 g 32980450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13078049 - 13077966
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||||| |||||||| |||||| |||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  13078049 ttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgtttactatt 13077966  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39133035 - 39133094
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  39133035 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtccc 39133094  T

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Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 29536735 - 29536832
Alignment:
Q  4 acttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||| ||||| | || ||| ||||||||||||||| |||||||||||||||||||||  | |||||||||||| ||||| | ||||||||    
T  29536735 acttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgttag 29536832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8371238 - 8371338
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| ||||||||||  ||  |||||||||| ||||| | |||||||    
T  8371238 ttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgtta 8371337  T
Q  101 g 101  Q
    |    
T  8371338 g 8371338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11219448 - 11219548
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||||| ||| | |||  || ||||||||||| ||||| | |||||||    
T  11219448 ttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgtta 11219547  T
Q  101 g 101  Q
    |    
T  11219548 g 11219548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17350200 - 17350141
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  17350200 ttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtccc 17350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43101912 - 43101995
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    ||||||||||||||||||||| | |||||| |||| |||||||||| ||||||||||||||||| |||  ||||| ||||||||    
T  43101912 ttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactatt 43101995  T

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Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47808204 - 47808105
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||| || |||||||||||||| ||||||||||| |||||||||  |||||||| ||||| ||||| | |||||||    
T  47808204 ttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgtta 47808105  T

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Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47855436 - 47855337
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||  |||||||||||||| |||||||||||| ||||||||  || ||||||||||| ||||| | |||||||    
T  47855436 ttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgtta 47855337  T

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Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49122100 - 49122002
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||| | ||||| | |||||||||||||| ||||||||||| ||||| | |  || ||||||| ||| ||||||||||||||    
T  49122100 ttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttttccgtt 49122002  T

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Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19253099 - 19253002
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||| |||||||| |||||||||| |  || ||||||| ||| ||||| | ||||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgtt 19253002  T

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Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 54752634 - 54752723
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||  |||||||| | |||||||||||||||||||| ||||||||||||  || |||| ||| ||||||||||| |||||    
T  54752634 ttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttggtc 54752723  T

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Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19622023 - 19622090
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||| |||||||||||||||| | |||||||||||||||||||||| ||||||| ||| |||||||||    
T  19622023 ttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatct 19622090  T

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Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26799004 - 26798941
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||| |||||||||||||||||    
T  26799004 ttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataa 26798941  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47767048 - 47766986
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| |||||||||||||||||    
T  47767048 ttaacttatttttggttttcattttggtccc-taactataaagtgtctcaatttggtcccataa 47766986  T

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Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 10986675 - 10986753
Alignment:
Q  6 ttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||||||||| |||||| | | | |||||||||||    
T  10986675 ttatttttggttttcactttggtccattaactataaagtgtttcaatttggtcctataaattttacgccgtttactatt 10986753  T

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Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25583132 - 25583221
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||| |||||| | ||||||||||||||| ||  || ||||||||||||||||| |||  || ||||||||||| |||||    
T  25583132 ttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtc 25583221  T

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Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36626749 - 36626838
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||   ||| |||| ||||  ||||||||| |||||||||||||||||||| ||||||| |||||||||||| || |||||    
T  36626749 ttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggtc 36626838  T

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Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51400233 - 51400298
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||| | || | ||||||||||||||||| ||||||| |||||||||||    
T  51400233 ttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaat 51400298  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39288537 - 39288461
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| ||||||||||||| ||  ||| ||||||||    
T  39288537 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgtt 39288461  T

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Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32973157 - 32973216
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  32973157 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 32973216  T

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Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32974321 - 32974262
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  32974321 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 32974262  T

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Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 43345362 - 43345437
Alignment:
Q  26 ggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||| |||||||||| |||||||||||||||||||||||||  | |||||||| ||| |||| || ||||||||    
T  43345362 ggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttag 43345437  T

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Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48035422 - 48035363
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  48035422 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48035363  T

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Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48252951 - 48253014
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||||||||| || ||||| | | |||||||||||||||||||||| |||||||||||||||||    
T  48252951 ttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataa 48253014  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53047915 - 53047974
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  53047915 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 53047974  T

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Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 2124061 - 2124147
Alignment:
Q  15 gttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||| ||| |||| ||||||||||||| | | | ||||||||||||||||||| ||| ||||||||||| ||||| | ||||||||    
T  2124061 gtttttaatttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgttag 2124147  T

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Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52293621 - 52293563
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| ||||||||||||    
T  52293621 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 52293563  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53342734 - 53342792
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| ||||||||||||    
T  53342734 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 53342792  T

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Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2225122 - 2225065
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||||||    
T  2225122 ttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 2225065  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 52705404 - 52705347
Alignment:
Q  3 aacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 52705347  T

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Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25585931 - 25585831
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| ||||||||  |||||| |||||||| |||||||| ||  || ||||||||||| |||||||||  |||||||||||||| | ||| | |||||||    
T  25585931 ttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttactattttagtcatctccgtta 25585832  T
Q  101 g 101  Q
    |    
T  25585831 g 25585831  T

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Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5416216 - 5416275
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||| |||||||||||||    
T  5416216 ttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtccc 5416275  T

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Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17345329 - 17345396
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||||||||||   |||||||||||||| ||||| | |||||||||| || |||||||    
T  17345329 ttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatct 17345396  T

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Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19579392 - 19579333
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||||||| |||||||||||||| |||||||||||||    
T  19579392 ttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtccc 19579333  T

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Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35174480 - 35174381
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   |||||| | ||||||| ||||||| |||||||||||  ||||||||||| |||  | |||||||||||| ||||| |||| ||||    
T  35174480 ttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtta 35174381  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39287488 - 39287547
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||| ||||||||||||||| |||||||||||||    
T  39287488 ttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtccc 39287547  T

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Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47806836 - 47806903
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||| ||||| | ||||||| ||| |||||||||| |||||||| ||| ||||||||    
T  47806836 ttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatct 47806903  T

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Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52292612 - 52292671
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| ||||||| |||||    
T  52292612 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtccc 52292671  T

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Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53049135 - 53049076
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| |||||||||||||    
T  53049135 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 53049076  T

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Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 55443648 - 55443589
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||||||||||||||||||| |||||||||||||    
T  55443648 ttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 55443589  T

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Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33563967 - 33564021
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttg 55  Q
    ||||||||||||||| ||||| | | |||||||||||||||||||| ||||||||    
T  33563967 ttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

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Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7583488 - 7583545
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||||| | |||||| ||||||||||||||| |||||||||||    
T  7583488 ttaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtc 7583545  T

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Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38639036 - 38639093
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| | |||||| | ||||||| ||||||||||||||||| ||||||||    
T  38639036 ttaacttattttagtttttcagtttggtcccttaactataaagtgtttcgatttggtc 38639093  T

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Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12062482 - 12062382
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   |||||| | ||||||| ||||||| |||||| ||||||||||||||| | |||  ||  |||||||||| ||||| ||||| |||    
T  12062482 ttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttccatta 12062383  T
Q  101 g 101  Q
    |    
T  12062382 g 12062382  T

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Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23559861 - 23559937
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| ||| ||| |||||| |||||||| |||||||| |||  |||||||||||||| ||||| | ||||||||    
T  23559861 tggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttag 23559937  T

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Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5417146 - 5417087
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||  ||||||||    
T  5417146 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcagattggtccc 5417087  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19623017 - 19622958
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||| ||||||| | ||||| |||||||||||||||| ||||  |||||||    
T  19623017 ttaacttattttttgttttcactttggtctcctaactataaagtgtctcaaactggtccc 19622958  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 35173192 - 35173259
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttc 95  Q
    |||| ||||||| |||| ||||||||||||| ||||| |||  |||||||||||||| ||||| ||||    
T  35173192 tcccttaactattaagtatttcaatttggtctcataactcttttgtcgtttactattttggtcatttc 35173259  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51214264 - 51214201
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  51214264 ttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 51214201  T

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Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19579238 - 19579296
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||  | ||||| | |||||||||||||||||| ||| ||||||||||||    
T  19579238 ttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtcc 19579296  T

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Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 21127975 - 21128040
Alignment:
Q  33 taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgt 98  Q
    ||||||| |||||| ||||||||||||||||| |||  || ||||||| ||| ||||| |||||||    
T  21127975 taactattaagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttccgt 21128040  T

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Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 32979130 - 32979171
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||||| ||||||||||||||| |||||||| ||||||||||    
T  32979130 tggtcctctaactataaagtgtctcaatttgatcccataaat 32979171  T

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Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40502313 - 40502260
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaattt 54  Q
    ||||||||||||||| ||| | | |||||||||||||||||||| | |||||||    
T  40502313 ttaacttatttttggattttattttggtcccctaactataaagtatctcaattt 40502260  T

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Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48867528 - 48867467
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccat 62  Q
    ||||||||||||   || ||||| ||||||| ||||||| |||||| |||||||||||||||    
T  48867528 ttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcccat 48867467  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42570030 - 42570082
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatt 53  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| ||||||    
T  42570030 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatt 42570082  T

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Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43103394 - 43103294
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  |||| | | || ||||||||||| ||| | | ||||||||||  ||||||| |  || ||||||||||| ||||| |||||||||    
T  43103394 ttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttactattttggtcctttccgtta 43103295  T
Q  101 g 101  Q
    |    
T  43103294 g 43103294  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 49334432 - 49334352
Alignment:
Q  4 acttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||| ||||||| | ||||||  |||||||||| ||| ||||| |||||| ||||||||  |  |||||||||||    
T  49334432 acttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactatt 49334352  T

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Target: scaffold2127 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 613 - 513
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  ||||||||| ||| ||||||||||| ||||| | |||||||    
T  613 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 514  T
Q  101 g 101  Q
    |    
T  513 g 513  T

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Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2581822 - 2581921
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||  ||||| | ||||||||    
T  2581822 taacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgttag 2581921  T

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Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12852904 - 12853004
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||| |||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||| ||||| | |||||||    
T  12852904 ttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgtta 12853003  T
Q  101 g 101  Q
    |    
T  12853004 g 12853004  T

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Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7036984 - 7037082
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||| ||||| | | ||||| |||||||||||||||||||||||||||||||| |||  || ||||||| ||| ||||| ||||||||    
T  7036984 ttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtt 7037082  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6706944 - 6707033
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||| ||||||||||  |  ||||||||||| |||||    
T  6706944 ttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtc 6707033  T

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Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12958434 - 12958499
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||    
T  12958434 ttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaat 12958499  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23177691 - 23177792
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccc-taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||  || ||||||| ||| ||||| | ||||||    
T  23177691 ttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgtt 23177790  T
Q  100 ag 101  Q
    ||    
T  23177791 ag 23177792  T

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Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23588948 - 23589049
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccc-taactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||  || ||||||| ||| ||||| | ||||||    
T  23588948 ttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgtt 23589047  T
Q  100 ag 101  Q
    ||    
T  23589048 ag 23589049  T

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Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37867774 - 37867839
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||    
T  37867774 ttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaat 37867839  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15650459 - 15650559
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||  || | ||| |||||||||||||||||||||| ||||||||||  | ||||||| ||||||||||||||| ||||| | |||||||    
T  15650459 ttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttactattttggtcatctccgtta 15650558  T
Q  101 g 101  Q
    |    
T  15650559 g 15650559  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 21012174 - 21012078
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||||| ||||||| | || |||||||||||||||||||||||||||||||||  ||||||   ||||||||||||| ||||| | ||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttag 21012078  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23178980 - 23178880
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | |||||||||||||||||| ||||| || ||||||||||||||||   |||||||| |||| ||||| | |||||||    
T  23178980 ttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctccgtta 23178881  T
Q  101 g 101  Q
    |    
T  23178880 g 23178880  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23590237 - 23590137
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | |||||||||||||||||| ||||| || ||||||||||||||||   |||||||| |||| ||||| | |||||||    
T  23590237 ttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctccgtta 23590138  T
Q  101 g 101  Q
    |    
T  23590137 g 23590137  T

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Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42029056 - 42028956
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||| ||||||||||||||| | |||||  ||||||||||||||| || |||||||||||||| |||  ||||| |||||||| ||||||| |||||||    
T  42029056 ttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttggtcttctccgtta 42028957  T
Q  101 g 101  Q
    |    
T  42028956 g 42028956  T

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Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35799530 - 35799593
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||    
T  35799530 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataa 35799593  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 2583643 - 2583577
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||    
T  2583643 taacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatct 2583577  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37869138 - 37869040
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| ||||||| ||| ||||| |||  ||||||||||  || ||||||| ||||||    
T  37869138 ttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctccgtt 37869040  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4829483 - 4829572
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||| ||||||| | | ||||| |||||||||| ||| |||||||| || ||||||||| ||||||||||||||| |||||    
T  4829483 ttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtc 4829572  T

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Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6209162 - 6209063
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||  ||||||||||||||| | ||||||||||||||| |||  |||||||||||||| ||||||| | |||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattct-ttgtcgtttactattttggtcttcttcgtta 6209064  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11386642 - 11386706
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaa 65  Q
    ||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||| |||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaa 11386706  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42246609 - 42246709
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||| ||||||||||||| | || |||||||| ||||||||||||||||||| |||||||| |||  |  ||||||||||| ||||| ||| |||||    
T  42246609 ttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtccttttcgtta 42246708  T
Q  101 g 101  Q
    |    
T  42246709 g 42246709  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1625073 - 1624975
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | || || | |||||||||||||| |||||||||||| |||||||| ||| | ||||||||| ||||||| |||||||    
T  1625073 ttaacttatttttggatttcattttgatctc-taactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgtta 1624975  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7038430 - 7038367
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||    
T  7038430 ttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

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Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12854202 - 12854135
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||| | ||||| | ||||||| |||||||||||||| |||||||||||||||||||||    
T  12854202 ttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatct 12854135  T

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Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 14509251 - 14509326
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||  |||||||||||||| ||||| | |||||||    
T  14509251 tggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgtta 14509326  T

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Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29424710 - 29424651
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||    
T  29424710 ttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtccc 29424651  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42368406 - 42368343
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||| || ||||||||||||||    
T  42368406 ttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3255976 - 3255919
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||    
T  3255976 ttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtc 3255919  T

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Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10368483 - 10368418
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||| |||||||| ||||||||||    
T  10368483 ttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaat 10368418  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41796050 - 41795989
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccat 62  Q
    |||||||||||||| |||||| | || ||||||||||||||||||| |||||||||||||||    
T  41796050 ttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

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Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42027211 - 42027311
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||| |||||| | |||||| ||||||| ||| ||| ||||||||||||||||||| |  ||  |||||||| | ||||| |||||||||    
T  42027211 ttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtcctttccgtta 42027310  T
Q  101 g 101  Q
    |    
T  42027311 g 42027311  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2305558 - 2305617
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||| | || ||||||||||||||||||| |||||||||||||    
T  2305558 ttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtccc 2305617  T

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Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22653125 - 22653066
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  22653125 ttaacttatttttggatttcaatatggtcccctaactttaaactgtctcaatttggtccc 22653066  T

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Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11575553 - 11575500
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaattt 54  Q
    ||||||||||||||||||| | | |||||||||||||||||| |||||||||||    
T  11575553 ttaacttatttttggttttaattttggtcccctaactataaaatgtttcaattt 11575500  T

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Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33836787 - 33836844
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||    
T  33836787 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 33836844  T

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Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 3533700 - 3533624
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| ||||||| |||||| ||||||||||| |||||||||  ||||||||||||||  | || ||||||||||    
T  3533700 tggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgtttactatttcgatcatttccgttag 3533624  T

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Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3665242 - 3665301
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||| ||||||||||| |||||||||||||||||    
T  3665242 ttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtccc 3665301  T

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Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3666366 - 3666307
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||||||| |||||||||||||| |||||||||||||    
T  3666366 ttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 3666307  T

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Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12959803 - 12959736
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||||| |||| ||| ||||||| |||| ||||||||| ||||||| |||| ||||||||    
T  12959803 ttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatct 12959736  T

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Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17179349 - 17179290
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  17179349 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtccc 17179290  T

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Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28109967 - 28109904
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| ||||||||| ||||| | |||| ||||||| | |||||||||||||||||    
T  28109967 ttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataa 28109904  T

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Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30202981 - 30202922
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||| ||||    
T  30202981 ttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttgatccc 30202922  T

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Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 40174821 - 40174762
Alignment:
Q  42 agtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||||||||||||||||||||||||  ||| |||||||||| ||||| | ||||||||    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttag 40174762  T

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Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4630182 - 4630125
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||  | ||||| | |||||||||||||||||||||| |||||||||||    
T  4630182 ttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtc 4630125  T

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Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 22900216 - 22900269
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||| ||||||| ||||||||||||| |||| ||| |||||||||||    
T  22900216 cttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 22900269  T

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Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 7490257 - 7490193
Alignment:
Q  37 tataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    |||||| ||| |||||||||||||||||||||  | | |||||||||| ||||||| ||||||||    
T  7490257 tataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttag 7490193  T

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Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 32614418 - 32614482
Alignment:
Q  16 ttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    |||||| | ||||||||||||||| | |||||||||||| || |||||| ||| |||||||||||    
T  32614418 ttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttac 32614482  T

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Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5564077 - 5564136
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||| | ||||||| ||| |||||||||| |||||||||||||    
T  5564077 ttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5564136  T

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Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5565243 - 5565184
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||| | ||||||| ||| |||||||||| |||||||||||||    
T  5565243 ttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5565184  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10367257 - 10367320
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||||||||||||| |||||||| ||||  | |||||||||||||| ||||||| ||| |||||    
T  10367257 ttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataa 10367320  T

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Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17179078 - 17179137
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||| ||| ||||||||||||| |||| ||| |||||||||||||    
T  17179078 ttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtccc 17179137  T

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Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20948420 - 20948479
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||| ||||| |||| ||| |||||||||||||    
T  20948420 ttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccc 20948479  T

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Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27264671 - 27264608
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  27264671 ttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

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Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30202711 - 30202770
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||| ||||    
T  30202711 ttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttgatccc 30202770  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43015557 - 43015620
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  43015557 ttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 43015620  T

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Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2306758 - 2306701
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    |||||||||||| || ||||| | ||||||||||||| |||||||| ||||||||||||    
T  2306758 ttaacttatttt-ggatttcattttggtcccctaactgtaaagtgtctcaatttggtcc 2306701  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 38801295 - 38801237
Alignment:
Q  2 taacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||||  ||||||| ||||||||||||| |||| ||| |||| ||||||||    
T  38801295 taacttatttttgcatttcaatttggtcccctaactttaaattgtctcaaattggtccc 38801237  T

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Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10477360 - 10477417
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| ||||| | ||||| | ||| |||||||||| |||||||||||    
T  10477360 ttaacttatttttggatttcattttggtctcttaattataaagtgtctcaatttggtc 10477417  T

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Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14573906 - 14573861
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgt 46  Q
    ||||| ||||||||| ||||| | ||||||||||||||||||||||    
T  14573906 ttaacatatttttggatttcattttggtcccctaactataaagtgt 14573861  T

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Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 15268984 - 15268931
Alignment:
Q  215 ataaattgaacagccttctctctctatctccatcaacaacaacaatttcctcat 268  Q
    ||||||| |||| |||||| ||| ||||| ||||||||||||||||||| ||||    
T  15268984 ataaatttaacaaccttctttctatatcttcatcaacaacaacaatttcttcat 15268931  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3528363 - 3528287
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    |||| ||||||||| |||| ||| ||||| |  ||||||||||||||| || |||||| |||||||||  |||||||    
T  3528363 ttaatttatttttgatttttaatttggtcgctcaactataaagtgttttaagttggtctcataaatcttttgtcgtt 3528287  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 15268517 - 15268609
Alignment:
Q  127 ttaacctttgccacgtgt-agttataattggtgatcaaaggttgaatttgaatagcgcacacaagtatacaatacaccgacgacatatgataa 218  Q
    |||||||||||||||||| | || | |||||||||||| || ||||||| || | | |||||||| |||||||| ||  || |||||||||||    
T  15268517 ttaacctttgccacgtgtcatttgtgattggtgatcaagggctgaattttaaaaacacacacaaggatacaatagactcacaacatatgataa 15268609  T

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Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 35801116 - 35801084
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| ||||||||||||||||||||||||||||    
T  35801116 tcccttaactataaagtgtttcaatttggtccc 35801084  T

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Target: scaffold0178 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2363 - 2263
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |||  |   |||||||||| ||||| |||||||||    
T  2363 ttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttccgtta 2264  T
Q  101 g 101  Q
    |    
T  2263 g 2263  T

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Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1230 - 1286
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    |||||||||||||||||| || | ||||||||||| |||||||| | |||||||||||    
T  1230 ttaacttatttttggttt-cattttggtcccctaattataaagtctctcaatttggtc 1286  T

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Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18677994 - 18678073
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttac 80  Q
    ||||||||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  18677994 ttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttac 18678073  T

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Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26403325 - 26403416
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtctt 92  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||||||| || ||||||| | ||||||||||||||| |||||||    
T  26403325 ttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtctt 26403416  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12936200 - 12936102
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| |||| ||| |||  |||||| ||| ||||| ||||||||    
T  12936200 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcatttccgtt 12936102  T

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Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27894121 - 27894028
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtctttt 94  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||| |   ||||||||||||| |||| ||||    
T  27894121 ttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggtttttt 27894028  T

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Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5382960 - 5383060
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||||||||||||||||| || ||||| ||||| |||||||||| |||||||||||||||||||||   ||||||||||||| || || | |||||||    
T  5382960 ttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgtta 5383059  T
Q  101 g 101  Q
    |    
T  5383060 g 5383060  T

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Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19827238 - 19827171
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  19827238 ttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatct 19827171  T

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Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12950358 - 12950260
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||| ||| |||  |||||| ||| ||||| ||||||||    
T  12950358 ttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttggtcatttccgtt 12950260  T

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Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19525386 - 19525288
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||| |||  || ||||||| ||| ||||| | ||||||    
T  19525386 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctccgtt 19525288  T

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Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5384444 - 5384344
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||||||     ||||||||||| ||||| | |||||||    
T  5384444 ttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgtta 5384345  T
Q  101 g 101  Q
    |    
T  5384344 g 5384344  T

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Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 15857692 - 15857616
Alignment:
Q  25 tggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgttag 101  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||| | ||||||||    
T  15857692 tggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttag 15857616  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15613523 - 15613622
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | |||||  ||||||||||||||| |||||||||||||||||||||  |  ||||||||||| ||||| | |||||||    
T  15613523 ttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtta 15613622  T

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Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12947930 - 12948028
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||||||||||||| |||||| | || ||||||||||||||||||| |||||||| || ||||| ||| ||||||||||| |||  |||| ||||||||    
T  12947930 ttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtcctttccgtt 12948028  T

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Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19524001 - 19524098
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| | |||||| |  |||||||||| ||| ||||| | ||||||    
T  19524001 ttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggt-ctataaattttctgtcgtttaccattttggtcatgtccgtt 19524098  T

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Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 42979471 - 42979564
Alignment:
Q  6 ttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    |||||||||| ||||| | |||||| |||||||||||||||||||||||||||| |||| |||  || ||||||||||| ||||| | ||||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgtt 42979564  T

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Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1663205 - 1663304
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | || |||  |||||||||||||| | |||||||||| ||||||||  || ||||||||||| ||||||| |||||||    
T  1663205 ttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggtcttctccgtta 1663304  T

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Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8762498 - 8762415
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactatt 84  Q
    |||||||||||||  |||||||| ||||||| | |||||||| ||| ||||||||||| ||||||| | |||||||||||||||    
T  8762498 ttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttactatt 8762415  T

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Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21387655 - 21387722
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||  ||||| | |||||||||||||||||| ||| |||||||||||||||||||||    
T  21387655 ttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatct 21387722  T

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Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12933769 - 12933867
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtt 99  Q
    ||||||||||||||||||||| | || ||||||||||||||||||| |||||||| || ||||| |||  || ||||||| |||  |||| ||||||||    
T  12933769 ttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtcctttccgtt 12933867  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7345488 - 7345423
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaat 66  Q
    ||||||||||||||  ||||| | |||||| ||||||||||||||| |||||||||||||||||||    
T  7345488 ttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaat 7345423  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 15615054 - 15614969
Alignment:
Q  5 cttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||| ||||| | |||||| ||||||||||||||| |||||||||| |||||||| |  || ||||||||||| |||||    
T  15615054 cttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtc 15614969  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26404308 - 26404219
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||| |||||| || |||| ||| ||||||  |||||||||||||| |||||||| |||||||||||| ||||| ||||||||| |||||    
T  26404308 ttaatttatttatgatttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtc 26404219  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 42510147 - 42510220
Alignment:
Q  16 ttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||||||||  || ||||||||||| ||||    
T  42510147 ttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggt 42510220  T

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Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10085943 - 10085843
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | ||||| | ||||| ||||||||||||||||||||||||||||||  ||   ||||||||| ||||| | |||||||    
T  10085943 ttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctctccgtta 10085844  T
Q  101 g 101  Q
    |    
T  10085843 g 10085843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 38473622 - 38473554
Alignment:
Q  32 ctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||||| |||||||| | |||||||||||||||||||  |||||||||||||| ||||| |||||||||    
T  38473622 ctaactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgtta 38473554  T

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Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40058036 - 40058136
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | || |||| ||||||| ||||||||||| |||||| ||||| |||  || ||||||| ||| ||||| | |||||||    
T  40058036 ttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtta 40058135  T
Q  101 g 101  Q
    |    
T  40058136 g 40058136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 224688 - 224625
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||  ||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  224688 ttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataa 224625  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 326362 - 326429
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||||||||||| || ||||  ||||||||||||| ||||||||||  |||||||||    
T  326362 ttaacttatttttggttttcaatttgatccctcaactataaagtgtctcaatttggttgcataaatct 326429  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1273107 - 1273174
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||| |||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||||||||||    
T  1273107 ttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatct 1273174  T

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Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4568072 - 4568013
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  4568072 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 4568013  T

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Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19050767 - 19050826
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  19050767 ttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtccc 19050826  T

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Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22650726 - 22650667
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 22650667  T

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Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18695745 - 18695645
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatc-tcatgtcgtttactattatggtcttttccgtt 99  Q
    |||| |||||||||||||||| | |  |||| |||||||||||||| ||||||||||||||||| || ||||  ||||||||| ||||||| | ||||||    
T  18695745 ttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcat-ccgtttactaatatggtcatctccgtt 18695647  T
Q  100 ag 101  Q
    ||    
T  18695646 ag 18695645  T

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Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 223243 - 223307
Alignment:
Q  1 ttaacttatttttggttttcaa-tctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||| |||||| | | |||||||||||||||||||||| | |||||||||||||||    
T  223243 ttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataa 223307  T

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Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32734150 - 32734249
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||   |||||| | ||||||| ||||||| | |||| | ||||||||||||||| |||  |||||||||||||| ||||| |||||||||    
T  32734150 ttaacttattttattttttcagtttggtcccttaactatta-gtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgtta 32734248  T

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Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38471307 - 38471395
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| |||||||||||||| ||||||||||  |  ||||||||||| ||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggt 38471395  T

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Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1273438 - 1273383
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttgg 56  Q
    ||||||||||||||||||||| | ||||||| ||| |||||||||| |||||||||    
T  1273438 ttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

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Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5061046 - 5061105
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||| | |||||||||||  ||||||||| |||||||||||||    
T  5061046 ttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5061105  T

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Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15509213 - 15509272
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||| | | |||||||||||||||||||||| |||||||||||||    
T  15509213 ttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 15509272  T

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Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15510361 - 15510302
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | || ||||||||||||||||||| |||||||||||||    
T  15510361 ttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtccc 15510302  T

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Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40059426 - 40059363
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | || |||||||||||| |||||||| || ||||||| ||||    
T  40059426 ttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataa 40059363  T

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Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6629749 - 6629799
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaa 51  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||| ||||    
T  6629749 ttaacttatttgtggttttcactttggtcccctaactataaagtgtctcaa 6629799  T

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Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 641976 - 641919
Alignment:
Q  3 aacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||| | ||||||| ||||||||||||| |||| ||| |||||||||||||    
T  641976 aacttatttttagatttcaatttggtcccctaactttaaactgtctcaatttggtccc 641919  T

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Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15154165 - 15154108
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||||||    
T  15154165 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtc 15154108  T

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Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22819647 - 22819558
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    ||||||||||||   || ||||| || |||| ||||||| |||||| ||||||||||||||||| |||  || ||||||||||| |||||    
T  22819647 ttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

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Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41905193 - 41905234
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaa 42  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  41905193 ttaacttatttttggttttcattttggtcccctaactataaa 41905234  T

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Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 328252 - 328212
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataa 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  328252 ttaacttattttttgttttcaatttggtcccctaactataa 328212  T

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Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18693716 - 18693792
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtt 77  Q
    ||||||||||||||  ||| | | ||||||| |||||||||| ||| ||||| |||||||||||||||  |||||||    
T  18693716 ttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgtt 18693792  T

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Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4566969 - 4567028
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||| |||||| || ||||| | || ||||||||||||||||||| |||||||||||||    
T  4566969 ttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtccc 4567028  T

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Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5062284 - 5062225
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||| | |||||||||||  ||||||||| |||||||||||||    
T  5062284 ttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5975774 - 5975837
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    |||||||||||||  |||| | | ||||||||||| |||||||||| ||||||||||| |||||    
T  5975774 ttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataa 5975837  T

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Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19051037 - 19050978
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||| |||||||| ||||    
T  19051037 ttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttgatccc 19050978  T

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Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20991747 - 20991688
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||| |||||||||||||| ||| |||||||||||||    
T  20991747 ttaacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtccc 20991688  T

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Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32411982 - 32412041
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||| ||| |||| ||||||||    
T  32411982 ttaacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtccc 32412041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32522020 - 32521961
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| ||||||| || ||||| | |||||||||||||||| ||||| |||||||||||||    
T  32522020 ttaatttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtccc 32521961  T

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Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37371075 - 37371138
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||| |||| ||| |||||||||||||||||    
T  37371075 ttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 37371138  T

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Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37371281 - 37371218
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||  ||||| | ||||||| ||||||||||  || |||||||||||||||||    
T  37371281 ttaacttatttttgaatttcattttggtcccttaactataaaccgtctcaatttggtcccataa 37371218  T

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Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42980807 - 42980708
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||| | ||||| | ||||||  |||||||||||||| ||||||||||| |||| ||||  || | ||||| ||| ||||| |||||||||    
T  42980807 ttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgtta 42980708  T

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Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 2167572 - 2167522
Alignment:
Q  41 aagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtct 91  Q
    ||||||||||||||||||||||||||||  || |||||| |||| ||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtct 2167522  T

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Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32521704 - 32521758
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttg 55  Q
    ||||||||||||| | ||| | | |||||||||||||||||||||| ||||||||    
T  32521704 ttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttg 32521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19825892 - 19825929
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaacta 38  Q
    ||||||||||||||||||||||| || |||||||||||    
T  19825892 ttaacttatttttggttttcaatttgatcccctaacta 19825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20988708 - 20988761
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaattt 54  Q
    |||||||||||| |  ||||| | |||||||||||||||||||||| |||||||    
T  20988708 ttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaattt 20988761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21389239 - 21389141
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | |  |||| |||||||  ||||| ||||||||||||||||| |||     ||||||||| ||||||| | |||||||    
T  21389239 ttaacttatttttggttttcatttttttcccttaactat--agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgtta 21389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22812485 - 22812396
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||||||||||||  |||||| | | ||||| |||||||||| ||| ||| |||| ||||||||||||  ||  |||||||||| |||||    
T  22812485 ttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtc 22812396  T

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Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 36206976 - 36206932
Alignment:
Q  215 ataaattgaacagccttctctctctatctccatcaacaacaacaa 259  Q
    |||||||||||| |||||| | ||||||| |||||||||||||||    
T  36206976 ataaattgaacaaccttctttttctatcttcatcaacaacaacaa 36206932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 42511749 - 42511697
Alignment:
Q  16 ttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||| | ||||||| |||||||||||||| |||||||| | ||||||||||    
T  42511749 ttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatct 42511697  T

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Target: scaffold1974 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 726 - 626
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||| ||| | |||||||||||||||||||||| ||||||| |||||||||||||  || ||||||| ||| ||||| | |||||||    
T  726 ttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgtta 627  T
Q  101 g 101  Q
    |    
T  626 g 626  T

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Target: scaffold1878 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 548 - 648
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||| ||| | |||||||||||||||||||||| ||||||| |||||||||||||  || ||||||| ||| ||||| | |||||||    
T  548 ttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgtta 647  T
Q  101 g 101  Q
    |    
T  648 g 648  T

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Target: scaffold0290 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9576 - 9476
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||| ||| | |||||||||||||||||||||| ||||||| |||||||||||||  || ||||||| ||| ||||| | |||||||    
T  9576 ttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgtta 9477  T
Q  101 g 101  Q
    |    
T  9476 g 9476  T

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Target: scaffold0290; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8397 - 8497
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||||||||| | || ||||||||||||||| ||| |||| ||||||||||||||||   ||| |||||||||  |||| | |||||||    
T  8397 ttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggtcatctccgtta 8496  T
Q  101 g 101  Q
    |    
T  8497 g 8497  T

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Target: scaffold0051 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39999 - 39932
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||||||||||||| ||||| | ||||||||||| |||||||||| |||||||||||||||||||||    
T  39999 ttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatct 39932  T

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Target: scaffold0051; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22176 - 22244
Alignment:
Q  32 ctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||| ||| |||||||| || |||||||||  |||||||||||||| ||||| | |||||||    
T  22176 ctaactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgtta 22244  T

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Target: scaffold0046 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23424 - 23487
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||    
T  23424 ttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 23487  T

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Target: scaffold0046; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24913 - 24854
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  24913 ttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtccc 24854  T

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Target: scaffold0045 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 77279 - 77180
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||| |||||||||||||||||||||| |  |  |||||||| || ||||||| |||||||    
T  77279 ttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtcttctccgtta 77180  T

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Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 145967 - 145868
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    |||| |||||||||||||||||| |  ||||||||||||||| ||| | |||||||||| |||||||| ||| ||||||||||| ||||| | |||||||    
T  145967 ttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttggtcatctccgtta 145868  T

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Target: scaffold0084 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13302 - 13239
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataa 64  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| ||||||| |||||||||    
T  13302 ttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataa 13239  T

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Target: scaffold0084; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11724 - 11783
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||||  |||||| | | ||||||||| ||||||||||||||||||||||||    
T  11724 ttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtccc 11783  T

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Target: scaffold0013 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 96178 - 96245
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    |||||||||||| | |||||||| |||||||||||||||||||||| |||||||| ||| ||||||||    
T  96178 ttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatct 96245  T

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Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 96913 - 96855
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcc 59  Q
    ||||||||||||||||||||||| || ||||||||| ||||| ||| ||||||||||||    
T  96913 ttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtcc 96855  T

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Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 56798 - 56718
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttact 81  Q
    ||||||||||||| | ||||| | ||||||||||| |||||||||| |||||||||||| ||||||||  || ||||||||    
T  56798 ttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttact 56718  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54609 - 54676
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatct 68  Q
    ||||| || |||||||||| | | ||||||  ||| |||||||||| |||||||||||||||||||||    
T  54609 ttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatct 54676  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 48554 - 48455
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||| ||||| | ||||||  |||||||||||||| |||||||| |||||||||| |  || |||||||| || ||||| | |||||||    
T  48554 ttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgtta 48455  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47088 - 47187
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtcttttccgtta 100  Q
    ||||||||||||||  ||||| | || |||| ||||| |||| ||| |||||||||||||||||||||  |  ||||||||||| ||||| | |||||||    
T  47088 ttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtta 47187  T

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Target: scaffold0369 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12928 - 13016
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggt 89  Q
    |||||||||||||| |||| | | ||||||| ||| |||||||||| ||||||||||| ||||||| |  ||||||||| |||| ||||    
T  12928 ttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttagtattttggt 13016  T

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Target: scaffold0177 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1773 - 1832
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | ||||||||||| |||||||||| |||||||||||||    
T  1773 ttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtccc 1832  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25940 - 25999
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| |  ||||| | |||||||||||||||||||||| |||||||||||||    
T  25940 ttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 25999  T

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Target: scaffold0038; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27014 - 26955
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtccc 60  Q
    |||||||||||| || ||||| | |||||||||||||||||||||| |||||||| ||||    
T  27014 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccc 26955  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5187 - 5244
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgtttcaatttggtc 58  Q
    ||||||||||||||| |||   | |||||||||||||||||||||| |||||||||||    
T  5187 ttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtc 5244  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 73084 - 73039
Alignment:
Q  1 ttaacttatttttggttttcaatctggtcccctaactataaagtgt 46  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||    
T  73084 ttaacttatttttggttttcactttggtcccctaacaataaagtgt 73039  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 42417 - 42355
Alignment:
Q  28 tcccctaactataaagtgtttcaatttggtcccataaatctcatgtcgtttactattatggtc 90  Q
    |||| ||||||| | |||| |||||||| ||||||||||||  |||||||||||||| |||||    
T  42417 tcccttaactattacgtgtatcaatttgatcccataaatcttctgtcgtttactattttggtc 42355  T

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