View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2891_high_5 (Length: 256)

Name: NF2891_high_5
Description: NF2891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2891_high_5
NF2891_high_5
[»] chr1 (58 HSPs)
chr1 (1-246)||(23703512-23703764)
chr1 (81-142)||(21246705-21246766)
chr1 (81-142)||(44432057-44432118)
chr1 (5-120)||(1799594-1799717)
chr1 (81-142)||(1799020-1799081)
chr1 (1-122)||(21247337-21247466)
chr1 (1-142)||(46294607-46294756)
chr1 (1-142)||(16834533-16834680)
chr1 (81-122)||(16835255-16835296)
chr1 (81-142)||(19076172-19076233)
chr1 (81-142)||(19124062-19124123)
chr1 (5-135)||(23703195-23703331)
chr1 (81-122)||(39365094-39365135)
chr1 (81-122)||(42774973-42775014)
chr1 (81-122)||(44431440-44431481)
chr1 (81-122)||(16798049-16798090)
chr1 (81-122)||(25376985-25377026)
chr1 (81-122)||(29487540-29487581)
chr1 (1-45)||(26615690-26615734)
chr1 (1-45)||(27134438-27134482)
chr1 (1-44)||(9033735-9033778)
chr1 (1-44)||(38623726-38623769)
chr1 (84-122)||(45141727-45141765)
chr1 (5-122)||(46295315-46295440)
chr1 (1-42)||(49216873-49216914)
chr1 (1-45)||(8742522-8742566)
chr1 (1-45)||(10373706-10373750)
chr1 (4-44)||(13698214-13698254)
chr1 (1-45)||(35156050-35156094)
chr1 (1-45)||(35392649-35392693)
chr1 (1-45)||(40116840-40116884)
chr1 (1-45)||(42233527-42233571)
chr1 (1-45)||(43505900-43505944)
chr1 (1-45)||(48731506-48731550)
chr1 (1-44)||(9034497-9034540)
chr1 (1-44)||(11707387-11707430)
chr1 (1-44)||(25376899-25376942)
chr1 (1-44)||(26537667-26537710)
chr1 (1-44)||(32814967-32815010)
chr1 (1-44)||(36723930-36723973)
chr1 (5-44)||(40315471-40315510)
chr1 (1-44)||(46585495-46585538)
chr1 (84-122)||(18806881-18806919)
chr1 (7-45)||(28297194-28297232)
chr1 (4-45)||(6783299-6783340)
chr1 (4-45)||(7287713-7287754)
chr1 (81-118)||(27234666-27234703)
chr1 (81-110)||(40315396-40315425)
chr1 (1-45)||(27235052-27235096)
chr1 (1-41)||(27326437-27326477)
chr1 (1-45)||(33740835-33740879)
chr1 (1-45)||(34557778-34557821)
chr1 (1-45)||(37613001-37613045)
chr1 (5-45)||(39365009-39365049)
chr1 (1-44)||(45141637-45141681)
chr1 (1-45)||(47985030-47985073)
chr1 (1-45)||(48803533-48803577)
chr1 (4-44)||(52869830-52869870)
[»] chr8 (30 HSPs)
chr8 (5-122)||(44308278-44308403)
chr8 (5-142)||(20832580-20832725)
chr8 (5-122)||(25990-26115)
chr8 (81-142)||(12502958-12503019)
chr8 (83-138)||(25631044-25631099)
chr8 (1-138)||(26697-26842)
chr8 (81-122)||(20831968-20832009)
chr8 (83-122)||(15565414-15565453)
chr8 (81-142)||(15564776-15564837)
chr8 (81-122)||(25630430-25630471)
chr8 (1-44)||(9263841-9263884)
chr8 (1-124)||(25094298-25094429)
chr8 (1-44)||(25631144-25631187)
chr8 (1-44)||(30729011-30729054)
chr8 (84-122)||(15730751-15730789)
chr8 (1-118)||(9879060-9879185)
chr8 (1-44)||(3177951-3177994)
chr8 (1-44)||(12764254-12764297)
chr8 (1-44)||(25630344-25630387)
chr8 (2-44)||(27071746-27071788)
chr8 (1-35)||(31819885-31819919)
chr8 (1-35)||(39864105-39864139)
chr8 (2-44)||(41575089-41575131)
chr8 (81-122)||(6869232-6869273)
chr8 (4-45)||(17925134-17925175)
chr8 (4-45)||(40450463-40450504)
chr8 (1-44)||(41450339-41450379)
chr8 (1-45)||(7482696-7482740)
chr8 (1-45)||(41450096-41450140)
chr8 (1-41)||(44671916-44671956)
[»] chr3 (49 HSPs)
chr3 (1-142)||(54602294-54602441)
chr3 (83-142)||(32750942-32751001)
chr3 (83-142)||(24782333-24782392)
chr3 (1-124)||(40065655-40065786)
chr3 (5-122)||(20411016-20411141)
chr3 (5-122)||(24782973-24783096)
chr3 (81-142)||(54627280-54627341)
chr3 (86-142)||(35234585-35234641)
chr3 (81-122)||(20819476-20819517)
chr3 (81-142)||(20820094-20820155)
chr3 (81-122)||(32751576-32751617)
chr3 (81-122)||(40066379-40066420)
chr3 (81-122)||(54492971-54493012)
chr3 (5-122)||(54603015-54603140)
chr3 (81-122)||(54627914-54627955)
chr3 (1-45)||(40791520-40791564)
chr3 (1-123)||(35233906-35234037)
chr3 (1-44)||(50672500-50672543)
chr3 (1-44)||(55482246-55482289)
chr3 (3-45)||(33128582-33128624)
chr3 (5-122)||(1092184-1092308)
chr3 (81-142)||(35235712-35235773)
chr3 (81-114)||(46650974-46651007)
chr3 (81-122)||(55482161-55482202)
chr3 (1-45)||(8015515-8015559)
chr3 (1-45)||(39285082-39285126)
chr3 (1-45)||(40278274-40278318)
chr3 (1-45)||(43914600-43914644)
chr3 (1-45)||(49316204-49316248)
chr3 (1-44)||(14899342-14899385)
chr3 (1-44)||(24782255-24782298)
chr3 (1-44)||(31584853-31584896)
chr3 (1-44)||(38667282-38667325)
chr3 (1-44)||(45148952-45148995)
chr3 (1-44)||(54492885-54492928)
chr3 (1-44)||(55481506-55481549)
chr3 (84-118)||(31584944-31584978)
chr3 (84-122)||(40791611-40791649)
chr3 (81-123)||(50672415-50672457)
chr3 (1-42)||(1586995-1587036)
chr3 (4-45)||(14509345-14509386)
chr3 (81-122)||(35235097-35235138)
chr3 (5-45)||(20819392-20819432)
chr3 (1-37)||(21414656-21414692)
chr3 (4-44)||(22847796-22847836)
chr3 (5-45)||(25555638-25555678)
chr3 (1-41)||(33982051-33982091)
chr3 (5-45)||(35235013-35235053)
chr3 (1-41)||(38667716-38667756)
[»] chr6 (13 HSPs)
chr6 (1-138)||(28537692-28537837)
chr6 (81-142)||(1563150-1563211)
chr6 (1-122)||(1563794-1563920)
chr6 (81-122)||(11099783-11099824)
chr6 (81-122)||(28538083-28538124)
chr6 (1-45)||(8590579-8590623)
chr6 (1-122)||(23075138-23075265)
chr6 (81-124)||(11099186-11099229)
chr6 (1-45)||(32597109-32597153)
chr6 (1-44)||(16894581-16894624)
chr6 (1-41)||(15191956-15191996)
chr6 (1-41)||(15468555-15468595)
chr6 (1-45)||(26583081-26583125)
[»] chr5 (49 HSPs)
chr5 (1-142)||(5574833-5574982)
chr5 (1-138)||(17647453-17647598)
chr5 (5-122)||(5574136-5574260)
chr5 (157-221)||(40100971-40101036)
chr5 (1-44)||(6809376-6809419)
chr5 (83-122)||(6915241-6915280)
chr5 (83-141)||(6914380-6914437)
chr5 (84-122)||(24087299-24087337)
chr5 (81-122)||(17648176-17648217)
chr5 (81-142)||(26359394-26359455)
chr5 (1-45)||(20731026-20731070)
chr5 (1-45)||(21086150-21086194)
chr5 (1-45)||(38424852-38424896)
chr5 (1-44)||(14197888-14197931)
chr5 (84-122)||(19293041-19293079)
chr5 (9-114)||(26359676-26359789)
chr5 (4-44)||(2301299-2301339)
chr5 (1-45)||(7950956-7951000)
chr5 (5-45)||(8505902-8505942)
chr5 (5-45)||(21362399-21362439)
chr5 (1-45)||(27500817-27500861)
chr5 (1-45)||(34217023-34217067)
chr5 (1-44)||(746508-746551)
chr5 (1-44)||(2745395-2745438)
chr5 (1-44)||(5577270-5577313)
chr5 (4-43)||(6834654-6834693)
chr5 (1-44)||(6915326-6915369)
chr5 (7-42)||(12852987-12853022)
chr5 (1-44)||(29235621-29235664)
chr5 (1-44)||(34217198-34217241)
chr5 (1-36)||(38977727-38977762)
chr5 (84-122)||(5577186-5577224)
chr5 (4-45)||(1144277-1144318)
chr5 (1-45)||(25525863-25525908)
chr5 (1-41)||(729499-729539)
chr5 (1-45)||(3307192-3307236)
chr5 (1-45)||(6835268-6835312)
chr5 (1-45)||(7951374-7951417)
chr5 (1-45)||(10623386-10623430)
chr5 (1-45)||(13545309-13545353)
chr5 (1-45)||(13968706-13968750)
chr5 (1-45)||(14196037-14196081)
chr5 (1-45)||(19293127-19293171)
chr5 (5-45)||(25455721-25455761)
chr5 (4-44)||(26394793-26394833)
chr5 (1-45)||(27188625-27188668)
chr5 (1-45)||(36086163-36086206)
chr5 (1-45)||(38978316-38978360)
chr5 (1-45)||(39047468-39047512)
[»] chr2 (24 HSPs)
chr2 (1-142)||(9708037-9708186)
chr2 (1-142)||(36207830-36207979)
chr2 (81-122)||(9708771-9708812)
chr2 (1-122)||(3106868-3106997)
chr2 (81-142)||(15830106-15830167)
chr2 (81-122)||(15830742-15830783)
chr2 (1-45)||(38935887-38935931)
chr2 (1-44)||(3106317-3106360)
chr2 (1-44)||(44747874-44747917)
chr2 (4-45)||(20463573-20463614)
chr2 (1-45)||(7337945-7337989)
chr2 (81-122)||(36207225-36207268)
chr2 (1-36)||(12138653-12138688)
chr2 (1-44)||(35059112-35059155)
chr2 (1-44)||(41727001-41727044)
chr2 (1-43)||(41425582-41425624)
chr2 (1-34)||(1090674-1090707)
chr2 (1-42)||(21545253-21545294)
chr2 (4-45)||(22064540-22064581)
chr2 (1-45)||(1091241-1091285)
chr2 (1-45)||(4646061-4646105)
chr2 (1-45)||(7338734-7338778)
chr2 (1-45)||(18060408-18060452)
chr2 (86-122)||(38937616-38937652)
[»] scaffold0113 (1 HSPs)
scaffold0113 (83-142)||(12732-12791)
[»] chr7 (46 HSPs)
chr7 (81-142)||(15753100-15753161)
chr7 (1-122)||(15752391-15752517)
chr7 (5-122)||(26928244-26928370)
chr7 (1-142)||(14102985-14103134)
chr7 (1-142)||(14413002-14413151)
chr7 (54-138)||(36898336-36898423)
chr7 (82-142)||(26832405-26832465)
chr7 (1-45)||(33227835-33227879)
chr7 (83-122)||(36897650-36897689)
chr7 (81-122)||(14103708-14103749)
chr7 (81-122)||(14413725-14413766)
chr7 (86-138)||(36898267-36898319)
chr7 (1-44)||(24213265-24213308)
chr7 (1-44)||(29418022-29418065)
chr7 (84-122)||(29417936-29417974)
chr7 (81-123)||(44950521-44950562)
chr7 (1-45)||(16083150-16083194)
chr7 (1-45)||(17774458-17774502)
chr7 (86-122)||(17774549-17774585)
chr7 (5-45)||(26831701-26831741)
chr7 (1-45)||(29644888-29644932)
chr7 (86-122)||(42260939-42260975)
chr7 (1-44)||(2755911-2755954)
chr7 (1-44)||(19072076-19072119)
chr7 (1-44)||(21366411-21366454)
chr7 (1-44)||(23678764-23678807)
chr7 (1-44)||(31308406-31308448)
chr7 (1-44)||(34345390-34345433)
chr7 (1-44)||(38184342-38184385)
chr7 (1-44)||(43759656-43759699)
chr7 (1-44)||(48343736-48343779)
chr7 (1-35)||(21125574-21125608)
chr7 (4-45)||(34959042-34959083)
chr7 (1-45)||(4236288-4236332)
chr7 (1-45)||(4287098-4287142)
chr7 (4-44)||(22114042-22114082)
chr7 (1-45)||(24212474-24212518)
chr7 (1-45)||(31309289-31309333)
chr7 (1-45)||(33210427-33210471)
chr7 (1-45)||(33228466-33228510)
chr7 (1-45)||(33696656-33696700)
chr7 (1-45)||(33697230-33697274)
chr7 (1-45)||(34345845-34345889)
chr7 (1-41)||(39880660-39880700)
chr7 (4-44)||(40525359-40525399)
chr7 (1-45)||(44157623-44157667)
[»] scaffold0340 (2 HSPs)
scaffold0340 (5-122)||(1476-1601)
scaffold0340 (81-142)||(2167-2228)
[»] scaffold0132 (1 HSPs)
scaffold0132 (5-122)||(42268-42393)
[»] chr4 (42 HSPs)
chr4 (1-142)||(1614710-1614859)
chr4 (5-122)||(6336860-6336985)
chr4 (81-142)||(42259534-42259595)
chr4 (5-122)||(1613618-1613743)
chr4 (81-122)||(56443382-56443423)
chr4 (81-142)||(56443997-56444058)
chr4 (1-45)||(15739576-15739620)
chr4 (1-44)||(52177266-52177309)
chr4 (1-45)||(36111646-36111690)
chr4 (1-44)||(17215103-17215146)
chr4 (1-44)||(36112123-36112166)
chr4 (87-142)||(55083278-55083333)
chr4 (84-122)||(39334217-39334255)
chr4 (84-122)||(42260105-42260143)
chr4 (81-122)||(48083198-48083239)
chr4 (81-122)||(55082690-55082731)
chr4 (1-45)||(220719-220763)
chr4 (1-45)||(29617463-29617507)
chr4 (1-45)||(33617483-33617527)
chr4 (1-45)||(40034253-40034297)
chr4 (1-45)||(41904616-41904660)
chr4 (1-45)||(42987937-42987981)
chr4 (1-45)||(46614608-46614652)
chr4 (1-44)||(12594741-12594784)
chr4 (1-36)||(23161264-23161299)
chr4 (1-44)||(38575709-38575751)
chr4 (1-44)||(39633471-39633514)
chr4 (1-44)||(42259447-42259490)
chr4 (1-44)||(55083384-55083427)
chr4 (83-125)||(12800474-12800516)
chr4 (84-122)||(17215191-17215229)
chr4 (1-35)||(29616885-29616919)
chr4 (86-120)||(36112038-36112072)
chr4 (1-42)||(1565832-1565873)
chr4 (1-45)||(12800379-12800424)
chr4 (4-45)||(34733185-34733226)
chr4 (4-45)||(47309093-47309134)
chr4 (4-45)||(52176370-52176411)
chr4 (5-45)||(9359760-9359800)
chr4 (1-41)||(19170226-19170266)
chr4 (1-45)||(42260191-42260235)
chr4 (4-44)||(55496680-55496720)
[»] scaffold0945 (1 HSPs)
scaffold0945 (1-45)||(2101-2145)
[»] scaffold0214 (1 HSPs)
scaffold0214 (4-45)||(28597-28638)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-44)||(3394-3437)
[»] scaffold0060 (1 HSPs)
scaffold0060 (4-45)||(67223-67264)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-45)||(94882-94923)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-45)||(24430-24474)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-45)||(34946-34990)


Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23703764 - 23703512
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    ||||||||||||||||||||||   ||||||||||||||||||||       ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  23703764 ttgcacttatgtgcaaaatgcctcctgaacttgaaaatttatatatttttt-cttatccttaaaagtgattgcattatcactgaattgtggagcatatta 23703666  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaaactttgctaatatggtagtttaacccaatcattttaagcacttcctaaaa 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23703665 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaaactttgctaatatggtagtttaacccaatcattttaagcacttcctaaaa 23703566  T
Q  193 tcacaccactcactaaaattactctatctaagtagacattgaagtttctctctg 246  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  23703565 tcacaccactcactaaaattactctatctaaatagacattgaggtttctctctg 23703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 21246705 - 21246766
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21246705 tggagcatattagctaagttttgacgatatacaaccatatattggcagtatggtagaacaaa 21246766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 44432118 - 44432057
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  44432118 tggagcatattagctaagttttgacgatatacaaccatatattgatagtattgtagaacaaa 44432057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 1799717 - 1799594
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||||||    
T  1799717 acttatgtgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaagtgagtgcattatcactgaattgtggagcatattagcta 1799618  T
Q  97 agttttgacggtatacaaccatat 120  Q
    ||||||||||||||||||||||||    
T  1799617 agttttgacggtatacaaccatat 1799594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 1799020 - 1799081
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  1799020 tggagcatattagctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 1799081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21247466 - 21247337
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta----tgaa---tggagcatatta 92  Q
    |||||||||||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || ||||    ||||   ||||||||||||    
T  21247466 ttgcacttatgtgcaaaatgccccatgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatatta 21247367  T
Q  93 gctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||  ||||||||||||||||    
T  21247366 gctaagttttgattgtatacaaccatatat 21247337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 46294607 - 46294756
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  46294607 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 46294706  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||| || |||||||||  ||||| ||||||||||    
T  46294707 gctaagttttgacgatatataatcatatattgacagtattgtagaacaaa 46294756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16834533 - 16834680
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  16834533 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat--tatgttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 16834630  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
     ||||||||||||| |||||||||||||||||  ||||| || |||||||    
T  16834631 actaagttttgacgatatacaaccatatattgacagtattgttgaacaaa 16834680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 16835296 - 16835255
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16835296 tggagcatattagctaagttttgacggtatacaaccatatat 16835255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 19076233 - 19076172
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  19076233 tggaacatattagctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 19076172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 19124123 - 19124062
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  19124123 tggaacatattagctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 19124062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 23703195 - 23703331
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaatgattgtattat----gaatgg---agcatattagctaa 97  Q
    |||||||||||| ||||||  | |||||||||||||||||        |||||||||||| ||||||||||||    |||| |   ||||||||||||||    
T  23703195 acttatgtgcaacatgccccctaaacttgaaaatttatat-tttttttcttatccttaaagtgattgtattatcactgaattgtgtagcatattagctaa 23703293  T
Q  98 gttttgacggtatacaaccatatattggtagtatggta 135  Q
    ||||||||| |||||||||||||||||| | |||||||    
T  23703294 gttttgacgatatacaaccatatattggcaatatggta 23703331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 39365094 - 39365135
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39365094 tggagcatattagctaagttttgacggtatacaaccatatat 39365135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 42774973 - 42775014
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42774973 tggagcatattagctaagttttgacggtatacaaccatatat 42775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 44431440 - 44431481
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44431440 tggagcatattagctaagttttgacggtatacaaccatatat 44431481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 16798090 - 16798049
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  16798090 tggagtatattagctaagttttgacggtatacaaccatatat 16798049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 25376985 - 25377026
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  25376985 tggagcatattagctaagttttgacgctatacaaccatatat 25377026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 29487540 - 29487581
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  29487540 tggagcatgttagctaagttttgacggtatacaaccatatat 29487581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26615734 - 26615690
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  26615734 ttgcacttatgagcaaaatgccccttgaacttgaaaatttatata 26615690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27134438 - 27134482
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  27134438 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatata 27134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9033735 - 9033778
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  9033735 ttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 9033778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38623769 - 38623726
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  38623769 ttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 38623726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 45141727 - 45141765
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  45141727 agcatattagctaagttttgtcggtatacaaccatatat 45141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 46295440 - 46295315
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattatgaatg-------gagcatattagcta 96  Q
    |||||||||||||||||||  || |||||||||||||||||       ||||||||||||| ||| || ||||| | ||       ||||||||||||||    
T  46295440 acttatgtgcaaaatgccccctggacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtagagcatattagcta 46295341  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||||||| |||||||| ||||||    
T  46295340 agttttgacgatatacaacgatatat 46295315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49216914 - 49216873
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttat 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  49216914 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttat 49216873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8742566 - 8742522
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  8742566 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 8742522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10373706 - 10373750
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  10373706 ttgcacttatgtgcaaaatgccctctaaacttgaaaatttatata 10373750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 13698254 - 13698214
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  13698254 cacttatgtgcaaaatgccccatgaacttgaaaatttatat 13698214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35156094 - 35156050
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  35156094 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatata 35156050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35392649 - 35392693
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  35392649 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 35392693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40116884 - 40116840
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| || | |||||||||||||||||||    
T  40116884 ttgcacttatgtgcaaaatgtccctcgaacttgaaaatttatata 40116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42233571 - 42233527
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||   ||||||||||||||||||||    
T  42233571 ttgcacttatgtgcaaaatgccacctgaacttgaaaatttatata 42233527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43505944 - 43505900
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  43505944 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 43505900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48731550 - 48731506
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||    
T  48731550 ttgcacttatgcgcaaaatgccctctgaacttgaaaatttatata 48731506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9034540 - 9034497
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  9034540 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 9034497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11707430 - 11707387
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  11707430 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 11707387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25376899 - 25376942
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||    
T  25376899 ttgcaattatgtgcaaaatgcctcttgaacttgaaaatttatat 25376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26537710 - 26537667
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| | |||||| |||||||||||    
T  26537710 ttgcacttatgtgcaaaatgcccctcgaacttaaaaatttatat 26537667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32815010 - 32814967
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  32815010 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 32814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36723973 - 36723930
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  36723973 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 36723930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 40315510 - 40315471
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  40315510 acttatgtgcaaaatgccccctgaacttgaaaatttatat 40315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46585538 - 46585495
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| || ||||| |||||||||||    
T  46585538 ttgcacttatgtgcaaaatgccccttaaacttaaaaatttatat 46585495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 18806881 - 18806919
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  18806881 agcatattagctaagttttgtcggtatacaaccttatat 18806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 28297232 - 28297194
Alignment:
Q  7 ttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  28297232 ttatgtgcaaaatgccccctgaacttgaaaatttatata 28297194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6783299 - 6783340
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  6783299 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 6783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7287713 - 7287754
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||  |||||||||| |||||||||    
T  7287713 cacttatgtgcaaaatgccccctgaacttgaacatttatata 7287754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 27234666 - 27234703
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccat 118  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  27234666 tggaacatattaactaagttttgacggtatacaaccat 27234703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 40315425 - 40315396
Alignment:
Q  81 tggagcatattagctaagttttgacggtat 110  Q
    ||||||||||||||||||||||||||||||    
T  40315425 tggagcatattagctaagttttgacggtat 40315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27235096 - 27235052
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||   ||||||| ||||||||||||    
T  27235096 ttgcacttatgtgcaaaatgcctcctgaacttaaaaatttatata 27235052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27326437 - 27326477
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    ||||||||||||||||||||||| || ||||| ||||||||    
T  27326437 ttgcacttatgtgcaaaatgccccttaaacttaaaaattta 27326477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33740879 - 33740835
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||    
T  33740879 ttgcacttatgtgcaaaatgctccctaaacttgaaaatttatata 33740835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34557821 - 34557778
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||    
T  34557821 ttgcacttatgtgcaaaatgccc-ttaaacttgaaaatatatata 34557778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37613001 - 37613045
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||    
T  37613001 ttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatata 37613045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 39365009 - 39365049
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  39365009 acttatgtgcaaaatgcctcatgaacttgaaaatttatata 39365049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45141637 - 45141681
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaactt-gaaaatttatat 44  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  45141637 ttgcacttatgtgcaaaatgccccctgaacttggaaaatttatat 45141681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47985030 - 47985073
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||    
T  47985030 ttgcacttatgtacaaaatgccca-tgaacttaaaaatttatata 47985073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48803533 - 48803577
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||    ||||||||||||||||||    
T  48803533 ttgcacttatgtgcaaaatgccccccaaacttgaaaatttatata 48803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 52869830 - 52869870
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  52869830 cacttatgtgcaaaatgccccccgaacttgaaaatttatat 52869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 44308278 - 44308403
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    ||||||||||||||||||| |||||||||||||||||||||       ||||||||||||| |||||| |||||    ||||   |||||||||||||||    
T  44308278 acttatgtgcaaaatgccccttgaacttgaaaatttatatatttttttcttatccttaaaagtgattgcattatcactgaattgtggagcatattagcta 44308377  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||    
T  44308378 agttttgacggtatacaaccatatat 44308403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 20832725 - 20832580
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattatga-------atggagcatattagcta 96  Q
    ||||||||||||||| |||  | |||||||||||||||||        ||||||||||||| |||||||||||| |       |||||||||||||||||    
T  20832725 acttatgtgcaaaataccccataaacttgaaaatttatattttgttttcttatccttaaaagtgattgtattatcactgaattatggagcatattagcta 20832626  T
Q  97 agttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||| |||||||||||||||||  || || ||||||||||    
T  20832625 agttttgacgatatacaaccatatattgacagcattgtagaacaaa 20832580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 25990 - 26115
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||||||    
T  25990 acttatgtgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatattagcta 26089  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||| ||||||||||||    
T  26090 agttttgacggtacacaaccatatat 26115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 12503019 - 12502958
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||    
T  12503019 tggagcatattagctaagttttgtcggtatacaacaatatattggcagtatggtaaaacaaa 12502958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 25631099 - 25631044
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  25631099 gagcatattagctaagttttgacggtatacaagcatatattgacagtatggtagaa 25631044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 26842 - 26697
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||| ||  | |||||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  26842 ttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 26743  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    |||||||||||| | |||||||||||||||||  ||||| ||||||    
T  26742 gctaagttttgatgatatacaaccatatattgacagtattgtagaa 26697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 20831968 - 20832009
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20831968 tggagcatattagctaagttttgacggtatacaaccatatat 20832009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 15565453 - 15565414
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15565453 gagcatattagctaagttttgacggtatacaaccatatat 15565414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 15564776 - 15564837
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||| ||||||||||||||||||| | |||||||||||||||||  ||||| ||||||||||    
T  15564776 tggaacatattagctaagttttgatgatatacaaccatatattgacagtattgtagaacaaa 15564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 25630430 - 25630471
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  25630430 tggagcatattaactaagttttgacggtatacaaccatatat 25630471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9263884 - 9263841
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  9263884 ttgcacttatgtgcaaaatgctctttgaacttgaaaatttatat 9263841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25094298 - 25094429
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | ||||| |||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  25094298 ttgcacttatgtgcaaaatgccccctaaacttaaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 25094397  T
Q  93 gctaagttttgacggtatacaaccatatattg 124  Q
     ||||||||||||| |||||||| ||||||||    
T  25094398 actaagttttgacgatatacaactatatattg 25094429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25631187 - 25631144
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  25631187 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 25631144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30729054 - 30729011
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  30729054 ttgcacttatgtgcaaaatgcccactaaacttgaaaatttatat 30729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 15730751 - 15730789
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  15730751 agcatattagctaagttttgacggtatacaatcatatat 15730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9879185 - 9879060
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||    
T  9879185 ttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatatta 9879086  T
Q  93 gctaagttttgacggtatacaaccat 118  Q
    ||||| |||||||| |||||||||||    
T  9879085 gctaaattttgacgatatacaaccat 9879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3177951 - 3177994
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  3177951 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 3177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12764254 - 12764297
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  12764254 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 12764297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25630344 - 25630387
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| ||  |||||||||||||||||||    
T  25630344 ttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatat 25630387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27071746 - 27071788
Alignment:
Q  2 tgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||| |||||||||| |||||||| |||||||||||    
T  27071746 tgcacttatgttcaaaatgccccttgaacttaaaaatttatat 27071788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31819885 - 31819919
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  31819885 ttgcacttatgtgcaaaatgccccttgaacttgaa 31819919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39864139 - 39864105
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  39864139 ttgcacttatgtgcaaaatgccccttgaacttgaa 39864105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 41575089 - 41575131
Alignment:
Q  2 tgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  41575089 tgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 41575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 6869232 - 6869273
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||| |||||||| |||||||||||||||| |||||||    
T  6869232 tggagcatgttagctaaattttgacggtatacaatcatatat 6869273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 17925175 - 17925134
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  17925175 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 17925134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 40450504 - 40450463
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  40450504 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 40450463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41450379 - 41450339
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  41450379 ttgcacttatgtgcaaaatgccc---gaacttgaaaatttatat 41450339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7482740 - 7482696
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||    
T  7482740 ttgcacttatgtgcaaaatgccccctaaacttaaaaatttatata 7482696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41450096 - 41450140
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||| ||||||||||   |||||||||||||||||||    
T  41450096 ttgcacttatgtacaaaatgccctccgaacttgaaaatttatata 41450140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44671956 - 44671916
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  44671956 ttgcacttatgtgcaaaatgccccctaaacttgaaaattta 44671916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 54602294 - 54602441
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattatgaatg-----gagcatattagc 94  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| |||||| ||||| | ||     ||||||||||||    
T  54602294 ttgcacttatgtgcaaaatgccccataaacttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgatgtggagcatattagc 54602393  T
Q  95 taagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  54602394 taagttttgacgatatacaaccatatattgacagtattgtagaacaaa 54602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 32750942 - 32751001
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  32750942 gagcatattagctaagttttgacggtatacaaccatatattgacagtattgtagaacaaa 32751001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 24782333 - 24782392
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  24782333 gagcatattagctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 24782392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40065655 - 40065786
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| |||||| |||||    ||||   ||| |||||||    
T  40065655 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcattgaattgtggaacatatta 40065754  T
Q  93 gctaagttttgacggtatacaaccatatattg 124  Q
    |||||||||||||| |||||||||||||||||    
T  40065755 gctaagttttgacgatatacaaccatatattg 40065786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 20411141 - 20411016
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaatgg---agcatattagcta 96  Q
    |||||||||||||||||||  |||| |||||||||||||||       ||||||||||||| ||| || |||||    |||| |   |||||||||||||    
T  20411141 acttatgtgcaaaatgccccctgaatttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtaaagcatattagcta 20411042  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||    
T  20411041 agttttgacggtatacaaccatatat 20411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 24783096 - 24782973
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta----tgaa---tggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||        |||||||||||| ||| || ||||    ||||   ||||||||||||||||    
T  24783096 acttatgtgcaaaatgccccctgaacttgaaaatttatatatttttt--ttatccttaaaagtgactgcattatcactgaattgtggagcatattagcta 24782999  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||    
T  24782998 agttttgacggtatacaaccatatat 24782973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 54627280 - 54627341
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| |||||||||||||||||  | ||| ||||||||||    
T  54627280 tggagcatattagctaagttttgacgatatacaaccatatattgacaatattgtagaacaaa 54627341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 35234641 - 35234585
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||    
T  35234641 catattagctaagttttgacggtatacaatcatatattggcattatggtcgaacaaa 35234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 20819476 - 20819517
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20819476 tggagcatattagctaagttttgatggtatacaaccatatat 20819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 20820155 - 20820094
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||| |||||||||||||||||| || |||||||||||||||||  ||||| ||||||||||    
T  20820155 tggaacatattagctaagttttgtcgatatacaaccatatattgacagtattgtagaacaaa 20820094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 32751617 - 32751576
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32751617 tggagcatattagctatgttttgacggtatacaaccatatat 32751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 40066420 - 40066379
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  40066420 tggagcatattagctaagttttgacggtatagaaccatatat 40066379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 54492971 - 54493012
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  54492971 tggagcatattagttaagttttgacggtatacaaccatatat 54493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 54603140 - 54603015
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||       |||||| |||||| ||| || |||||    ||||   |||||||||||||||    
T  54603140 acttatgtgcaaaatgccccatgaacttgaaaatttatatatttttttcttatctttaaaagtgactgcattatcactgaattgtggagcatattagcta 54603041  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||| ||| |||||||||||||||    
T  54603040 agttttaacgatatacaaccatatat 54603015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 54627955 - 54627914
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  54627955 tggagcatattagctaagttttgacgatatacaaccatatat 54627914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40791520 - 40791564
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  40791520 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatata 40791564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 35233906 - 35234037
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnn-cttatccttaaaa-tgattgtattat----gaat---ggagcatatt 91  Q
    |||||||||||||||||||| || ||||||||||||||||||||         ||||||||||||| ||| || |||||    ||||   |||| |||||    
T  35233906 ttgcacttatgtgcaaaatgtcccttgaacttgaaaatttatatgctttttttcttatccttaaaagtgactgcattatcactgaattgtggaggatatt 35234005  T
Q  92 agctaagttttgacggtatacaaccatatatt 123  Q
    ||||||||||| ||||||||||||||||||||    
T  35234006 agctaagtttttacggtatacaaccatatatt 35234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50672543 - 50672500
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  50672543 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 50672500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55482289 - 55482246
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  55482289 ttgcacttatgtgcaaaatgtccactgaacttgaaaatttatat 55482246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 33128582 - 33128624
Alignment:
Q  3 gcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  33128582 gcacttatgtgcaaaatgtcccttgaacttgaaaatttatata 33128624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1092184 - 1092308
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||| ||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   ||||||| |||||||    
T  1092184 acttatgtgcaaaatgtcccctgaacttgaaaatttatatatatttttcttatccttaaaagtgactgcattatcactgaattgtggagcat-ttagcta 1092282  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||| |||||||    
T  1092283 agttttgacggtatacaatcatatat 1092308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 35235773 - 35235712
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||  |||||  |||||||||    
T  35235773 tggagcatattagctaagttttgacgatatacaatcatatcttgacagtattatagaacaaa 35235712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 46651007 - 46650974
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaa 114  Q
    ||||||||||||||||||||||||||||||||||    
T  46651007 tggagcatattagctaagttttgacggtatacaa 46650974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 55482202 - 55482161
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  55482202 tggagcatattagctaagttttgatggtatacaactatatat 55482161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8015559 - 8015515
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||    
T  8015559 ttgcacttatgtacaaattgccccttgaacttgaaaatttatata 8015515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39285082 - 39285126
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  39285082 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 39285126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40278274 - 40278318
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  40278274 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 40278318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43914644 - 43914600
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  43914644 ttgcacttatgtgcaaaatgccccataaacttgaaaatttatata 43914600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49316204 - 49316248
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  49316204 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 49316248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14899385 - 14899342
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  14899385 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 14899342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24782255 - 24782298
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| || || |||||||||||||||||    
T  24782255 ttgcacttatgtgcaaaatgtcccttaaacttgaaaatttatat 24782298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31584853 - 31584896
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  ||| |||||||||||||||    
T  31584853 ttgcacttatgtgcaaaatgccccctgagcttgaaaatttatat 31584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38667282 - 38667325
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  38667282 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 38667325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45148952 - 45148995
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  45148952 ttgcacttatgtgcaaaatgccctctaaacttgaaaatttatat 45148995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54492885 - 54492928
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  54492885 ttgcacttatgtgcaaaatgccgcctgaacttgaaaatttatat 54492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55481506 - 55481549
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| ||  |||||||||||||||||||    
T  55481506 ttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatat 55481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 31584944 - 31584978
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccat 118  Q
    |||||||||||||||||||| ||||||||||||||    
T  31584944 agcatattagctaagttttgtcggtatacaaccat 31584978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 40791611 - 40791649
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  40791611 agcatattaactaagttttgtcggtatacaaccatatat 40791649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 50672457 - 50672415
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatatt 123  Q
    |||||||||||| ||||||||||||| | ||||||||||||||    
T  50672457 tggagcatattaactaagttttgacgatgtacaaccatatatt 50672415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1586995 - 1587036
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttat 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  1586995 ttgcacttatgtgcaaaatgccccataaacttgaaaatttat 1587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 14509345 - 14509386
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  14509345 cacttatgtgcaaaatgccctccgaacttgaaaatttatata 14509386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 35235097 - 35235138
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  35235097 tggagcatattagctatgttttgatggtatataaccatatat 35235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 20819392 - 20819432
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||  ||||||| ||||||||||||    
T  20819392 acttatgtgcaaaatgccccctgaacttaaaaatttatata 20819432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21414692 - 21414656
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaa 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  21414692 ttgcacttatgtgcaaaatgcccactgaactttaaaa 21414656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 22847836 - 22847796
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  22847836 cacttatgtgcaaaatgccccctaaacttgaaaatttatat 22847796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 25555638 - 25555678
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  25555638 acttatgtgcaaaaagccctttgaatttgaaaatttatata 25555678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33982091 - 33982051
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    ||||||||||||||||||||||| || ||||| ||||||||    
T  33982091 ttgcacttatgtgcaaaatgccccttaaacttaaaaattta 33982051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 35235013 - 35235053
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||| ||||||||||  ||||||||||||||||||||    
T  35235013 acttatgtacaaaatgccccctgaacttgaaaatttatata 35235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38667756 - 38667716
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    ||||||||||||||||||||||| || ||||| ||||||||    
T  38667756 ttgcacttatgtgcaaaatgccccttaaacttaaaaattta 38667716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28537692 - 28537837
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| ||||||||||||    ||||   |||||||||||    
T  28537692 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatattttgttttcttatccttaaaagtgattgtattatcactgaattttggagcatatta 28537791  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    |||||||||||||| |||||||||||||||||  ||||| ||||||    
T  28537792 gctaagttttgacgatatacaaccatatattgacagtattgtagaa 28537837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 1563150 - 1563211
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1563150 tggagcatattagccaagttttaacggtatacaaccatatattggaagtatggtagaacaaa 1563211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1563920 - 1563794
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta-tgaat---ggagcatattagct 95  Q
    ||||||||||||||||| || || ||||||||||||||||||||        |||||| |||||| |||||| |||| |||||   |||||||||||| |    
T  1563920 ttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatatttttttttcttatctttaaaagtgattgcattactgaattgtggagcatattagat 1563821  T
Q  96 aagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||||    
T  1563820 aagttttgacggtatacaaccatatat 1563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 11099824 - 11099783
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11099824 tggagcatattagctaagttttgacggtatacaaccatatat 11099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 28538124 - 28538083
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28538124 tggagcatattagctaagttttgacggtatacaaccatatat 28538083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8590623 - 8590579
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  8590623 ttgcacttatgtgcaaaatgcccgctgaacttgaaaatttatata 8590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23075265 - 23075138
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattatga------atggagcatattag 93  Q
    |||||||||||||||||||||||  |||||||||||||||||||        ||||||||||||| |||||| ||| | |       || ||||||||||    
T  23075265 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat-ttttattcttatccttaaaagtgattgcattgtcactgattgtgaagcatattag 23075167  T
Q  94 ctaagttttgacggtatacaaccatatat 122  Q
    |||||||||| ||||||||||||||||||    
T  23075166 ctaagttttgtcggtatacaaccatatat 23075138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 11099186 - 11099229
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattg 124  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  11099186 tggagcaaattagctaagttttgacgatatacaaccatatattg 11099229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32597153 - 32597109
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||| | || ||||||||||||||||||    
T  32597153 ttgcacttatgtgcaaaatgctccttaaacttgaaaatttatata 32597109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16894581 - 16894624
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  16894581 ttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 16894624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15191956 - 15191996
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  15191956 ttgcacttatgtgcaaaatgccccctaaacttgaaaattta 15191996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15468595 - 15468555
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  15468595 ttgcacttatgtgcaaaatgccccctaaacttgaaaattta 15468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26583125 - 26583081
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | |||||||| |||||||||    
T  26583125 ttgcacttatgtgcaaaatgccctctaaacttgaacatttatata 26583081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5574982 - 5574833
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||| ||||||||||||  | |||||||||||||||||        ||||||||||||| ||||||||||||    ||||   |||||||||||    
T  5574982 ttgcacttatatgcaaaatgccccataaacttgaaaatttatattttgttttcttatccttaaaagtgattgtattatcactgaattgtggagcatatta 5574883  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  5574882 gctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 5574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17647453 - 17647598
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||    
T  17647453 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatatta 17647552  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    |||||||||||||| |||||||||||||||||  ||||| ||||||    
T  17647553 gctaagttttgacgatatacaaccatatattgacagtattgtagaa 17647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 5574136 - 5574260
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta----tgaa---tggagcatattagcta 96  Q
    ||||||||||||||||||| |||||||||||||||||||||       ||||||||||||| ||| || ||||    ||||   |||||||| |||||||    
T  5574136 acttatgtgcaaaatgccccttgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattaccactgaattgtggagcat-ttagcta 5574234  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||| |||||||    
T  5574235 agttttgacggtatacaatcatatat 5574260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 40100971 - 40101036
Alignment:
Q  157 gtagtttaacccaatcattttaagcacttcctaaaatcacaccactcact-aaaattactctatct 221  Q
    |||||||||||||||| ||| |||||||||||||||  |||||||||||| |||||||||||||||    
T  40100971 gtagtttaacccaatcgtttcaagcacttcctaaaaatacaccactcactaaaaattactctatct 40101036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6809419 - 6809376
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  6809419 ttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 6809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 6915280 - 6915241
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6915280 gagcatattagctaagttttgacggtatacaaccatatat 6915241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 6914380 - 6914437
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaa 141  Q
    |||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||    
T  6914380 gagcatattagctaagttttgacgat-tacaactatatattggcagtatggtagaacaa 6914437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 24087337 - 24087299
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24087337 agcatattagctaagttttgacggtatacaaccatatat 24087299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 17648217 - 17648176
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17648217 tggagcatattagctaagttttgatggtatacaaccatatat 17648176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 26359394 - 26359455
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  26359394 tggagtatattaactaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 26359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20731026 - 20731070
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  20731026 ttgcacttatgtgcaaaatgccccttgcacttgaaaatttatata 20731070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21086194 - 21086150
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||    
T  21086194 ttgcacttatgtgcaaaatgcgcattgaacttgaaaatatatata 21086150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38424896 - 38424852
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  38424896 ttgcacttatgtgcaaaatgccccatgaacttgaaaatttatata 38424852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14197931 - 14197888
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  14197931 ttgcacttatatgcaaaatgccccttgaacttgaaaatttatat 14197888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 19293079 - 19293041
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  19293079 agcatattagctaagttttgtcggtatacaaccatatat 19293041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 26359789 - 26359676
Alignment:
Q  9 atgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagctaagtt 100  Q
    |||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   ||| |||||||||||||||    
T  26359789 atgtgcaaaatgccccatgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggaacatattagctaagtt 26359690  T
Q  101 ttgacggtatacaa 114  Q
    ||||||||||||||    
T  26359689 ttgacggtatacaa 26359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2301339 - 2301299
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  2301339 cacttatgtgcaaaatgcccctttaacttgaaaatttatat 2301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7950956 - 7951000
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||    
T  7950956 ttgcactaatgtgcaaaataccccttgaacttgaaaatttatata 7951000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 8505942 - 8505902
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  8505942 acttatgtgcaaaatgccctctgaacttgaaaatttatata 8505902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 21362439 - 21362399
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  21362439 acttatgtgcaaaatgcccctagaacttgaaaatttatata 21362399  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27500861 - 27500817
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  27500861 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 27500817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34217023 - 34217067
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||    
T  34217023 ttgcactcatgtgcaaaatgccctctgaacttgaaaatttatata 34217067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 746508 - 746551
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  746508 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 746551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2745438 - 2745395
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||| |||| || |||||||||||||||||    
T  2745438 ttgcacttatgtgcaaaacgccccttaaacttgaaaatttatat 2745395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5577313 - 5577270
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  ||||| |||||||||||||    
T  5577313 ttgcacttatgtgcaaaatgccccctgaacatgaaaatttatat 5577270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 6834654 - 6834693
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttata 43  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  6834654 cacttatgtgcaaaatgtccattgaacttaaaaatttata 6834693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6915369 - 6915326
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||| ||||    
T  6915369 ttgcacttatgtgcaaaatgccccctgaacttgaaaattaatat 6915326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 42
Target Start/End: Complemental strand, 12853022 - 12852987
Alignment:
Q  7 ttatgtgcaaaatgcccattgaacttgaaaatttat 42  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12853022 ttatgtgcaaaatgcacattgaacttgaaaatttat 12852987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29235621 - 29235664
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  29235621 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 29235664  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34217241 - 34217198
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34217241 ttgcacttatgtgcaaaatgtccgttgaacttaaaaatttatat 34217198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 38977727 - 38977762
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaa 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38977727 ttgcacttatgtgcaaaatgccccttgaacttgaaa 38977762  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 5577224 - 5577186
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  5577224 agcatattaactaagttttgtcggtatacaaccatatat 5577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1144318 - 1144277
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  1144318 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 1144277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25525908 - 25525863
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttg-aaaatttatata 45  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||    
T  25525908 ttgcacttatgtgcaaaatgccccctgaacttgaaaaatttatata 25525863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 729499 - 729539
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    ||||||||||||||||||||||| || ||||| ||||||||    
T  729499 ttgcacttatgtgcaaaatgccccttaaacttaaaaattta 729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3307236 - 3307192
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||| ||||||||||||    
T  3307236 ttgcacttatgtgcaaaatgccccccgaactttaaaatttatata 3307192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6835312 - 6835268
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||    
T  6835312 ttgcacttatgtgcaaaatgcccctcgaatttaaaaatttatata 6835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7951417 - 7951374
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  7951417 ttgcacttatgtgcaaaatgccc-ccgaacttgaaaatttatata 7951374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10623430 - 10623386
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||    
T  10623430 ttgcacttatatgcaaaatgccccctaaacttgaaaatttatata 10623386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13545353 - 13545309
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||    |||||||||||||||||||    
T  13545353 ttgcacttatgtgcaaaatgcctcccgaacttgaaaatttatata 13545309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13968750 - 13968706
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||    
T  13968750 ttgcacttatgtgcaaattgccccctaaacttgaaaatttatata 13968706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14196037 - 14196081
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||| ||||||||||   |||||||||||||||||||    
T  14196037 ttgcacttatgtacaaaatgccccccgaacttgaaaatttatata 14196081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19293171 - 19293127
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||  ||  ||||||||||||||||||||    
T  19293171 ttgcacttatgtgcaaaatatcccctgaacttgaaaatttatata 19293127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 25455721 - 25455761
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||  | |||||||||||||||||||    
T  25455721 acttatgtgcaaaatgccattcgaacttgaaaatttatata 25455761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26394833 - 26394793
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  26394833 cacttatgtgcaaaatgccccataaacttgaaaatttatat 26394793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27188668 - 27188625
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  27188668 ttgcacttatgtgcaaaatgccc-ccgaacttgaaaatttatata 27188625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36086206 - 36086163
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  36086206 ttgcacttatgtgcaaaatgccc-ctgaacttgaaaatttttata 36086163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38978360 - 38978316
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||| ||||||||||||    
T  38978360 ttgcacttatgtgcaaaatgccccccgaactttaaaatttatata 38978316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39047468 - 39047512
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||    
T  39047468 ttgcacttatctgcaaaatgccccctcaacttgaaaatttatata 39047512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9708037 - 9708186
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | |||||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  9708037 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 9708136  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  9708137 gctaagttttgacgatatacaaccatatattgacagtattgtagaacaaa 9708186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36207979 - 36207830
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||  ||||||    
T  36207979 ttgcacttatgtgcaaaatgctctctgaacttgaaaatttatatatttttttcttatccttaaaaatgaatgcattatcactgaattgtggacaatatta 36207880  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  36207879 gctaagttttgacggtatacaatcatatattggcagtatggtagaacaaa 36207830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 9708812 - 9708771
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9708812 tggagcatattagctaagttttgacggtatacaaccatatat 9708771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3106997 - 3106868
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta----tgaa---tggagcatatta 92  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||       ||||||||||||| ||| || ||||    ||||   ||||||||||||    
T  3106997 ttgcacttatgtgcaaaatgccccatgaacttaaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatatta 3106898  T
Q  93 gctaagttttgacggtatacaaccatatat 122  Q
    | |||||||| ||| |||||||||||||||    
T  3106897 gttaagttttaacgatatacaaccatatat 3106868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 15830106 - 15830167
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||  ||||| ||||||||||    
T  15830106 tggagcataatagctaagttttgacgatatataaccatatattgacagtattgtagaacaaa 15830167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 15830783 - 15830742
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  15830783 tggagcatattagctaagttttgatggtatacaaccatatat 15830742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38935887 - 38935931
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  38935887 ttgcacttatgtgcaaaatgccccgtgaacttgaaaatttatata 38935931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3106317 - 3106360
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  3106317 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 3106360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44747917 - 44747874
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  44747917 ttgcacttatgtgcaaaatgcccatcgaacttaaaaatttatat 44747874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 20463614 - 20463573
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  20463614 cacttatgtgcaaaatgctccttgaacttgaaaatttatata 20463573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7337945 - 7337989
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||| |||||||||| || |||||||||||||||||||||    
T  7337945 ttgcacttaagtgcaaaatgacccttgaacttgaaaatttatata 7337989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 36207225 - 36207268
Alignment:
Q  81 tggagcatattagctaagttttgacgg--tatacaaccatatat 122  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  36207225 tggagcatattagctaagttttgacggtatatacaaccatatat 36207268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12138653 - 12138688
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaa 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12138653 ttgcacttatgtgcaaaatgccccttgaacttgaaa 12138688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35059155 - 35059112
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  35059155 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 35059112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41727044 - 41727001
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  41727044 ttgcacttatgtgcaaaatgccctctaaacttgaaaatttatat 41727001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41425582 - 41425624
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttata 43  Q
    ||||||||||||||||||| |||  ||||||||||||||||||    
T  41425582 ttgcacttatgtgcaaaataccccatgaacttgaaaatttata 41425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1090674 - 1090707
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttga 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  1090674 ttgcacttatgtgcaaaatgccccttgaacttga 1090707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21545294 - 21545253
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttat 42  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  21545294 ttgcacttatgtgcaaaatgcctcctgaacttgaaaatttat 21545253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 22064581 - 22064540
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  22064581 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 22064540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1091285 - 1091241
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||| ||||||||||||    
T  1091285 ttgcacttatgtgcaaaatgccccccgaactttaaaatttatata 1091241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4646061 - 4646105
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||    
T  4646061 ttgcacttatttgcaaaatgccccctaaacttgaaaatttatata 4646105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7338778 - 7338734
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||    ||||||||||||||||||    
T  7338778 ttgcacttatgtgcaaaatgccctccaaacttgaaaatttatata 7338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18060452 - 18060408
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||    
T  18060452 ttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatata 18060408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 38937616 - 38937652
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  38937616 catattagataagttttgacggtatacaaccacatat 38937652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 12732 - 12791
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  12732 gagcatattagctaagttttgagggtatacaaccatatattggcagtatggtagaacaaa 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 15753161 - 15753100
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15753161 tggagcatattagccaagttttaacggtatacaaccatatattggaagtatggtagaacaaa 15753100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15752391 - 15752517
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtatta-tgaat---ggagcatattagct 95  Q
    ||||||||||||||||| || || ||||||||||||||||||||        |||||| |||||| |||||| |||| |||||   |||||||||||| |    
T  15752391 ttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatatttttttttcttatctttaaaagtgattgcattactgaattgtggagcatattagat 15752490  T
Q  96 aagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||||    
T  15752491 aagttttgacggtatacaaccatatat 15752517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 26928244 - 26928370
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnn-cttatccttaaaa-tgattgtattat----gaat---ggagcatattagct 95  Q
    |||||||||||||||||||  ||||||||||||||||||||        ||||||||||||| |||||| |||||    ||||   ||||||||||||||    
T  26928244 acttatgtgcaaaatgccccctgaacttgaaaatttatatatattttttcttatccttaaaagtgattgcattatcactgaattgtggagcatattagct 26928343  T
Q  96 aagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||||||    
T  26928344 aagttttgacggtatacaaccatatat 26928370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14102985 - 14103134
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | || ||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  14102985 ttgcacttatgtgcaaaatgccccctaaatttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 14103084  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||||||||||||||||  | ||| ||||||||||    
T  14103085 gctaagttttgacgatatacaaccatatattgacaatattgtagaacaaa 14103134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14413002 - 14413151
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  | || ||||||||||||||        ||||||||||||| |||||| |||||    ||||   |||||||||||    
T  14413002 ttgcacttatgtgcaaaatgccccctaaatttgaaaatttatattttgttttcttatccttaaaagtgattgcattatcactgaattgtggagcatatta 14413101  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||||||||||||||||  | ||| ||||||||||    
T  14413102 gctaagttttgacgatatacaaccatatattgacaatattgtagaacaaa 14413151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 36898423 - 36898336
Alignment:
Q  54 ttatccttaaaatgattgtattatgaatggag---catattagctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    |||||||||||||||||||||||| | | | |   ||||||||||||||||||||| |||||||||||||||||  ||||| ||||||    
T  36898423 ttatccttaaaatgattgtattatcatttgtgaatcatattagctaagttttgacgatatacaaccatatattgacagtattgtagaa 36898336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 26832465 - 26832405
Alignment:
Q  82 ggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    ||||||||||||||| ||||||||| |||||||||||||||||  ||||| ||||||||||    
T  26832465 ggagcatattagctatgttttgacgatatacaaccatatattgacagtattgtagaacaaa 26832405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33227835 - 33227879
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  33227835 ttgcacttatgtgcaaaatgcccgttgaacttgaaaatttatata 33227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 36897650 - 36897689
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36897650 gagcatattagctaagttttgacggtatacaaccatatat 36897689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 14103749 - 14103708
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14103749 tggagcatattagctaagttttgatggtatacaaccatatat 14103708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 14413766 - 14413725
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14413766 tggagcatattagctaagttttgatggtatacaaccatatat 14413725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 36898319 - 36898267
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatatattggtagtatggtagaa 138  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||| ||||||    
T  36898319 catattagctaagttttgacgatatacaaccatatattgacagtattgtagaa 36898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24213308 - 24213265
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  24213308 ttgcacttatgtgcaaaatgccccttaaacttgaaaatttatat 24213265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29418065 - 29418022
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  29418065 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 29418022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 29417974 - 29417936
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  29417974 agcatattagctaagttttgtcggtatacaaccatatat 29417936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 44950562 - 44950521
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatatt 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  44950562 tggagcatattagctaagttt-gacggtatacaaccatatatt 44950521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16083150 - 16083194
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| || || ||||||||||||||||||    
T  16083150 ttgcacttatgtgcaaaatgacccttaaacttgaaaatttatata 16083194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17774458 - 17774502
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  17774458 ttgcacttatgtgcaaaatgccccctgaaattgaaaatttatata 17774502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 17774549 - 17774585
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||| ||||||||||||||||||    
T  17774549 catattagctaagttttgtcggtatacaaccatatat 17774585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 26831701 - 26831741
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  26831701 acttatgtgcaaaatgccccatgaacttgaaaatttatata 26831741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29644932 - 29644888
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||    
T  29644932 ttgcacttatgtgcaaaatgccccatgaacttgaaaatatatata 29644888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 42260939 - 42260975
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42260939 catattagctaaattttgacggtatacaaccatatat 42260975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2755954 - 2755911
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  ||||||| |||||||||||    
T  2755954 ttgcacttatgtgcaaaatgccccatgaacttaaaaatttatat 2755911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19072119 - 19072076
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  19072119 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 19072076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21366411 - 21366454
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  21366411 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 21366454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23678807 - 23678764
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  23678807 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 23678764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31308406 - 31308448
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  31308406 ttgcacttatgtgcaaaatgccc-ctgaacttgaaaatttatat 31308448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34345390 - 34345433
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  34345390 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 34345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38184342 - 38184385
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  38184342 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 38184385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43759656 - 43759699
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  43759656 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 43759699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48343736 - 48343779
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  48343736 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 48343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21125608 - 21125574
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  21125608 ttgcacttatgtgcaaaatgccccttgaacttgaa 21125574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 34959083 - 34959042
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||| ||  ||||||||||||||||||||    
T  34959083 cacttatgtgcaaaatgtcccctgaacttgaaaatttatata 34959042  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4236288 - 4236332
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||| ||||    
T  4236288 ttgcacttatgtgcaaaatgccccataaacttgaaaatttttata 4236332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4287098 - 4287142
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||| ||||||||   |||||||||||||||||||    
T  4287098 ttgcacttatgtgctaaatgccccccgaacttgaaaatttatata 4287142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22114042 - 22114082
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  22114042 cacttatgtgcaaaatgccccccgaacttgaaaatttatat 22114082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24212474 - 24212518
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||| ||||||||||||||    
T  24212474 ttgcacttatgtgcaaaatgccctccgaacatgaaaatttatata 24212518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31309333 - 31309289
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||| ||||||||||||    
T  31309333 ttgcacttatgtgcaaaatgccccccgaacttaaaaatttatata 31309289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33210427 - 33210471
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||    
T  33210427 ttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatata 33210471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33228510 - 33228466
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   ||||||||| |||||||||    
T  33228510 ttgcacttatgtgcaaaatgccccccgaacttgaatatttatata 33228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33696656 - 33696700
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||| |   |||||||||||||||||||    
T  33696656 ttgcacttatgtgcaaaatgctccccgaacttgaaaatttatata 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33697274 - 33697230
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||   |||||| ||||||||||||    
T  33697274 ttgcacttatgtgcaaaatgccccccgaacttaaaaatttatata 33697230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34345889 - 34345845
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||    
T  34345889 ttgcacttatgtgcaaaatgtcccctcaacttgaaaatttatata 34345845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39880700 - 39880660
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    ||||||||||||||||||||||| || ||||| ||||||||    
T  39880700 ttgcacttatgtgcaaaatgccccttaaacttaaaaattta 39880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 40525399 - 40525359
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  40525399 cacttatgtgcaaaatgccccccgaacttgaaaatttatat 40525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44157623 - 44157667
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||    ||||||||||||||||||||    
T  44157623 ttgcacttatgtgcaaaatgcttcatgaacttgaaaatttatata 44157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1476 - 1601
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||||||    
T  1476 acttatgtgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcattgaattgtggagcatattagcta 1575  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||||||| |||||||||||||||    
T  1576 agttttgacgatatacaaccatatat 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 2228 - 2167
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||| | |||||||||||||||||  ||||| ||||||||||    
T  2228 tggagcatattagctaagttttgatgatatacaaccatatattgacagtattgtagaacaaa 2167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 42393 - 42268
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||||||||||||||||  ||||||||||||||||||||       |||||| |||||| ||| || |||||    ||||   |||||||||||||||    
T  42393 acttatgtgcaaaatgccccgtgaacttgaaaatttatatatttttttcttatctttaaaagtgactgcattatcactgaattgtggagcatattagcta 42294  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||    
T  42293 agttttgacggtatacaaccatatat 42268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1614859 - 1614710
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaat-gattgtattat----gaat---ggagcatatta 92  Q
    |||||||||||||||||||||||  ||||||||||||||||||||       |||||||||||||  || || |||||    ||||   |||||||||||    
T  1614859 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaaaagactgcattatcactgaattgtggagcatatta 1614760  T
Q  93 gctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||| |||| ||||||||||||  | ||| ||||||||||    
T  1614759 gctaagttttgacgatatataaccatatattgacaatattgtagaacaaa 1614710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 6336985 - 6336860
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattat----gaat---ggagcatattagcta 96  Q
    |||||| ||||||||||||  ||||||||||||||||||||       ||||||||||||| ||| || |||||    ||||   |||||||||||||||    
T  6336985 acttatatgcaaaatgccccctgaacttgaaaatttatatatttttttcttatccttaaaagtgactgcattatcactgaattgtggagcatattagcta 6336886  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||    
T  6336885 agttttgacggtatacaaccatatat 6336860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 42259534 - 42259595
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  42259534 tggagcatattagctaagttttgacggtatacaatcatatatttgcagtatagtagaacaaa 42259595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1613618 - 1613743
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatatannnnnnncttatccttaaaa-tgattgtattatgaat-------ggagcatattagcta 96  Q
    ||||||||||||||||||   ||||||||||||||||||||       ||||||||||||| |||||| ||||| | |       |||||||||||||||    
T  1613618 acttatgtgcaaaatgcctcctgaacttgaaaatttatatatttttttcttatccttaaaagtgattgcattatcactaaattgtggagcatattagcta 1613717  T
Q  97 agttttgacggtatacaaccatatat 122  Q
    |||||||| |||||||||||||||||    
T  1613718 agttttgatggtatacaaccatatat 1613743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 56443382 - 56443423
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  56443382 tggagcatattagctaagttttgacggtatacaaccatatat 56443423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 56444058 - 56443997
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||||||||| |||||||||||||||||  | ||| ||||||||||    
T  56444058 tggagcatattagctaagttttgacgatatacaaccatatattgacaatattgtagaacaaa 56443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15739620 - 15739576
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  15739620 ttgcacttatgtgcaaaatgccccttgaacttgaaaatttatata 15739576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52177309 - 52177266
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  52177309 ttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 52177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36111646 - 36111690
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  36111646 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatata 36111690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17215103 - 17215146
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  17215103 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 17215146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36112166 - 36112123
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  36112166 ttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 36112123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 55083333 - 55083278
Alignment:
Q  87 atattagctaagttttgacggtatacaaccatatattggtagtatggtagaacaaa 142  Q
    |||||||||||||||||||| |||||||||||||||||  | ||| ||||||||||    
T  55083333 atattagctaagttttgacgatatacaaccatatattgacaatattgtagaacaaa 55083278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 39334255 - 39334217
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39334255 agcatattagctaagttttgtcggtatacaaccatatat 39334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 42260143 - 42260105
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42260143 agcatattggctaagttttgacggtatacaaccatatat 42260105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 48083198 - 48083239
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  48083198 tggagcatgttagctaaattttgacggtatacaaccatatat 48083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 55082690 - 55082731
Alignment:
Q  81 tggagcatattagctaagttttgacggtatacaaccatatat 122  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  55082690 tggagcatattagctaaattttgacggtatacaacaatatat 55082731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 220763 - 220719
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| || ||||||||||||| |||||||    
T  220763 ttgcacttatgtgcaaaatgtcccttgaacttgaaaaattatata 220719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29617507 - 29617463
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||    
T  29617507 ttgcacttatgtgcaaaataccccttaaacttgaaaatttatata 29617463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33617527 - 33617483
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||    
T  33617527 ttgcatttatgtgcaaaatgcccactgaacttaaaaatttatata 33617483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40034297 - 40034253
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  40034297 ttgcacttatgtgcaaaatgccccataaacttgaaaatttatata 40034253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41904660 - 41904616
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  41904660 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatata 41904616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42987981 - 42987937
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  42987981 ttgcacttatgtgcaaaatgccccgtaaacttgaaaatttatata 42987937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46614652 - 46614608
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||    
T  46614652 ttgcacttatgtgtaaaatgccaaatgaacttgaaaatttatata 46614608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12594741 - 12594784
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  12594741 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 12594784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23161264 - 23161299
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaa 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23161264 ttgcacttatgtgcaaaatgccccttgaacttgaaa 23161299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38575709 - 38575751
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  38575709 ttgcacttatgtgcaaaatgccc-tcgaacttgaaaatttatat 38575751  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39633514 - 39633471
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  39633514 ttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 39633471  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42259447 - 42259490
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    ||||||| |||||||||||||||  |||||||||||||||||||    
T  42259447 ttgcactcatgtgcaaaatgccccatgaacttgaaaatttatat 42259490  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55083427 - 55083384
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  55083427 ttgcacttatgtgcaaaatgccccctaaacttgaaaatttatat 55083384  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 12800474 - 12800516
Alignment:
Q  83 gagcatattagctaagttttgacggtatacaaccatatattgg 125  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||    
T  12800474 gagcatattagctatgttttgacggtatacaatcatgtattgg 12800516  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 17215191 - 17215229
Alignment:
Q  84 agcatattagctaagttttgacggtatacaaccatatat 122  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  17215191 agcatattagttaagttttgacggtattcaaccatatat 17215229  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 29616885 - 29616919
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaa 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29616885 ttgcacttatgtgcaaaatgcccactgaacttgaa 29616919  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 36112072 - 36112038
Alignment:
Q  86 catattagctaagttttgacggtatacaaccatat 120  Q
    |||||||||||| ||||||||||||||||||||||    
T  36112072 catattagctaaattttgacggtatacaaccatat 36112038  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1565873 - 1565832
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttat 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  1565873 ttgcacttatgtgcaaaatgccccataaacttgaaaatttat 1565832  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12800379 - 12800424
Alignment:
Q  1 ttgcacttatgtgcaaaatgccc-attgaacttgaaaatttatata 45  Q
    |||||||||||||||||||||||  || ||||||||||||||||||    
T  12800379 ttgcacttatgtgcaaaatgcccgtttaaacttgaaaatttatata 12800424  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 34733226 - 34733185
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  34733226 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 34733185  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 47309134 - 47309093
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  47309134 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 47309093  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52176370 - 52176411
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  52176370 cacttatgtgcaaaatgccctatgaatttgaaaatttatata 52176411  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 9359760 - 9359800
Alignment:
Q  5 acttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||| ||||||||| || ||||||||||||||||||    
T  9359760 acttatgtgtaaaatgccctttaaacttgaaaatttatata 9359800  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19170266 - 19170226
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaattta 41  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  19170266 ttgcacttatgtgcaaaatgccccctaaacttgaaaattta 19170226  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42260235 - 42260191
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||    
T  42260235 ttgcacttatgtgcaaaataccccctgaatttgaaaatttatata 42260191  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 55496680 - 55496720
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  55496680 cacttatgtgcaaaatgctcctcgaacttgaaaatttatat 55496720  T

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Target: scaffold0945 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2145 - 2101
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  2145 ttgcacttatgtgcaaaatgcccatcgaacttgaaaatttatata 2101  T

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Target: scaffold0214 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28638 - 28597
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  28638 cacttatgtgcaaaatgccccttaaacttgaaaatttatata 28597  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3394 - 3437
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatat 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  3394 ttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 3437  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 67264 - 67223
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||| ||  ||||||||||||||||||||    
T  67264 cacttatgtgcaaaatgacccctgaacttgaaaatttatata 67223  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 94923 - 94882
Alignment:
Q  4 cacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  94923 cacttatgtgcaaaatgccccccgaacttgaaaatttatata 94882  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24430 - 24474
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    |||||||||| |||| ||||||| | |||||||||||||||||||    
T  24430 ttgcacttatctgcacaatgcccttcgaacttgaaaatttatata 24474  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34990 - 34946
Alignment:
Q  1 ttgcacttatgtgcaaaatgcccattgaacttgaaaatttatata 45  Q
    ||||||||| ||||||||||||   ||||||||||||||||||||    
T  34990 ttgcacttacgtgcaaaatgcctcctgaacttgaaaatttatata 34946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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