View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2891_low_3 (Length: 287)
Name: NF2891_low_3
Description: NF2891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2891_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 32 - 266
Target Start/End: Original strand, 34068462 - 34068690
Alignment:
| Q |
32 |
ggatgaaggaaaataagagaaggaagatggatcatgaagaaggagaggggttgggaaaaacacgtggctacaacagagaaaccagtagaatgaaatgtat |
131 |
Q |
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| T |
34068462 |
ggatgaaggaaaataagagaaggaagatggatcatgaagaaggagaggggttgggaaaaacacgtggctacaacagagaaaccagtagaatgaaatgtat |
34068561 |
T |
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| Q |
132 |
tttgnnnnnnnnaactgtcgaactcgaatggaatgactttannnnnnngaccaagaatggaatgagttgaaatgcgggaaaactaaattaaataaaggtg |
231 |
Q |
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| T |
34068562 |
tttgttttttttaactg------tcgaatggaatgactttatttttttgaccaagaatggaatgagttgaaatgcgggaaaactaaattaaataaaggtg |
34068655 |
T |
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| Q |
232 |
aataaaatattttttgagggggaaggtgaataaaa |
266 |
Q |
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| T |
34068656 |
aataaaatattttttgagggggaaggtgaataaaa |
34068690 |
T |
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