View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2891_low_8 (Length: 228)
Name: NF2891_low_8
Description: NF2891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2891_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 29357682 - 29357878
Alignment:
| Q |
22 |
tagaagtgcaagaaatataaccaagtgaatgccattaaaaccacattannnnnnnaagttacaaaagtaaaaatgacatttatttgcataattgtattgt |
121 |
Q |
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| T |
29357682 |
tagaagttcaagaaatataaccaagtgaatgccattaaaaccacattatttttt-aagttacaaaagtaaaaatgacatttatttgcataattgtattgt |
29357780 |
T |
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| Q |
122 |
tggatcatatgcaagactacactcaaagcaagatcatcaaataagtaaatcctttttctatgttaattgtacgtttaaaggcaactttttgattatgt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
29357781 |
tggatcatatgcaagactacactcaaagcaagatcatcaaataagtaaatcctttttctatgttaattgtacgtttaaaggcaacttttgtattatgt |
29357878 |
T |
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