View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2893_low_3 (Length: 295)
Name: NF2893_low_3
Description: NF2893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2893_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 42293057 - 42292797
Alignment:
| Q |
19 |
aaagatcaagatcaacacaaatattaatactatatagctaactattaaatcaaatactatttgcatttaactaagttatatatatttttaaacatagaac |
118 |
Q |
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| T |
42293057 |
aaagatcaagatcaacacaaatattaatactatatagctaactattaaatcaaatactatttgcatttaactaagttatatatatttttaaacatagaac |
42292958 |
T |
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| Q |
119 |
ttgaatcacctgattgagtcaagattttgctatttccagcataactaagaatcctaactatgaaagatgcaattggaggattgtgcgcgattgttttaga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42292957 |
ttgaatcacctgattgagtcaagattttgctatttccagcataactaagaatcctaactatgaaagatgcaattggaggattgtgcgcgattgttttaga |
42292858 |
T |
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| Q |
219 |
catttctggatataattcaatacgtaaaccacaattcttttccactgataaatgccttcat |
279 |
Q |
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| T |
42292857 |
catttctggatataattcaatacgtaaaccacaattcttttccactgataaatgccttcat |
42292797 |
T |
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