View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2896_high_3 (Length: 207)

Name: NF2896_high_3
Description: NF2896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2896_high_3
NF2896_high_3
[»] chr3 (85 HSPs)
chr3 (6-207)||(37776694-37776895)
chr3 (10-198)||(28529250-28529436)
chr3 (9-198)||(41451889-41452078)
chr3 (22-198)||(20493452-20493628)
chr3 (9-198)||(24734702-24734891)
chr3 (13-198)||(52123954-52124139)
chr3 (10-198)||(5452057-5452243)
chr3 (16-198)||(27243042-27243225)
chr3 (9-198)||(46450064-46450251)
chr3 (16-157)||(18427153-18427292)
chr3 (9-195)||(20791296-20791482)
chr3 (25-198)||(46160946-46161117)
chr3 (66-180)||(26310497-26310611)
chr3 (9-151)||(29588727-29588869)
chr3 (37-198)||(55452037-55452196)
chr3 (19-186)||(8824983-8825150)
chr3 (23-198)||(29755497-29755672)
chr3 (9-195)||(14236019-14236205)
chr3 (9-198)||(48351433-48351622)
chr3 (15-197)||(15790370-15790551)
chr3 (14-198)||(37600128-37600313)
chr3 (16-198)||(46575945-46576126)
chr3 (9-188)||(50156654-50156831)
chr3 (43-185)||(10948588-10948730)
chr3 (68-202)||(40715915-40716049)
chr3 (37-194)||(41387564-41387719)
chr3 (45-185)||(22604570-22604710)
chr3 (66-147)||(19345051-19345132)
chr3 (14-202)||(54140891-54141080)
chr3 (35-147)||(2419484-2419596)
chr3 (70-193)||(50661576-50661700)
chr3 (14-185)||(41707440-41707609)
chr3 (16-194)||(13809083-13809261)
chr3 (97-189)||(46237128-46237220)
chr3 (43-198)||(45515525-45515678)
chr3 (14-198)||(10769723-10769908)
chr3 (10-150)||(44844026-44844167)
chr3 (18-184)||(40702125-40702289)
chr3 (9-126)||(752461-752576)
chr3 (19-167)||(24748913-24749062)
chr3 (29-134)||(38414708-38414813)
chr3 (37-165)||(138793-138921)
chr3 (9-126)||(742025-742140)
chr3 (40-114)||(24429050-24429124)
chr3 (86-164)||(43657067-43657145)
chr3 (69-198)||(2008992-2009120)
chr3 (10-198)||(7640589-7640778)
chr3 (35-108)||(29388614-29388687)
chr3 (87-195)||(30624633-30624739)
chr3 (126-198)||(10769719-10769791)
chr3 (126-198)||(54140887-54140959)
chr3 (10-166)||(43016440-43016598)
chr3 (105-195)||(29389103-29389193)
chr3 (9-131)||(39186028-39186150)
chr3 (97-198)||(21232604-21232705)
chr3 (66-143)||(49072057-49072134)
chr3 (126-198)||(37600124-37600196)
chr3 (130-198)||(52951475-52951543)
chr3 (86-165)||(357790-357869)
chr3 (126-189)||(24748913-24748976)
chr3 (14-196)||(38928007-38928190)
chr3 (22-128)||(38138589-38138695)
chr3 (15-60)||(27243047-27243092)
chr3 (130-198)||(29775136-29775202)
chr3 (126-195)||(38928006-38928075)
chr3 (14-83)||(52951377-52951446)
chr3 (125-194)||(55283167-55283236)
chr3 (68-152)||(42340874-42340958)
chr3 (154-200)||(18722595-18722641)
chr3 (69-147)||(41607459-41607537)
chr3 (99-168)||(35094108-35094177)
chr3 (43-160)||(37285318-37285435)
chr3 (16-77)||(52951476-52951537)
chr3 (25-157)||(36750974-36751106)
chr3 (127-195)||(52951376-52951444)
chr3 (10-116)||(29718846-29718952)
chr3 (131-194)||(40631194-40631257)
chr3 (78-160)||(7419241-7419323)
chr3 (9-59)||(20493579-20493629)
chr3 (20-113)||(49418424-49418518)
chr3 (110-147)||(18722535-18722572)
chr3 (37-165)||(37926561-37926690)
chr3 (126-195)||(39185237-39185306)
chr3 (9-77)||(43657870-43657938)
chr3 (9-57)||(55283103-55283151)
[»] chr6 (45 HSPs)
chr6 (9-194)||(34905337-34905522)
chr6 (37-198)||(445815-445976)
chr6 (13-185)||(5106308-5106480)
chr6 (22-195)||(10133165-10133338)
chr6 (9-195)||(21987292-21987478)
chr6 (37-187)||(31116146-31116296)
chr6 (9-195)||(1392630-1392813)
chr6 (9-147)||(16851967-16852105)
chr6 (18-198)||(12753763-12753943)
chr6 (14-198)||(19090213-19090398)
chr6 (23-148)||(32112725-32112850)
chr6 (37-199)||(2675891-2676053)
chr6 (37-194)||(32122796-32122953)
chr6 (11-166)||(17144669-17144822)
chr6 (86-192)||(35128794-35128900)
chr6 (14-168)||(19737433-19737588)
chr6 (12-153)||(12780758-12780897)
chr6 (10-199)||(31443955-31444144)
chr6 (19-198)||(10060856-10061036)
chr6 (9-143)||(16187428-16187558)
chr6 (35-198)||(8441869-8442020)
chr6 (35-198)||(8450673-8450824)
chr6 (14-152)||(32598947-32599085)
chr6 (86-198)||(6531369-6531481)
chr6 (13-143)||(16187650-16187776)
chr6 (10-148)||(12784934-12785072)
chr6 (9-152)||(16436108-16436250)
chr6 (10-203)||(12690244-12690438)
chr6 (87-168)||(4595769-4595850)
chr6 (97-168)||(12327287-12327358)
chr6 (11-195)||(13001692-13001876)
chr6 (126-198)||(19090209-19090281)
chr6 (86-198)||(373396-373508)
chr6 (96-180)||(2931576-2931660)
chr6 (126-196)||(19737431-19737501)
chr6 (10-145)||(899943-900084)
chr6 (131-202)||(17226645-17226716)
chr6 (126-166)||(9940387-9940427)
chr6 (166-202)||(12780894-12780930)
chr6 (117-168)||(373504-373555)
chr6 (103-150)||(6109916-6109963)
chr6 (16-49)||(35128867-35128900)
chr6 (126-198)||(10060973-10061045)
chr6 (142-198)||(12753755-12753811)
chr6 (16-60)||(19305789-19305833)
[»] chr2 (87 HSPs)
chr2 (9-198)||(26767755-26767944)
chr2 (9-194)||(6980114-6980299)
chr2 (3-194)||(9470082-9470272)
chr2 (16-198)||(12989188-12989370)
chr2 (16-197)||(38464161-38464342)
chr2 (13-195)||(45554567-45554741)
chr2 (9-194)||(44274236-44274420)
chr2 (16-198)||(10981515-10981695)
chr2 (38-198)||(11539420-11539583)
chr2 (10-198)||(36471833-36472021)
chr2 (66-198)||(18511260-18511392)
chr2 (9-198)||(32856129-32856322)
chr2 (14-198)||(28898035-28898220)
chr2 (66-194)||(16719481-16719609)
chr2 (17-195)||(34142141-34142319)
chr2 (14-195)||(42182889-42183071)
chr2 (14-198)||(4964671-4964856)
chr2 (10-198)||(19639090-19639278)
chr2 (10-198)||(19837683-19837871)
chr2 (66-200)||(17188062-17188194)
chr2 (69-194)||(3804585-3804711)
chr2 (9-201)||(12098862-12099053)
chr2 (10-157)||(15884471-15884614)
chr2 (11-152)||(35316397-35316538)
chr2 (3-198)||(15508911-15509107)
chr2 (38-186)||(30718350-30718497)
chr2 (10-190)||(37652240-37652420)
chr2 (56-194)||(7919311-7919447)
chr2 (18-200)||(2122790-2122972)
chr2 (70-198)||(2476533-2476659)
chr2 (37-198)||(33678138-33678298)
chr2 (19-198)||(1110195-1110375)
chr2 (37-194)||(4602890-4603046)
chr2 (17-194)||(37228499-37228678)
chr2 (11-156)||(43414394-43414538)
chr2 (16-148)||(25238278-25238411)
chr2 (10-198)||(24497189-24497375)
chr2 (126-195)||(28898034-28898103)
chr2 (21-152)||(24895272-24895404)
chr2 (86-198)||(31395516-31395628)
chr2 (66-198)||(32701467-32701599)
chr2 (9-148)||(38104295-38104434)
chr2 (10-116)||(472158-472264)
chr2 (112-194)||(1107039-1107121)
chr2 (18-100)||(4552843-4552925)
chr2 (14-195)||(19193501-19193683)
chr2 (9-150)||(19953440-19953582)
chr2 (44-198)||(27494480-27494634)
chr2 (126-194)||(4964671-4964739)
chr2 (126-198)||(37719831-37719903)
chr2 (112-198)||(41805873-41805959)
chr2 (133-194)||(27968919-27968980)
chr2 (133-194)||(28091607-28091668)
chr2 (133-194)||(28101839-28101900)
chr2 (70-198)||(41546082-41546210)
chr2 (66-195)||(45270607-45270735)
chr2 (126-198)||(42183003-42183075)
chr2 (15-102)||(14489539-14489626)
chr2 (127-189)||(11729715-11729777)
chr2 (8-178)||(25730432-25730602)
chr2 (9-182)||(43400146-43400320)
chr2 (104-196)||(10339767-10339857)
chr2 (126-198)||(20951603-20951673)
chr2 (19-148)||(30849284-30849412)
chr2 (9-192)||(31494211-31494393)
chr2 (54-146)||(44674593-44674686)
chr2 (126-198)||(15509028-15509100)
chr2 (88-195)||(19427320-19427425)
chr2 (122-186)||(25666700-25666764)
chr2 (126-198)||(37398808-37398880)
chr2 (10-168)||(42579651-42579810)
chr2 (86-187)||(8009521-8009622)
chr2 (9-148)||(6315705-6315845)
chr2 (123-198)||(11775866-11775939)
chr2 (110-198)||(29795802-29795890)
chr2 (126-198)||(37228613-37228685)
chr2 (131-198)||(44274352-44274419)
chr2 (17-87)||(6420456-6420526)
chr2 (14-60)||(15508915-15508961)
chr2 (14-60)||(37228499-37228545)
chr2 (14-60)||(42182890-42182936)
chr2 (87-198)||(4877280-4877390)
chr2 (161-198)||(19193497-19193534)
chr2 (125-198)||(23463936-23464009)
chr2 (9-58)||(30706407-30706456)
chr2 (127-191)||(14715627-14715691)
chr2 (88-152)||(21215394-21215458)
[»] chr4 (101 HSPs)
chr4 (10-194)||(8108957-8109141)
chr4 (9-195)||(43771126-43771312)
chr4 (10-198)||(39471154-39471342)
chr4 (10-198)||(34129395-34129583)
chr4 (10-198)||(50164392-50164580)
chr4 (14-194)||(24834579-24834759)
chr4 (22-184)||(722168-722330)
chr4 (9-198)||(26361302-26361483)
chr4 (17-190)||(20454545-20454716)
chr4 (21-184)||(754586-754749)
chr4 (10-197)||(47009187-47009374)
chr4 (10-198)||(49077246-49077434)
chr4 (10-198)||(49242167-49242355)
chr4 (19-198)||(40991593-40991772)
chr4 (37-198)||(33653511-33653672)
chr4 (9-157)||(24938409-24938557)
chr4 (74-198)||(50571861-50571985)
chr4 (14-153)||(22542423-22542562)
chr4 (57-198)||(20225383-20225522)
chr4 (66-195)||(46287441-46287570)
chr4 (9-152)||(19447174-19447318)
chr4 (10-145)||(45310943-45311078)
chr4 (15-190)||(48339340-48339515)
chr4 (16-198)||(13069938-13070120)
chr4 (26-168)||(25719123-25719266)
chr4 (38-185)||(29699499-29699645)
chr4 (9-194)||(39016664-39016850)
chr4 (18-194)||(10169648-10169822)
chr4 (10-147)||(31250877-31251015)
chr4 (9-198)||(42862414-42862604)
chr4 (9-153)||(38537507-38537654)
chr4 (54-178)||(50481584-50481708)
chr4 (71-186)||(46242000-46242113)
chr4 (66-198)||(13519944-13520078)
chr4 (14-164)||(30866930-30867081)
chr4 (86-197)||(47237812-47237923)
chr4 (19-168)||(21776848-21776998)
chr4 (10-152)||(43124509-43124651)
chr4 (16-198)||(45081743-45081925)
chr4 (66-186)||(33995986-33996106)
chr4 (19-163)||(52671862-52672006)
chr4 (16-201)||(43958145-43958327)
chr4 (14-194)||(2187812-2187992)
chr4 (43-148)||(5044568-5044673)
chr4 (19-131)||(5545642-5545755)
chr4 (97-198)||(22592301-22592402)
chr4 (25-165)||(37451023-37451161)
chr4 (66-171)||(41153249-41153354)
chr4 (85-189)||(2088735-2088839)
chr4 (11-98)||(11895134-11895222)
chr4 (23-185)||(19937180-19937341)
chr4 (86-168)||(16178611-16178692)
chr4 (18-159)||(51206079-51206221)
chr4 (66-198)||(49682842-49682974)
chr4 (9-129)||(52279253-52279373)
chr4 (9-151)||(35179653-35179796)
chr4 (126-197)||(51206157-51206228)
chr4 (11-177)||(51904611-51904778)
chr4 (71-157)||(38636375-38636461)
chr4 (68-198)||(49769857-49769987)
chr4 (129-198)||(40812034-40812103)
chr4 (48-137)||(46536295-46536384)
chr4 (48-149)||(50652369-50652470)
chr4 (11-194)||(27654478-27654662)
chr4 (126-194)||(39016777-39016845)
chr4 (92-152)||(41278695-41278755)
chr4 (10-148)||(18421826-18421962)
chr4 (14-194)||(37315564-37315742)
chr4 (123-198)||(42862415-42862490)
chr4 (9-198)||(44832460-44832650)
chr4 (112-198)||(48608077-48608163)
chr4 (89-152)||(11127796-11127859)
chr4 (126-198)||(44832577-44832649)
chr4 (110-189)||(1559812-1559891)
chr4 (69-147)||(4138913-4138991)
chr4 (14-60)||(37315564-37315610)
chr4 (126-195)||(37315674-37315743)
chr4 (48-148)||(2860924-2861024)
chr4 (14-148)||(34961699-34961828)
chr4 (92-180)||(50879471-50879559)
chr4 (154-198)||(53871002-53871046)
chr4 (88-143)||(28304089-28304144)
chr4 (10-148)||(1559909-1560047)
chr4 (126-168)||(16178697-16178739)
chr4 (10-48)||(20225350-20225388)
chr4 (11-199)||(5994863-5995052)
chr4 (10-86)||(19321873-19321947)
chr4 (15-60)||(40812039-40812084)
chr4 (133-166)||(47237767-47237800)
chr4 (151-192)||(51904616-51904657)
chr4 (146-198)||(11895084-11895136)
chr4 (126-198)||(13070054-13070126)
chr4 (14-94)||(19933475-19933555)
chr4 (10-62)||(27654474-27654526)
chr4 (134-198)||(33787989-33788053)
chr4 (9-100)||(37586459-37586551)
chr4 (138-194)||(40925787-40925843)
chr4 (125-197)||(40977589-40977661)
chr4 (9-77)||(40991705-40991773)
chr4 (112-152)||(42925337-42925377)
chr4 (9-77)||(47109334-47109402)
[»] chr7 (88 HSPs)
chr7 (10-198)||(22189936-22190124)
chr7 (9-198)||(27888279-27888468)
chr7 (14-198)||(27949270-27949454)
chr7 (10-194)||(11824072-11824254)
chr7 (20-198)||(33008101-33008276)
chr7 (9-202)||(14795124-14795315)
chr7 (9-202)||(15242116-15242307)
chr7 (11-195)||(46517293-46517475)
chr7 (9-198)||(6442162-6442351)
chr7 (21-203)||(32205071-32205250)
chr7 (55-198)||(31502504-31502647)
chr7 (9-195)||(32212864-32213049)
chr7 (11-176)||(7775019-7775183)
chr7 (37-198)||(12263458-12263619)
chr7 (13-152)||(11692222-11692361)
chr7 (9-203)||(39254075-39254269)
chr7 (11-148)||(25686831-25686968)
chr7 (4-196)||(48374428-48374618)
chr7 (9-194)||(24539116-24539302)
chr7 (15-198)||(6580002-6580188)
chr7 (9-194)||(13919781-13919967)
chr7 (9-194)||(17749695-17749881)
chr7 (35-195)||(19422854-19423014)
chr7 (13-178)||(44350800-44350965)
chr7 (85-197)||(19494409-19494521)
chr7 (14-198)||(26703438-26703621)
chr7 (78-191)||(44510999-44511112)
chr7 (86-198)||(17354598-17354710)
chr7 (66-194)||(25092712-25092840)
chr7 (9-195)||(25428472-25428659)
chr7 (16-197)||(45909453-45909636)
chr7 (35-195)||(32178824-32178981)
chr7 (66-195)||(36845573-36845701)
chr7 (86-197)||(22786149-22786260)
chr7 (11-185)||(7459353-7459527)
chr7 (94-200)||(8073367-8073473)
chr7 (85-198)||(12270985-12271095)
chr7 (66-198)||(9648919-9649053)
chr7 (14-152)||(19840883-19841022)
chr7 (69-194)||(32605333-32605457)
chr7 (28-199)||(10933978-10934149)
chr7 (22-128)||(27320441-27320547)
chr7 (126-203)||(37549616-37549693)
chr7 (126-198)||(13919894-13919966)
chr7 (14-169)||(14759669-14759825)
chr7 (87-198)||(10619464-10619574)
chr7 (126-192)||(45909570-45909636)
chr7 (19-148)||(46994366-46994496)
chr7 (126-199)||(14759757-14759830)
chr7 (129-198)||(19840879-19840948)
chr7 (19-90)||(36845495-36845566)
chr7 (87-197)||(9111406-9111516)
chr7 (126-196)||(26703436-26703506)
chr7 (37-94)||(31874117-31874174)
chr7 (130-198)||(2520630-2520698)
chr7 (126-194)||(25428477-25428545)
chr7 (126-194)||(27320226-27320294)
chr7 (121-165)||(31874061-31874105)
chr7 (13-119)||(31759839-31759943)
chr7 (66-177)||(32055594-32055705)
chr7 (30-96)||(7774944-7775009)
chr7 (37-87)||(12167315-12167365)
chr7 (17-87)||(38065328-38065398)
chr7 (125-194)||(31959967-31960036)
chr7 (66-110)||(3855861-3855905)
chr7 (92-148)||(10477284-10477340)
chr7 (9-77)||(27888278-27888346)
chr7 (14-114)||(31628080-31628180)
chr7 (154-198)||(42863573-42863617)
chr7 (105-157)||(45206025-45206077)
chr7 (97-192)||(46067940-46068036)
chr7 (51-194)||(1687985-1688127)
chr7 (97-164)||(17813857-17813923)
chr7 (127-190)||(23934021-23934084)
chr7 (9-60)||(24539256-24539307)
chr7 (131-198)||(27888400-27888467)
chr7 (110-157)||(28713054-28713101)
chr7 (19-90)||(30742544-30742615)
chr7 (42-197)||(31731282-31731439)
chr7 (140-198)||(2520715-2520773)
chr7 (66-136)||(23564086-23564156)
chr7 (131-192)||(20954798-20954859)
chr7 (112-184)||(38065415-38065485)
chr7 (14-58)||(22786152-22786196)
chr7 (9-49)||(32205075-32205115)
chr7 (9-49)||(35549643-35549683)
chr7 (122-154)||(42274656-42274688)
chr7 (14-58)||(42863569-42863613)
[»] chr8 (71 HSPs)
chr8 (9-198)||(1977167-1977356)
chr8 (9-198)||(16983391-16983580)
chr8 (6-195)||(28413861-28414049)
chr8 (17-197)||(5979878-5980057)
chr8 (7-198)||(34861184-34861368)
chr8 (37-194)||(32072098-32072255)
chr8 (10-195)||(8903852-8904037)
chr8 (9-194)||(9952752-9952936)
chr8 (14-198)||(35151728-35151912)
chr8 (22-188)||(24055932-24056098)
chr8 (9-168)||(17499229-17499386)
chr8 (37-198)||(8914768-8914929)
chr8 (14-198)||(13407322-13407507)
chr8 (26-198)||(7493353-7493530)
chr8 (43-198)||(43506535-43506687)
chr8 (9-195)||(23685131-23685313)
chr8 (37-198)||(41727427-41727588)
chr8 (9-168)||(36804833-36804992)
chr8 (77-182)||(1961295-1961400)
chr8 (37-198)||(14236335-14236496)
chr8 (22-195)||(4674911-4675079)
chr8 (16-194)||(6387564-6387741)
chr8 (23-198)||(31301112-31301286)
chr8 (9-191)||(11962676-11962857)
chr8 (10-148)||(13214542-13214680)
chr8 (25-185)||(35689490-35689651)
chr8 (16-195)||(45246432-45246613)
chr8 (86-198)||(7599493-7599605)
chr8 (40-168)||(17741552-17741680)
chr8 (22-168)||(6098784-6098928)
chr8 (37-164)||(35797426-35797551)
chr8 (37-198)||(36629656-36629816)
chr8 (70-156)||(9192040-9192126)
chr8 (69-192)||(17716856-17716977)
chr8 (69-191)||(4319787-4319909)
chr8 (9-150)||(9193427-9193568)
chr8 (37-155)||(9453502-9453621)
chr8 (86-195)||(1423746-1423855)
chr8 (10-134)||(34952504-34952628)
chr8 (68-129)||(35819198-35819259)
chr8 (21-162)||(17915849-17915986)
chr8 (86-193)||(1205829-1205936)
chr8 (86-165)||(43026321-43026400)
chr8 (126-198)||(13856506-13856578)
chr8 (129-196)||(31691625-31691692)
chr8 (9-51)||(1961402-1961444)
chr8 (92-165)||(10868021-10868094)
chr8 (37-136)||(25915088-25915190)
chr8 (118-186)||(37489437-37489505)
chr8 (14-81)||(5095759-5095826)
chr8 (112-198)||(45218614-45218698)
chr8 (86-200)||(33417678-33417791)
chr8 (159-201)||(34952455-34952497)
chr8 (37-198)||(45524897-45525059)
chr8 (118-191)||(12212126-12212199)
chr8 (118-191)||(12456554-12456627)
chr8 (127-200)||(13407316-13407389)
chr8 (90-167)||(28211961-28212038)
chr8 (61-157)||(28485426-28485523)
chr8 (116-197)||(39023428-39023509)
chr8 (66-150)||(3099693-3099777)
chr8 (10-62)||(11574162-11574214)
chr8 (15-58)||(8671086-8671129)
chr8 (126-165)||(34303465-34303504)
chr8 (126-192)||(1205941-1206007)
chr8 (145-198)||(5095829-5095882)
chr8 (9-50)||(6891525-6891566)
chr8 (111-168)||(29011080-29011137)
chr8 (87-198)||(31711620-31711730)
chr8 (9-78)||(38091468-38091537)
chr8 (86-138)||(34303509-34303561)
[»] chr5 (67 HSPs)
chr5 (20-198)||(28490727-28490905)
chr5 (9-200)||(34368355-34368546)
chr5 (9-156)||(41105564-41105711)
chr5 (37-195)||(10141998-10142154)
chr5 (11-152)||(5413730-5413874)
chr5 (9-195)||(30325869-30326054)
chr5 (9-198)||(37455346-37455538)
chr5 (37-198)||(17537124-17537285)
chr5 (9-198)||(42224584-42224774)
chr5 (22-194)||(28223783-28223955)
chr5 (11-187)||(34384687-34384863)
chr5 (9-198)||(28611772-28611961)
chr5 (37-168)||(25710494-25710625)
chr5 (9-168)||(28434816-28434969)
chr5 (10-152)||(41330390-41330530)
chr5 (9-195)||(27592446-27592632)
chr5 (53-198)||(39246605-39246750)
chr5 (9-194)||(1923546-1923731)
chr5 (16-198)||(40971453-40971636)
chr5 (37-198)||(43405390-43405551)
chr5 (37-195)||(28090251-28090407)
chr5 (66-194)||(25630808-25630936)
chr5 (43-198)||(10950083-10950238)
chr5 (42-134)||(14553573-14553665)
chr5 (9-148)||(36337881-36338023)
chr5 (9-148)||(4714796-4714935)
chr5 (84-198)||(28155769-28155881)
chr5 (66-140)||(25919266-25919340)
chr5 (86-198)||(4959275-4959387)
chr5 (11-198)||(32401114-32401302)
chr5 (113-200)||(32309475-32309562)
chr5 (14-187)||(17434849-17435019)
chr5 (9-146)||(10666682-10666819)
chr5 (9-86)||(12076056-12076133)
chr5 (66-147)||(31885882-31885963)
chr5 (14-169)||(17568700-17568856)
chr5 (126-198)||(42224585-42224657)
chr5 (86-165)||(13456236-13456315)
chr5 (14-168)||(32050334-32050489)
chr5 (126-199)||(17568695-17568768)
chr5 (90-175)||(43541871-43541956)
chr5 (87-151)||(24915099-24915163)
chr5 (87-151)||(24990930-24990994)
chr5 (123-195)||(32050418-32050490)
chr5 (16-197)||(6263881-6264061)
chr5 (14-192)||(26072106-26072285)
chr5 (127-198)||(26072218-26072289)
chr5 (112-198)||(1649547-1649633)
chr5 (125-198)||(4959391-4959464)
chr5 (108-200)||(17700166-17700256)
chr5 (126-198)||(6263995-6264067)
chr5 (97-165)||(10253164-10253232)
chr5 (9-60)||(4959274-4959325)
chr5 (87-194)||(8912511-8912618)
chr5 (102-149)||(25564033-25564080)
chr5 (48-186)||(2525583-2525721)
chr5 (69-143)||(34480005-34480079)
chr5 (126-200)||(40971445-40971519)
chr5 (19-88)||(5465656-5465725)
chr5 (126-198)||(24915169-24915239)
chr5 (126-198)||(24991000-24991070)
chr5 (24-100)||(25002014-25002091)
chr5 (118-189)||(13456170-13456239)
chr5 (14-60)||(42224724-42224770)
chr5 (68-101)||(4427336-4427369)
chr5 (18-160)||(4877752-4877898)
chr5 (10-46)||(10300052-10300088)
[»] chr1 (92 HSPs)
chr1 (13-198)||(6133623-6133807)
chr1 (10-194)||(10659764-10659948)
chr1 (15-200)||(26980262-26980447)
chr1 (10-198)||(11987623-11987811)
chr1 (10-194)||(8899015-8899199)
chr1 (37-198)||(41958082-41958241)
chr1 (9-195)||(19101595-19101781)
chr1 (9-198)||(28218040-28218231)
chr1 (10-198)||(2225223-2225409)
chr1 (9-195)||(8741217-8741405)
chr1 (23-198)||(25543337-25543511)
chr1 (9-152)||(30678905-30679048)
chr1 (9-152)||(41948140-41948283)
chr1 (19-168)||(32211788-32211937)
chr1 (25-147)||(33193098-33193219)
chr1 (9-198)||(931371-931560)
chr1 (9-195)||(22540368-22540550)
chr1 (15-198)||(11135736-11135920)
chr1 (66-195)||(3872685-3872813)
chr1 (37-198)||(44271915-44272076)
chr1 (16-198)||(32848583-32848766)
chr1 (9-198)||(11430438-11430627)
chr1 (9-194)||(13114663-13114849)
chr1 (9-194)||(41095602-41095788)
chr1 (9-195)||(15523210-15523392)
chr1 (9-195)||(15531204-15531386)
chr1 (32-193)||(35336868-35337023)
chr1 (26-168)||(37552962-37553102)
chr1 (18-195)||(33059896-33060072)
chr1 (86-195)||(41917995-41918104)
chr1 (14-186)||(27570234-27570406)
chr1 (66-198)||(49730861-49730993)
chr1 (10-168)||(15928582-15928738)
chr1 (37-168)||(29673502-29673633)
chr1 (14-198)||(14093999-14094184)
chr1 (10-198)||(39019572-39019752)
chr1 (69-197)||(46335092-46335223)
chr1 (47-194)||(31074717-31074863)
chr1 (68-157)||(50539162-50539251)
chr1 (126-198)||(13388331-13388403)
chr1 (86-198)||(44739115-44739227)
chr1 (130-197)||(39039470-39039537)
chr1 (9-147)||(39974194-39974326)
chr1 (27-157)||(15468258-15468388)
chr1 (9-198)||(50773104-50773294)
chr1 (15-184)||(51732290-51732456)
chr1 (14-159)||(13388335-13388483)
chr1 (26-166)||(36566925-36567059)
chr1 (14-190)||(33113976-33114152)
chr1 (39-147)||(45179270-45179378)
chr1 (9-168)||(50424859-50425019)
chr1 (107-198)||(9165299-9165390)
chr1 (88-198)||(24436540-24436650)
chr1 (40-150)||(31866361-31866470)
chr1 (70-160)||(39499430-39499519)
chr1 (18-194)||(18157039-18157214)
chr1 (126-198)||(11135853-11135925)
chr1 (9-89)||(16948523-16948603)
chr1 (94-198)||(43851114-43851218)
chr1 (9-165)||(1093063-1093223)
chr1 (72-192)||(4578632-4578752)
chr1 (24-157)||(15660931-15661063)
chr1 (70-165)||(24911493-24911588)
chr1 (66-198)||(6325864-6325993)
chr1 (126-203)||(11430555-11430631)
chr1 (16-105)||(12767329-12767418)
chr1 (126-203)||(32848572-32848649)
chr1 (26-194)||(15906412-15906579)
chr1 (68-152)||(37525572-37525656)
chr1 (126-198)||(41095603-41095675)
chr1 (14-164)||(28109899-28110049)
chr1 (125-195)||(21466681-21466751)
chr1 (49-114)||(47644331-47644396)
chr1 (112-176)||(5602657-5602721)
chr1 (9-184)||(28274797-28274973)
chr1 (16-148)||(28941869-28942000)
chr1 (68-147)||(743467-743546)
chr1 (9-52)||(13889287-13889330)
chr1 (9-75)||(21466614-21466680)
chr1 (9-152)||(29418524-29418669)
chr1 (126-194)||(50773109-50773177)
chr1 (9-60)||(13114803-13114854)
chr1 (14-81)||(32848695-32848762)
chr1 (9-60)||(44739114-44739165)
chr1 (14-60)||(26980395-26980441)
chr1 (112-177)||(14341018-14341083)
chr1 (14-59)||(41095743-41095788)
chr1 (14-58)||(11135740-11135784)
chr1 (10-62)||(28274783-28274835)
chr1 (112-152)||(44760716-44760756)
chr1 (130-166)||(50308786-50308822)
chr1 (14-54)||(50539525-50539565)
[»] scaffold0018 (1 HSPs)
scaffold0018 (10-160)||(27847-27997)
[»] scaffold0204 (1 HSPs)
scaffold0204 (15-168)||(26862-27015)
[»] scaffold0543 (1 HSPs)
scaffold0543 (68-168)||(9691-9791)
[»] scaffold0492 (1 HSPs)
scaffold0492 (68-168)||(11237-11337)
[»] scaffold0838 (1 HSPs)
scaffold0838 (69-180)||(2237-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (69-180)||(2268-2377)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-117)||(204704-204810)
[»] scaffold0005 (2 HSPs)
scaffold0005 (10-199)||(296832-297022)
scaffold0005 (10-62)||(296833-296885)
[»] scaffold0194 (1 HSPs)
scaffold0194 (9-154)||(8405-8554)
[»] scaffold0099 (1 HSPs)
scaffold0099 (88-150)||(27358-27420)
[»] scaffold0054 (2 HSPs)
scaffold0054 (126-198)||(30907-30979)
scaffold0054 (86-159)||(30984-31057)
[»] scaffold0008 (1 HSPs)
scaffold0008 (10-62)||(121196-121247)
[»] scaffold0155 (1 HSPs)
scaffold0155 (86-157)||(35632-35703)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 37776694 - 37776895
Alignment:
Q  6 aagagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaac 105  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37776694 aagagagtaatgctagcaacactcttttatgaacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaac 37776793  T
Q  106 ccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttataa 205  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||| | ||||    
T  37776794 ccacacaaagtggtaggacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcctcatgataa 37776893  T
Q  206 aa 207  Q
    ||    
T  37776894 aa 37776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 28529436 - 28529250
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||| || |||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  28529436 gagtaatgttaacaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccac 28529337  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||  |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  28529336 ac--agtggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcctc 28529250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 41451889 - 41452078
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  41451889 agagcaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaaccca 41451988  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||  || ||||||||||||||||||||| |||||||    
T  41451989 cacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctc 41452078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 20493452 - 20493628
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  20493452 caacactctcttttgaacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtag 20493551  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  20493552 gacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctc 20493628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 24734891 - 24734702
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||    
T  24734891 agagcaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaaccca 24734792  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||  || ||||||||||||||||||||| |||||||    
T  24734791 cacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctc 24734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 52123954 - 52124139
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  52123954 taatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccaca 52124053  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || | || ||||||||||| ||||||||||| |||  ||| ||||||||||||||  || ||||||||||||||||||||||||||    
T  52124054 aaatagtgggacatacattaatttcatccaacaaataagtgagtgctagagagagcgttaaaaagtgagtgttgctagcattcctc 52124139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 5452057 - 5452243
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||| | || |||||||| |||  ||||||||||| |||||||||| ||||    
T  5452057 gagtaatgctagcaacactctcttttgaacactctctccaatactcgctctcttattgatttaaatccttg--ggtctacacttagaaaattgaatccac 5452154  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||| |||||||||||||||||||||||||||| | || || ||||||| |||||||||||||||||||||||||||||    
T  5452155 acaaagtggtgggaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcctc 5452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 27243225 - 27243042
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||||||| |||| ||||||||| |||    
T  27243225 tgctagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaa 27243126  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||||| ||||||||| ||||||||||||||| |||| |||||||||| || ||||| ||||||||||||||| ||||    
T  27243125 gtggtgggacatgcattgattttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcatccctc 27243042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 46450251 - 46450064
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||||| |||| || | |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||    
T  46450251 agagtagtgctagcaacgctctatttt-aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaaccca 46450153  T
Q  109 cac-aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| ||||||||||||||| |||| ||||||||||| ||||||  ||||||| || ||||||||||||||||||||||||||    
T  46450152 cacaaaagtggtgggacatacattgattccatctaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattcctc 46450064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 18427153 - 18427292
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||     
T  18427153 tgctagcaacactctctt--gaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaa 18427250  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    |||| ||||||||||||||||||||||||||| |||| ||||    
T  18427251 tggtgggacatacattgatttcatccaataaatgagtgagtg 18427292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 20791482 - 20791296
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| || ||||||||||| |||| |||| |     
T  20791482 agagtagtgctagcaccactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcg 20791383  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |  ||||||||  |||||||||||||    
T  20791382 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaacgttgctagcattc 20791296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 46161117 - 46160946
Alignment:
Q  25 cactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggac 124  Q
    ||||||||  || ||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||| |||| ||||| |||||||||||| ||||    
T  46161117 cactctctcttggacactctctctaatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggac 46161018  T
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||  |||||||||||||||||||||||| ||||||||  ||||| || ||||||||||||||||||||||||||    
T  46161017 atgtattgatttcatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcattcctc 46160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 26310497 - 26310611
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26310497 tggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagagag 26310596  T
Q  166 agtattgaaaagtga 180  Q
    ||| |||||||||||    
T  26310597 agtgttgaaaagtga 26310611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 29588727 - 29588869
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||| || | |||||| |||||||||||| ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||    
T  29588727 agagtaatgctagtaaaattctcttttgaacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactca 29588826  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagag 151  Q
    || ||||||  ||||||||||||||||| ||||||||||||||    
T  29588827 cataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 55452037 - 55452196
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || |||||||||||| |||| |||||||||||||||||| ||||||||||  |||     
T  55452037 aacactctctctaatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattc 55452136  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||| ||| |   ||||||| || ||||||||||||||||| ||||||||    
T  55452137 catccaataaaagagtgagtac--cagagagtgttcaaaagtgagtgttgctaacattcctc 55452196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 8824983 - 8825150
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtgg 118  Q
    |||||||| ||| || |||||||||||| ||||||||||||||| | |||||||||| |||||| || || |||||||||||||||||| || ||| |||    
T  8824983 tagcaacattctgttttgaacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatgg 8825082  T
Q  119 taggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    | ||||||| |||||||||||| |||||||| || ||| |||||||||   |||||||||||||||||    
T  8825083 tgggacatatattgatttcatctaataaaagggtgagtactagagagatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 29755672 - 29755497
Alignment:
Q  23 aacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg 122  Q
    ||||||||||| ||||||||| |||||||||  || |||| | |||||||||||||||| | |||||||||||||||||||||||||||||||| ||       
T  29755672 aacactctcttttgaacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaa 29755573  T
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||||||  || | ||||||||||  ||| || ||||| | |||||||||||||||||||||||||||||    
T  29755572 acatatattgattctattcgataaaagagtgggtgttaaagagaatgttgaaaagtgagtgttgctagcattcctc 29755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 14236205 - 14236019
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||||||||||||| || |||||||||| ||||||||||||| | | | |||| ||||| ||||||| ||||||||||| |||| |||| |     
T  14236205 agagtagtgctagcaacactctgttttgaacactctttctaatactcacttttttattggtctaaattattgtggatctacactttggaaatagaactcg 14236106  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| ||||||| |||||||||||||||||||| ||| ||||||| ||||||| |  |||| | ||||||| ||||||||    
T  14236105 cataaagtggtgggacatatattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaaataagtgttggtagcattc 14236019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 48351622 - 48351433
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||| | ||| |||||| |||||| | ||||||||||||  ||||| | || ||||||||||| ||| | ||||||||||||||||||||||    
T  48351622 agagtaatgctaacgacattctcttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaaccca 48351523  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| ||  |||||| |||||||| |||||||||||||||  ||  || ||||||| || |||| ||||||||| |||||||||||    
T  48351522 cacaaagtagtgagacatatattgattttatccaataaaagagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattcctc 48351433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 15790370 - 15790551
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||| || |||| | ||||||||||||||||||||| | |||||||||||||| | || |||||||||||||||||  ||  || |||    
T  15790370 atgctagcaacactcttttttgaataatctctctaatactcactctcttattggtttaaatcattat-ggcctacactttgaaaattgtcccaccataaa 15790468  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
     ||||  ||||||||||||||| ||||||||||  |||||||| |||| | ||| ||||||||||||| ||| ||||||||||    
T  15790469 atggtgagacatacattgattttatccaataaataagtaagtgttagaaaaagtgttgaaaagtgagttttgttagcattcct 15790551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 37600128 - 37600313
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| |||||||||||  || |||||| | | ||||| || ||| ||| || | ||||||||  |||| ||||||||| |    
T  37600128 aatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgtaggacctacactttagaaatggaacccacata 37600227  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||  | ||||| |||||||| |||||||||||    
T  37600228 aagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 37600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 46576126 - 46575945
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    ||||||||||||||| ||   |||||||||| ||||||||||||||| |  || |||||||| |||||| | |||| ||||||||| ||||||||| |||    
T  46576126 tgctagcaacactcttttc--aacactctctttaatactcactctctaatagggttaaatcaatgtggggcgtacattttgaaaatggaacccacaaaaa 46576029  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||||||||||| ||||| ||||||| ||||| |||| | |||||||| ||||| || |||||||| |||||||||||    
T  46576028 gtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatagcattcctc 46575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 50156654 - 50156831
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| || | ||||| |||| |||||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||     
T  50156654 agagtaatgttatcgacactttcttttgaacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccc 50156753  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgct 188  Q
    | |||||| || | ||||||||| ||||||| |||||||  |||||||     |||| || |||||||||||||||||||    
T  50156754 cgcaaagttgtggaacatacattaatttcattcaataaataagtaagt--atcagagtgtgttgaaaagtgagtgttgct 50156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 10948588 - 10948730
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||| ||||||||||||| | | |||||||||||||||||||| |||||||| ||||||||||  |||||||||||| | ||||||||| || || ||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtcca 10948687  T
Q  143 ataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||  ||| |||||| |||| ||| ||||||||||||||||    
T  10948688 ataaagaagtgagtgcttgagaaagtgttgaaaagtgagtgtt 10948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 40715915 - 40716049
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    ||||||||||||||  ||| ||| ||| |||||||||||||||||||||| |  | |||||||| |||||| |  |||||||||| ||||||||||||||    
T  40715915 gtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacattaatttcaccatataaaagagtgagtgctagagagag 40716014  T
Q  168 tattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    | |||||||||||||||||||| |||| |||||||    
T  40716015 tgttgaaaagtgagtgttgctaacatttctcgtta 40716049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 41387719 - 41387564
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||| |||||||| ||||| | | | |||||||||||||||||| ||||||||||||| |||||||||||| | ||  || |||||| |||||    
T  41387719 aacactctctccaatactcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgattt 41387620  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
     |||||||||| |||| ||||||||  ||||| ||||| | |||||||||||||||||    
T  41387619 aatccaataaatgagtgagtgctag--agagtgttgaataatgagtgttgctagcatt 41387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 22604710 - 22604570
Alignment:
Q  45 ctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaat 144  Q
    ||||||| |||||||||| |   ||||||||||||||| ||||||| |||||||||||||| | |||||| |||| ||||||||||| |||| |||||||    
T  22604710 ctctaattctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaat 22604611  T
Q  145 aaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||| |||| |||| || |||||||||| |||||| ||||||    
T  22604610 aaatgagtgagtgttaaagagagtattaaaaagtaagtgtt 22604570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 19345051 - 19345132
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||||||||||||||| ||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  19345051 tggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 54140891 - 54141080
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| |||| ||||||  ||||||||  | | ||| | |||||| ||| |  | |||||||||||||| ||||||||  |    
T  54140891 aatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgtagaacctacactttgaaaatggaacccacgta 54140990  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    ||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||  | |||||  ||||||| || |||| |||||||    
T  54140991 aagtggtgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagaaagtgttgttaacatttctcgtta 54141080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 2419484 - 2419596
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||||| ||| ||||||||||| ||| | |||||||||||||||||||||||||| ||| |||| |||| ||  |||||||||||||||| |||||||    
T  2419484 tgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcattgat 2419583  T
Q  135 ttcatccaataaa 147  Q
    | |||||||||||    
T  2419584 tccatccaataaa 2419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 50661576 - 50661700
Alignment:
Q  70 ttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||| |||||||| |||| |||| |||| ||||||||| |||||||| |||||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  50661576 ttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagtaagtgttagagagagt 50661675  T
Q  169 attgaaaagtgagtgttgctagcat 193  Q
     || ||||| |||||||||| ||||    
T  50661676 gtttaaaagagagtgttgcttgcat 50661700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 41707440 - 41707609
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    ||||||||||||||| | || |||||||||||| ||| ||| | | ||| | |||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  41707440 aatgctagcaacact-tattttgaacactctctttaacacttattttctta-tggtttaaattattgtgggtctatactttaaaaattgaacccacacaa 41707537  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||| |   |||||||||||||| ||||||| | ||||| |||| ||||||||||  | |||||||| ||||    
T  41707538 agtgatgaaacatacattgattttatccaatgagagagtgagtgttagagagagtgctcaaaagtgaatgtt 41707609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 13809261 - 13809083
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    ||||||||||||||| |  || ||||| ||||||| | ||| ||||| | ||| ||||| || |||||||| || |||||| |||| ||||||||| |||    
T  13809261 tgctagcaacactctttcttggacactttctctaacattcattctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaa 13809162  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagt-aagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
     |||| |||||||||||||||| ||||||||||||||| ||||  |||||||||| |  ||||| ||||||||||||||||    
T  13809161 atggtgggacatacattgattttatccaataaaagagtgaagt--tagagagagtgtgtaaaagagagtgttgctagcatt 13809083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 46237128 - 46237220
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgcta 189  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||  | ||||| |||||||||||    
T  46237128 aaatggaacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgttgcta 46237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 45515525 - 45515678
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||||||||| ||||||||| | ||||| |||||||  | ||||||||||||||||||||||| |||||   ||| | ||| ||||||||||||||||||    
T  45515525 ctctctaatattcactctcttattggtt-aaatcata-taggtctacactttgaaaattgaactcacactctgtgatgggatatacattgatttcatcca 45515622  T
Q  143 ataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| ||| |||| | |||||||| || ||||||||| |||| || ||||||||    
T  45515623 ataaaatagtgagtgttggagagagtgttaaaaagtgagcgttgttaacattcctc 45515678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 10769723 - 10769908
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||  ||||||||||| ||| |||||||||||  ||| ||||| | | | | | |||||| ||| || | ||||||||  |||| ||||||| | |    
T  10769723 aatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgtaggacctacactttagaaatggaacccatata 10769822  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| | |||||||||||  ||| ||||||||||  | ||||| ||||||||||||||||||||    
T  10769823 aagtggtgggacatacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattcctc 10769908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 44844167 - 44844026
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccca 108  Q
    |||||||| |||||| |||||||| |  ||||||||||||| ||||||| | | | ||| ||||||||||||||||| |||||||| |||||||||| ||    
T  44844167 gagtaatgatagcaagactctctttttgacactctctctaacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactca 44844068  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    ||  || |||| ||||||||||| |||| || ||||||||||    
T  44844067 catgaaatggtgggacatacatttattttattcaataaaaga 44844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 40702125 - 40702289
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtg 117  Q
    |||||||||||||||| |||| ||  ||||||||| |||   | | | |||||||||| | ||||| || | ||||| ||||||||||||||| ||||||    
T  40702125 ctagcaacactctcttttgaatacattctctaatattcaaatttttaatggtttaaattactgtggatcaaaactttaaaaattgaacccacataaagtg 40702224  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
     | |  |||||||| ||||||||  |||||||||||||||||  ||||||| |||||||||||||||    
T  40702225 atggatcatacattaatttcatcatataaaagagtaagtgct--agagagtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 752576 - 752461
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||| ||||||||||| || |||||| ||| |  |||||||| ||||| | | |||||||||||||||||||||||||||  |||| |||||||    
T  752576 agaggaatgccagcaacactctgttttgaacagtctat--aatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaaccca 752479  T
Q  109 cacaaagtggtaggacat 126  Q
    ||||||||||| ||||||    
T  752478 cacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 24748913 - 24749062
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| | | ||| | |||||| ||| || | ||||||||  |||| ||||||||| ||| ||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatg 24749012  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    || |||||||||||||| ||| || |||||||| | |||| |||||||||    
T  24749013 gtgggacatacattgatatcaccccataaaagaatgagtgttagagagag 24749062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 38414813 - 38414708
Alignment:
Q  29 ctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatac 128  Q
    ||||| ||| || ||||| ||| ||||||||||| | |||||||||| || |||| |||||||||| |||||| |||||||||||| |||| ||||||||    
T  38414813 ctcttttgagcattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatac 38414714  T
Q  129 attgat 134  Q
    ||||||    
T  38414713 attgat 38414708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 138921 - 138793
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||| |||| ||||||| ||||| | | || |||||||||||||  || |||| ||| |||||||||  || ||||| ||||  |||||||||||||||    
T  138921 aacaccctctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgattt 138822  T
Q  137 catccaataaaagagtaagtgctagagag 165  Q
    ||| |||||||||||| ||||||||||||    
T  138821 cattcaataaaagagtgagtgctagagag 138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 742140 - 742025
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||| ||||||||||| || |||||  | ||| ||||||||| ||||| | | |||||||||||||||||||||||||||  |||| ||| |||    
T  742140 agaggaatgccagcaacactctgttttgaac--tgtctataatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaatcca 742043  T
Q  109 cacaaagtggtaggacat 126  Q
    ||||||||||| ||||||    
T  742042 cacaaagtggtgggacat 742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 24429050 - 24429124
Alignment:
Q  40 actctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    ||||||||||||||||||| | | | |||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  24429050 actctctctaatactcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaa 24429124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 43657067 - 43657145
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagaga 164  Q
    |||||||||| |||| |||| |||| |||||||| |||||||||||||||||||| ||||||| ||| |||||||||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagaga 43657145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 198
Target Start/End: Complemental strand, 2009120 - 2008992
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||| |||||| ||||||||||| |||| |||| | ||| |||||||| ||||||||||| ||||||||  |||||||||| ||   || ||||||     
T  2009120 tttaaattattgtgagtctacactttaaaaactgaaactacataaagtggt-ggacatacattaatttcatctgataaaagagtgagcaataaagagagg 2009022  T
Q  169 attgaaaagtgagtgttgctagcattcctc 198  Q
     || ||||||||| ||||||||||||||||    
T  2009021 gttaaaaagtgagcgttgctagcattcctc 2008992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 7640589 - 7640778
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccca 108  Q
    ||||| |||||| ||||||||||| | ||||||||| | || |||||||  || | |||||| |||||  ||| |||| |||||| | |||| |   |||    
T  7640589 gagtagtgctagtaacactctcttttcaacactctcacaaacactcacttccttattggtttcaatcaaggtgagtctcacacttaggaaataggttcca 7640688  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |  || ||||||||||||||||| |||||||||||||| | || ||||| ||||| |||| |||||||| ||||||  ||||||||||||    
T  7640689 cttaatgtggtaggacatacattaatttcatccaataagaaagcaagtgttagagtgagtgttgaaaagagagtgtccctagcattcctc 7640778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 29388614 - 29388687
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||| || |||||||| | ||  ||||||||||||| |||||||||||||||||||||||||    
T  29388614 tgaacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaattgaaccca 29388687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 30624739 - 30624633
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    |||| |||||||||||||| |||||||||||||   ||||||||| |||| || |||||||||||| |||| ||||||| |   | ||||||||||||||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagagtgc--tcaaaagtgagtgttg 30624642  T
Q  187 ctagcattc 195  Q
    |||||||||    
T  30624641 ctagcattc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 10769791 - 10769719
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | ||||| |||||||  |||||||||||    
T  10769791 tacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattcctc 10769719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 54140959 - 54140887
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||||||||| |||| ||||||||||| |||  | ||||| ||||||||||||||||||||    
T  54140959 tacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattcctc 54140887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 43016598 - 43016440
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||| |||||||| || ||||||| | || ||||||||||||||| | || ||||||||||| ||  |||| ||||| ||||||||||  ||    
T  43016598 gagtaatgctagaaacactctattttgaacacccactgtaatactcactctcttattgatttaaatcattatgaatctatactttaaaaattgaactaac 43016499  T
Q  110 acaaagtggtaggac--atacattgatttcatccaataaaagagtaagtgctagagaga 166  Q
    ||| ||| ||  |||  |||||||||||||||  ||||||| ||| | || ||||||||    
T  43016498 acagagtagtgcgacatatacattgatttcatttaataaaaaagtgaatgttagagaga 43016440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 29389103 - 29389193
Alignment:
Q  105 cccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||| |||||||||| |||||||||||||||| || |||| ||||||| |||| || || ||||  | |||||||||||||||||||||||    
T  29389103 cccatacaaagtggtgggacatacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcattc 29389193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 39186150 - 39186028
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||| |||||||||||| |||| |||||||| ||||| | |||||| | || ||||||||||||  | ||||||||||| |||| |||| |     
T  39186150 agagtagtgctatcaacactctcttttgaatactctctccaataccctctctcttattgatttaaatcattgcagatctacactttggaaatagaactcg 39186051  T
Q  109 cacaaagtggtaggacatacatt 131  Q
    || ||||||||  ||||||||||    
T  39186050 cataaagtggtgagacatacatt 39186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 21232604 - 21232705
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    |||| ||||||||| |||||||| | |||||||||||||||| ||||||||| | | ||||||| ||| |||  | ||||| | ||||||||||||||||    
T  21232604 aaatggaacccacataaagtggtggaacatacattgatttcacccaataaaaaaatgagtgctaaagaaagtgctcaaaagagggtgttgctagcattcc 21232703  T
Q  197 tc 198  Q
    ||    
T  21232704 tc 21232705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 49072134 - 49072057
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaa 143  Q
    |||||||||| ||||||||||||||||||||||||  ||| || ||||||||||  |||||| ||| |||||||||||    
T  49072134 tggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaatttcatccaa 49072057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 37600196 - 37600124
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||| |||||||||||||  ||||||||||||||  | ||||| ||||||||||||||||||||    
T  37600196 tacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattcctc 37600124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 52951475 - 52951543
Alignment:
Q  130 ttgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||| | ||||| ||||||||||||||| || ||||| |||||||||||||| |||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagcactcctc 52951543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 357869 - 357790
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||| |||| ||||||||| ||||||||  | ||||||||||||||   |||||||||||| ||||||||||||    
T  357869 ctacactttggaaatggaacccacataaagtggtgaggcatacattgatttccctcaataaaagagtgagtgctagagag 357790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 24748976 - 24748913
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgcta 189  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  | ||||| |||||||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 38928007 - 38928190
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgt-gggtctacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| |||| ||||||| ||||||||| | | ||| | |||||| |||  |  |||||||||| |||| ||||||| | |    
T  38928007 aatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgtaagacctacactttggaaatggaacccatata 38928106  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    |||| |  ||| |||||||||||| | ||||||||||| | | | ||||||| |||    |||||  |||||||||||||||||    
T  38928107 aagtagagggatatacattgattttacccaataaaagactgaatactagagatagtgcacaaaagatagtgttgctagcattcc 38928190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 38138589 - 38138695
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||||||||| ||| |||| | | ||||||| ||||||| | |||||||||||||||||| |||| |||||||| || ||| | ||||||| |||| |    
T  38138589 caacactctcttttgatcactttatttaatacttactctcttattggtttaaatcattgtggatctatactttgaagatagaaactacacaaaatggtgg 38138688  T
Q  122 gacatac 128  Q
    || ||||    
T  38138689 gatatac 38138695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 27243047 - 27243092
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactct 27243092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 29775202 - 29775136
Alignment:
Q  130 ttgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| |||||||||||||  ||||||||||||||  | ||||| ||||||||||||||||||||    
T  29775202 ttgatttcacccaataaaagagt--gtgctagagagagtgctcaaaagagagtgttgctagcattcctc 29775136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 38928075 - 38928006
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||||||||| ||||||||||||| |||| |||||| |||  | ||||| |||||||||||||||||    
T  38928075 tacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 52951377 - 52951446
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgg 83  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| | |||||| |||||    
T  52951377 aatgctagcaacactctctttttaacactctctcaaatactcactctatcattggatgaaatcaatgtgg 52951446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 55283167 - 55283236
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||||| ||||||||| ||| |||||| || ||||||| || |||||||||||||| |||||||    
T  55283167 atacattgattttatccaataatagaataagtgttaaagagagtgtttaaaagtgagtgttgttagcatt 55283236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 42340958 - 42340874
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||||||||||||||| ||||||||||||| | || | ||||||||||  ||||| |||| || || || |||||||||||    
T  42340958 gtttaaatcattgtgggtctgcactttgaaaattaagccaatacaaagtggtgagacatgcatttatatcttctaataaaagagt 42340874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 18722595 - 18722641
Alignment:
Q  154 agtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||    
T  18722595 agtgctagagagagtgtagaaaagtgagtgttgttagcattcctcgt 18722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 41607537 - 41607459
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||||| | ||||| ||||||||||||||||| ||| |||||||| | ||  |||||| ||||||| |||||||||||    
T  41607537 tttaaataactgtggatctacactttgaaaattaaactcacacaaaatagtgagacatatattgattacatccaataaa 41607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 35094108 - 35094177
Alignment:
Q  99 attgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||| |||||||| | |||| ||||| ||| ||||||| ||||||||||| || |||||||||||||    
T  35094108 attgaactcacacaaattagtagaacatatattaatttcattcaataaaagagcaaatgctagagagagt 35094177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 37285435 - 37285318
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||||||||||| ||| | | | |||||||||| ||||||||||| |||||| |||||  |||||| | ||| ||||  |||||||||  |||||||| |    
T  37285435 ctctctaatacttacttttttattggtttaaattattgtgggtctgcactttaaaaataaaacccataaaaaatggtgcgacatacatgaatttcatcta 37285336  T
Q  143 ataaaagagtaagtgcta 160  Q
    | |||| ||| |||||||    
T  37285335 acaaaaaagtgagtgcta 37285318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 52951537 - 52951476
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatca 77  Q
    |||||||||||||||||| | |||||||||||||  ||||||||||||| ||| | ||||||    
T  52951537 tgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatca 52951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 36751106 - 36750974
Alignment:
Q  25 cactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggac 124  Q
    ||||||||| || | | ||||||||| | | ||||||| | | |||| ||||| |||| |||||||||||  ||||  |||| ||| |||||||||||||    
T  36751106 cactctcttttggataatctctctaacatttactctcttattagttttaatcaatgtgagtctacactttagaaatgaaacctacataaagtggtaggac 36751007  T
Q  125 atacattgatttcatccaataaaagagtaagtg 157  Q
    || || ||||||||| || ||| ||||| ||||    
T  36751006 atgcactgatttcattcagtaagagagtgagtg 36750974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 52951444 - 52951376
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||||||||||| | ||||| |||  | |||||||| || ||||| |||||||||||||||||    
T  52951444 acattgatttcatccaatgatagagtgagtatttgagagagtgttaaaaagagagtgttgctagcattc 52951376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 29718846 - 29718952
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgt-gggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||| || |||||| |||||||  | | ||||||| | ||| | | | |||||||| ||||| |||||||||||| ||||||||||||||    
T  29718846 gagtaatgctagcatcattctcttttgaacaccttatttaatacttattcttt-attagtttaaattattgttgggtctacacttagaaaattgaaccca 29718944  T
Q  109 cacaaagt 116  Q
    || |||||    
T  29718945 caaaaagt 29718952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 40631257 - 40631194
Alignment:
Q  131 tgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| | |||||||||  ||||||| ||||||| || ||||||||||||||||| |||||||    
T  40631257 tgatttaagccaataaaaatgtaagtgttagagagtgtgttgaaaagtgagtgttgttagcatt 40631194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 7419241 - 7419323
Alignment:
Q  78 ttgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgcta 160  Q
    |||||| ||||||||||| |||| |||| |||||||| | |  ||||||| ||| |||| ||| ||||||||||| |||||||    
T  7419241 ttgtggatctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtgagtgcta 7419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 20493629 - 20493579
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactc 59  Q
    |||| |||||||||||||||| ||| | |||||||||||||| ||||||||    
T  20493629 agaggaatgctagcaacactcacttttcaacactctctctaacactcactc 20493579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 49418424 - 49418518
Alignment:
Q  20 agcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaa-tcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||||||||| |||||| |||||||| || ||||||||| | || |||||| | ||| |||||||| || ||| ||||  |||||||||||    
T  49418424 agcaacactctcttttgaacattctctctagtattcactctcttattgatttaaatttattatgggtctaaacgttggaaatataacccacacaa 49418518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 18722535 - 18722572
Alignment:
Q  110 acaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  18722535 acaaaatggtgggacatacattgatttcatccaataaa 18722572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 37926690 - 37926561
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtcta-cactttgaaaattgaacccacacaaagtggtaggacatacattgatt 135  Q
    |||| ||||||||| ||| |||||||   ||| |||||||| ||| ||||   |||||||||||| |  |||||| ||||| ||||||| ||||||||||    
T  37926690 aacattctctctaacacttactctcttgttgggttaaatcaatgtaggtcccgcactttgaaaatgggtcccacataaagtagtaggacctacattgatt 37926591  T
Q  136 tcatccaataaaagagtaagtgctagagag 165  Q
    ||| | ||||| | ||| |||| |||||||    
T  37926590 tcacctaataagaaagtgagtgttagagag 37926561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 39185306 - 39185237
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||||| || ||||||| ||| ||||||| ||||||| |  ||||||||||||| ||| |||||    
T  39185306 tacattgatttcttcaaataaaatagtgagtgctaaagagagtgtgcaaaagtgagtgttactaacattc 39185237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 43657938 - 43657870
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatca 77  Q
    ||||||||||||||||||||||||| | |||||| | || || ||||||| ||| | ||| ||||||||    
T  43657938 agagtaatgctagcaacactctctttttaacactgtttccaacactcactttctaattggcttaaatca 43657870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 55283103 - 55283151
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcac 57  Q
    |||||||||||| ||||||||| || | |||| ||||||||||||||||    
T  55283103 agagtaatgctaacaacactcttttttaaacattctctctaatactcac 55283151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 34905522 - 34905337
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  34905522 agagtgatgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccca 34905423  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
     |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||    
T  34905422 aacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 445976 - 445815
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||  |||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  445976 aacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgattt 445877  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||| ||| ||||||||||| ||| ||||||| ||||| |||||||||||||||    
T  445876 catccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcctc 445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 5106480 - 5106308
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    |||||||| |||||| ||||| ||||||| |||||||||| ||||||| | | ||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  5106480 taatgctaacaacaccctcttttgaacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacaca 5106381  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||| |||||| ||| ||||||||||||||||    
T  5106380 aagtggtgggacatacattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 10133165 - 10133338
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||||||||| |||| |||| || ||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||| || |||||||| |    
T  10133165 caacactctcttttgaatactcactttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgg 10133264  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||| | ||||||||||||||| |||| |||| |||||||||| |||||||||||||||| ||| |||||    
T  10133265 gacatacaataatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgtttctaccattc 10133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 21987478 - 21987292
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||| ||| ||||| |||||||||||||||||||||||| ||| | ||||||||||||||| || ||||||||||| |||| |||| |     
T  21987478 agagtagtgctagcaccaccctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcg 21987379  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| ||| |||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||| ||||||||    
T  21987378 cataaagtggtgggatatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcattc 21987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 31116146 - 31116296
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||| |||| |||| |||||||||| || ||||||||||||||||    
T  31116146 aacactctctctaatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgattt 31116245  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgc 187  Q
    ||||||||| |||||| | || |||||||||| || |||||||||||||||    
T  31116246 catccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 1392813 - 1392630
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||||||||||||||||||| ||||| ||| |||||||||| ||    
T  1392813 agagtaatgctagcaacactctcttttgaacaccctatctaatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacaca 1392715  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||||||| ||  ||||||||||||||||||||||||||| |   ||||||  ||||||| || ||||||||||||| ||| |||||    
T  1392714 tacaaagtagtgagacatacattgatttcatccaataaaaaatagagtgct--agagagtgttaaaaagtgagtgttactaacattc 1392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 16851967 - 16852105
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||| ||||||||||||||||| ||||||  ||| ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||     
T  16851967 agagtaaggctagcaacactctcttttgaacatcctccctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccc 16852066  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaa 147  Q
     |||||||||| ||||||||||| |||||||| ||||||    
T  16852067 tacaaagtggtgggacatacatttatttcatctaataaa 16852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 12753763 - 12753943
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtg 117  Q
    |||||||||||||||| | ||||||||||||||||||| |||| | | | ||||||||||||||| || |||||  ||||||| ||||||||||||||||    
T  12753763 ctagcaacactctcttttcaacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtg 12753862  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || |||||| |||  |||| ||||||| ||||||| | ||||| | ||||| || ||||||||||||||||||||||||||    
T  12753863 gtgggacatgcatgtattttatccaatgaaagagtgattgctataaagagtgttcaaaagtgagtgttgctagcattcctc 12753943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 19090213 - 19090398
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||| | | ||||| || ||| ||| || | ||||||||| |||| ||||||||| |    
T  19090213 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacata 19090312  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||  | ||||| |||||||| |||||||||||    
T  19090313 aagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 19090398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 32112725 - 32112850
Alignment:
Q  23 aacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg 122  Q
    ||||||||||| |||||| ||||||||||| ||||||||| | || ||||||||||||||| ||||||||||||||||  |||||||||||| ||||  |    
T  32112725 aacactctcttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtg 32112824  T
Q  123 acatacattgatttcatccaataaaa 148  Q
    |||| |||||||||||||||||||||    
T  32112825 acatgcattgatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 37 - 199
Target Start/End: Complemental strand, 2676053 - 2675891
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||| | | | ||||||||| ||||||||||||||| |||||||||| |||| | |||||||||| ||||||||||||| ||    
T  2676053 aacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaatt 2675954  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
    ||| |||||||||||| | || || | | | | ||||||| |||||||||||| | |||||||    
T  2675953 cattcaataaaagagtgaatgttaaaaaaaatgttgaaaaatgagtgttgctaccgttcctcg 2675891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 32122953 - 32122796
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||| |||||| || ||||| | | | ||| |||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||| ||||||||    
T  32122953 aacactatctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgattt 32122854  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||||  ||| |||| | || ||||| |||||||| |||||||| |||||||    
T  32122853 catccaataaataagtgagtggtggaaagagtgttgaaaagagagtgttgttagcatt 32122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 17144669 - 17144822
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||| ||||||||| |||  | |||||||| ||||||| ||||  | | | |||||||||||||||||||||||||||||||||| |||| |||    
T  17144669 agtaatgctaacaacactctttta--accactctctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatttaacctaca 17144766  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagaga 166  Q
    ||||  ||| | ||||| ||||||||||| |||||||| |||||||||||||||||    
T  17144767 caaaacggtggaacatatattgatttcattcaataaaatagtaagtgctagagaga 17144822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 35128794 - 35128900
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||| | ||||||||||||| | ||||||||||||| || ||||| |||||||    
T  35128794 ctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgtt 35128893  T
Q  186 gctagca 192  Q
    |||||||    
T  35128894 gctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 19737433 - 19737588
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| |||||| ||||||||  ||||||||| | | ||| | |||||| ||| || | ||||||||| ||||  |||||||| |    
T  19737433 aatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccacata 19737532  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||| ||||| |||||||||||||| ||||| ||||||| |||||||||||||||    
T  19737533 aagtgataggatatacattgatttcacccaattaaagagtgagtgctagagagagt 19737588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 12780758 - 12780897
Alignment:
Q  12 gtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacac 111  Q
    ||||||||||||| ||||| ||  |||||| |||||||||| ||| || || | |||||||||||||||||| |||||||||||||||||||||| ||||    
T  12780758 gtaatgctagcaatactctttt--gaacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacac 12780855  T
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagta 153  Q
    ||||| ||  |||||||||||||| || | ||||||| ||||    
T  12780856 aaagtagtgagacatacattgattccacctaataaaaaagta 12780897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 31444144 - 31443955
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||| || |||||||||||  |||||| ||||||||||| ||||    ||| |  |||||||| ||||| ||| ||||||||||||||||||| ||    
T  31444144 gagtaatgttaacaacactctctcttgaacattctctctaatattcacgtgttcattaatttaaatccttgtgagtcaacactttgaaaattgaaccgac 31444045  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
    ||||| |||| | ||||| ||| |||||||||||||||||| | |||| || | ||||| ||||||| | | |||||||||| |||||||    
T  31444044 acaaaatggtggaacataaattaatttcatccaataaaagaatgagtgttaaaaagagtgttgaaaaattattgttgctagccttcctcg 31443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 10061036 - 10060856
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||||| ||| |||||||||||| ||||||| | | | ||| | | |||| ||| || | |||||||||||||| ||||||||| ||||||    
T  10061036 tagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacccacataaagtg 10060937  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |  ||||||||||||||||||   ||||||||||| | || || | ||||| || ||||| ||||||||||||||||||||    
T  10060936 gcgggacatacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgttgctagcattcctc 10060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 16187428 - 16187558
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| ||||||||||||||| | ||||||||  ||||||||||||| || | |||||||||| ||||| |||||||||||||||||||||||  |    
T  16187428 agagtaatgttagcaacactctcttttcaacactct--ctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaactta 16187525  T
Q  109 cacaaagtggtaggacatacattgatttcatccaa 143  Q
    |||||| |||| ||  |||||||||||| ||||||    
T  16187526 cacaaaatggtggg--atacattgatttaatccaa 16187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 8441869 - 8442020
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||||||||||||||||||||||| | | ||||||| || ||||  ||||||||||||||||||||||| | |||||||            || ||||    
T  8441869 tgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaag------------caatgat 8441956  T
Q  135 ttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| |||| |||| |||||||||| ||||||| |||||| ||||||||||||||    
T  8441957 ttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8442020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 8450673 - 8450824
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||||||||||||||||||||||| | | ||||||| || ||||  ||||||||||||||||||||||| | |||||||            || ||||    
T  8450673 tgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaag------------caatgat 8450760  T
Q  135 ttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| |||| |||| |||||||||| ||||||| |||||| ||||||||||||||    
T  8450761 ttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 32598947 - 32599085
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||| |||||||| |||||| | |||| ||||| ||||||||||||| | | || ||||||||||||||  ||||||||||| |||| | ||||||||||    
T  32598947 aatgttagcaacattctcttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaa 32599046  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||  ||||||||||  ||| ||||||||||||||||    
T  32599047 agtggcgggacatacatgtattccatccaataaaagagt 32599085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 6531369 - 6531481
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||| | |||| |||| |||| ||||| || |||||||||||||||||| ||||||||||||| |||||| ||||||||  | ||||| |||||||    
T  6531369 ctacacttcggaaatggaactcacataaagtagtgggacatacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgtt 6531468  T
Q  186 gctagcattcctc 198  Q
    |||||||||||||    
T  6531469 gctagcattcctc 6531481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 16187650 - 16187776
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    ||||| ||||||||||||||| | ||||||||  ||||||||||||| || | |||||||||| ||||| |||||||||||||||||||||||  |||||    
T  16187650 taatgttagcaacactctcttttcaacactct--ctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacaca 16187747  T
Q  113 aagtggtaggacatacattgatttcatccaa 143  Q
    || |||| ||  |||||||||||| ||||||    
T  16187748 aaatggtggg--atacattgatttaatccaa 16187776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 12784934 - 12785072
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||| | | |||| |||| || || |||||||  || ||||| | |||||||||||||| ||| |||||||||||||||||||||  ||    
T  12784934 gagtaatgctagcaatattgtcttttgaataccctttctaatatccattctcttattggtttaaatcattatggatctacactttgaaaattgaactaac 12785033  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    | ||||| ||| |||||||||||||| || |||||||||    
T  12785034 ataaagtagtaagacatacattgattccacccaataaaa 12785072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 16436250 - 16436108
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| ||||||||||||||| | |||||||| | ||||| ||| ||  | | ||||||||||| || ||||||||||||||  |||| |||||||    
T  16436250 agagtaatgttagcaacactctcttttaaacactctttttaatattcagtcgattattggtttaaatctttttgggtctacactttagaaatagaaccca 16436151  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||| |||| || ||||||||||||||||  ||| |||||||    
T  16436150 cacaaaatggt-gggcatacattgatttcatataatgaaagagt 16436108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 12690438 - 12690244
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccca 108  Q
    ||||||||||| ||| |||||||| | ||||  ||||| || |||| ||  || | ||||||||||||  |||||||| |||||||| |||| ||  |||    
T  12690438 gagtaatgctaacaatactctcttttcaacatcctctcaaacactctcttccttattggtttaaatcaaggtgggtctcacactttggaaatagattcca 12690339  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |  ||||||||  ||||| |||| ||||||||||||||||||| ||||| |||||||||| || ||||  ||||||  |||||||||||| ||||    
T  12690338 cttaaagtggtgagacatgcattaatttcatccaataaaagagcaagtgttagagagagtgtttaaaatagagtgtccctagcattcctcattat 12690244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 4595850 - 4595769
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||||||||| ||||||| | ||||||||  |||||||||||||||||  |||||||||||| |||||||||||||||    
T  4595850 tacactttgaaaatggaacccataaaaagtggtgagacatacattgatttcactcaataaaagagtgagtgctagagagagt 4595769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 12327287 - 12327358
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||| | |||||||||||||    
T  12327287 aaatagaacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagagagt 12327358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 13001876 - 13001692
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||| | |||||||||| | ||  ||||||  |||| ||||||| | | ||||||||||| || | ||| |||| |||| |||||||| |||||    
T  13001876 agtaatgctaacgacactctcttttaaattctctcttcaatattcactcttttattggtttaaatctttataggtttacattttgcaaattgaatccaca 13001777  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||| || |  |||||||||| |||| ||||||| ||| | | | || ||||||||||  ||||||||||||||| |||||||||    
T  13001776 taaaatgatgtgacatacatttattttatccaatgaaaaaatgaatgttagagagagtgctgaaaagtgagtgttactagcattc 13001692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 19090281 - 19090209
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||| ||||||||||||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  19090281 tacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 19090209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 373508 - 373396
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||| |||||||||| ||| ||||| |||||| | |||||||||||||||| | ||||||||| |||  ||||||||||||||  | ||||  || ||||    
T  373508 ctaccctttgaaaatggaatccacataaagtgctgggacatacattgattttacccaataaaaaagtgggtgctagagagagtgctcaaaaaagaatgtt 373409  T
Q  186 gctagcattcctc 198  Q
    | |||||||||||    
T  373408 gttagcattcctc 373396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 2931660 - 2931576
Alignment:
Q  96 aaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtga 180  Q
    |||||||||||  |||||| ||||||||||||||||||||||||| ||||||  ||  | || |||||||||| |||||||||||    
T  2931660 aaaattgaaccaccacaaaatggtaggacatacattgatttcatcaaataaataagcgaatgatagagagagtgttgaaaagtga 2931576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 19737501 - 19737431
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    ||||||||||| | ||||||||||||| |||| |||||||| | || ||||| ||||||||||||||||||    
T  19737501 tacattgatttgagccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 900084 - 899943
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcact-ctc-----tcagtggtttaaatcattgtgggtctacactttgaaaattga 103  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||| ||| |||     | | |||||||| |||||||||||||| | | ||||||||||    
T  900084 gagtaatactagaaacactctcttctgaacactctctctaatacttactactcctattttattggtttaattcattgtgggtctatattatgaaaattga 899985  T
Q  104 acccacacaaagtggtaggacatacattgatttcatccaata 145  Q
    |||| |  ||| | || | |||||  ||||||||||||||||    
T  899984 acccccgtaaaatagtggaacatatgttgatttcatccaata 899943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 17226645 - 17226716
Alignment:
Q  131 tgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    |||||||||||||||||||||| | ||||| ||||||| || | ||| |||||||| ||| |||||||||||    
T  17226645 tgatttcatccaataaaagagtgaatgctaaagagagtgttcagaagagagtgttgttagtattcctcgtta 17226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 9940427 - 9940387
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagaga 166  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  9940427 tacattgatttcacccaataaaagagtgagtgctagagaga 9940387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 12780894 - 12780930
Alignment:
Q  166 agtattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12780894 agtattgaaaagtgagtgttgttagcattcctcgtta 12780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 373504 - 373555
Alignment:
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||| | ||||||||||| ||||||||||| |||||||| ||||||||||    
T  373504 ggtaggtcctacattgattttatccaataaaatagtaagtgttagagagagt 373555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 6109963 - 6109916
Alignment:
Q  103 aacccacacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    |||||||| ||||||||||||||| ||||||||| || ||||||||||    
T  6109963 aacccacataaagtggtaggacatgcattgattttattcaataaaaga 6109916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 35128900 - 35128867
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctcta 49  Q
    |||||||||||||||||| |||||||||||||||    
T  35128900 tgctagcaacactctcttttgaacactctctcta 35128867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 10060973 - 10061045
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| ||| ||||||||| ||| |||| ||||||||||  | ||||| |||||||||||  |||||||    
T  10060973 tacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgctaatattcctc 10061045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 12753811 - 12753755
Alignment:
Q  142 aataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||  |||  |||||||||| |||||||| |||||||||||| |||||||    
T  12753811 aataaaagagcgagtattagagagagtgttgaaaagagagtgttgctagtattcctc 12753755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 19305833 - 19305789
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||||| | |||||| |||||||| ||||||||    
T  19305833 tgctagcaacactctcttttaaacactatctctaatcctcactct 19305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 2e-72; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 26767755 - 26767944
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||| | | ||||||||||||||||| ||||||| ||||||||||||||||     
T  26767755 agagtaatgctagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccct 26767854  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  26767855 cacaaagtggtgggacatacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcctc 26767944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 6980114 - 6980299
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| | | ||| ||||||||||||||||| |||||||||||||||| ||    
T  6980114 agagtaatgcttgcaacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactca 6980213  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  6980214 cacaaagtggtagaacataccttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 9470272 - 9470082
Alignment:
Q  3 ttaaagagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattg 102  Q
    ||||| ||||| ||||||||||||||||||| |||| || |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  9470272 ttaaaaagagtgatgctagcaacactctcttctgaa-accctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattg 9470174  T
Q  103 aacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||  ||||||| ||||| |||||||||||    
T  9470173 aacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagcgttgaaaaatgagtattgctagcatt 9470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 12989370 - 12989188
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | |||| ||| ||| ||||||    
T  12989370 tgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaag 12989271  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| |||||||||||||||||||||||| ||||||| ||||  | ||||||| |||||||||||||||||||||||||||||    
T  12989270 tggtgggacatacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattcctc 12989188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 38464342 - 38464161
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38464342 tgctagcaatactctcttttgaacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaag 38464243  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    || |  |||||||||||||||||| |||||||| ||||| ||  ||||||||| ||||||||||| ||||  ||||||||||    
T  38464242 tgatgagacatacattgatttcatacaataaaaaagtaattgtcagagagagtgttgaaaagtgaatgttcttagcattcct 38464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 45554741 - 45554567
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    ||||| || |||||||||||| |||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||        ||    
T  45554741 taatgataacaacactctcttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------ca 45554650  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  45554649 aagtggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 44274420 - 44274236
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||||| |||||||||||| | || | ||||||||| ||||||||| | | |||||||||||||||||| |||||||||||||| |||||||||    
T  44274420 agaggaatgctaacaacactctcttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaaccca 44274321  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||| | || ||||||||||  |  |||||||||||||||||||||    
T  44274320 cacaaagtggtgggacatacattgattttatccaatgaaagagtgaatgttagagagagtgct-caaagtgagtgttgctagcatt 44274236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 10981695 - 10981515
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    |||||||||||||||||   |||||||| |||||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  10981695 tgctagcaacactctcta--gaacactccctctaatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaag 10981598  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| |||||||||||  |||||| ||||| || ||| |||| |||||||||| || |||||||||| ||| || ||||||||    
T  10981597 tggtgggacatacatttttttcattcaatagaaaagtgagtgttagagagagtgttcaaaagtgagttttgttatcattcctc 10981515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 11539583 - 11539420
Alignment:
Q  38 acactctctctaatactcactctctcagtggtttaaatca-ttgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacat--tgat 134  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||| |||||||||||||||| |||| ||||||||||| | | ||||||||  ||||    
T  11539583 acactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgat 11539484  T
Q  135 ttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||||| ||||||||| ||||| || |||| ||||||||| |||||||||||    
T  11539483 ttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattcctc 11539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 36471833 - 36472021
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||| ||||  || | || ||||||||||||||||||||| | | ||||||||||||||||| || |||| ||||||||||||| |||     
T  36471833 gagtaatgctagcaaaactccttttttaagactctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccat 36471932  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | ||||||||  ||||||| ||||||||||||||||| ||| | ||||  ||||||||| |||||||||||||||| ||| ||||||||    
T  36471933 aaaaagtggtgagacatactttgatttcatccaataagagattgagtgtcagagagagtgttgaaaagtgagtgttactatcattcctc 36472021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 18511260 - 18511392
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||| ||| | || |||||||||||||||| ||||||||||||||| |||| ||| |||    
T  18511260 tggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtgag 18511359  T
Q  166 agtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| || ||||||||||||||||||||||||||    
T  18511360 agtgttaaaaagtgagtgttgctagcattcctc 18511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 32856129 - 32856322
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||| |||||||||||| || ||||||| || ||||||||||| ||||| | |||||||||||| | ||| ||||||||||||||||| ||||||    
T  32856129 agagaaatgttagcaacactctattttgaacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaaccca 32856228  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg----ctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||   ||||| ||| ||||||||| |||||||||| ||||    || |||||||| || |||||||||||||| |||||||||||    
T  32856229 cacaaagtggtgaaacatatattaatttcatccgataaaagagtcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattcctc 32856322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 28898035 - 28898220
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| |||  ||||||| ||  ||||||||| | | ||| | |||||| ||| || ||||||||||| ||||  |||||||| |    
T  28898035 aatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacata 28898134  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||  | ||||  ||||||||||||||||||||    
T  28898135 aagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctc 28898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 16719481 - 16719609
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||  || |||| ||| |||||||||||||||| |||||||||||| |||||| |||     
T  16719481 tggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaagac 16719580  T
Q  166 agtattgaaaagtgagtgttgctagcatt 194  Q
    ||| |||||||||||||||||||||||||    
T  16719581 agtgttgaaaagtgagtgttgctagcatt 16719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 34142141 - 34142319
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagt 116  Q
    |||||||||||||||||  ||| | | ||| ||||| ||||||||| | ||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  34142141 gctagcaacactctctttagaatattttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagt 34142240  T
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||  |||||||||  |||||||||||||||| ||| | || | |||||| | ||||||||| |||||||||| |||||    
T  34142241 agtgagacatacatgaatttcatccaataaaaaagtgaatgtttgagagattgttgaaaagtaagtgttgctaacattc 34142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 42183071 - 42182889
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||| ||||||||||| |||||||||||||    ||| ||||| | | ||| | |||||| ||| || | ||||||||| |||| ||||||||| |    
T  42183071 aatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacata 42182972  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||  | ||||| |||||||||||||||||    
T  42182971 aagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 4964671 - 4964856
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    ||||||||||| |||||||| |||| ||||||||||  ||||||||| | | ||| | | |||| ||| || | ||||||||||||||  || ||||| |    
T  4964671 aatgctagcaatactctcttttgaatactctctctagcactcactcttttattggataagatcaatgtaggacctacactttgaaaatgaaatccacata 4964770  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||| | ||||| || |||||||||||||||||    
T  4964771 aagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgttgctagcattcctc 4964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 19639278 - 19639090
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| ||||| | |||| |||| |  |||| ||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||    
T  19639278 gagtaatgctaacaacattttcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcac 19639179  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || | ||| |  ||||||||||||||||||| ||||||| ||| | |||| |||||||| || ||||||||| | || |||||||||||    
T  19639178 actatgtgatgagacatacattgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagtgagcgctgttagcattcctc 19639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 19837871 - 19837683
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| ||||| | |||| |||| |  |||| ||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||    
T  19837871 gagtaatgctaacaacattttcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcac 19837772  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || | ||| |  ||||||||||||||||||| ||||||| ||| | |||| |||||||| || ||||||||| | || |||||||||||    
T  19837771 actatgtgatgagacatacattgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagtgagcgctgttagcattcctc 19837683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 17188194 - 17188062
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||||| |||| ||||||||||||||||||   |||||||||||||  || | |||||||||||||||||||||| ||| |||| |||||||    
T  17188194 tggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtgagtgatagagag 17188095  T
Q  166 agtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||  ||||||||||||||||| || ||||||||||    
T  17188094 ag--ttgaaaagtgagtgttggtaacattcctcgt 17188062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 3804711 - 3804585
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg-acatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    ||||||| ||||||||| ||||||||||||||| |||| ||| |||||| | || |||||||||||||||||||||||||||||| | || || ||||||    
T  3804711 tttaaattattgtgggtgtacactttgaaaattaaacctacataaagtgatggggacatacattgatttcatccaataaaagagtgaatgttaaagagag 3804612  T
Q  168 tattgaaaagtgagtgttgctagcatt 194  Q
    | ||||||||||||||| |||||||||    
T  3804611 tgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 12098862 - 12099053
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcatt-gtgggtctacactttgaaaattgaaccc 107  Q
    |||||||||||||||||| ||| ||  ||||||||| |  |||||||||||||| | | |||||||||||| ||| || ||||||||||||||||||| |    
T  12098862 agagtaatgctagcaacattctatttggaacactcttt--aatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactc 12098959  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtt 201  Q
    | |||||||||   ||||||| ||||||||||| ||||||| ||  | ||||| |||||   |||||||| ||||||||||| |||||||||||    
T  12098960 atacaaagtggcgagacatactttgatttcatcaaataaaatagcgaatgctaaagagaaagttgaaaagagagtgttgctaacattcctcgtt 12099053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 15884614 - 15884471
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||  | || ||||||| ||| |||  ||||||||||||| | ||| | |||||||||| |||||||||||||| ||||||||||||||||||    
T  15884614 gagtaatgctgacgacgctctcttttgaccacaatctctaatactcattatcttattggtttaaataattgtgggtctacattttgaaaattgaacccac 15884515  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    |||||||||| ||    ||||||||||| |||||||||||||||||||    
T  15884514 acaaagtggtggg----acattgatttcgtccaataaaagagtaagtg 15884471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 35316397 - 35316538
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    ||||||||||| ||||||||||| ||| |||||| | | ||||||||||||| | || |||||||||||||||||||||| ||| ||||||||| | |||    
T  35316397 agtaatgctagtaacactctcttttgagcactctttatgatactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaaca 35316496  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
     ||| |||| ||||||||||| |||| ||| |||||||||||    
T  35316497 taaaatggtgggacatacattaattttatctaataaaagagt 35316538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 15509107 - 15508911
Alignment:
Q  3 ttaaagagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaatt 101  Q
    ||||| |||| |||| ||||||||||||||| | | |||||||| ||  ||| ||||| | | ||| | |||||| ||| || ||||||||||| ||||     
T  15509107 ttaaaaagaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgtaggatctacactttggaaatg 15509008  T
Q  102 gaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| ||| |||| ||||||||||||||||||  |||||||||||| |||| |||| ||||| || ||||| ||||||||||| ||||||||    
T  15509007 gaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgctaacattcctc 15508911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 30718350 - 30718497
Alignment:
Q  38 acactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttc 137  Q
    ||||||||||||||| ||||| | | | ||||||||||||||||| |||||||||||||||||  || ||||||||| || | ||||||| || ||||||    
T  30718350 acactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaatacaatccacacaaaatgat-ggacatatatcgatttc 30718448  T
Q  138 atccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    ||||||||||||||| ||| ||||||||| | || |||| |||||||||    
T  30718449 atccaataaaagagtgagtactagagagaatgtttaaaattgagtgttg 30718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 37652240 - 37652420
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||| ||| ||||  |||| | |||||| ||||||| ||| ||||| | | | |||||||||||||||||  ||||||| ||| |||||||||  ||    
T  37652240 gagtaatactaccaaccatctcatttgaacattctctcttatattcacttttttattggtttaaatcattgtgaatctacacgttggaaattgaacatac 37652339  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctag 190  Q
    |||||| ||| | |||||||||||||||||| ||||||| ||||||||||| | | ||| |||||| ||||||||||||||    
T  37652340 acaaaggggtggaacatacattgatttcatctaataaaaaagtaagtgctaaaaaaagtgttgaaatgtgagtgttgctag 37652420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 7919311 - 7919447
Alignment:
Q  56 actctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaag 155  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||  |||||||  |||| || | ||||||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacat--attgattgtatcccatgagagagtaag 7919408  T
Q  156 tgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |  |||||  | | || ||||||||||||||||||||||    
T  7919409 tattagaggaaatgttcaaaagtgagtgttgctagcatt 7919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 2122972 - 2122790
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||| || |||||| | |||||  |||||||||||| | || |||||||||| |||    |||||| |  |||| |||  || ||||||||    
T  2122972 ctagcaacactcttttttgaacattttctctggtactcactctcttattgatttaaatcatagtgaacttacactctagaaatagaatgcatacaaagtg 2122873  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||   ||||||||||||||||||| || ||||||| | || |||||| |||||||||||||||||||||||||||| ||||||    
T  2122872 gtgatacatacattgatttcatcctatgaaagagtgattgatagagaaagtattgaaaagtgagtgttgctagcatacctcgt 2122790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 2476659 - 2476533
Alignment:
Q  70 ttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagta 169  Q
    |||||||||| |  ||||||| |||||||||||||   ||||||||| || |||||||||||||||| ||| |||||||||||||||||||  |||| |     
T  2476659 ttaaatcattataagtctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgcta--gagaatg 2476562  T
Q  170 ttgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||||  |||||||||||    
T  2476561 ttgaaaagtgagtgttagtagcattcctc 2476533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 33678138 - 33678298
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||| |||||||||| ||||| | | | |||||||||| |||||| |||||||| ||  |||| |||||||| ||  ||||| || |||||||||||||    
T  33678138 aacacactctctaatattcacttttttattggtttaaattattgtgagtctacacatttgaaatagaacccacgcat-gtggttgggcatacattgattt 33678236  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||| ||||| |||||| || | ||||| || ||||||||||||||||||||||||||    
T  33678237 cattcaattaaagaataagtgttataaagagtgttcaaaagtgagtgttgctagcattcctc 33678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 1110375 - 1110195
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtg 117  Q
    |||||||||||| || ||| |||||| ||||| | ||||||| | | ||| | |||||| ||| || | || |||||| |||| ||||||||| ||||||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtg 1110276  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || ||||||||||||||||||  |||||||||||| |||| |||||||| |  |  |||| ||||||||||||||||||||    
T  1110275 gtgggacatacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctc 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 4602890 - 4603046
Alignment:
Q  37 aacactctctctaatactcactctctcagt-ggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatt 135  Q
    |||||||||||||||| |||||||||  |  ||||||||||||| | ||||| |||||| ||||||||||  | |||||||| | | ||||| |||||||    
T  4602890 aacactctctctaatagtcactctctttggcggtttaaatcattataggtctgcactttaaaaattgaac--aaacaaagtgatggaacatatattgatt 4602987  T
Q  136 tcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||||||||| ||| | | || |||  |||||||||||||||||||| ||||    
T  4602988 tcatccaataaaagagtgagtaccaaagggagcgttgaaaagtgagtgttgctaacatt 4603046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 37228678 - 37228499
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaag 115  Q
    |||| |||||||||||| ||| |||||| ||||  ||||||| | | | ||| | |||||| ||| || | | |||||||||||  ||||||||| ||||    
T  37228678 gctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgtaggacctgcactttgaaaacggaacccacataaag 37228579  T
Q  116 tggtaggacatacattgattt-catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||| ||||||||||| |||| || ||||||||||||| |||||||||||||||  | ||||| ||||||||||||||||    
T  37228578 tggtgggacatacattaattttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 43414538 - 43414394
Alignment:
Q  11 agtaatgctagcaacactctcttat-gaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||| |||||||||||| | |||||||| ||  ||||||||| ||||   |||||||||||||||||| |||| ||| ||||||| | ||  ||    
T  43414538 agtaatgctatcaacactctctttttgaacactcact--aatactcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttac 43414441  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagt 156  Q
     |||| |||||| |||||||||||||||||||||||||| |||||||    
T  43414440 gcaaaatggtagaacatacattgatttcatccaataaaaaagtaagt 43414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25238278 - 25238411
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca-aa 114  Q
    ||||| |||||||||||| | |||||| ||||||  ||||||| | | | |||||||||||||||||| |||||||||||||||| ||||||||| | ||    
T  25238278 tgctaacaacactctcttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaa 25238377  T
Q  115 gtggtaggacatacattgatttcatccaataaaa 148  Q
    ||| |  ||||||||||||||| ||| |||||||    
T  25238378 gtgatgagacatacattgattttatctaataaaa 25238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 24497375 - 24497189
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||| ||||| |||||||||||  | ||||||||||  |||||||||||||  | | |||||||||| | | ||||||||||||||||||  || ||||    
T  24497375 gagtagtgctaacaacactctctcttaaacactctct--aatactcactctcctattagtttaaatcactcttggtctacactttgaaaataaaatccac 24497278  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| || | | |||||||||  ||||||||||||||| ||  | || || |||||||  | |||||||||||||| |||| ||||||    
T  24497277 acaaaatgatggaacatacattagtttcatccaataaaaaagcgactgttaaagagagtggtcaaaagtgagtgttgttagccttcctc 24497189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 28898103 - 28898034
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| | ||||| |||||||||||||||||    
T  28898103 tacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattc 28898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 24895272 - 24895404
Alignment:
Q  21 gcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtggt 119  Q
    ||||| ||||||| || | ||||||||||| ||||||||| ||| ||| |||||||| |||||||| ||||||||| |||| |||| |||| ||| ||||    
T  24895272 gcaactctctcttttggatactctctctaacactcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggt 24895371  T
Q  120 aggacatacattgatttcatccaataaaagagt 152  Q
     | | |||||||||||| ||||| |||||||||    
T  24895372 ggaatatacattgattttatccattaaaagagt 24895404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 31395516 - 31395628
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||| || |||| ||| ||||| |||||||  |||||||||||||||||| |||||||| |||| ||||||| |||||||  | ||||| |||||||    
T  31395516 ctacactatggaaatggaatccacataaagtggagggacatacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgtt 31395615  T
Q  186 gctagcattcctc 198  Q
    |||| ||||||||    
T  31395616 gctaacattcctc 31395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 32701599 - 32701467
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||||| ||| | ||||| || ||||||||||  ||| |||||||| ||| |||||||||||| ||||||||||||||||  ||||| | |     
T  32701599 tggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagtagttgctaaaaaa 32701500  T
Q  166 agtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| ||||||| ||| || | ||||||||||||    
T  32701499 agtgttgaaaaatgaatgatactagcattcctc 32701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 38104434 - 38104295
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||||| |||||||||| ||||||| |  || |||||||||| ||||||||||||| ||  |||| ||| |||||||| |||||||||  ||| ||||||    
T  38104434 agagtagtgctagcaaccctctcttttagac-ctctctctaacactcactctctcattgaattaattcaatgtgggtcatacactttgggaatggaaccc 38104336  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    | | |||||||| | |||||||||||||| |||||||||||    
T  38104335 aaataaagtggtggaacatacattgattttatccaataaaa 38104295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 472158 - 472264
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||| ||| |||| | |||| ||| |||||||| |||||||| |||||| | |||||||||||||||||| | || | |||||||||||||| |||    
T  472158 gagtaatgttagaaacaatttcttttgagcactctctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcac 472257  T
Q  110 acaaagt 116  Q
    |||||||    
T  472258 acaaagt 472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 1107121 - 1107039
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||  | ||||| ||||||||||| ||||    
T  1107121 aaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctaacatt 1107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 4552843 - 4552925
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaat 100  Q
    |||||||||||| ||| |||||| | | ||| ||||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  4552843 ctagcaacactcacttttgaacattttttctgatactcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 19193501 - 19193683
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| | ||||||||||| || ||||||| ||| | | ||||||||||| |||||||| | |||||| |||| |    |||  |    
T  19193501 aatgctagcaacactctcttttcaacactctctccaacactcactttctaattagtttaaatcatggtgggtctcatactttggaaataggtttcactta 19193600  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||| || ||||||||| ||| ||||||||| ||| | |||| |  ||||||| |||||||| ||||||  |||||||||    
T  19193601 aagtggtgggtcatacattggttttatccaataagagaatgagtgttcaagagagtgttgaaaagagagtgtctctagcattc 19193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 19953582 - 19953440
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccc 107  Q
    ||||||||||||||||||||||||| | |||| | |||| |||||||||| | | | ||| ||||||||| ||| |||| |||||||| |||| |   ||    
T  19953582 agagtaatgctagcaacactctctttttaacattttctccaatactcacttttttattggattaaatcatagtgagtctcacactttggaaatgggttcc 19953483  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    ||  |||||||| || ||||||||| |||||||||||||||||    
T  19953482 acttaaagtggtgggtcatacattggtttcatccaataaaaga 19953440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 27494480 - 27494634
Alignment:
Q  44 tctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaa 143  Q
    ||||||||||||||||| | | || |||||||||||| |||||||  ||||||||| |||||| | | ||| |||| | ||| |||||||||||||||||    
T  27494480 tctctaatactcactcttttattgatttaaatcattgcgggtctatgctttgaaaagtgaacctatataaattggtggaacaaacattgatttcatccaa 27494579  T
Q  144 taaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| | ||| | ||| | | ||| ||||||| | | ||||| |||||||||||    
T  27494580 taaaaaaataaatactaaaaatagtgttgaaaaataaatgttgttagcattcctc 27494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 4964739 - 4964671
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||    
T  4964739 tacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 37719903 - 37719831
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||||||||||||||| ||||||||| |||||  | ||||| || |||||||||||||||||    
T  37719903 tacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctc 37719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 41805873 - 41805959
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||| || ||| ||| |  ||||  ||||||||||||||||||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctc 41805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 27968980 - 27968919
Alignment:
Q  133 atttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||    
T  27968980 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 28091607 - 28091668
Alignment:
Q  133 atttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||    
T  28091607 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 28101839 - 28101900
Alignment:
Q  133 atttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||    
T  28101839 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 41546082 - 41546210
Alignment:
Q  70 ttaaatcattgtgggt-ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||| ||||||| ||||  ||||||||| |||| |||  |||||||  ||||||| ||||||| |||||||||| ||||| | || | ||||||||    
T  41546082 ttaaatcaatgtgggttctacgttttgaaaatggaactcacgtaaagtggcgggacatatattgatt-catccaataagagagtgaatgtttgagagagt 41546180  T
Q  169 attgaaaagtgagtgttgctagcattcctc 198  Q
     |||||||| ||||| ||||||||||||||    
T  41546181 gttgaaaagagagtgatgctagcattcctc 41546210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 45270607 - 45270735
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||||| || |||||||| ||||| |||  |||||||| | ||   ||||||||| |||| ||||||||||| ||| |||| ||||||     
T  45270607 tggtttaaatcattgtgagtttacactttcaaaatcgaattcacacaaaatagtgatacatacattaattttatccaataaaaaagt-agtgttagagaa 45270705  T
Q  166 agtattgaaaagtgagtgttgctagcattc 195  Q
    | | ||||||||||| ||||| ||||||||    
T  45270706 aatgttgaaaagtgaatgttgatagcattc 45270735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 42183003 - 42183075
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||||| |||||  |||||||| || ||||| ||||||| ||||||||||||    
T  42183003 tacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattcctc 42183075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 14489539 - 14489626
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattg 102  Q
    |||||||||| |||||||| |||| | | ||||||||||||| ||| | | |||||||||| ||||||| |||||||||| |||||||    
T  14489539 atgctagcaagactctcttttgaaaattttctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaattg 14489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 11729715 - 11729777
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgcta 189  Q
    ||||||||||||| |||||||||| ||| || |||| ||||| ||||||||||||||||||||    
T  11729715 acattgatttcattcaataaaagaataaatgttagaaagagtgttgaaaagtgagtgttgcta 11729777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 25730432 - 25730602
Alignment:
Q  8 gagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccc 107  Q
    ||||||| |||||||||||  ||||| | |||| | | | ||||| ||||||| | | |||||||||||| |||| || ||||| || ||||| ||||||    
T  25730432 gagagtagtgctagcaacatgctcttttaaacattttttttaatattcactcttttattggtttaaatcactgtgagtttacacgttaaaaatagaaccc 25730531  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagt 178  Q
    ||| ||  ||||  |||||||||  ||| |||||||||||| ||| |||| |||| ||||| || ||||||    
T  25730532 acataatatggtgagacatacatgtattccatccaataaaaaagtgagtgttagaaagagtgttcaaaagt 25730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 43400320 - 43400146
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccc 107  Q
    ||||||||||||||||||||||||| | |||||||||   || ||||| | | | | ||||||||||||  |||||| | |||| |||| ||| |   ||    
T  43400320 agagtaatgctagcaacactctcttttcaacactctcctaaacactcattttattattggtttaaatcaaggtgggtttcacacattgataataggttcc 43400221  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagt 182  Q
    ||  |||||||| ||||||||| |  ||||||||||||| | ||| |||| |||||||||| |||||||| ||||    
T  43400220 acttaaagtggtgggacatacactagtttcatccaataagaaagtgagtgttagagagagtgttgaaaagagagt 43400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 10339857 - 10339767
Alignment:
Q  104 acccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    ||||||| |||||||| |||||| |||||||||   ||||||||| ||| ||||||||||||||| || ||||  || |||||||||||||||    
T  10339857 acccacataaagtggtgggacattcattgattttccccaataaaatagtgagtgctagagagagtgttcaaaa--gattgttgctagcattcc 10339767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 20951673 - 20951603
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||| |||||||||||||| |   | ||||| ||||||||||||||||||||    
T  20951673 tacattgatttcacccaataaaagaataagtgctagagagtgc--tcaaaagagagtgttgctagcattcctc 20951603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 30849412 - 30849284
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtgg 118  Q
    |||||||||||| || |||  ||||| | |||||| |||| ||| | || ||||||||||||||| | ||  |||| ||||| ||||||| ||||| |||    
T  30849412 tagcaacactcttttttgat-actctttttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattgg 30849314  T
Q  119 taggacatacattgatttcatccaataaaa 148  Q
    | |||| ||||||||||||||| |||||||    
T  30849313 tgggacgtacattgatttcatctaataaaa 30849284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 31494393 - 31494211
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| | |||||||||   || |||||||   | | ||| ||||||||  |||||||| |||| ||| |||| |   ||    
T  31494393 agagtagtgctagcaacactctcttttcaacactctcctaaacactcacttcattattggcttaaatcaaggtgggtctcacacattggaaatgggttcc 31494294  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    ||  ||||| || |||||||||||  ||||||||||||| ||||| |||| |  ||||||| |||||||| ||||||||||||||    
T  31494293 acttaaagtagtgggacatacattattttcatccaataagagagtgagtgtt--agagagtgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 146
Target Start/End: Complemental strand, 44674686 - 44674593
Alignment:
Q  54 tcactctctcagtggtttaaatcattgtgggtctac-actttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataa 146  Q
    ||||||||| | ||| |||||||| || |||||| | ||||||||||| ||  ||||| ||||||||| ||| |||||||||||||||||||||    
T  44674686 tcactctcttattggattaaatcaatgcgggtctcctactttgaaaatggattccacataaagtggtaagacctacattgatttcatccaataa 44674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 15509028 - 15509100
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||| |||||||||||| || |||||||  | ||||| ||||||||||| ||||||||    
T  15509028 tacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgctaacattcctc 15509100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 19427320 - 19427425
Alignment:
Q  88 acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgc 187  Q
    ||||||||||||| || |||||| |||||||| |     |||||||||||||||||| | ||||| ||||||  ||||||| || ||||| |||||||||    
T  19427320 acactttgaaaatggatcccacataaagtggtggagtccacattgatttcatccaatgatagagtgagtgct--agagagtgttaaaaagagagtgttgc 19427417  T
Q  188 tagcattc 195  Q
    ||||||||    
T  19427418 tagcattc 19427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 25666700 - 25666764
Alignment:
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    |||||||||||||||||||| |||||||||| | || | |||||||| ||||||| |||||||||    
T  25666700 gacatacattgatttcatccgataaaagagtgaatgtttgagagagtgttgaaaaatgagtgttg 25666764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 37398880 - 37398808
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| ||||||||||||||||| |||||||| |||||||| |  | ||||  ||||||||||||||||||||    
T  37398880 tacatggatttcatccaataaaaaagtaagtgttagagagaatgctcaaaaaagagtgttgctagcattcctc 37398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 42579651 - 42579810
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccca 108  Q
    ||||| ||| ||||||||| |||| | |||||||| ||||| ||||||||||| | ||  |||||||| | || ||  |||  |||||||||  ||||||    
T  42579651 gagtagtgccagcaacactttcttttaaacactctttctaaaactcactctctaattgacttaaatcaatatgagttatacgttttgaaaatgaaaccca 42579750  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |  |||||| |  || ||| |||||||||||||||||||||||| |||| | ||||||||    
T  42579751 cgtaaagtgatgagatatatattgatttcatccaataaaagagtgagtgtttgagagagt 42579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 8009622 - 8009521
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||| | ||||| ||| ||||| ||||||||  ||||||  |||||||||||||| |||| ||| |||| |||| ||||| || ||||| |||||||    
T  8009622 ctacactctaaaaatggaaaccacataaagtggtgagacatatgttgatttcatccaacaaaaaagtgagtgttagaaagagtgttcaaaagagagtgtt 8009523  T
Q  186 gc 187  Q
    ||    
T  8009522 gc 8009521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 6315845 - 6315705
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| ||||||| |||||||||||| ||| |||||| | ||||| ||||||| | | |||   |||| | ||| || | ||||||||| |||| |||||     
T  6315845 agaggaatgctaacaacactctcttttgagcactctttttaatattcactcttttattggaaaaaattaatgtaggacctacactttggaaatggaacct 6315746  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    | | |||||||| | |||||||||||||||||||| |||||    
T  6315745 atataaagtggtggaacatacattgatttcatccagtaaaa 6315705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 11775866 - 11775939
Alignment:
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| ||||||||| ||||||||||| | |||||| |||||||||| |  ||||  ||||||||||||||||||||    
T  11775866 acattcattgattttatccaataaaacaataagtgttagagagagtgtataaaa--gagtgttgctagcattcctc 11775939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 29795890 - 29795802
Alignment:
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||   ||||||||||||||||| | |||||||| | |||| || ||| ||| | ||||||| |||||||||| ||||||||    
T  29795890 acaaagtggtgatacatacattgatttcattcgataaaagaatgagtgataaagaaagtgtagaaaagtaagtgttgctatcattcctc 29795802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 37228613 - 37228685
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||| ||| ||||||||| |||||  | ||||| |||||||| |||| ||||||    
T  37228613 tacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttggtagccttcctc 37228685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 44274352 - 44274419
Alignment:
Q  131 tgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| | ||||||| ||||| |||| |||||||| |||| ||||| |||||||| |||||||||||    
T  44274352 tgatttaaaccaataacagagtgagtgttagagagaatatttaaaagagagtgttgttagcattcctc 44274419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 6420456 - 6420526
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct 87  Q
    ||||||||||||||||| | ||||||||||| |  ||||||| ||| | ||| ||||||||| ||||||||    
T  6420456 gctagcaacactctcttttcaacactctctccaccactcactttcttattggcttaaatcatggtgggtct 6420526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 15508915 - 15508961
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||| ||||||||||||||| |||||||||| ||||| |||||||||    
T  15508915 aatgttagcaacactctcttttgaacactctttctaacactcactct 15508961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 37228499 - 37228545
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactct 37228545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 42182890 - 42182936
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||    
T  42182890 aatgctagcaacactctcttttgagcactctctctagcactcactct 42182936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 4877390 - 4877280
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtg-tt 185  Q
    ||||||||  |||| |||| ||||||||||| |  ||||| |||  ||| |||| ||||||||||| ||||||||| |||  ||| ||||||||||| ||    
T  4877390 tacactttagaaatagaactcacacaaagtgatgagacatgcatgaattccatcaaataaaagagtgagtgctagaaaga--atttaaaagtgagtgttt 4877293  T
Q  186 gctagcattcctc 198  Q
    | |||||||||||    
T  4877292 gatagcattcctc 4877280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 19193534 - 19193497
Alignment:
Q  161 gagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  19193534 gagagagtgttgaaaagagagtgttgctagcattcctc 19193497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 23463936 - 23464009
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||  |||||| | ||| | || | ||||||||||| ||||| || |||||||||||||||||    
T  23463936 atacattgatttcactcaataagatagtgaatgtttgagagagtattaaaaagagaatgttgctagcattcctc 23464009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 30706456 - 30706407
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcact 58  Q
    |||||| |||||||||||||||||| | ||||||||||| || |||||||    
T  30706456 agagtagtgctagcaacactctcttttcaacactctctcaaacactcact 30706407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 14715691 - 14715627
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagc 191  Q
    ||||| |||||||||||| | ||||| | ||||||||||| |||| |||||  ||||||||||||    
T  14715691 acattaatttcatccaatgagagagtgaatgctagagagaatattaaaaagaaagtgttgctagc 14715627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 21215394 - 21215458
Alignment:
Q  88 acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||||||| || |||||| ||||| |||||||  ||||||||||   |||||||||||||    
T  21215394 acactttgaaaatggatcccacataaagttgtaggactcacattgattttggccaataaaagagt 21215458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 8109141 - 8108957
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||  ||    
T  8109141 gagtaatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaac 8109042  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||| | || |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  8109041 acaaattagtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 43771312 - 43771126
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  43771312 agagtaatgctagcaacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccca 43771213  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||  |||||||||| || ||||||||||||||||| |||||    
T  43771212 cacagagtggtgggacatacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattc 43771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 39471342 - 39471154
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| |||||||||||| | |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||    
T  39471342 gagtaatgctaacaacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaac 39471243  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| |||||||||||||||||||| |||||||||||  ||| || |||||||||| ||||||||||||||||||||||||||    
T  39471242 acaaagtggtgggacatacattgatttcatctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttgctagcattcctc 39471154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 34129395 - 34129583
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||| ||||||||||||| |||||||  ||||||||||||||||| | | ||||||||| ||||||| ||| |||||||||||||||||| |||    
T  34129395 gagtaatgctggcaacactctcttctgaacacaatctctaatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacac 34129494  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||| |||||||||| |||||||||| |||||| ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  34129495 acaaagtggtgggatatacattgatctcatccaatagaagagtgagtgctagagagagttttgaaaagtgaatgttgctaccattcctc 34129583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 50164580 - 50164392
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||| |||||| |||| ||||||||||||||||| |||||| ||| | ||||||||||||||||| |||||||||||||||||||||||| |    
T  50164580 gagtaatgctagtaacactatcttttgaacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaaccccc 50164481  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||| ||| |||||||||||| |||||||||| |||| ||||||||||||||| || ||||||||||||| |||| |||||||    
T  50164480 acaaaatggtgggagatacattgattttatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgttactagtattcctc 50164392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 24834759 - 24834579
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24834759 aatgctagcaacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaa 24834660  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    | |||| ||||||||||||||| ||||||||||||  || || | |||||||||| |  ||||||||||||||||||||||    
T  24834659 aatggtgggacatacattgattccatccaataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttgctagcatt 24834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 722330 - 722168
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    ||||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |    
T  722330 caacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgg 722231  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||  |||||||    
T  722230 gacatactttgatttcatccaataaaaaagtgagtgctagagagagtgttgaaagatgagtgt 722168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 26361302 - 26361483
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| || | |||||||||||||| ||||||||||||||||| ||||||||||    
T  26361302 agagtaatgctagcaacactctcttttgaacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaaccca 26361401  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| |||| || |||||||||| ||||||||||||||||||        |  ||||| |||||||||||||||||||||||||||||    
T  26361402 cacaaaatggtgggtcatacattgacttcatccaataaaagagt--------gttagagtgttgaaaagtgagtgttgctagcattcctc 26361483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 20454716 - 20454545
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagt 116  Q
    |||||||||| |||||| |||||||||||||||| ||||||||| | | || ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  20454716 gctagcaacattctcttttgaacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagt 20454617  T
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctag 190  Q
    |   |||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  20454616 g--tggacatacattgattttatctaataaaagagtgagtgctagagagagtgttgaaaagtaagtgttgctag 20454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 754586 - 754749
Alignment:
Q  21 gcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggta 120  Q
    |||||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||     
T  754586 gcaacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtg 754685  T
Q  121 ggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    |||||||| |||| |||||||||||||| ||| |||| |||||| ||| ||||||||| |||||    
T  754686 ggacatactttgagttcatccaataaaaaagtgagtgttagagaaagtgttgaaaagtaagtgt 754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 47009374 - 47009187
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||||| ||| | |||||||||||||||||  ||||||||||||||||||||| |||    
T  47009374 gagtaacgctagcaacattctcttttgaacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcac 47009275  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    |||||| |||  |||| ||||| |||| ||||||||||||||| ||||||||| ||||| ||||||| ||||| ||| || |||||||    
T  47009274 acaaagcggtgagacaaacattaattttatccaataaaagagtgagtgctagaaagagtgttgaaaaatgagttttgttaacattcct 47009187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 49077434 - 49077246
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||| ||||||||||| | |||||  |||  | ||||||  |||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  49077434 gagtaatgctagtaacactctcttttaaacaccttcttgagtactcaaactcttattggtttaaatcattgtgggtctacactttaaaaattgaacccac 49077335  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||||||| ||| |||| ||| ||||||||| | ||||||| ||||| | ||||||| |||||||||||||||||||||    
T  49077334 acaaagtggtgggacatatattaattttatctaataaaagaatgagtgctaaagagaatgttgaaaactgagtgttgctagcattcctc 49077246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 49242355 - 49242167
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| |||||||||||| | |||||||||| | ||||||| ||||| | |||||||||||||||||  ||||||| |||||||||||||||||    
T  49242355 gagtaatgctaacaacactctcttttaaacactctctatgatactcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccac 49242256  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| | ||||||| |||||||||||||||| ||| ||| | || |||| ||||| || ||||||||||||| ||| || |||||    
T  49242255 acaaagtgatgggacatatattgatttcatccaattaaaaagtgactgttagatagagtgttcaaaagtgagtgttcctaacactcctc 49242167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 40991593 - 40991772
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtgg 118  Q
    |||||||||| | || |||||||||||||| ||||||||||| | | ||||||||||||||||||||||||||||   |||| |  || | |||| | ||    
T  40991593 tagcaacacttttttttgaacactctctctgatactcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatgggg 40991692  T
Q  119 taggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | ||||||| |||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  40991693 tgggacatatattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctc 40991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 33653511 - 33653672
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||| || | | ||||||||||||| || |||||| |||| ||||||||||||||||    
T  33653511 aacactctctctaatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgattt 33653610  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| |||||| |||| | |  |||||||||| ||||||| |||||||||||||||||||||    
T  33653611 catcaaataaatgagtgattaatagagagagtgttgaaaactgagtgttgctagcattcctc 33653672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 24938409 - 24938557
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||| | |||| | |||||| ||||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||| |||    
T  24938409 agagtaatgctagcaacattatcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatcca 24938508  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
     ||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  24938509 aacaaaatggtgggacatacattgattacatccaataaaagagtgagtg 24938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 50571985 - 50571861
Alignment:
Q  74 atcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattga 173  Q
    ||||||| ||||||||||||||||||||||| ||||| ||| || | || ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgttga 50571886  T
Q  174 aaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||| ||||||||    
T  50571885 aaagtgactgttgctaacattcctc 50571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 22542562 - 22542423
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    ||||||| ||||||| |||| |||||||||| | ||||||||||||||| | | ||||||||||||||||| |||  |||||||||||||||||||||||    
T  22542562 aatgctaacaacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaa 22542463  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagta 153  Q
    |||||| | |||||| |||||||||| |||||||||||||    
T  22542462 agtggtggaacatactttgatttcattcaataaaagagta 22542423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 20225383 - 20225522
Alignment:
Q  57 ctctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagt 156  Q
    |||||| | ||||||||||||||||| |||||||||||| |||| ||||||||| |||||||| |||||| ||| |||| |||||||||||||||| |||    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtgagt 20225482  T
Q  157 gctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||  ||||||| || ||||||||||||||||||||||||||    
T  20225483 gct--agagagtgttcaaaagtgagtgttgctagcattcctc 20225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 46287570 - 46287441
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||||| ||| |||||||||||||||||  |||||||||| ||| |||||| ||| |||||||||||||||| ||||||||||||| |     
T  46287570 tggtttaaatcattgtgagtcaacactttgaaaattgaatacacacaaagtagtaagacatatattaatttcatccaataaaatagtaagtgctagaaaa 46287471  T
Q  166 agtattgaaaagtgagtgttgctagcattc 195  Q
    | |||||||||||||||||| |||||||||    
T  46287470 aatattgaaaagtgagtgttactagcattc 46287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 19447318 - 19447174
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggt-ctacactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||||||||| | ||  |||||||||||| ||| || || ||||||||| ||||||    
T  19447318 agagtagtgctagcaacactctcttttgaacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaaccc 19447219  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||| |||||||| |||||||||||| ||||| ||||||| |||||    
T  19447218 acataaagtggtgggacatacattggtttcacccaataagagagt 19447174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 45310943 - 45311078
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||||| |||||| |||||   |||||||||||| ||||||| | || |||||||||||||  |||| |||||||||||||||| || |    
T  45310943 gagtaatgctagcaacattctcttttgaactgactctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatcccc 45311042  T
Q  110 acaaagtggtaggacatacattgatttcatccaata 145  Q
    |||||||||| ||||||| |||||||||||||||||    
T  45311043 acaaagtggtgggacatatattgatttcatccaata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 48339340 - 48339515
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||  || ||| |||| ||||||| |  |||||| | | ||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  48339340 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaa 48339439  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctag 190  Q
    ||||| | ||||||||||||||  |||||||| ||||| |||| || |||||||  | || |||||||||||||||    
T  48339440 gtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagtgctcaatagtgagtgttgctag 48339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 13070120 - 13069938
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| |||||| | ||||||| ||||||||| | | ||  | |||||| ||| || | |||||||||||||| ||||||||| |||    
T  13070120 tgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaa 13070021  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| | |||||||||||||||| ||||||||||||| |||||||||||| ||  | ||||| |||| || ||||||||||||    
T  13070020 gtggtggaacatacattgatttca-ccaataaaagagtgagtgctagagagtgtgctcaaaagagagtattcctagcattcctc 13069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 25719123 - 25719266
Alignment:
Q  26 actctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtggtaggac 124  Q
    |||||||| |||||| | ||||||||||||||||||| | ||| ||||||||||||||||| |||| |||| ||||  |||||||| |||||||| ||||    
T  25719123 actctcttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggac 25719222  T
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||||||||| ||||||| ||||| |||| | ||||||||    
T  25719223 atacattgatttcaaccaataagagagtgagtgtttgagagagt 25719266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 29699645 - 29699499
Alignment:
Q  38 acactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttc 137  Q
    ||||||| ||||||| ||||||||| | || ||||||||||||| || ||| ||||||||| | ||||| |||||||||||| ||||||  |||||||||    
T  29699645 acactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttgaaa-tagaaccaacacaaagtggtgggacatgtattgatttc 29699547  T
Q  138 atccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||||||||||| ||||||||| || ||||| ||||||| |||||    
T  29699546 atccaataaaagagtgagtgctagaaagggtattcaaaagtgggtgtt 29699499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 39016850 - 39016664
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggt-ctacactttgaaaattgaaccc 107  Q
    |||| |||| ||||||||||||||| |||||||||||||||  ||| ||||| | | | | | |||||| ||| | | |||||||||| |||| ||||||    
T  39016850 agagaaatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgtagatactacactttggaaatggaaccc 39016751  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||  ||| |||| |||||||||||||||||||||||||||| |||||||| || ||||||| || ||||| || |||||||||||||    
T  39016750 acgtaaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgctagcatt 39016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 10169648 - 10169822
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||| || | ||||  || | ||||| ||||||||| | |||||||||| ||||||| ||||   |||||||||||||| |||||||||||    
T  10169648 ctagcaacactctttttttaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtg 10169747  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||| |||||||||||||||||| ||||| | |  |  ||||||| ||||||||||| ||||| |||||||    
T  10169748 gtaggacatatattgatttcatccaataatagagtgaatatt--agagagtgttgaaaagtgaatgttgttagcatt 10169822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 31250877 - 31251015
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaa-tactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||||||| || | || ||||||||||| || | ||||| | | || |||||||||||||||||||||| ||||||||||||||       
T  31250877 gagtaatgctagcaacactctattttaaatactctctctaaatatttactcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtc 31250976  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    || ||| |||| |||||||||||||||||||||||||||    
T  31250977 cataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 42862414 - 42862604
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| ||| |||| | ||||  ||||||||| | | ||| | |||||| | |  || | ||||||||||||| ||||||    
T  42862414 agaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgtttcacactttgaaaatggaaccc 42862513  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| |||||||||||||||||| ||||||||| ||| ||||||||||| |||  | ||||| |||||||  |||||||||||    
T  42862514 acataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttattagcattcctc 42862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 38537507 - 38537654
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacact---ttgaaaattgaac 105  Q
    ||||||||| |||||||||| |||| |||||||||||||||||| ||| ||| | | || ||||||||||| ||  ||||||||   |||||||||||||    
T  38537507 agagtaatgttagcaacactttcttttgaacactctctctaataatcattcttttattgatttaaatcattatgaatctacactttgttgaaaattgaac 38537606  T
Q  106 ccacacaaagtggtaggacatacattgatttcatccaataaaagagta 153  Q
     || ||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  38537607 tcatacaaagtagtaagacatacattgatttcatcaaataaaatagta 38537654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 50481584 - 50481708
Alignment:
Q  54 tcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagta 153  Q
    ||||||||| | |||||||||| |||||| ||||||||||||||||| ||| ||| ||||||||||  ||||||| |||||||||||||||||||||||     
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T
Q  154 agtgctagagagagtattgaaaagt 178  Q
    ||||  | | ||||| |||||||||    
T  50481684 agtgagaaaaagagtgttgaaaagt 50481708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 46242000 - 46242113
Alignment:
Q  71 taaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtat 170  Q
    |||||||||||||||||| | ||||||||||||||| ||||||| |||| ||||||||| ||||||||||| ||||||| || ||| ||  ||||||| |    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtgagttct--agagagtgt 46242097  T
Q  171 tgaaaagtgagtgttg 186  Q
    | ||||||||||||||    
T  46242098 taaaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 13520078 - 13519944
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattga--tttcatccaataaaagagtaagtgctagag 163  Q
    |||||||||||||||||||| ||||| ||| |||  |||||| ||||||||||| | |||||||||||  ||| ||||||| ||| ||| ||||||| ||    
T  13520078 tggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtgctacag 13519979  T
Q  164 agagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||| ||||| | |||||||||||||    
T  13519978 agagtatttaaaaatgagtatcgctagcattcctc 13519944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 30866930 - 30867081
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaattgaacccacaca 112  Q
    |||||||||||| ||||||| | |||||||||||||  ||||| | | | | | | | ||| || |||||| |||||||||||||||| ||||||||| |    
T  30866930 aatgctagcaacgctctcttttaaacactctctctagcactcatttttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacata 30867029  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagaga 164  Q
    ||||||| ||||||||||| |||| ||||||||||| ||| |||||||||||    
T  30867030 aagtggtgggacatacattaatttaatccaataaaaaagtgagtgctagaga 30867081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 47237812 - 47237923
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||||||||  |||  | | |||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||| || ||||| |||||||    
T  47237812 ctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgtt 47237911  T
Q  186 gctagcattcct 197  Q
    | ||||||||||    
T  47237912 gatagcattcct 47237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 21776848 - 21776998
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||||| |  ||||||||||||| ||||| |||||||  |  |||||||  | |||||| |||| |||| ||||  || ||||| ||||||    
T  21776848 tagcaacactctctttttgacactctctctaacactcattctctcatcgaattaaatcgatatgggtcatacattttggaaataaaatccacataaagtg 21776947  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||||||||||||||| ||||||||||||||| | || ||||||||||    
T  21776948 gtaggacatacattgattttatccaataaaagagtgaatgttagagagagt 21776998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 43124509 - 43124651
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| ||||||| || | |||||||||| | |||||| |||||||| | ||||||||||| |  ||||| |||| |||||||||  | || ||    
T  43124509 gagtaatgctaacaacactttcctttgaacactctttataatacgcactctcttattggtttaaatcttcatgggtatacagtttgaaaataaagcctac 43124608  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||| |||| |||||||||||||||||||||| |||| ||||    
T  43124609 acaaaatggtgggacatacattgatttcatccattaaatgagt 43124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 45081743 - 45081925
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||| ||||||||  || |||| | ||| ||||||||||||||| | | |||||||||| |||||| || ||||||||| |||| | |||||||||||     
T  45081743 tgctatcaacactcctttttgaaaattctttctaatactcactcttttattggtttaaattattgtgagtgtacactttggaaataggacccacacaaaa 45081842  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| |||| |||  ||| |||| ||||||||| ||||||||| | ||| | || ||||| || |||||||| ||||||||    
T  45081843 tggtagaacatgcatgtattccatcaaataaaagaataagtgctaaaaagaatgttcaaaagagaatgttgctaacattcctc 45081925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 33995986 - 33996106
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||| ||||||| || || | ||||||||||||||||||| ||||||||  ||||||||||||||| ||  ||||||||||| | || |||||||    
T  33995986 tggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagagag 33996085  T
Q  166 agtattgaaaagtgagtgttg 186  Q
     || |||||||| ||||||||    
T  33996086 tgtgttgaaaagagagtgttg 33996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 52672006 - 52671862
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtgg 118  Q
    |||||||| | |||| | |||||||||| ||||||||||| ||| | | ||||||||||||| |  | |||||||| ||||||||||  ||| ||| |||    
T  52672006 tagcaacattatcttttaaacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatgg 52671907  T
Q  119 taggacatacattgatttcatccaataaaagagtaagtgctagag 163  Q
    | ||||||||||| |||||||||||||||| ||| ||| ||||||    
T  52671906 tgggacatacatttatttcatccaataaaaaagtgagtactagag 52671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 43958327 - 43958145
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||| ||| |||||||| ||||||||||||||  |||| ||||||| | |||||||||||| | ||  ||| ||  |||||||| | | ||||| |||     
T  43958327 tgctaacaatactctcttttgaacactctctct--tacttactctcttattggtttaaatcactttgattctgcatattgaaaatag-atccacataaaa 43958231  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtt 201  Q
    |||| |||||||||||||||  || |||||||||||| | ||||||||||| | || |||| |||||||||||| |||| ||||||    
T  43958230 tggtgggacatacattgattctattcaataaaagagtgaatgctagagagaatgttaaaaactgagtgttgctaacatttctcgtt 43958145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 2187812 - 2187992
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||| | | | | ||  | ||| || |||||| | |||||||||||||| ||||||||| |    
T  2187812 aatgctagcaacactcgcttttgagcactctctctaacactcatttttttattgtgtgaaaacaatgtgggacctacactttgaaaat-gaacccacata 2187910  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||| |||||| ||||||||||| ||||||||||||  |  ||||||||||||  | ||||| ||||||| ||| ||||    
T  2187911 aagtggtgggacattcattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgttcctaacatt 2187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 5044568 - 5044673
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||||||||| ||| ||| | | ||||||||||| ||||||||||||| ||| |||||||||| |||||||| | ||  |||||| ||||||||||||||    
T  5044568 ctctctaatattcattcttttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatcca 5044667  T
Q  143 ataaaa 148  Q
    ||||||    
T  5044668 ataaaa 5044673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 5545755 - 5545642
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||||| |||||||||||||||||||| ||| | | | | | |||||||| |||||||| |||| ||||||||| || |||||| ||||||    
T  5545755 tagcaacactctcttttgaacactctctctaatacttactttttaatttgcttaaatcaatgtgggtcttacattttgaaaatggagcccacataaagtg 5545656  T
Q  118 gtaggacatacatt 131  Q
    || |||||||||||    
T  5545655 gtgggacatacatt 5545642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 22592402 - 22592301
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    |||| ||||| |||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||||| | || ||||||||| ||||||| || |||    
T  22592402 aaatagaacctacacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgttcaaaagtgagcgttgctatcaatcc 22592303  T
Q  197 tc 198  Q
    ||    
T  22592302 tc 22592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 37451023 - 37451161
Alignment:
Q  25 cactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggac 124  Q
    ||||||||| | |||||  ||||||||||||||||| | | ||||||||||||||| | ||||||||||||||||| |||  | |||||| ||||| ||     
T  37451023 cactctcttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaa--ctcacaaattggtaagat 37451120  T
Q  125 atacattgatttcatccaataaaagagtaagtgctagagag 165  Q
     ||||| ||||  ||||||||||||||| |||| |||||||    
T  37451121 gtacatggattctatccaataaaagagtgagtgttagagag 37451161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 66 - 171
Target Start/End: Original strand, 41153249 - 41153354
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||| ||||||||||||  | ||||||||  |||| ||||| |||||||||||| |||||| |||  ||||||||||||||||||||||||| || ||||    
T  41153249 tggtctaaatcattgtgaatgtacactttagaaatagaacctacacaaagtggtgggacatgcatgaatttcatccaataaaagagtaagtgataaagag 41153348  T
Q  166 agtatt 171  Q
    ||||||    
T  41153349 agtatt 41153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 2088735 - 2088839
Alignment:
Q  85 tctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    ||||||||||| |||| ||| ||||| |||||||| ||||||||||||||||||  |||| ||||||| |||| ||||||||||| | ||||  ||||||    
T  2088735 tctacactttggaaatggaatccacataaagtggtgggacatacattgatttcactcaattaaagagtgagtgttagagagagtactcaaaaaagagtgt 2088834  T
Q  185 tgcta 189  Q
    |||||    
T  2088835 tgcta 2088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 11895222 - 11895134
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctct-ctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaa 98  Q
    ||||||||||||||||||||||| |||||||| | | ||| |||||||||||| | | ||| |||||||||||||||||||||||||||    
T  11895222 agtaatgctagcaacactctcttttgaacacttttttctattactcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 19937180 - 19937341
Alignment:
Q  23 aacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg 122  Q
    ||||||||||| | |||||||||| |||| |||||||| |   |||||| ||||||||| | |||| ||||||||||| |||| |||| | | |||| ||    
T  19937180 aacactctcttttaaacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtggg 19937279  T
Q  123 acatacattgatttcatccaa-taaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||||||  |||||| ||||| | ||| |||||||||||  ||| |||||||||||||    
T  19937280 acatacattgattgtatccaattaaaaaattaaatgctagagaga--atttaaaagtgagtgtt 19937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 16178692 - 16178611
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||||| |||| ||||||||| |||||||| ||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  16178692 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcactcaat-aaagagtgagtgctagagagagt 16178611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 51206221 - 51206079
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagt 116  Q
    |||||||||||||||| ||| |||||||||||  ||||||||| | | ||| | |||||| ||| || | |||| |||||||||  ||| |||| |||||    
T  51206221 ctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagt 51206122  T
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgct 159  Q
    | | |||||||||||||||||||| |||||| |||| ||||||    
T  51206121 gatgggacatacattgatttcatctaataaatgagtgagtgct 51206079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 49682842 - 49682974
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||  ||||| ||||||||||||||||||||  || | ||||||||  || ||||||||||||||||| |||||| ||| | ||||| |||     
T  49682842 tggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttcatccgataaaaaagtgaatgctaaagaa 49682941  T
Q  166 agtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| ||||| |   |||||||||| ||||||||    
T  49682942 agtgttgaataacaagtgttgctaacattcctc 49682974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 52279253 - 52279373
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| |||||||| ||| || | |||||||| ||||||| ||||||||  | || | |||||||||||||||||| ||||||||||||||| |||    
T  52279253 agagtaatggtagcaacattcttttttaaacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaatcca 52279352  T
Q  109 cacaaagtggtaggacataca 129  Q
     | ||||| || | |||||||    
T  52279353 gaaaaagttgtggaacataca 52279373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 35179796 - 35179653
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctac---actttgaaaattgaac 105  Q
    |||||||||||| |||||||||||| ||| |||| ||| ||||| ||||||| | | | || ||||||||||| |||||||   ||||||||| ||||||    
T  35179796 agagtaatgctaacaacactctcttttga-cactatctttaatattcactctattattagtataaatcattgtaggtctactacactttgaaa-ttgaac 35179699  T
Q  106 ccacacaaagtggtaggacatacattgatttcatccaataaaagag 151  Q
    ||||  ||||| ||   ||||||||||||||||||| |||||||||    
T  35179698 ccacgtaaagtagtgaaacatacattgatttcatccgataaaagag 35179653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 51206157 - 51206228
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||||||||||||| ||||||||||||| |||||||||||||||  | ||||| |||||||||||| ||||||    
T  51206157 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagtattcct 51206228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 51904611 - 51904778
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccac 109  Q
    |||| |||||||||||||||||| | |||||||||||||| ||| ||  ||| | ||| ||||||||| |||||||| |||||||| |||| |   ||||    
T  51904611 agtattgctagcaacactctcttttcaacactctctctaacacttacattcttattggcttaaatcatggtgggtctcacactttgtaaataggttccac 51904710  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaag 177  Q
      |||||| | || ||||||||||||||||| ||||| ||| | ||||  | ||||||| ||||||||    
T  51904711 ttaaagtgatgggtcatacattgatttcatctaataagagaatgagtgacaaagagagtgttgaaaag 51904778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 38636461 - 38636375
Alignment:
Q  71 taaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    ||||||||||||| |||||||||| ||||||  ||||||| ||||| ||  ||||||||||||||| ||| ||||||||||| ||||    
T  38636461 taaatcattgtggatctacactttaaaaattagacccacataaagtagtgagacatacattgattttatcaaataaaagagtgagtg 38636375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 49769857 - 49769987
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    |||||||||||||| ||| || |||||||||||  ||| |||| ||| | || ||| |||  |||||||||||||||||||||||| ||| || | |||     
T  49769857 gtttaaatcattgtaggtttatactttgaaaataaaactcacataaaatagtgggatatattttgatttcatccaataaaagagtatgtgttaaaaagaa 49769956  T
Q  168 tattgaaaagtgagtgttgctagcattcctc 198  Q
    | || |||||| | |||||||||||||||||    
T  49769957 tgttcaaaagtaactgttgctagcattcctc 49769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 40812103 - 40812034
Alignment:
Q  129 attgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||||||||||||| ||||||||||||||| || ||||  ||||||||||||||| ||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcatacctc 40812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 46536295 - 46536384
Alignment:
Q  48 taatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttc 137  Q
    ||||| ||||||||| | || ||||||  | ||||||| |||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  46536295 taatattcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgatttc 46536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 50652369 - 50652470
Alignment:
Q  48 taatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||| ||||| ||| | || ||||||| |||||  ||||||| ||||||||||||||| ||||||||||||  || |||||||||||| || |||||||    
T  50652369 taatattcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataaa 50652468  T
Q  148 ag 149  Q
    ||    
T  50652469 ag 50652470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 27654662 - 27654478
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccac 109  Q
    |||| |||||||||||||||||| | ||||||||||| || ||||| | | | | ||||||||||||  |||| | | |||| ||| |||| |   ||||    
T  27654662 agtagtgctagcaacactctcttttcaacactctctcaaacactcaatttattattggtttaaatcaaggtggatttcacacgttggaaatgggttccac 27654563  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
      |||||||| |||||||||||  ||| ||||||||| ||| | |||| |||||||||| |||||||| ||||||  ||||||||    
T  27654562 ttaaagtggtgggacatacattagttttatccaataagagaatgagtgttagagagagtgttgaaaagagagtgtccctagcatt 27654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 39016777 - 39016845
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| | | ||||||||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  39016777 tacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 41278695 - 41278755
Alignment:
Q  92 tttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||||||    
T  41278695 tttgaaaatggaacccacataaagtggtaggacatacattaattttacccaataaaagagt 41278755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 18421826 - 18421962
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||| ||||||||||||||| |||| ||| | | ||||| ||||| | | | ||||||||||||||||   |  | ||||| |||||| ||| |||    
T  18421826 gagtaatgttagcaacactctcttttgaatactttatttaatattcacttttttattggtttaaatcattgtaaatacatactttaaaaattaaacacac 18421925  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    |||  ||||| |||||||||||||||||||| |||||||    
T  18421926 aca--gtggtgggacatacattgatttcatctaataaaa 18421962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 37315742 - 37315564
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    ||||||||||||||||| || ||| |||||||  ||  ||||||||| | | ||| | |||||| ||| |  | ||| ||||||||||  |||  ||| |    
T  37315742 aatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaacttacata 37315643  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||| |||||||||||||||||| ||||   |||||| |||| ||||||||||  | ||||| ||||||||||||||||    
T  37315642 aagtggtgggacatacattgatttcacccaa---aagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 37315564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 42862490 - 42862415
Alignment:
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||||||||| ||||||||||||| ||||||||| | |||  | ||||| ||||||||||||||||||||    
T  42862490 acataaattgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctc 42862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 44832650 - 44832460
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| ||| ||||||||| |  ||||| | | | | ||| | |||||| ||| || | | ||||||| |||| ||| ||    
T  44832650 agaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgtaggacctgcactttggaaatggaatcc 44832551  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| ||| |||| ||||||||||| |||||| ||||||||| ||| |||| |||| ||| |  | ||||| || ||||| |||||||||||    
T  44832550 acataaaatggtgggacatacattaatttcacccaataaaaaagtgagtgatagaaagaatgctcaaaagagaatgttgttagcattcctc 44832460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 48608163 - 48608077
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| ||||||||||| |||| ||||||||||||||| | || || ||| |||| | ||||| |||||||| |||||||||||    
T  48608163 aaagtggtgggacatacattaattttatccaataaaagagtgaatgttaaagaaagtacttaaaagagagtgttgttagcattcctc 48608077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 11127859 - 11127796
Alignment:
Q  89 cactttgaaaatt-gaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||||||| ||||| | |||||||||| ||||||||||||||||||||| ||||||||||    
T  11127859 cactttgaaaattagaaccaatacaaagtggt-ggacatacattgatttcatcccataaaagagt 11127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 44832577 - 44832649
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||| | | |||||| ||||||||  | ||||| ||||||||||||||||||||    
T  44832577 tacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctc 44832649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 1559812 - 1559891
Alignment:
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgcta 189  Q
    ||||| |||| |||||||| |||||| ||| ||||||| |||| ||||||| ||||||| |  |||||||||||||||||    
T  1559812 acaaattggtgggacatacgttgattccattcaataaaggagtgagtgctaaagagagtgtacaaaagtgagtgttgcta 1559891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 4138991 - 4138913
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||||| |||| | |||||||||||| |||| ||| ||| | ||  |||| |||||||||||||||||||||||||||    
T  4138991 tttaaattattgcgagtctacactttggaaatagaatccataaaatatggtgggacatacattgatttcatccaataaa 4138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 37315564 - 37315610
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||    
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactct 37315610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 37315674 - 37315743
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||||||||||| ||||||||||||| |||||||  ||||||  | ||||  |||||||||||||||||    
T  37315674 tacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcattc 37315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 2861024 - 2860924
Alignment:
Q  48 taatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||||||||||  | | ||| |||||  ||||||| |||||||||||||||||||| ||||| |||| | | | | ||||||| ||||||||||| |||    
T  2861024 taatactcactcggtgattggcttaaactattgtggatctacactttgaaaattgaatccacagaaagggatggaaaatacattaatttcatccaacaaa 2860925  T
Q  148 a 148  Q
    |    
T  2860924 a 2860924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 34961828 - 34961699
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||  ||||||||| | |||||||||| |  |||||||||||| | | | |||||||| ||||||  ||||   ||||||||||||||||| ||||    
T  34961828 aatgctaataacactctcgtttgaacactcttt--aatactcactcttttattagtttaaattattgtgactctat--tttgaaaattgaaccca-acaa 34961734  T
Q  114 agtggtaggacatacattgatttcatccaataaaa 148  Q
    ||||||   | |||||||||| |||||||||||||    
T  34961733 agtggtgaaatatacattgatctcatccaataaaa 34961699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 50879559 - 50879471
Alignment:
Q  92 tttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtga 180  Q
    |||| |||| ||||||||| ||| |||| |||||| |||  ||| ||| |||||||||||| ||||||||| ||||| || ||||||||    
T  50879559 tttggaaatagaacccacataaaatggtgggacatgcatgaattccattcaataaaagagtgagtgctagaaagagtgttcaaaagtga 50879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 53871002 - 53871046
Alignment:
Q  154 agtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||    
T  53871002 agtgttagagagagtgttggaaagtgagtgttgctagcattcctc 53871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 28304089 - 28304144
Alignment:
Q  88 acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaa 143  Q
    ||||||||||||| || |||||  |||||||| |||||| ||||||||||||||||    
T  28304089 acactttgaaaatggaccccactaaaagtggtgggacatgcattgatttcatccaa 28304144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 1559909 - 1560047
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||| ||||| ||||||| | || ||||||||||| |||||| | | | ||| | |||||||||||||| || |||||||| | | |||| |||| |||    
T  1559909 gagtagtgctaacaacactttattttgaacactctcactaatattgaatttcttattggtttaaatcattttgagtctacacctaggaaatagaactcac 1560008  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    | ||| | || |||||||  |||||| ||| ||||||||    
T  1560009 aaaaattagtgggacatatgttgattacattcaataaaa 1560047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 16178697 - 16178739
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||||||||||||||||||||||| || | ||||||||||    
T  16178697 tacattgatttcatccaataaaagagtgagagttagagagagt 16178739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 20225350 - 20225388
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctct 48  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  20225350 gagtagtgctagcaacactctcttttgaacactctctct 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 5994863 - 5995052
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccac 109  Q
    |||| ||||||||||| |||||| | ||||||||||| || | ||||| ||| | ||  ||||||||| |||||||| |||| ||| |||| |   ||||    
T  5994863 agtagtgctagcaacagtctcttttcaacactctctccaacattcactttctaattgacttaaatcatggtgggtctcacacattggaaatgggttccac 5994962  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
      ||||||||  | ||||||||  ||| ||||||||| ||| | |||| || ||||||| |||||||| || |||  |||||| ||||||    
T  5994963 ttaaagtggtgagtcatacattagttttatccaataagagaatgagtgttaaagagagtgttgaaaagagaatgtccctagcaatcctcg 5995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 19321873 - 19321947
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc 86  Q
    ||||| |||||||  ||||||||| |||||  ||||||||||||| ||||||| | |||||| |||||||| |||||    
T  19321873 gagtagtgctagcttcactctcttttgaac--tctctctaatacttactctcttattggtttgaatcattgcgggtc 19321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 40812039 - 40812084
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||| || |||||||||||||||  |||||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactct 40812084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 47237800 - 47237767
Alignment:
Q  133 atttcatccaataaaagagtaagtgctagagaga 166  Q
    |||||||||||||||||||| |||||||||||||    
T  47237800 atttcatccaataaaagagtgagtgctagagaga 47237767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 51904657 - 51904616
Alignment:
Q  151 gtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    ||||||| |||||||||| |||||||| ||||||||||||||    
T  51904657 gtaagtgttagagagagtgttgaaaagagagtgttgctagca 51904616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 11895136 - 11895084
Alignment:
Q  146 aaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||  ||||||||||||   |||||||||||||||| ||||||||||||    
T  11895136 aaagagtgggtgctagagagatggttgaaaagtgagtgttactagcattcctc 11895084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 13070054 - 13070126
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |  |||||||||||| |||| |||||| | | || ||||| |||||||||||||| |||||    
T  13070054 tacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagcactcctc 13070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 19933475 - 19933555
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacacttt 94  Q
    |||| |||||||||||| || |||||||||||| ||||||  ||||  | | | ||||||||||||||  |||||||||||    
T  19933475 aatgttagcaacactctattttgaacactctctttaataccaactcatttattagtttaaatcattgttagtctacacttt 19933555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 27654474 - 27654526
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct 62  Q
    ||||||||||||  |||||||||| | |||||||||||||| ||||| |||||    
T  27654474 gagtaatgctagggacactctcttttcaacactctctctaacactcattctct 27654526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 33787989 - 33788053
Alignment:
Q  134 tttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||| || |||| ||||| |  | |||||||| |||||||||||||| |||||    
T  33787989 tttcatccaataaaagtgtgagtgttagagtggatgttgaaaagagagtgttgctagcactcctc 33788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 37586459 - 37586551
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaat 100  Q
    |||| ||||||||  |||| ||||| | ||||||||||| || ||||||| ||| | | | ||||||||| |||||||| |||||||||||||    
T  37586459 agaggaatgctagggacaccctcttttcaacactctctccaacactcactttctaattagcttaaatcatggtgggtctcacactttgaaaat 37586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 40925843 - 40925787
Alignment:
Q  138 atccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||||||||| ||| ||||||||||||| ||||| | ||| | ||||||||    
T  40925843 atccaataaaagagtaggtgttagagagagtattaaaaagagcgtgctcctagcatt 40925787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 40977589 - 40977661
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||||||| |||||||||||| ||| |||||||| ||||  |||| || ||| |||| ||||| ||||||||||    
T  40977589 atacattaatttcatccaatgaaaaagtaagtgttagaaggagtgttcaaatgtgaatgttgttagcattcct 40977661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 40991773 - 40991705
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatca 77  Q
    |||| |||||||||||||||| ||| | |||||||||||||  ||||||||| ||| ||| | ||||||    
T  40991773 agaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatca 40991705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 42925337 - 42925377
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||| ||||||||||| |||||||||||||| |||||    
T  42925337 aaagtggtcggacatacattaatttcatccaataagagagt 42925377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 47109402 - 47109334
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatca 77  Q
    |||||| ||||||||||||||| |||| || ||||| || |||||| ||| | ||| ||||||||||||    
T  47109402 agagtagtgctagcaacactcttttataaatactctttcaaatacttactttttcattggtttaaatca 47109334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 2e-69; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 22190124 - 22189936
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||  | | ||||||||||||||| ||||||||||||||||||||||||||||    
T  22190124 gagtaatgctaacaacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccac 22190025  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||    
T  22190024 acaaagtggtgggccatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcctc 22189936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 27888468 - 27888279
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  27888468 agaggaatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaaccca 27888369  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |||||||||||||||| ||||||| | || || |||| ||||||||||  | ||||||||||||||||||||||||||    
T  27888368 cacaaagtggtgggacatacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctc 27888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 27949454 - 27949270
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||| |||||||    
T  27949454 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaa 27949355  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | ||||||||||||  |||||||||||||||| |||||| |||| |||||||||| || |||||||||||||| |||| ||||||    
T  27949354 aatggtaggacataacttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgttgttagctttcctc 27949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 11824254 - 11824072
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||||||| ||| | || ||||||||||||||||| |||||||||||||||||| | ||    
T  11824254 gagtaatgctaacaacactctcttttgaacactctct--aatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctac 11824157  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| ||||    
T  11824156 acaaaatggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 33008276 - 33008101
Alignment:
Q  20 agcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggt 119  Q
    |||||||||||||| ||||||||||   |||||||| |||| | | |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  33008276 agcaacactctcttttgaacactct---taatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggt 33008180  T
Q  120 aggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     ||||||||| |||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||    
T  33008179 gggacatacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcctc 33008101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 14795315 - 14795124
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| | | |||||||||||| ||| | |||||||| ||||||||||| |    
T  14795315 agagtaatgctagcaacactctttt--gaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaa 14795218  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    || ||| |||| |||||||||||||||||||||||||||| ||| | || |||||||||| |||||||||||||||||||||||||| ||||||    
T  14795217 caaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattcttcgtta 14795124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 15242307 - 15242116
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| | | |||||||||||| ||| | |||||||| ||||||||||| |    
T  15242307 agagtaatgctagcaacactctttt--gaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaa 15242210  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgtta 202  Q
    || ||| |||| |||||||||||||||||||||||||||| ||| | || |||||||||| |||||||||||||||||||||||||| ||||||    
T  15242209 caaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattcttcgtta 15242116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 46517475 - 46517293
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||| ||    
T  46517475 agtaatgctagcaacactctcttttgaacagcctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaaccccca 46517376  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || | |||| ||| |||||||||||| |||||||||| |||| ||||||||  ||||| || |||||||||||||||||||||||    
T  46517375 cagaatggtgggatatacattgattttatccaataaatgagtgagtgctag--agagtgttaaaaagtgagtgttgctagcattc 46517293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 6442351 - 6442162
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| |||||||||| |||| |||||||| ||| ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||     
T  6442351 agagtaatgttagcaacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccc 6442252  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| |||| | ||||||||||||||||| ||||||| || | |||| |||||||||| ||||||| ||||||||| || ||||||||    
T  6442251 cacaaaatggtggaacatacattgatttcatacaataaatgactgagtgatagagagagtgttgaaaaatgagtgttgttaacattcctc 6442162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 32205250 - 32205071
Alignment:
Q  21 gcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggta 120  Q
    |||||||| |||| ||||||  |||||||||||||||||||| | | |||||||||||||| |  ||| ||||| ||||||||||||||||||| |||||    
T  32205250 gcaacactttcttttgaacatcctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggta 32205151  T
Q  121 ggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |||||||||||||||||||||||||||||||| ||   |||||||||| || |||||||||||||||||||||||||| ||||    
T  32205150 ggacatacattgatttcatccaataaaagagtgag---tagagagagtgttcaaaagtgagtgttgctagcattcctctttat 32205071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 31502504 - 31502647
Alignment:
Q  55 cactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaa 154  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||||||||| |    
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  155 gtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| | |||||||||||||||||||||||||||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttgctagcattcctc 31502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 32212864 - 32213049
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||| ||||||||||||||||| ||||||| || | ||||||||||||||| | ||||||||||||||||||| ||||| ||| |||||||||| ||    
T  32212864 agagtaacgctagcaacactctcttttgaacaccctatataatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacaca 32212962  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||||||| ||  |||||||||||||||||||||||||||||   ||||||||||||||| || ||||||||||||| |||||||||    
T  32212963 tacaaagtagtgagacatacattgatttcatccaataaaagatagagtgctagagagagtgttaaaaagtgagtgttactagcattc 32213049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 7775183 - 7775019
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||| ||||| |||||| |||||||||||||||||| |||||| || | | |||||||||||| ||| || |||||||||||||||||| ||||    
T  7775183 agtaatgctaacaacattctcttttgaacactctctctaatattcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcaca 7775085  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaa 176  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  7775084 caaagtggtgggacatacattgatttcatccaataaaagagtgagtgctatagagagtgttgaaaa 7775019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 12263458 - 12263619
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||     
T  12263458 aacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattc 12263557  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| ||||||||||   || |||||||||| ||||||||| |||||||||||| ||||||    
T  12263558 catccgataaaagagtggatgatagagagagtgttgaaaagtaagtgttgctagcgttcctc 12263619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 11692361 - 11692222
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||  | | |||||||||| |||| || |||||||||||||||||||| |||||    
T  11692361 taatactagcaacactctcttttgaacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacaca 11692262  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11692261 aagtggtaggacatacattgatttcatccaataaaagagt 11692222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 39254269 - 39254075
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||||| ||||| |||||| |||||||||||| ||| ||||||||||| | || ||||||| |||||||||||||| ||| ||||||||||| |    
T  39254269 agagcaatgctaacaacattctcttttgaacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaa 39254170  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |||||||||||   ||||||||| |||| || |||||||||||| ||||||| ||||| | ||||||||||| ||||||||||||| ||| ||||    
T  39254169 cacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctagcatttctctttat 39254075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 25686831 - 25686968
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||| |    
T  25686831 agtaatgttagcaacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccata 25686930  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaa 148  Q
     ||||||||| ||||||||||||||||||| |||||||    
T  25686931 aaaagtggtatgacatacattgatttcatcaaataaaa 25686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 48374428 - 48374618
Alignment:
Q  4 taaagagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattga 103  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||| |||||| || ||||||||| |||| ||    
T  48374428 taaaaagagtagtgctagcaacactctcttttgaacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaataga 48374527  T
Q  104 acccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    ||||| | |||||||| |||||| |||  ||| ||| |||||||||||| ||| ||  ||||||| || ||||||||||||||||||||||||    
T  48374528 acccatagaaagtggtgggacatgcatgaattccattcaataaaagagtgagtact--agagagtgttcaaaagtgagtgttgctagcattcc 48374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 24539116 - 24539302
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| || ||||||||||||| ||||||||||||| ||| |||||||| |||||||| |||| |||| |||| ||| ||    
T  24539116 agagtagtgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatcc 24539215  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    | | |||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||| |  ||||| |||||| |||||||||    
T  24539216 atataaagtggtgggacatatattgattttatccaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 24539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 6580002 - 6580188
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||||| |||||||||| | | ||||||||||||||| |||||||    
T  6580002 atgctaccaacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacctacacaaa 6580101  T
Q  115 gtggtaggacatacattgatttcatc---caataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || ||  |||||||||||| | || |    || |||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||||||    
T  6580102 gtagtgagacatacattgaatccaccaaaaaaaaaaaaagtgagtgcaagaaagagtgttgaaaagtgagtgttgctaccattcctc 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 13919967 - 13919781
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| ||| |||||||||||  ||||||||  | | ||| | |||||| ||| || | |||||||||||||| ||||||    
T  13919967 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaaccc 13919868  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||| |||||||| |||||||||||||||||| |||||||| |||  |||||||||||||||  | ||||| ||||||||||||||||    
T  13919867 acataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 17749881 - 17749695
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| || ||||||||||||| ||||||||||||| ||| |||||||| |||||||| |||| |||| ||||  || ||    
T  17749881 agagtagtgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatcc 17749782  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    | | |||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||| |  ||||  |||||| |||||||||    
T  17749781 atataaagtggtgggacatatattgattttatccaataaaagagtgagtgttagagagagtgtccaaaaaagagtgtcgctagcatt 17749695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 19422854 - 19423014
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||||| ||||| ||||||||||| | | |||||||||||||||||| ||||||||| |||||| |   | | |||| | ||| ||||||||||||||    
T  19422854 tgaacactatctctgatactcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgat 19422953  T
Q  135 ttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||||||||| |||||    
T  19422954 ttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattc 19423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 44350800 - 44350965
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    |||||||| |||||||||||| |||||||  ||||||||||||||||| |   ||||||||||||||||| ||||||||||||||||||||||| | |||    
T  44350800 taatgctaacaacactctcttttgaacaccatctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaaca 44350899  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagt 178  Q
    |||||    ||||||||||||||| ||||||||||| |||   || |||||| ||| |||||||||    
T  44350900 aagtgacgagacatacattgatttgatccaataaaaaagtggatgttagagaaagtgttgaaaagt 44350965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 19494409 - 19494521
Alignment:
Q  85 tctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||| ||||||| |||| | ||||| |||||     
T  19494409 tctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgc 19494508  T
Q  185 tgctagcattcct 197  Q
    |||||||||||||    
T  19494509 tgctagcattcct 19494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 26703438 - 26703621
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||| | | ||| | |||| | ||| || | ||||||||  |||| ||||||||| |    
T  26703438 aatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgtaggacctacactttagaaatggaacccacata 26703537  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |  | ||||  ||||||||||||||||||||    
T  26703538 aagtggtgagacatacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaaa--gagtgttgctagcattcctc 26703621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 44510999 - 44511112
Alignment:
Q  78 ttgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaag 177  Q
    |||||| ||||||| ||||||||||||| || |||||||| |  ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  44510999 ttgtggatctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaag 44511098  T
Q  178 tgagtgttgctagc 191  Q
    | ||||||| ||||    
T  44511099 taagtgttgttagc 44511112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 17354598 - 17354710
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||  | ||||  |||||||    
T  17354598 ctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgtt 17354697  T
Q  186 gctagcattcctc 198  Q
    |||||||||||||    
T  17354698 gctagcattcctc 17354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 25092712 - 25092840
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||| |||||| ||||| |||| ||||||||||| |||||||||| |||||||||||||||||| |||| ||| |||||||  ||||   ||||    
T  25092712 tggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcggaagag 25092811  T
Q  166 agtattgaaaagtgagtgttgctagcatt 194  Q
    ||| ||||||||||||||||| |||||||    
T  25092812 agtgttgaaaagtgagtgttgttagcatt 25092840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 25428472 - 25428659
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaattgaaccc 107  Q
    |||| |||| ||||||||||||||| ||| |||||||| ||  ||||||||| | | ||| | |||||| ||| || ||||||||||| ||||  |||||    
T  25428472 agagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaaccc 25428571  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||| |||||||| ||||||||||||||||||  |||||||||||| ||| ||| | |||||  | ||||| |||||||||||||||||    
T  25428572 acataaagtggtgggacatacattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 45909636 - 45909453
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||| | | ||| | |||||| ||| || | |||| |||| |||| ||||||||| |||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaa 45909537  T
Q  115 gtggtaggacatacattgatttcatccaat-aaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||||| |||||||||||||||||| ||||| |||||||| | |||||| ||||||  | |||||  ||||||| ||||||||||    
T  45909536 gtggtgggacatacattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgttgatagcattcct 45909453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 32178824 - 32178981
Alignment:
Q  35 tgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||| ||||||| ||| ||||||||| | || |||||||||||||| || ||||||||||||||||||   | ||| |||||| | ||||||||| ||    
T  32178824 tgaacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaat 32178922  T
Q  135 ttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||||||| ||||||||||  ||||||| ||||||||||| | || |||||||||    
T  32178923 ttcatccaataaaatagtaagtgct--agagagtgttgaaaagtgaattttactagcattc 32178981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 36845573 - 36845701
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  || ||| ||||||||||| |||||||||||| || | || |||     
T  36845573 tggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtgaga-atatattgatttcattcaataaaagagtgagcgataaagaa 36845671  T
Q  166 agtattgaaaagtgagtgttgctagcattc 195  Q
    ||| ||||||| ||| |||||||| |||||    
T  36845672 agtgttgaaaaatgaatgttgctaacattc 36845701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 22786260 - 22786149
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| |||| ||||||||| ||||||||  ||||||||||||||||| | ||||||| ||| |||||||||||||||  | ||||| |||||||    
T  22786260 ctacactttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 22786161  T
Q  186 gctagcattcct 197  Q
    ||||||||||||    
T  22786160 gctagcattcct 22786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 7459527 - 7459353
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||||||||||| |  | |||| ||||||| ||||||||||||| | | |||||||||| ||||||| |||| | |||||||||||| | ||||    
T  7459527 agtaatgctagcaacacttttatttgaatactctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcaca 7459428  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
     |||||||| | | |||||||||||| ||| ||||||||| | |||  || ||||| | || |||||||||||||    
T  7459427 taaagtggtggaatatacattgattttatcgaataaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 8073367 - 8073473
Alignment:
Q  94 tgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcat 193  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||  ||| | ||||||| |||||||| |||| ||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgttactagtat 8073466  T
Q  194 tcctcgt 200  Q
    |||||||    
T  8073467 tcctcgt 8073473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 12271095 - 12270985
Alignment:
Q  85 tctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||   ||||| ||||||| |||||||||  ||||    
T  12271095 tctacactttgaaaatagaacc-acacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtgt 12270999  T
Q  185 tgctagcattcctc 198  Q
    ||||||||||||||    
T  12270998 tgctagcattcctc 12270985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 9649053 - 9648919
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattga--tttcatccaataaaagagtaagtgctagag 163  Q
    |||||||||||||||||||| ||||| ||| |||  |||||| ||||||||||| | |||||||||||  ||| ||||||| ||| ||| ||||||| ||    
T  9649053 tggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtgctacag 9648954  T
Q  164 agagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||| ||||| | |||||||||||||    
T  9648953 agagtatttaaaaatgagtatcgctagcattcctc 9648919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 19840883 - 19841022
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    ||||||||||||||||| || ||| |||||||||||  ||||||||| | | ||| | |||||| | | || | ||||||||| |||| ||||||||| |    
T  19840883 aatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaatataggacctacactttggaaatggaacccacata 19840982  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  19840983 aagtggtaagacatacattgatttcaaccaataaaagagt 19841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 32605457 - 32605333
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||||  |  |||||||||||||||||||| |||||||| | ||||||| | |||||    
T  32605457 tttaaatcattgtgagcctacactttaaaaattgaatccacacaaagtaatgagacatacattgatttcatcc-ataaaagaatgagtgctaaaaagagt 32605359  T
Q  169 attgaaaagtgagtgttgctagcatt 194  Q
     ||||||||  |||||||||| ||||    
T  32605358 gttgaaaagcaagtgttgctaacatt 32605333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 10933978 - 10934149
Alignment:
Q  28 tctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacata 127  Q
    |||||| ||||| |||| | ||||||||| ||||| | | |||||||||||||||||| || |||||| |||| ||| ||| ||||||||||  ||||||    
T  10933978 tctcttttgaacgctctttttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacata 10934077  T
Q  128 cattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
     ||| |||| ||||||||||||| | | |  |||||||||| || |||  |||||||||  |||||||||||    
T  10934078 tattaattttatccaataaaagaatgaataatagagagagtgttaaaacatgagtgttgaaagcattcctcg 10934149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 27320547 - 27320441
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    ||||| |||||| |||| |||||||||| |||||||| ||| | |  ||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |    
T  27320547 caacattctcttttgaatactctctctactactcactttcttattcatttaaataattgtgggtctacactttaaaaattgaacctacacaaaatggtgg 27320448  T
Q  122 gacatac 128  Q
    || ||||    
T  27320447 gatatac 27320441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 37549693 - 37549616
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |||||||| |||| ||||||||||||||||||||||||| |||  | ||||| |||||||||||||||||||| ||||    
T  37549693 tacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctctttat 37549616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 13919894 - 13919966
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| |||||||| |||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  13919894 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 13919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 14759825 - 14759669
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| ||||||| |||  || |||||| | | ||| | |||| | ||| || | ||||||||| |||| ||||| ||  |    
T  14759825 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctaccta 14759726  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagta 169  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||| |||||||    
T  14759725 aagtggtgggacataaattgatttcactcaataaaagagtgagtgctagggagagta 14759669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 10619464 - 10619574
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    |||||||||  ||| ||||||||| |||||| | ||| ||| |||||||||| |||| || |||||| ||||||||||||||  | ||||| ||||||||    
T  10619464 tacactttgtcaatggaacccacataaagtgatgggatatatattgatttcacccaa-aagagagtaggtgctagagagagtgatcaaaagagagtgttg 10619562  T
Q  187 ctagcattcctc 198  Q
    ||||||||||||    
T  10619563 ctagcattcctc 10619574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 45909570 - 45909636
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    ||||||||||| | ||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||    
T  45909570 tacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 46994366 - 46994496
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacacaaagtg 117  Q
    ||||||||||||||| | ||| |||||||||| ||||||| | | | ||| ||||||||| |||||||| |||||||| |||| ||   |||  ||||||    
T  46994366 tagcaacactctctttttaacgctctctctaacactcacttttttattggcttaaatcatggtgggtctcacactttggaaatggatatcacttaaagtg 46994465  T
Q  118 gtaggacatacattgatttcatccaataaaa 148  Q
    || || ||||||||||||||||| |||||||    
T  46994466 gtgggtcatacattgatttcatctaataaaa 46994496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 14759757 - 14759830
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
    |||||| ||||||||||||||||||||  ||||||| ||||||  | ||||| |||||||||||||||||||||    
T  14759757 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctcg 14759830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 19840948 - 19840879
Alignment:
Q  129 attgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||||||||||||| |||||||||||||||  | ||||  ||||||||||||||||||||    
T  19840948 attgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcattcctc 19840879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 36845495 - 36845566
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctaca 90  Q
    |||||||||||| || |||| |||||||  |||| ||||||||| | |||||||||||||||||||||||||    
T  36845495 tagcaacactctattttgaatactctctagaatattcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 9111406 - 9111516
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    |||| ||| ||||||||| ||| | |||||||||||| ||| |||||||||||| ||||||||||| | ||||| | ||||| || |||| ||| ||||     
T  9111406 tacattttaaaaattgaatccaaataaagtggtaggatatagattgatttcatctaataaaagagtgaatgctaaatagagtgttaaaaaatgaatgtta 9111505  T
Q  187 ctagcattcct 197  Q
    || ||||||||    
T  9111506 cttgcattcct 9111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 26703506 - 26703436
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    |||||| |||||| ||||||||||||| |||||||||||||||  | | ||| ||||||||||||||||||    
T  26703506 tacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcattcc 26703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 31874174 - 31874117
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacacttt 94  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||    
T  31874174 aacactctctcgaatactcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 2520698 - 2520630
Alignment:
Q  130 ttgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| ||||||||||||| |||| | |||||||| |||||||| ||||||| |||||| |||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcctc 2520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 25428545 - 25428477
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||  | ||||| ||||||||||| ||||    
T  25428545 tacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatt 25428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 27320294 - 27320226
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| || |||||||||||| |||| | |||||||| ||||||| ||| |||||||||||||    
T  27320294 tacattgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaatgttgctagcatt 27320226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 31874105 - 31874061
Alignment:
Q  121 ggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  31874105 ggacatacattgatttcatccaataaaaaagtgagtgctagagag 31874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 31759943 - 31759839
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    ||||||||||||||| ||||| | ||||||||||  |||||||| | ||| | ||| ||||||||||| | ||||| |||||  ||||||||  ||||||    
T  31759943 taatgctagcaacaccctcttttaaacactctct--aatactcattttcttattggcttaaatcattgcgagtctatactttataaattgaagtcacaca 31759846  T
Q  113 aagtggt 119  Q
    |||||||    
T  31759845 aagtggt 31759839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 32055705 - 32055594
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||||| |||| ||||||| ||||| ||| | ||   || |||||||| ||||||| | ||||||||||||||||| |||| |||| ||||||     
T  32055705 tggtttaaatcaatgtgagtctacagtttgacaatagtacttgcataaagtggtgggacataaaatgatttcatccaataaatgagttagtgttagagat 32055606  T
Q  166 agtattgaaaag 177  Q
    ||| || |||||    
T  32055605 agtgttcaaaag 32055594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 7775009 - 7774944
Alignment:
Q  30 tcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttga 96  Q
    |||| |||||||||||||||||| | ||||||| | |||||||||||||||| |||| |||||||||    
T  7775009 tcttttgaacactctctctaatatttactctcttattggtttaaatcattgt-ggtccacactttga 7774944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 12167365 - 12167315
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtct 87  Q
    |||||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  12167365 aacactctctttaatactcactttcttattggtttaaatcattgtgggtct 12167315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 38065328 - 38065398
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct 87  Q
    ||||||||||||||||  | ||||||||||| |||||||||| ||| | ||||||||||||  ||||||||    
T  38065328 gctagcaacactctctcttcaacactctctcaaatactcactttcttattggtttaaatcaaggtgggtct 38065398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 31959967 - 31960036
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||| |||||||||||||||  ||| |||||||||||||||  | ||||| |||||||| |||||||    
T  31959967 atacattaatttcatccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgttagcatt 31960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 3855861 - 3855905
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  3855861 tggtttaaatcattgtaggtctgaactttgaaaattgaacccaca 3855905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 10477340 - 10477284
Alignment:
Q  92 tttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    ||||||||||||||| ||||||| ||||   ||||||| ||||||||||||||||||    
T  10477340 tttgaaaattgaacctacacaaaatggtgaaacatacactgatttcatccaataaaa 10477284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 27888278 - 27888346
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatca 77  Q
    |||| |||||||||||||||| ||| ||| |||||||||||| |||||| |||||| ||| | ||||||    
T  27888278 agaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatca 27888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 31628180 - 31628080
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    ||||||| | |||||  ||| |||||||| ||| ||||||| ||||||| | ||||||||||||| || |||| |||||||  |||| ||||||| ||||    
T  31628180 aatgctaacgacacttgcttttgaacactatctttaatacttactctcttattggtttaaatcatcgtaggtcaacactttataaatagaacccaaacaa 31628081  T
Q  114 a 114  Q
    |    
T  31628080 a 31628080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 42863573 - 42863617
Alignment:
Q  154 agtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| |||||||||| || ||||||||||||||||||||||||||    
T  42863573 agtgttagagagagtgtttaaaagtgagtgttgctagcattcctc 42863617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 45206025 - 45206077
Alignment:
Q  105 cccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    ||||||||| |||||  |||||||||||||||||||| || ||||||||||||    
T  45206025 cccacacaatgtggtgagacatacattgatttcatccgatgaaagagtaagtg 45206077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 46068036 - 46067940
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgct-agagagagtattgaaaagtgagtgttgctagca 192  Q
    |||| ||||||||| |||||||| | |||||||||||||||| |||||||  |||| |||| | ||||||||   | ||||| ||||||||||||||    
T  46068036 aaatggaacccacataaagtggtggaacatacattgatttcaaccaataagggagtgagtgttaagagagagcgctaaaaagagagtgttgctagca 46067940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 1688127 - 1687985
Alignment:
Q  51 tactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    |||||||||| | | ||| ||||||| |||| ||||||||||||| ||||  ||| ||  |||||||||  |||||||||  |||||||||||  ||| |    
T  1688127 tactcactcttttattgggttaaatcgttgtaggtctacactttggaaataaaactcatgcaaagtggtgagacatacatcaatttcatccaaagaaaaa 1688028  T
Q  151 gtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    || | ||  ||||||||| || |||| | |||||||||||||||    
T  1688027 gtgaatgacagagagagtgttaaaaaat-agtgttgctagcatt 1687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 17813857 - 17813923
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagaga 164  Q
    |||| |||| ||||||||||||| || |||||||||||||| |  ||||||||||| |||||||||||    
T  17813857 aaatagaactcacacaaagtggtggg-catacattgatttcttttaataaaagagtgagtgctagaga 17813923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 23934021 - 23934084
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctag 190  Q
    |||||||||| | ||||||||||||||||||||||| | |||  | ||||| ||||||||||||    
T  23934021 acattgattttacccaataaaagagtaagtgctagacaaagtgcttaaaagagagtgttgctag 23934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 24539307 - 24539256
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||| ||||||||| |||||||||| || ||||||||||||| |||||||||    
T  24539307 agagaaatgctagcgacactctcttttggacactctctctaacactcactct 24539256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 27888400 - 27888467
Alignment:
Q  131 tgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| | ||||||| ||||| |||| ||||||||||  | ||||| ||||||||||||||||||||    
T  27888400 tgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctc 27888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 28713101 - 28713054
Alignment:
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    ||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  28713101 acaaagtggtgagacatatattgatttcattcaataaaagagtaagtg 28713054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 30742544 - 30742615
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctaca 90  Q
    |||||||||||| || ||||||||| |||||||| ||| | ||| | || ||||||||||||| ||||||||    
T  30742544 tagcaacactctattttgaacactcactctaatattcattttcttattgatttaaatcattgtaggtctaca 30742615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 31731282 - 31731439
Alignment:
Q  42 tctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggac----atacattgatttc 137  Q
    ||||||||||||||| | ||| | |||||||||| || | ||||||| | |||| |||| ||||  |||||||||||| | ||    ||||||||||  |    
T  31731282 tctctctaatactcattttcttattggtttaaattatcgcgggtctatattttggaaatagaacatacacaaagtggtggaacatatatacattgatcac 31731381  T
Q  138 atccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    |||||||| || | | ||||  | ||||||| || ||||||||||||||||| |||||||    
T  31731382 atccaatagaatattcagtg--atagagagtgttcaaaagtgagtgttgctaacattcct 31731439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 2520715 - 2520773
Alignment:
Q  140 ccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| | || |||| ||| |||||| |||||||| ||||||||||||||||||||    
T  2520715 ccaataaatgtgtgagtgatagtgagagtgttgaaaagagagtgttgctagcattcctc 2520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 23564086 - 23564156
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||| |  |||| |||||||||||||||| |||| || ||||||||||  |||||||||| ||||    
T  23564086 tggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaattt 23564156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 20954798 - 20954859
Alignment:
Q  131 tgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    |||||| | ||||||||| ||| |||| | |||||||| |||||||| ||||||||||||||    
T  20954798 tgatttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 20954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 38065415 - 38065485
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    |||||||| ||| ||||||| |||||||||||||||| ||| |||| |  | |||||||||||||| ||||||    
T  38065415 aaagtggtgggagatacattaatttcatccaataaaaaagttagtgtt--aaagagtattgaaaagagagtgt 38065485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 22786152 - 22786196
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcact 58  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||    
T  22786152 aatgctagcaacactctcttttgagcactctctctagcactcact 22786196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32205075 - 32205115
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctcta 49  Q
    |||| |||||||||||||||| ||| |||||||||||||||    
T  32205075 agaggaatgctagcaacactcacttttgaacactctctcta 32205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35549643 - 35549683
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctcta 49  Q
    |||||| |||||||||||||||||| | |||||||||||||    
T  35549643 agagtagtgctagcaacactctcttttcaacactctctcta 35549683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 42274656 - 42274688
Alignment:
Q  122 gacatacattgatttcatccaataaaagagtaa 154  Q
    ||||||||||||||||||| |||||||||||||    
T  42274656 gacatacattgatttcatcaaataaaagagtaa 42274688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 42863613 - 42863569
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcact 58  Q
    |||||||||||||||| ||| | |||||||||||||| |||||||    
T  42863613 aatgctagcaacactcacttttaaacactctctctaacactcact 42863569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 1e-67; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 1977167 - 1977356
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||    
T  1977167 agagtaatgctagtaacacactcttttgaacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaaccca 1977266  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||| || |||||||||| |||||||||||||||    
T  1977267 cacaaagtggttggacatacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctc 1977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 16983580 - 16983391
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||     
T  16983580 agagtaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccc 16983481  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| | ||||||| | |||||| ||||||||||  ||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  16983480 cacaaagtgatgggacataaaatgattttatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgttgctagcattcctc 16983391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 195
Target Start/End: Original strand, 28413861 - 28414049
Alignment:
Q  6 aagagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaac 105  Q
    ||||||||||||||||||  |||||||| ||||||||| | |||||||||| ||| | | |||||||||||||| |||||||| ||||||||||||||||    
T  28413861 aagagagtaatgctagcagtactctcttttgaacactcgc-ctaatactcattcttttattggtttaaatcattatgggtctatactttgaaaattgaac 28413959  T
Q  106 ccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||||||||||||| |||||||||||||||||||| ||||||| ||| || |||||||||||| ||||||||||||||||| ||||||||    
T  28413960 tcacacaaagtggtgggacatacattgatttcatcgaataaaaaagtgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 5980057 - 5979878
Alignment:
Q  17 gctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagt 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||||| ||| ||||||| ||  |||||||||||||||||||||||||||||    
T  5980057 gctagcaacactctcttttgaacactctctctaatactcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagt 5979959  T
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||| |||||||||||||| |||||||||| ||||||   | ||||||||||| ||||||||| ||||||||||||||||||    
T  5979958 ggtgggacatacattgatctcatccaatagaagagtgtctactagagagagtgttgaaaagtaagtgttgctagcattcct 5979878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 34861184 - 34861368
Alignment:
Q  7 agagagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacc 106  Q
    ||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||| | |||||||||| ||||||||     |||||||||||||||||    
T  34861184 agagactaatgctagcaacactctcttttgaacaccctccctaatactcactctcttattggtttaaattattgtggg-----actttgaaaattgaacc 34861278  T
Q  107 cacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     |||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||| | ||||||||||||||    
T  34861279 tacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgct--agagagtgttgaaaagtgagaggtgctagcattcctc 34861368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 32072255 - 32072098
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||||||| | || ||||| | || ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  32072255 aacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcattt 32072156  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  32072155 catccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 8904037 - 8903852
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||| ||| |||||||||||| ||||||   | |||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||    
T  8904037 gagtaatactaacaacactctcttttgaacatcttttctattacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgac 8903938  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||| |||||||||||||||||||| ||||||  ||| ||| ||||||||||| ||||||| |||||||||||| |||||    
T  8903937 acaaagtggtgggacatacattgatttcatcaaataaacaagtgagtactagagagagtgttgaaaaatgagtgttgctaacattc 8903852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 9952752 - 9952936
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||| | ||||||||||||||| ||||||||||||  |||||||| | ||| | |||||||||||||||||||| ||||||||||||||||||| ||    
T  9952752 agagtaacgttagcaacactctctt-tgaacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactca 9952850  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| |||||| ||||||||||||||||||||| | | ||||||||||||||| ||||||||| | |||| ||||||||    
T  9952851 cacaaagtggtgggacatgcattgatttcatccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgttactagcatt 9952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 35151728 - 35151912
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||||||||||||||| |||||||||| | ||||| ||||| ||| | | |||| ||| |||||||||||||||||| ||||||||| || |||||    
T  35151728 aatgctagcaacactctcttttgaacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaa 35151827  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | |||| |||||||||||||||||||||||||||||||||| ||||| | ||||| || |||||||||||||||||| |||||||    
T  35151828 aatggtgggacatacattgatttcatccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttgctagtattcctc 35151912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 24055932 - 24056098
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||||||||| |||||||| ||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||||  |||||||||||| |    
T  24055932 caacactctcttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgg 24056031  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgct 188  Q
    |||||||||| ||||||||  |||||||||  ||||||| ||||||  |||||||||||||||||||    
T  24056032 gacatacattaatttcatctgataaaagagcgagtgctaaagagagcgttgaaaagtgagtgttgct 24056098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 17499229 - 17499386
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||||||| ||  ||  ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| |    
T  17499229 agagtaatgctagcaacactctttt--gacaactctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaa 17499326  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||| |||| ||||||| ||||||||||||||||||||||   |||||||||||||||    
T  17499327 cacaaaatggtgggacatatattgatttcatccaataaaagatagagtgctagagagagt 17499386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 8914929 - 8914768
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||||   || |||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||    
T  8914929 aacactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttt 8914830  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     ||||||| ||||||| |||| |||||||||   | ||||||||||||||||||||||||||    
T  8914829 tatccaatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctc 8914768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 13407322 - 13407507
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||| |||||||| |||||||| |||||||||||||| ||||||||  |    
T  13407322 aatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccactta 13407421  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || |||| |||||||||||||||| ||||||||||| ||| |||| |||||||||| |  ||||  ||||||||||  ||||||||    
T  13407422 aaatggtgggacatacattgattttatccaataaaaaagttagtgttagagagagtgtccaaaaaagagtgttgctgacattcctc 13407507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 7493353 - 7493530
Alignment:
Q  26 actctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccc-acacaaagtggtaggac 124  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| |||    
T  7493353 actctcttatgaacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaacccaacacaaagtggtaagac 7493452  T
Q  125 ataca----ttgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | |||     |||||||||||||||||| | |||||| |||||||||| || |||||||||| ||| || ||||||||    
T  7493453 acacaatatatgatttcatccaataaaaaaataagtgttagagagagtgtttaaaagtgagtattgttaacattcctc 7493530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 43506687 - 43506535
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| | |||||||||||||||||| | |||||||||||||  |||||    
T  43506687 ctctctaatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatcca 43506588  T
Q  143 ataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| ||| |||| |  ||||||| || ||||||||||||||||||||||||||    
T  43506587 ataaaa-agtgagtgtt--agagagtgttcaaaagtgagtgttgctagcattcctc 43506535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 23685313 - 23685131
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||| |||     | ||||||||||||||| |  ||||||||||| |||| |||| |     
T  23685313 agagtagtgctagcaccactctcttttgaacactctctctaatactaactt----attggtttaaatcattgcgaatctacactttggaaatagaactcg 23685218  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||  ||||||| |  |||||||| ||||||||||||||    
T  23685217 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcttaagagagtgtgcaaaagtgaatgttgctagcattc 23685131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 41727588 - 41727427
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||||||||||||||||||   |||||||||||||| || |||||||| || ||||  ||||| |||||||| ||| ||||||||||||||||    
T  41727588 aacactctctctaatactcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattt 41727489  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     ||| || |||||||| | ||||| ||||||| || ||||||||||||||  ||||||||||    
T  41727488 tatctaacaaaagagtgattgctaaagagagtgttcaaaagtgagtgttgtcagcattcctc 41727427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 36804833 - 36804992
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||| | |||||||||||| | |||| ||||||||||||| ||||||| | || ||||||| ||||||| | || | |||||||||||||||||    
T  36804833 agagaaatgccaacaacactctcttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaaccca 36804932  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||| |||| ||||||||||||||| |||||||||| | ||| |||  ||||||||||    
T  36804933 cacaaaatggtgggacatacattgattccatccaataatatagttagtattagagagagt 36804992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 1961400 - 1961295
Alignment:
Q  77 attgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaa 176  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||| ||||||||||||| |||||| ||||||||| || |||||    
T  1961400 attgttggtctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaagattaagtggtagagagagcatcgaaaa 1961301  T
Q  177 gtgagt 182  Q
    ||||||    
T  1961300 gtgagt 1961295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 14236496 - 14236335
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||||||||||||||||||   |||||||||| |||||| | ||||||||| ||||||||||  |||||||||||| |||||||  || ||||    
T  14236496 aacactctctctaatactcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacatattttaattt 14236397  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | |||||||||| | | |||| |||| | ||| |||||||| |||||||| || ||||||||    
T  14236396 cttccaataaaaaaatgagtggtagaaaaagtgttgaaaagagagtgttgttaacattcctc 14236335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 4675079 - 4674911
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    ||||||||| || |||||||||| ||||||| ||| | | | | ||||||||||||||||| | |||||||||||||||| ||| ||||||||||| |||    
T  4675079 caacactctattttgaacactctttctaatattcatttttttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatag 4674980  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |    |||||||||||||| ||||||||||| |||  || |||||||||| |||||||| |||||||| |||||    
T  4674979 g----acattgatttcatctaataaaagagtgagttttaaagagagtatt-aaaagtgaatgttgctaacattc 4674911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 6387741 - 6387564
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    ||||||||||| || ||| || ||||||||||||| ||||| ||||| | ||| ||||| || |||||||| || |||||| |||| ||||||||| |||    
T  6387741 tgctagcaacaatcccttttggacactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaa 6387642  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
     |||| |||||||||||||||| ||||||||||||||| |||| ||||||| ||    ||||| ||||||||||||||||    
T  6387641 atggtgggacatacattgattttatccaataaaagagtgagtgttagagagtgtcc--aaaagagagtgttgctagcatt 6387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 31301286 - 31301112
Alignment:
Q  23 aacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg 122  Q
    ||||||||||| || ||| | |||| |||| ||| ||||| | |||||||||| ||| ||  ||||||| |||||||| |||| ||||||||||||| |     
T  31301286 aacactctcttttgtacattatctcaaatattcattctcttattggtttaaattattatga-tctacacattgaaaatagaactcacacaaagtggtgga 31301188  T
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||||||||||||||||| |||||  || | ||| || |||||||||||||  |||||||||||    
T  31301187 acatacattgatttcatccaataaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagcattcctc 31301112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 11962676 - 11962857
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||  ||||| ||||||||||   |||||||| || | | | |||||||||||||| ||| |||||||||||||||||||||| |    
T  11962676 agagcaatgctagcaacatcctcttttgaacactcttgttaatactcgcttttttattggtttaaatcatt-tggatctacactttgaaaattgaaccta 11962774  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagc 191  Q
    || ||| |||| ||| |||| ||||||| || |||||||||||| |||  || |||| || ||||||||||||||| ||||||    
T  11962775 cataaaatggtgggatatactttgattttattcaataaaagagtgagtattaaagagcgtgttgaaaagtgagtgtcgctagc 11962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 13214680 - 13214542
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||| ||||||||| ||| || ||||||||||| ||||||||| |||||| | | ||||| |  |||||||||||||||||||||||||||| | ||    
T  13214680 gagtaatactagcaacattctattttgaacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaattgaatctac 13214581  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    ||||| || | ||||||||||| ||| ||||||||||||    
T  13214580 acaaaatgatgggacatacattaattccatccaataaaa 13214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 35689651 - 35689490
Alignment:
Q  25 cactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacacaaagtggtagga 123  Q
    ||||||||| ||| |||||||||||  ||||||| | | | ||| | ||| || |||||| || ||||||||||||| |||| |||| |||||||| |||    
T  35689651 cactctcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactcacataaagtggtggga 35689552  T
Q  124 catacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  | ||||| |||||||    
T  35689551 catacattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 35689490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 45246613 - 45246432
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||| |||||||||||| |||| ||||||||  |||| | |||||| | || ||||||||||||  | ||||||||||| |||| |||| | || ||||    
T  45246613 tgctatcaacactctcttttgaatactctctcctataccccctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaag 45246514  T
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtat-tg-aaaagtgagtgttgctagcattc 195  Q
    ||||  ||||||||||||||| ||||||||||| ||| ||||||| ||||||| | || ||||||||||||| |||||||||    
T  45246513 tggtgagacatacattgattttatccaataaaatagtgagtgctaaagagagtgtgtgcaaaagtgagtgttactagcattc 45246432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 7599493 - 7599605
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| |||  ||||||||| |||||| | ||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||  |||||||    
T  7599493 ctacactttggaaaaggaacccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgtt 7599592  T
Q  186 gctagcattcctc 198  Q
    |||| ||||||||    
T  7599593 gctaacattcctc 7599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 17741552 - 17741680
Alignment:
Q  40 actctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcat 139  Q
    ||||||||||||||||| |   | | ||||||||| |||| | ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||||    
T  17741552 actctctctaatactcatttctttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcat 17741651  T
Q  140 ccaataaaagagtaagtgctagagagagt 168  Q
    ||||||||  | || ||||||||||||||    
T  17741652 ccaataaacaattacgtgctagagagagt 17741680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 6098784 - 6098928
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||||||||| | |||| ||||||||||||||||||||| | || ||||||| ||||||| |||||||||||||||||||||   ||||||||||| |    
T  6098784 caacactctcttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaacatgcacaaagtggtgg 6098883  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    || ||||  | ||||||||| ||||||  || |||| ||||||||||    
T  6098884 gatatac--taatttcatcctataaaaatgtgagtgttagagagagt 6098928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 35797551 - 35797426
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||||||  ||||||||||||   | || ||||||||||||||| | |||||||| |||||||||| | ||||||||||| | ||||||||||||||    
T  35797551 aacactctctacaatactcactctt--attgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattt 35797454  T
Q  137 catccaataaaagagtaagtgctagaga 164  Q
     ||||||||||||||| | |||||||||    
T  35797453 tatccaataaaagagtgaatgctagaga 35797426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 36629816 - 36629656
Alignment:
Q  37 aacactctctctaatactcactctctc-agtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatt 135  Q
    |||||||||||||||||||| | | |  | ||||||| ||||||| |||||||||| ||| |||| |||||||||||  ||| ||  ||||||||| |||    
T  36629816 aacactctctctaatactcattttttttattggtttagatcattgcgggtctacacattggaaatagaacccacaca--gtgataatacatacatttatt 36629719  T
Q  136 tcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| ||||||||||||||||||| ||| ||| || |||| ||||| ||| |||||||||||    
T  36629718 tcatctaataaaagagtaagtgctaaagatagtgttcaaaaatgagtattgttagcattcctc 36629656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 9192126 - 9192040
Alignment:
Q  70 ttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagt 156  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||| |||| || |||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtgggatatacattgattttatccgatgaaagagtaagt 9192040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 17716977 - 17716856
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||| | || ||||||| ||||||||||||||||||||  || |||| |  | |||||    
T  17716977 tttaactcattgtgggtctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgtt--aaagagt 17716880  T
Q  169 attgaaaagtgagtgttgctagca 192  Q
      |||||||||||||||| |||||    
T  17716879 gatgaaaagtgagtgttgttagca 17716856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 4319787 - 4319909
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||| | ||| ||||||||||||||||||| ||  ||||||||||| |  ||||| ||||||||| ||| ||||||| ||||| ||||| ||| | |    
T  4319787 tttaaattagtgtaggtctacactttgaaaattaaattcacacaaagtgatgagacatgcattgattttatctaataaaaaagtaaatgctaaagaaaat 4319886  T
Q  169 attgaaaagtgagtgttgctagc 191  Q
    ||||||||||| |||||||||||    
T  4319887 attgaaaagtgggtgttgctagc 4319909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 9193568 - 9193427
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||||||||||||||||||| || ||||  ||  |||||| || | | | | |||||| ||| ||||| |||||||||||||||||||||||  |    
T  9193568 agagtaatgctagcaacactctcttttgtacacgatcattaatacacatttttttattggttttaattattgtaggtctacactttgaaaattgaactta 9193469  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    |||||||| ||  |||||||| | |||||||| |||||||||    
T  9193468 cacaaagtagtgagacatacactaatttcatcaaataaaaga 9193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 9453621 - 9453502
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtggtaggacatacattgatt 135  Q
    |||||||||| ||||||||||||||| | ||| |||||||  |||||||| |||| ||||||||  ||||||||  |||||| | |||||| ||||| ||    
T  9453621 aacactctctttaatactcactctctaattgggttaaatctatgtgggtcatacattttgaaaagggaacccacgtaaagtgatgggacatgcattggtt 9453522  T
Q  136 tcatccaataaaagagtaag 155  Q
    ||||||||||| ||||||||    
T  9453521 tcatccaataagagagtaag 9453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 1423855 - 1423746
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaaga--gtaagtgctagagagagtattgaaaagtgagtg 183  Q
    |||||||||||||||||||| |  |||||||||| |||||||||||||||| ||| |||||||||  |||| | ||  | ||||| ||||||||||||||    
T  1423855 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatact--aaagagtgttgaaaagtgagtg 1423758  T
Q  184 ttgctagcattc 195  Q
    ||||||| ||||    
T  1423757 ttgctagtattc 1423746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 34952628 - 34952504
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactct-ctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||| |||||||||| | || |||||||||||||||||||| | | | |||  ||||||||||||||| |||||||||  ||||||||||||  |     
T  34952628 gagtaatgttagcaacactattttttgaacactctctctaatacttatttttctct-tggtttaaatcattgcgggtctacatattgaaaattgaaatcc 34952530  T
Q  109 cacaaagtggtaggacatacattgat 134  Q
    |||||| |||| ||||||||||||||    
T  34952529 cacaaaatggtgggacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 35819259 - 35819198
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacataca 129  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||    
T  35819259 gtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 17915986 - 17915849
Alignment:
Q  21 gcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggta 120  Q
    |||||||||| || | |||||||||||||||||||||| | | | | ||||||||||||||  ||    |||||||||||| |||| ||||||| |||||    
T  17915986 gcaacactcttttttaaacactctctctaatactcactttattattagtttaaatcattgtaagt----actttgaaaattaaaccaacacaaaatggta 17915891  T
Q  121 ggacatacattgatttcatccaataaaagagtaagtgctaga 162  Q
    |||||| | ||  ||| ||| |||||||||||||||| ||||    
T  17915890 ggacattcgttatttttatctaataaaagagtaagtgttaga 17915849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 1205936 - 1205829
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| |||| ||||||| | ||||||||  |||||||||| |||| | | ||||||||||| ||||||| |||||||  | ||||| |||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtgagtgctaaagagagtgctcaaaagagagtgtt 1205837  T
Q  186 gctagcat 193  Q
    ||||||||    
T  1205836 gctagcat 1205829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 43026400 - 43026321
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||||||| |||| ||||||||| ||||||| ||||||||||||||||| | | ||||||| ||| ||||||||||||    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtgagtgctagagag 43026321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 13856506 - 13856578
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||||||||||||||||  ||| |||||||||| |||| |||||  |||| ||||||||||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgttgagaagtggatgttactagcattcctc 13856578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 31691625 - 31691692
Alignment:
Q  129 attgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcc 196  Q
    ||||||||| | |||||||||||| |||| || ||||||| || ||||||||||||||||||||||||    
T  31691625 attgatttcgttcaataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcattcc 31691692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 1961444 - 1961402
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaat 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  1961444 agagtaatgctagcaacactctcttttgaacactctctctaat 1961402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 10868094 - 10868021
Alignment:
Q  92 tttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||| ||||||||| ||||   ||||||||||| |||||||||||||| | |||||| |||||||    
T  10868094 tttgaaaattgaatccacacaaaatggtgaaacatacattgagttcatccaataaaaaaataagtgatagagag 10868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 25915190 - 25915088
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtggg---tctacactttgaaaattgaacccacacaaagtggtaggacatacattga 133  Q
    ||||||||| ||| |||||||||| | | ||| | |||||| |||||    |||||||||||||||| ||||||| | ||||| ||||||||||||||||    
T  25915190 aacactctccctagtactcactcttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagtagtaggacatacattga 25915091  T
Q  134 ttt 136  Q
    |||    
T  25915090 ttt 25915088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 37489437 - 37489505
Alignment:
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    |||||||||||| |||||||||||||||||| | ||| || |||| ||| |||| ||||||||||||||    
T  37489437 gtaggacatacaatgatttcatccaataaaaaaataaatgttagaaagaatattcaaaagtgagtgttg 37489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 5095759 - 5095826
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgt 81  Q
    |||||||| ||||||| ||| | ||||  |||||||||||||||||||| | ||||||||||||||||    
T  5095759 aatgctaggaacactcacttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 45218614 - 45218698
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||| |||||  ||||||||||||||||||||||||  |||| ||||||| ||||  ||||| ||||||  ||||||||||||    
T  45218614 aaagtggtgggacacgcattgatttcatccaataaaagagcgagtgttagagagtgtat--aaaagagagtgtccctagcattcctc 45218698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 33417791 - 33417678
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| ||||  |||||||| |||||||| | |||| ||||||||||| | ||||||   || ||||| |||||||||| | |||||  ||||||    
T  33417791 ctacactttggaaatgaaacccacataaagtggtggaacatgcattgatttcacctaataaagatgtgagtgc-agagagagtactcaaaagaaagtgtt 33417693  T
Q  186 gctagcattcctcgt 200  Q
    | |||||||||||||    
T  33417692 gttagcattcctcgt 33417678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 34952497 - 34952455
Alignment:
Q  159 tagagagagtattgaaaagtgagtgttgctagcattcctcgtt 201  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  34952497 tagagagagtgttaaaaagtgagtgttgctagcattcctcgtt 34952455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 45524897 - 45525059
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacacaaagtggtaggacatacattgatt 135  Q
    ||||||||||| || ||||||| | | | ||| ||||||||| |||||| | |||||||| |||| |   |||| ||||||||| || ||||||||||||    
T  45524897 aacactctctccaacactcactttttaattggcttaaatcatggtgggtttcacactttggaaatgggttccactcaaagtggtgggtcatacattgatt 45524996  T
Q  136 tcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | ||||||||| | | | |||| |  ||||||| |||||||| ||||||  || |||||||||    
T  45524997 ttatccaataagaaaatgagtgttgaagagagtgttgaaaagagagtgtccctggcattcctc 45525059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 12212199 - 12212126
Alignment:
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagc 191  Q
    |||||||  |||||||||||| |||| |||||||| | || |||||||| | |||||||| |||||||||||||    
T  12212199 gtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 12456627 - 12456554
Alignment:
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagc 191  Q
    |||||||  |||||||||||| |||| |||||||| | || |||||||| | |||||||| |||||||||||||    
T  12456627 gtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 13407389 - 13407316
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    |||||||||| | ||||| | ||| | |||| |||||||||| || ||||| ||||||||||||||||||||||    
T  13407389 acattgatttaacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcattcctcgt 13407316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 28211961 - 28212038
Alignment:
Q  90 actttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    ||||| ||||| ||||||||| ||| ||||  |||||| |||||||||| ||||||||  ||| ||||||||||||||    
T  28211961 actttaaaaatggaacccacataaaatggtgagacatatattgatttcacccaataaataagtgagtgctagagagag 28212038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 28485426 - 28485523
Alignment:
Q  61 ctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    |||| |||||||||| | ||||||||| |||||||| |||| |   ||||  |||||||| ||||||||||| |||||||||||||| ||| ||||||    
T  28485426 ctcattggtttaaattaatgtgggtctcacactttggaaatgggttccacttaaagtggtgggacatacattaatttcatccaataagagaataagtg 28485523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 39023509 - 39023428
Alignment:
Q  116 tggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    |||| |||||||||||||||||||||||||||  | | |||||||||||||   || ||| |||||||||| || |||||||    
T  39023509 tggtgggacatacattgatttcatccaataaataaatgagtgctagagagaccgttaaaacgtgagtgttgttaacattcct 39023428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 3099693 - 3099777
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    |||||||||| |||||| | ||| |||||| ||||  ||| |||||||| |||| | ||||||||||||| |||| |||||||||    
T  3099693 tggtttaaattattgtgagactatactttggaaatataactcacacaaaatggtggaacatacattgattccatctaataaaaga 3099777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 11574214 - 11574162
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct 62  Q
    |||||||| ||| ||||||||||| |||||||||||| ||| |||||||||||    
T  11574214 gagtaatgttaggaacactctcttttgaacactctctttaacactcactctct 11574162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 8671129 - 8671086
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcact 58  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  8671129 atgctagcaacattctcttttgaacgctctctctaatactcact 8671086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 34303504 - 34303465
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  34303504 tacattgatttcacccaataaaagagttagtgctagagag 34303465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 1205941 - 1206007
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    |||||||||||||  |||||||||||| ||||||| ||||||| || ||||  ||||||||| ||||    
T  1205941 tacattgatttcactcaataaaagagtgagtgctaaagagagtgttcaaaatagagtgttgcaagca 1206007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 5095829 - 5095882
Alignment:
Q  145 aaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| | || ||||| ||||||||| |||||||||| ||||||||    
T  5095829 aaaagagtaagtgttcgaaagagtgttgaaaagtaagtgttgctaacattcctc 5095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 6891525 - 6891566
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaa 50  Q
    |||||||||||| ||||||||| |||| ||||||||||||||    
T  6891525 agagtaatgctaacaacactcttttattaacactctctctaa 6891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 29011137 - 29011080
Alignment:
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||||||||||||||||||||  ||||||||| ||| ||| | |||| ||||||||||    
T  29011137 caaagtggtaggacatacattagtttcatccattaagagaatgagtgttagagagagt 29011080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 31711730 - 31711620
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtg-tt 185  Q
    ||||||||  |||| |||| ||||||||||| |  ||||| |||  ||| |||| ||||||||||| ||||||||| |||  ||| ||||||||||| ||    
T  31711730 tacactttagaaatagaactcacacaaagtgatgagacatgcatgaattccatcaaataaaagagtgagtgctagaaaga--atttaaaagtgagtgttt 31711633  T
Q  186 gctagcattcctc 198  Q
    | |||||||||||    
T  31711632 gatagcattcctc 31711620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 38091537 - 38091468
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcat 78  Q
    |||| ||||||||||||| |||||| | ||||||||||| || ||||||| ||| | ||| |||||||||    
T  38091537 agaggaatgctagcaacattctcttttcaacactctctccaacactcactttctaattggcttaaatcat 38091468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 34303509 - 34303561
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttca 138  Q
    ||||||||||||||| ||| ||||| | ||||||  |||||||||||||||||    
T  34303509 ctacactttgaaaatcgaagccacatagagtggtgagacatacattgatttca 34303561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 2e-63; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 28490727 - 28490905
Alignment:
Q  20 agcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggt 119  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||  ||||||||||||    
T  28490727 agcaacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggt 28490826  T
Q  120 aggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     |||||||| ||||||||||||||||||| ||| | ||||||||||||| ||||||||||| |||||||||||||||||    
T  28490827 gggacatactttgatttcatccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcattcctc 28490905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 34368546 - 34368355
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||||| ||| ||||||||||   || |||||||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  34368546 agaggaatgctagcaacactctcttttgagcactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaaccca 34368447  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||||||||||| | |||||||||| ||| ||||||| ||||||| |||| |||||| ||| || |||| | |||||||||||||||||||||    
T  34368446 cacaaagtggtggaacatacattggttttatccaatgaaagagtgagtgttagagaaagtgttcaaaaataagtgttgctagcattcctcgt 34368355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 41105564 - 41105711
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||||| ||||||| | ||||||||||||||||||||    
T  41105564 agagtaatgcgagcaacactctcttttgagcactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaaccca 41105663  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagt 156  Q
    |||||||| || |||||| | |||||||||||||||||||||||||||    
T  41105664 cacaaagtagtgggacatcccttgatttcatccaataaaagagtaagt 41105711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 10141998 - 10142154
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||| ||||||||||| | || ||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  10141998 aacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattt 10142097  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
     ||||||||||||||| ||||||  | ||||| ||||||| ||||||||||||||||||    
T  10142098 tatccaataaaagagtgagtgct--atagagtgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 5413730 - 5413874
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctc---taatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccc 107  Q
    |||||||| |||||||||||||| ||||||||||||    ||||||||||| | | | |||||||||||||| ||||||||||||||| |||||||||||    
T  5413730 agtaatgcaagcaacactctcttttgaacactctctactataatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaaccc 5413829  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  5413830 acacaaagtggtgggacatacattgatttcatccaataaaagagt 5413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 30325869 - 30326054
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| || ||||||||||| | || |||| |     
T  30325869 agagtagtgctagca-cactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggagatagaactcg 30325967  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || ||||||||  ||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||||||||||||    
T  30325968 cataaagtggtgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 30326054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 37455538 - 37455346
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctc----tctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaa 104  Q
    ||||||||||||||||||||||||| ||||||| |||    ||||||||||||||||| | |||||||| | |||||| |||||||||||||||||||||    
T  37455538 agagtaatgctagcaacactctcttttgaacaccctccctctctaatactcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaa 37455440  T
Q  105 cccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||| |||| | |||||||||||||| ||| |||||| ||||  |||||||||||||| || |||| |||||||| | || |||||||    
T  37455439 cccccacaaaatggtggaacatacattgattttatcgaataaatgagtgtgtgctagagagagtgttaaaaaatgagtgttacaagtattcctc 37455346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 17537124 - 17537285
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||| ||||||| ||| ||||||||| | |||||||||||||| ||| ||||||||||||||||| |||| ||| ||| |||| ||||||||||||||||    
T  17537124 aacaatctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgattt 17537223  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     ||| ||||||||||| |||| |||||||||| ||||||||||||| ||| || ||||||||    
T  17537224 gatcaaataaaagagtgagtgatagagagagtgttgaaaagtgagtattgttatcattcctc 17537285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 42224584 - 42224774
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| |||  |||||||| |  ||||||||| | | ||| | |||||| ||| || | ||||||||| |||| ||||||    
T  42224584 agaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaaccc 42224683  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  42224684 acataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 42224774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 28223783 - 28223955
Alignment:
Q  22 caacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtag 121  Q
    |||||| ||||| ||||||  |||||||||||||||||| | | |||||||||||||| |||||||| |||||||||||||| |||||||||| | |  |    
T  28223783 caacaccctcttttgaacatcctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaaattggtg 28223882  T
Q  122 gacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
     ||||||| | ||||||| |||||||||| |||||| || ||  ||| |||||||||||||||||||||||||    
T  28223883 aacatacaataatttcattcaataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttgctagcatt 28223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 34384687 - 34384863
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    ||||||| ||| | ||||||||| |||||||||||| ||||||||||||| | |  ||| |||||||||||| ||||| | |||||||||||||| ||||    
T  34384687 agtaatggtagtagcactctcttttgaacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcaca 34384786  T
Q  111 caaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgc 187  Q
    |||| | || |||||||||||||||||| ||||||||||| | |||| || ||| |||||| ||||||||| |||||    
T  34384787 caaaatagtgggacatacattgatttcacccaataaaagaatgagtgttaaagaaagtattaaaaagtgagcgttgc 34384863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 28611772 - 28611961
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||||| ||| |||||||||||| ||  ||||| | | || |||||||||||||| ||||||||||| ||||| |||| ||    
T  28611772 agagaaatgctagcaacactctcttttgagcactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactca 28611871  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     |||||||| | ||||||||| || ||  ||||||| ||||||| | || ||||||||||  | |||||||||||||| |||||||||||    
T  28611872 tacaaagtgatgggacatacactggttatatccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgttgttagcattcctc 28611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 25710494 - 25710625
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||| ||||| ||| ||||| | |||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||||||||||    
T  25710494 aacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgattt 25710593  T
Q  137 catccaataaaagagtaagtgctagagagagt 168  Q
    ||  |||||||||||| |||| || |||||||    
T  25710594 cacacaataaaagagtgagtgataaagagagt 25710625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 28434816 - 28434969
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||||||||| |||||| | ||    |||||||||||||| | ||| | ||||||||||||||||||||||| ||||||||||||||||| |    
T  28434816 agagtaatgctagcaacattctcttttaaa----ctctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaattgaaccaa 28434911  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    |||  |||||| ||||||| |||||||| ||||||||||||| | |||| ||||||||||    
T  28434912 cac--agtggtgggacatatattgattttatccaataaaagaattagtgttagagagagt 28434969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 41330390 - 41330530
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||||||||| ||  |||||| |||| |||||||   | ||| | ||||||||||||||||| ||||||||||||||||||||||| ||    
T  41330390 gagtaatgctagcaacactctttt--gaacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaattgaacctac 41330487  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||| | ||||||||||| |||||||| |||||||||||    
T  41330488 acaaagtgatgggacatacattaatttcatctaataaaagagt 41330530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 27592446 - 27592632
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||| |||||||||||| |||| ||||||||   ||| |||||||| | |||||||||||||||  | ||||||||||| |||| |||| |     
T  27592446 agagtagtgctatcaacactctcttttgaatactctctcctgtacccactctcttattggtttaaatcattgcagatctacactttggaaatagaactcg 27592545  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || ||||||||  ||||||||||||||||||||||||||| ||| ||||||| ||||||| |  ||||| ||||||| |||| ||||    
T  27592546 cataaagtggtgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagcgagtgttactagaattc 27592632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 39246750 - 39246605
Alignment:
Q  53 ctcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||||| | |||||||||  ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||| | |||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagt 39246651  T
Q  153 aagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
     | || |||||||  |  | |||||||| |||||||||||||||||    
T  39246650 gattgttagagaggatgctcaaaagtgattgttgctagcattcctc 39246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 1923546 - 1923731
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||||||| || ||||||||| || ||||||   ||||||||||||| | ||| | ||||||||||||||||    ||||||||| |||||||||| ||    
T  1923546 agagtaatggtaacaacactcttttttgaacatcatctctaatactcattatcttattggtttaaatcattgtaaaactacactttaaaaattgaactca 1923645  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||||  ||||||||||  || |||| ||||||| || ||||| |||  ||||||||||||||||| ||||||| |||||    
T  1923646 cacaaagtggtgtgacatacattctttgcatctaataaaaaagaaagtggtaggtagagtattgaaaagtgaatgttgctggcatt 1923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 40971453 - 40971636
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| |||||||||| ||||| ||||||| | | | ||| | |||||| |||  | | ||||||||| ||||  |||  ||| |||    
T  40971453 tgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgtaagacctacactttggaaatgaaacttacataaa 40971552  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| ||||||||||||||||||  |||||||||||| |||||||||||||||  | ||||| |||||||| |||||||||||    
T  40971553 gtggtgggacatacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctc 40971636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 43405551 - 43405390
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    ||||||| |||| ||| ||||||||| | || ||||||||||||||||||||||||||| |||| ||||  | ||||||||||  |||||||||||||||    
T  43405551 aacactccctctgatattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgattt 43405452  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||||||| ||||  | |||| || || |||| ||||| ||  |||||||||||    
T  43405451 cattcaataaaagagtgagtgacaaagagcgtgttaaaaattgagtattattagcattcctc 43405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 195
Target Start/End: Original strand, 28090251 - 28090407
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||| | ||||| ||||||| | | |||||||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||||  ||||||||    
T  28090251 aacactctatgtaatattcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgattt 28090350  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||  |||| || ||||||||  | ||||||| ||||||| | |||||||||| |||||    
T  28090351 catataatataatagtaagtg--atagagagtgttgaaaaataagtgttgctaacattc 28090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 25630936 - 25630808
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||| | || ||| ||||||| |||| ||  ||||||| ||||| || || ||||    
T  25630936 tggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagtaaatgttaaagag 25630837  T
Q  166 agtattgaaaagtgagtgttgctagcatt 194  Q
    ||| ||||||||| ||| |||||||||||    
T  25630836 agtgttgaaaagtaagtattgctagcatt 25630808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 10950238 - 10950083
Alignment:
Q  43 ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatcca 142  Q
    |||||||||| ||| ||||| | | |||||||||||| || ||||| ||||||||||| ||| ||| ||||| |||| ||||||||||||||||||| ||    
T  10950238 ctctctaatattcattctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattca 10950139  T
Q  143 ataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || ||||||||||||  | ||||||| ||| ||| | ||||  | |||||||||||    
T  10950138 atgaaagagtaagtgagaaagagagtgttggaaaataagtgcggttagcattcctc 10950083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 14553665 - 14553573
Alignment:
Q  42 tctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgat 134  Q
    |||||||||||||||||||||   |||||||| | |||||||||||||||||| ||||||||||| ||  ||| |||||||||||||||||||    
T  14553665 tctctctaatactcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaaccaacgtaaaatggtaggacatacattgat 14553573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 36337881 - 36338023
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcac---tctctcagtggtttaaatcattgtgggtctacactttgaaaattgaac 105  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||| |     | | | | |||||||||||||||||||||||||||||| |||||||||    
T  36337881 agagtaatgctatcaacactatcttttgaacactctctctaatacacttattttttttattggtttaaatcattgtgggtctacactttggaaattgaac 36337980  T
Q  106 ccacacaaagtggtaggacatacattgatttcatccaataaaa 148  Q
      ||||||| |  | ||||||||||| |||||||| |||||||    
T  36337981 atacacaaaattatgggacatacattaatttcatcaaataaaa 36338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 4714935 - 4714796
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||||||||||||| |||||| |||||||||||    |||| | | |||| ||||||||||||  |||||| ||||||||| |||||||    
T  4714935 agagtagtgctagcaacactctcttttgaacattctctctaatatgttctcttttattggtataaatcattgtgtatctacattttgaaaatagaaccca 4714836  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaa 148  Q
    |||||| || | ||||| ||| | |||| |||||||||||    
T  4714835 cacaaaatgatgggacacacaataatttaatccaataaaa 4714796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 28155769 - 28155881
Alignment:
Q  84 gtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtg 183  Q
    |||||||||||||||||| |||||| | ||| |||| | ||||||||||||||||| |||||||||||||||||||  ||| |||||| ||||  |||||    
T  28155769 gtctacactttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagtaagtgct--agaaagtattaaaaaaagagtg 28155866  T
Q  184 ttgctagcattcctc 198  Q
    ||| |||| ||||||    
T  28155867 ttgttagccttcctc 28155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 25919340 - 25919266
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatc 140  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||  |||||| ||||||||||||    
T  25919340 tggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgatttcatc 25919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 4959387 - 4959275
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||||||||  |||||||| ||| || |  ||||||||||||||||| |||||||||||||  ||  ||||||||||  | ||||| |||||||    
T  4959387 ctacactttgaaaatgtaacccacataaaatgatgagacatacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgtt 4959288  T
Q  186 gctagcattcctc 198  Q
    |||||||||||||    
T  4959287 gctagcattcctc 4959275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 32401302 - 32401114
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggt-ctacactttgaaaattgaacccac 109  Q
    |||| ||||||||||||  |||| |||||||||||||||||||||||||| |   ||  |||||| | ||||| | ||||  ||| ||||| ||||||||    
T  32401302 agtagtgctagcaacaccttcttttgaacactctctctaatactcactctttagttgacttaaattaatgtggatcctacgtttttaaaatggaacccac 32401203  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    | |||||||| | | ||||||| ||||||  |||||| |||||||||| | |||||||| |||||||  |||||||  | |||||||||    
T  32401202 ataaagtggtggaatatacattaatttcactcaataagagagtaagtgtttgagagagtgttgaaaatagagtgttatttgcattcctc 32401114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 32309562 - 32309475
Alignment:
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||||||| ||||||||||| |||| ||||||||| ||||| ||||||||||||| | |||||||| ||||||  ||||||||||||||    
T  32309562 aagtggtcggacatacattaattttatccaataagagagtgagtgctagagagaatgttgaaaagagagtgtctctagcattcctcgt 32309475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 17434849 - 17435019
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||| ||||||||||||||| | |||| ||||||||||  ||||||| | | |||||||||||| ||||||||||||||||  |||| |||| || ||||    
T  17434849 aatgttagcaacactctcttttaaaca-tctctctaatgttcactcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaa 17434947  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgc 187  Q
    | | |||| ||||| |||  ||| ||||||||||  ||| |||  || ||||||| ||||||||| ||||||||    
T  17434948 aatagtagaacatatatttgtttaatccaataaa--agtgagtaataaagagagtgttgaaaagtaagtgttgc 17435019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 10666682 - 10666819
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| || |||| ||||||| || | || ||||||| ||| | ||||||||| | |||||||||| | |||| ||||||| ||| ||||| |||||||    
T  10666682 agagtagtgatagctacactctttttttaagactctctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaaccca 10666781  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataa 146  Q
    || |||||||||||| ||||| |||||| ||| |||||    
T  10666782 cataaagtggtaggatatacaatgattttatctaataa 10666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 12076056 - 12076133
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc 86  Q
    |||||| |||||||||||||||||| |||||||| | ||||||||||||||||| | ||| |||||||| ||||||||    
T  12076056 agagtagtgctagcaacactctcttttgaacactttatctaatactcactctctaattggcttaaatcaatgtgggtc 12076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 31885882 - 31885963
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    |||||||||||||||| | ||||||||||||||||||||||  || ||| |||| |||||| ||||| ||||||||||||||    
T  31885882 tggtttaaatcattgtagatctacactttgaaaattgaacctccagaaaatggtgggacatccattgttttcatccaataaa 31885963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 17568700 - 17568856
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| ||||||| |||  || |||||| | | ||| | |||| | ||| || | ||||||||| |||| ||||| ||  |    
T  17568700 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctaccta 17568799  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagta 169  Q
    ||||||| ||||||| ||||||||||  |||||||||||| |||||||| |||||||    
T  17568800 aagtggtgggacataaattgatttcactcaataaaagagtgagtgctagggagagta 17568856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 42224657 - 42224585
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||  | ||||| ||||||||||||||||||||    
T  42224657 tacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctc 42224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 13456236 - 13456315
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||||| |||||||||| |||  |||||||    
T  13456236 ctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaagagtgagtaatagagag 13456315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 32050489 - 32050334
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggt-ctacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| || ||||||||  ||||||| | | | ||| | |||||| |||  || | ||||||||||||| ||||||||| |    
T  32050489 aatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccacactttgaaaatggaacccacata 32050390  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||| |  |||||| ||| |||||| ||||||||||| | | |||||||||||||    
T  32050389 aagtgatgagacatatattaatttcacccaataaaagaatgaatgctagagagagt 32050334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 17568768 - 17568695
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
    |||||| ||||||||||||||||||||  ||||||| ||||||  | ||||| |||||||||||||||||||||    
T  17568768 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctcg 17568695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 43541956 - 43541871
Alignment:
Q  90 actttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaa 175  Q
    |||||||||||||||| ||||||||||| |  ||||||||||||||| || ||||||||||| ||||  || ||||||| ||||||    
T  43541956 actttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagaggaagtattaaagagagtgttgaaa 43541871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 24915163 - 24915099
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagag 151  Q
    |||||||||||||| ||||||||| |||||||| ||||||| |||||||||| | ||||||||||    
T  24915163 tacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaagag 24915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 24990994 - 24990930
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagag 151  Q
    |||||||||||||| ||||| ||| |||||||| ||||||| |||||||||| ||||||||||||    
T  24990994 tacactttgaaaatggaacctacataaagtggtgggacatatattgatttcacccaataaaagag 24990930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 32050418 - 32050490
Alignment:
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||| |  | ||||| |||||||||||||||||    
T  32050418 acatacattgatttcacccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 32050490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 6264061 - 6263881
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgt-gggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| | | |||||| ||||  ||||||||| | ||||| | |||||| |||  | || |||||||| || | |||||  || |||    
T  6264061 tgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgtaagatcaacactttggaactggaacc--cataaa 6263964  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||||| ||||||| |||||||| | |||||||| |||| |||| ||||||||||  | ||||| ||||||| ||| |||||||    
T  6263963 gtggtgggacatatattgattttacccaataaaggagtgagtgatagagagagtgctcaaaagagagtgttactaacattcct 6263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 26072285 - 26072106
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| ||| || ||||||||  ||||||||| | | ||| | ||| || |||||| | ||||||||| ||||  |  ||||| |    
T  26072285 aatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgtgggacctacactttggaaatgaattccacata 26072186  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagca 192  Q
    |||||||  ||||||||||||||||| |||| |||||| | |||  |||| |||||  | ||||| |||||||| |||||    
T  26072185 aagtggtgagacatacattgatttcacccaaaaaaagaatgagtattagaaagagtgctcaaaagagagtgttgttagca 26072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 26072218 - 26072289
Alignment:
Q  127 acattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| ||||| ||||||||||||| ||||||||||||| |  | ||||| ||||||||||||||||||||    
T  26072218 acattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctc 26072289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 1649633 - 1649547
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||  |||||||| |||||||||||||| | ||| |||| |||||||||| |||||||| ||||||  ||| ||||||||    
T  1649633 aaagtggtagagcatacattaatttcatccaataagatagtgagtgttagagagagtgttgaaaagagagtgtccctaacattcctc 1649547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 4959391 - 4959464
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||  ||||||||||||| |||||||||||||||  | ||||| ||||||| |||||| |||||    
T  4959391 atacattgatttcccccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcctc 4959464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 17700256 - 17700166
Alignment:
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    |||||||||||| ||  |||||||| || |||||||||||||||| || | |  | |||||||| |||||||||||||||||| |||||||||    
T  17700256 acacaaagtggtggggtatacattggttccatccaataaaagagtgaggggt--atagagtattcaaaagtgagtgttgctagtattcctcgt 17700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 6263995 - 6264067
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||||  | ||||| |||||||||||||| |||||    
T  6263995 tacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagcactcctc 6264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 10253164 - 10253232
Alignment:
Q  97 aaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||| |||| |||| |||||||| ||||||||||| ||||||||||||| |||||| |||| |||||||    
T  10253164 aaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtgagtgttagagag 10253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 4959274 - 4959325
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  4959274 agaggaatgctagcaacactctcttttgagcactctctctaatacccactct 4959325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 8912618 - 8912511
Alignment:
Q  87 tacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    ||||||||| ||||  |||||||| |||||||  ||||||| ||| |||| | | ||||||||||| ||||||||| | ||| || ||||| ||| ||||    
T  8912618 tacactttggaaatgaaacccacagaaagtggagggacatatattaattttaccaaataaaagagtgagtgctagaaaaagtgtttaaaagagagcgttg 8912519  T
Q  187 ctagcatt 194  Q
    ||||||||    
T  8912518 ctagcatt 8912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 25564033 - 25564080
Alignment:
Q  102 gaacccacacaaagtggtaggacatacattgatttcatccaataaaag 149  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||    
T  25564033 gaacccacacaaagtggtggaacatacatttatttcatccaataaaag 25564080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 2525721 - 2525583
Alignment:
Q  48 taatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    ||||| ||||||||| | |  ||||||||||| ||  | |||||||||||||  |||  |||||||||||||   | |||||||||||||||||||||||    
T  2525721 taatattcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtggtgatagatacattgatttcatccaataaa 2525622  T
Q  148 agagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    | |   |||| || ||||||| || |||| |||||||||    
T  2525621 aaaacgagtgttaaagagagtgttaaaaaatgagtgttg 2525583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 34480005 - 34480079
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaa 143  Q
    ||||||| ||||||||||| |||||| |||||||||  |||||||| ||||  || ||| |||||||||||||||    
T  34480005 tttaaattattgtgggtctgcactttaaaaattgaattcacacaaaatggtgagatatatattgatttcatccaa 34480079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 40971519 - 40971445
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
    ||||||||||| | ||||||||| ||| |||| |||| ||||| || ||||| |||||||||||||| |||||||    
T  40971519 tacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagcactcctcgt 40971445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 5465656 - 5465725
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtcta 88  Q
    |||||||||||||   |||||||| | ||||||| ||||||||| | |||||||||||||| ||||||||    
T  5465656 tagcaacactctccattgaacactttttctaatattcactctcttattggtttaaatcattatgggtcta 5465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 24915169 - 24915239
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||||| |||||||||||| |  |  ||||| |||||||||||| |||||||    
T  24915169 tacattgatttcacccaataaaagagtgagtgctagagagtgctt--aaaagagagtgttgctagtattcctc 24915239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 24991000 - 24991070
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||||| |||||||||||| |  |  ||||| |||||||||||| |||||||    
T  24991000 tacattgatttcacccaataaaagagtgagtgctagagagtgctt--aaaagagagtgttgctagtattcctc 24991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 25002014 - 25002091
Alignment:
Q  24 acactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaat 100  Q
    |||||||||| | ||||||||||| || ||||||| ||| | ||||||||||||| |||||||| |||||||| ||||    
T  25002014 acactctcttttcaacactctctccaacactcactttctaattggtttaaatcatagtgggtctcacactttggaaat 25002091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 13456239 - 13456170
Alignment:
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgcta 189  Q
    ||||||| ||||||||||||| | ||||||||||| ||||||||  |||||| | ||||| |||||||||||    
T  13456239 gtaggacctacattgatttcacctaataaaagagtgagtgctag--agagtactcaaaagagagtgttgcta 13456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 42224770 - 42224724
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||    
T  42224770 aatgctagcaacactctcttttgagcactctctctagcactcactct 42224724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 4427369 - 4427336
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaatt 101  Q
    ||||||||||||||| ||||||||||||||||||    
T  4427369 gtttaaatcattgtgagtctacactttgaaaatt 4427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 4877752 - 4877898
Alignment:
Q  18 ctagcaacactctcttatgaacact----ctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    |||||||||||||||| |||| |||    || ||||| | ||||||||| | || |||||||||  ||| || || || ||||||||| || ||||  ||    
T  4877752 ctagcaacactctcttttgaatacttattctttctaaaaatcactctcttattgatttaaatcaacgtgagtttatacgttgaaaattaaaaccacgtaa 4877851  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgcta 160  Q
    | || |  ||| ||||||||||||||||||||||| | |||||||||    
T  4877852 aatgatgagacgtacattgatttcatccaataaaaaaataagtgcta 4877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 10300088 - 10300052
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctct 46  Q
    |||||||||||||||||||||||| | ||||||||||    
T  10300088 gagtaatgctagcaacactctcttttcaacactctct 10300052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 5e-58; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 6133623 - 6133807
Alignment:
Q  13 taatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 112  Q
    ||||| ||||||||||||||| ||||||  |||||||||||||||||||| | |||||||| ||||||||||| || |||||||||||||||||||||||    
T  6133623 taatgttagcaacactctcttttgaacatcctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacaca 6133721  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |  |||| ||||||| ||||||||||||||||||||| || ||||||||||||| | |||||||||||||||||||||||||||||    
T  6133722 atatggtgggacatatattgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcctc 6133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 10659764 - 10659948
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||||| | |||| |||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||    
T  10659764 gagtaatgctagcaacattttcttttgaacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctac 10659862  T
Q  110 acaaagtggtaggacatacattgatttcatccaat-aaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||||| |||||| |||||||||||||| || |||| ||| |||| ||||||||||||||||||||||||||||||| ||||    
T  10659863 acaaagtggtcggacatccattgatttcatcccataaaaaaagtgagtgttagagagagtattgaaaagtgagtgttgctaacatt 10659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 26980262 - 26980447
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||| | || ||||||||||||||| | || | |||||||||||||| ||||||||    
T  26980262 atgctagcaacactctcttttcaacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaa 26980361  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgt 200  Q
     |||| |||||||||||||||||||||||||| ||||| |||  |||||||||| ||||||||||||||||| |||||||||||||    
T  26980362 atggtgggacatacattgatttcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcattcctcgt 26980447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 11987811 - 11987623
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||||||||||||||||||||| | |||||||| |||||||  |||||||| | |||||||||||||||||||||||||||||||||||||||||| |    
T  11987811 gagtaatgctagcaacactctcttttaaacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgc 11987712  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || ||||||| | ||||||||| ||||||||||||||| || ||| || | |||||||| ||||||||||||||||| ||| |||||||    
T  11987711 actaagtggtggaacatacattaatttcatccaataaatgaataaatgttggagagagtgttgaaaagtgagtgttgttagtattcctc 11987623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 8899199 - 8899015
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||| |||||||  ||||||||||||||||||||||||    
T  8899199 gagtaatgctagcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccac 8899100  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| ||| |||||||| || |||||||| ||| ||| || ||||| ||||| || | |||||||||||||||||||| ||||    
T  8899099 acaaaggggtgggacatacctttatttcatctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgttgctaacatt 8899015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 41958241 - 41958082
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  41958241 aacactctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgattt 41958142  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||| |||| ||||||   |||||| |||||||||||||||| ||||||||||||    
T  41958141 catccaataaatgagtgagtgct--tgagagtgttgaaaagtgagtgttactagcattcctc 41958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 19101595 - 19101781
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||||||  |||||||| |||||||||||||||||||||||| ||| | |||||||||||||||  | |||||||||||||||| |||| |     
T  19101595 agagtagtgctagcactactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcg 19101694  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||||||||||||    
T  19101695 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 19101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 28218040 - 28218231
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctc--tctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacc 106  Q
    ||||||||||||||||||||||||| ||||||||| |  ||||||||||||| ||| | |  ||||||| | ||||| |||||||||||||||||||| |    
T  28218040 agagtaatgctagcaacactctcttttgaacactcccgctctaatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatc 28218139  T
Q  107 cacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| | ||||| ||||||  ||||||| |||||||||||| | ||||||    
T  28218140 cacacaaagtggtgagacatacattgatttcatccaataaaagagtgaatgctaaagagagggttgaaaaatgagtgttgctaaccttcctc 28218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 2225409 - 2225223
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    |||||| ||||| ||||||||||| ||||||| || | | ||||||||| ||| | |||||||||||| ||| ||||||||||||| |||  ||||||||    
T  2225409 gagtaaggctagtaacactctcttttgaacacgctttgtgatactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccac 2225310  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||||||  ||||| ||||||| |||||||| ||||||||||||    
T  2225309 acaaagtggtgggacatacattgatttcatccaataaaagagtgggtgctag--agagtgttgaaaattgagtgttactagcattcctc 2225223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 8741217 - 8741405
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    ||||| || |||||||||||||||| |||||| | ||||||||||||||||||| | | ||||||||||||||| || || |||||||||||||||||||    
T  8741217 agagttatactagcaacactctcttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaaccca 8741316  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgct--agagagagtattgaaaagtgagtgttgctagcattc 195  Q
    |||||| | ||  ||||||||||||||||||||||||||| ||| |   ||  ||||||||| ||||||||||||||||||||||||||    
T  8741317 cacaaattagtgagacatacattgatttcatccaataaaaaagtgaccactaaagagagagttttgaaaagtgagtgttgctagcattc 8741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 25543511 - 25543337
Alignment:
Q  23 aacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtagg 122  Q
    ||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||| | || ||| |||  |||  | || |||||||||||| ||    
T  25543511 aacactctcttttgaacactctctctaatactcactatcttattggtttaaatcattgtgaggctgcacattgggaatata-cctacacaaagtggtggg 25543413  T
Q  123 acatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  25543412 acatatattgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctc 25543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 30678905 - 30679048
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||||||||||||||| || ||| |||||||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||    
T  30678905 agaggaatgctagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaaccca 30679004  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||||| |||||||||||||||| ||||| | |||||||    
T  30679005 cacaaagtggtgggacatacattgattttatccattgaaagagt 30679048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 41948140 - 41948283
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| ||||||||||| | |||||| |||||||||||||||| ||||||||||| | || ||||||||||||||| | |||||||||||||||||||| |    
T  41948140 agagcaatgctagcaatattctcttttgaacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaa 41948239  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||||||| | |||||||||||| |||||||||||||||    
T  41948240 cacaaagtggtagaatatacattgattttatccaataaaagagt 41948283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 32211788 - 32211937
Alignment:
Q  19 tagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtgg 118  Q
    ||||||||||||||| | |||||| ||| ||||  ||||||||| | |||||||||||||||||||||||||| || |||||||||| |||||||||| |    
T  32211788 tagcaacactctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtag 32211887  T
Q  119 taggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    | |||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  32211888 ttggacatacattgatttcatctaataaaagagtgagtgctggagagagt 32211937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 33193219 - 33193098
Alignment:
Q  25 cactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggac 124  Q
    ||||||||| |||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||    
T  33193219 cactctctt-tgaacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcac 33193121  T
Q  125 atacattgatttcatccaataaa 147  Q
    |||||||||||||||||||||||    
T  33193120 atacattgatttcatccaataaa 33193098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 931560 - 931371
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||| |||||||||||||||||  | | |||||| | ||||||| ||||||| | | |||||||||||||||||||| || | |||||||||||||||||    
T  931560 agaggaatgctagcaacactcttcttttaacactttttctaatattcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaaccca 931461  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    || ||| || | |||||||||||| || ||| |||||||||||| |||  |||||| ||  |||||||||||||||||||||||||||||    
T  931460 caaaaaatgatgggacatacattgcttccattcaataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcattcctc 931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 22540550 - 22540368
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| |||||||| ||||||||| |||||||||||| ||||||| |||     | ||||||||||||||| || ||||||||||| |||| |||| |     
T  22540550 agagtagtgctagcaccactctcttttgaacactctctttaatactaactt----attggtttaaatcattgcggatctacactttggaaatagaactcg 22540455  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||||||||||||    
T  22540454 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 22540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 11135920 - 11135736
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaa 113  Q
    ||||||||||||||||||| |||  ||||||||||  ||||||||| | | ||| | |||||| ||| || | ||||||||| |||| ||||||||| ||    
T  11135920 atgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataa 11135821  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  11135820 agtggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 11135736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 3872685 - 3872813
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||  |||||| |||||||| ||  |||| |||||| ||||||||||||    
T  3872685 tggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt-atttaatagaagagtgagtgctagagag 3872783  T
Q  166 agtattgaaaagtgagtgttgctagcattc 195  Q
    ||| ||||||||||||||||||||||||||    
T  3872784 agtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 44272076 - 44271915
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||| ||||||||||| | | | | || ||||||||||||| | |||||||||||||||||||||| ||| ||| |||| | ||||||||||||||    
T  44272076 aacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacatacattgattt 44271977  T
Q  137 catccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| ||||||||||| ||||||| || |||||||  |||||||||||||||||    
T  44271976 cattcaataaaatagtaagtgctaaagagagtgtttaaaagtggatgttgctagcattcctc 44271915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 32848583 - 32848766
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||||| ||| |||| ||||||  ||| ||||| | | ||||| || ||| ||| || | |||||||||||||| ||| ||||| |||    
T  32848583 tgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacactttgaaaatggaatccacataaa 32848682  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||| || ||||| |||||||| |||||||||||    
T  32848683 gtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattcctc 32848766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 11430627 - 11430438
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| ||| |||||||||||  ||||||||| | | ||||  || ||| ||| || | ||||||||| |||| ||||||    
T  11430627 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggtg-aattcaatgtaggacctacactttggaaatggaaccc 11430529  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||  | ||||| |||||||| |||||||||||    
T  11430528 acataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattcctc 11430438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 13114663 - 13114849
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| || ||||||||||||| ||||||| ||||| ||| |||||||| |||||| | |||| |||| |||| ||| ||    
T  13114663 agagtagtgctagcaacactctcttttggacactctctctaacactcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatcc 13114762  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    | | |||||||| ||||||| |||||||| ||| ||||||||||| |||| |||||||||| |  ||||| |||||| |||||||||    
T  13114763 atataaagtggtgggacatatattgattttatctaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 13114849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 41095602 - 41095788
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| |||||||||||||||||||| ||| |||||||||||  |||||||   | | ||| | |||||| ||| || | |||||||||||||| ||||||    
T  41095602 agaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaaccc 41095701  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||| |||| | |||||||||||||||||| |||||||| |||| |||||||||||||||  | ||||| ||||||||||||||||    
T  41095702 acacagagtgatgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 15523392 - 15523210
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||||||  |||||||| |||||||||||||||||||| |||     | ||||||||||||||| || ||||||||||  |||| |||| |     
T  15523392 agagtagtgctagcactactctcttttgaacactctctctaatactaactt----attggtttaaatcattgcggatctacactttagaaatagaactcg 15523297  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||| ||||||||    
T  15523296 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15523210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 15531386 - 15531204
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||| ||||||||  |||||||| |||||||||||||||||||| |||     | ||||||||||||||| || ||||||||||  |||| |||| |     
T  15531386 agagtagtgctagcactactctcttttgaacactctctctaatactaactt----attggtttaaatcattgcggatctacactttagaaatagaactcg 15531291  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||| ||||||||    
T  15531290 cataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15531204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 35337023 - 35336868
Alignment:
Q  32 ttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacatt 131  Q
    |||| |||||||||||||||||||  ||||| | ||||||||||||||||| ||||||| |  |||||||||||||||||||||||||     | |||||    
T  35337023 ttatcaacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggt----gagacatt 35336928  T
Q  132 gatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcat 193  Q
    ||||||||||||||||| | | |||||||||| || | ||||||||||||||||||||||||    
T  35336927 gatttcatccaataaaataatgagtgctagag-ga-tgttgaaaagtgagtgttgctagcat 35336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 37552962 - 37553102
Alignment:
Q  26 actctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggaca 125  Q
    |||||||| |||||||||| |  |||||||||||||| | || ||||||||||||||| ||||||||||||||||  |||||||  |||||| | |||||    
T  37552962 actctcttttgaacactcttt--aatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggaca 37553059  T
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
     ||||| |||||||||||||| | |||||||||||||||||||    
T  37553060 aacattaatttcatccaataagaaagtaagtgctagagagagt 37553102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 33059896 - 33060072
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtg 117  Q
    ||||||| |||||||| |||||||| | |||| ||| |||||||| | ||||||||| ||||||| || |||||||| |||||| |||||||| | ||||    
T  33059896 ctagcaatactctcttttgaacactttttctagtacccactctcttattggtttaaaacattgtgagtgtacactttaaaaattaaacccacagagagtg 33059995  T
Q  118 gtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    || |||||| | || |||||||||||||||||||| | || || |||  |||| ||||||||||| ||||||||||||    
T  33059996 gt-ggacatgctttaatttcatccaataaaagagtgactgttaaagaatgtatagaaaagtgagtattgctagcattc 33060072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 41918104 - 41917995
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    ||||||||||||||| ||| ||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||  | ||||| |||||||    
T  41918104 ctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgtt 41918005  T
Q  186 gctagcattc 195  Q
    ||||||||||    
T  41918004 gctagcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27570406 - 27570234
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    ||||||||||||| |||||| |||||||||||||| | | ||||| ||| | | ||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  27570406 aatgctagcaacattctcttttgaacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaa 27570307  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttg 186  Q
    | |||| |||||||  || |||||| ||||||||||| | ||||  ||||||||| || |||||||| |||||    
T  27570306 attggtgggacatatcttaatttcaaccaataaaagaatgagtgtcagagagagtgttaaaaagtgactgttg 27570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 49730993 - 49730861
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||  ||| ||| ||||||||||| |||| || ||||    
T  49730993 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgttatagag 49730894  T
Q  166 agtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| ||||| | |||| ||||||  ||||||||    
T  49730893 agtgttgaagaatgagcgttgctgtcattcctc 49730861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 15928738 - 15928582
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||| ||||| |||||||||||| ||||||||||||  |||||||||||| | | |||||||||||| |||  |||||||| |||||||| |||| |||    
T  15928738 gagtagtgctaccaacactctcttttgaacactctct--aatactcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcac 15928641  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||| ||||  |||||||||  ||| |||| |||||||||||  ||||||||||||||    
T  15928640 acaaaatggtgagacatacatgaattccatcaaataaaagagtgggtgctagagagagt 15928582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 29673633 - 29673502
Alignment:
Q  37 aacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 136  Q
    |||||||||||||||||||||| | | | |||||||||| ||||| | |||||||||||||||||||| | ||||||| |||| ||||||| ||||||||    
T  29673633 aacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattt 29673534  T
Q  137 catccaataaaagagtaagtgctagagagagt 168  Q
     ||||||||||| | | |||| ||||||||||    
T  29673533 tatccaataaaataatgagtgttagagagagt 29673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 14093999 - 14094184
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||| ||||||||||||||| |||||||||| | ||| ||||||| | | | ||  | |||||| ||| || | ||||||||| |||| ||||||||| |    
T  14093999 aatgttagcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtaggacctacactttggaaatggaacccacata 14094098  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||| |||||||||||||||||| ||||||||| ||| |||||| |||||||| || |||||  | ||| |||||||||||||    
T  14094099 aagtggtgggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtcgctagcattcctc 14094184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 39019752 - 39019572
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct-cagtggtttaaatcattgtgggt-ctacactttgaaaattgaaccc 107  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||||||  | ||| || ||||| ||||||| ||||  |||||||||  |||||    
T  39019752 gagtagtgctagcaacactctcttttgaacactttctctaatactcactctctaaattggcttcaatcaatgtgggtcctacgttttgaaaatgaaaccc 39019653  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||    |||||| |||||||||||||||||| |||||||       |||| | |||||||| |||||||| ||||||||||||||||||||    
T  39019652 ac----agtggtgggacatacattgatttcacccaataa------gagtgtttgagagagtgttgaaaagagagtgttgctagcattcctc 39019572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 46335223 - 46335092
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataa---aagagtaagtgctagagag 165  Q
    |||||||||||||||||||| || ||||||||  ||| |  |||||||||||||| ||| ||||||||||||||||||   |||||| ||||||||| ||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaagaagagtgagtgctagaaag 46335124  T
Q  166 agtattgaaaagtgagtgttgctagcattcct 197  Q
    ||| || |||||||||  ||||||||||||||    
T  46335123 agtgttcaaaagtgaggtttgctagcattcct 46335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 31074863 - 31074717
Alignment:
Q  47 ctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataa 146  Q
    ||||||| |||||||| | |||| ||| |||||||||||||||| ||||||||| ||| | ||| |||||| ||||||||  |||||||||||| |||||    
T  31074863 ctaatacccactctcttattggtctaa-tcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatgtattgatttcatcaaataa 31074765  T
Q  147 aagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||||| || ||| |||||| || |||  ||||||||| |||||||    
T  31074764 aagagtaaatgttagggagagtgttcaaacatgagtgttgatagcatt 31074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 50539251 - 50539162
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    ||||||||||||| | |||||||||  |||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||| ||||    
T  50539251 gtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtg 50539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 13388403 - 13388331
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcctc 13388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 44739227 - 44739115
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgtt 185  Q
    |||||||||| ||||  ||| |||| |||||||| ||||||||||| ||||||  ||| |||||||| ||||||||||||||| || ||||| |||||||    
T  44739227 ctacactttggaaatacaactcacataaagtggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgtt 44739128  T
Q  186 gctagcattcctc 198  Q
    |||| ||||||||    
T  44739127 gctaacattcctc 44739115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 39039470 - 39039537
Alignment:
Q  130 ttgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcct 197  Q
    ||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattcct 39039537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 39974194 - 39974326
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaaccca 108  Q
    |||||||||||| |||||||||||| |||||| ||| ||||||||||||||||| | ||||||||||||||||   ||| |||||      |||||||||    
T  39974194 agagtaatgctaacaacactctcttttgaacattctttctaatactcactctcttattggtttaaatcattgtaaatctgcactt------ttgaaccca 39974287  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaa 147  Q
     ||||| |||| | |||| ||||||||||||| ||||||    
T  39974288 tacaaaatggtggaacatccattgatttcatctaataaa 39974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 15468388 - 15468258
Alignment:
Q  27 ctctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacat 126  Q
    ||||||| |||||||| |||| |||||| ||||| | | |  ||||||| |||||||||||||||| |||||||||||||||||||||||  |  |||||    
T  15468388 ctctcttttgaacactatctcaaatacttactcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacat 15468289  T
Q  127 acattgatttcatccaataaaagagtaagtg 157  Q
    |||||||||  ||  ||||||||||| ||||    
T  15468288 acattgattctatttaataaaagagtgagtg 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 50773104 - 50773294
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||| ||||||||||| |||||||| |||||||||||||||  ||||| ||| | | ||| | |||| | ||| || | || | |||| |||| ||||||    
T  50773104 agagaaatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgtaggacctatattttggaaatggaaccc 50773203  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| |||||||| | ||||| |||||||| ||||||||||||||| |||| ||||||||| | | ||||  ||||||||||| ||| ||||    
T  50773204 acataaagtggtggaacatatattgattttatccaataaaagagtgagtgttagagagagcagtcaaaatagagtgttgctaacatccctc 50773294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 51732456 - 51732290
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||| | || |||||  | ||||||||||||||||| | | |||||||||| ||||||||| || |||||||||||| ||| |||| |||    
T  51732456 atgctagcaacactttttt-tgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaa 51732358  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    || || | | ||||||| |||||||| ||||||| ||| | || ||||||| |  |||||||||||||||    
T  51732357 gtagtggaaaatacattaatttcatcaaataaaaaagtgaatgttagagagcg--ttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 13388335 - 13388483
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacaca 112  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||| | | | ||| | |||||| ||| |  | ||||||||||||||  |||||||| |    
T  13388335 aatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgtagtacctacactttgaaaatgaaacccacata 13388434  T
Q  113 --aagtggtaggacatacattgatttcatccaataaaagagtaagtgct 159  Q
      |||||||  ||||||||||||||||| ||||||||||||| ||||||    
T  13388435 taaagtggtgagacatacattgatttcacccaataaaagagtgagtgct 13388483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 36567059 - 36566925
Alignment:
Q  26 actctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggaca 125  Q
    |||||||| ||||||| |||||||||||||||||| | | |      ||| ||| ||| |||||||||||||||| ||||||| | |||||| |  ||||    
T  36567059 actctcttttgaacacactctctaatactcactctattatt------aataattctggatctacactttgaaaatagaacccaaataaagtgatgagaca 36566966  T
Q  126 tacattgatttcatccaataaaagagtaagtgctagagaga 166  Q
    ||||||||||||||||||||||| |||||||| || |||||    
T  36566965 tacattgatttcatccaataaaatagtaagtgttaaagaga 36566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 33114152 - 33113976
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaa 113  Q
    ||||||||||| | || ||| | |||||||||| ||  ||||||| | | | |||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  33114152 aatgctagcaagattcacttttaaacactctctataggactcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataa 33114053  T
Q  114 agtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctag 190  Q
    | |||| ||||||||| |||||| | | ||||| | ||| |||  || ||| |||||| ||||| |||| |||||||    
T  33114052 aatggtgggacatacaatgatttaaactaataagaaagtgagtattaaagaaagtatttaaaagagagtattgctag 33113976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 45179270 - 45179378
Alignment:
Q  39 cactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttca 138  Q
    |||||||||||||||||| | ||| | |  ||||| | ||||||||| ||||||||||||||||||||| ||||||||| | | |||||||||||||| |    
T  45179270 cactctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgatttta 45179369  T
Q  139 tccaataaa 147  Q
    | |||||||    
T  45179370 ttcaataaa 45179378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 50424859 - 50425019
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaaccc 107  Q
    |||||| |||||||||||||||||| |   |||||||||||| | ||||| | | | ||| |||||||| |||||||| ||||||||| |||| ||||      
T  50424859 agagtagtgctagcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaactt 50424958  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||| |||||||| ||  ||  |||||||| ||||||||||||||| |||| ||||||||||    
T  50424959 acataaagtggtggggtatggattgattttatccaataaaagagtgagtgttagagagagt 50425019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 9165390 - 9165299
Alignment:
Q  107 cacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||  | ||||| |||||| | |||||||||||    
T  9165390 cacataaagtggtaggacatacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattcctc 9165299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 24436540 - 24436650
Alignment:
Q  88 acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgc 187  Q
    ||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||  |||||| ||| ||| ||| ||| | |||| ||||| | ||| |||    
T  24436540 acactttgaaaatagaacccacataaagtggtgggatatacattgatttcatcagataaaaaagtgagtactaaagaaattattcaaaagagggtgctgc 24436639  T
Q  188 tagcattcctc 198  Q
    |||||||||||    
T  24436640 tagcattcctc 24436650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 31866470 - 31866361
Alignment:
Q  40 actctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcat 139  Q
    ||||||| ||||||||||| ||| | | |||||||||||||||| | |||||||| |||||||||||  || ||| | || |||||||||||||||||||    
T  31866470 actctctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacatacattgatttcat 31866372  T
Q  140 ccaataaaaga 150  Q
    |||| ||||||    
T  31866371 ccaacaaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 39499519 - 39499430
Alignment:
Q  70 ttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgcta 160  Q
    |||||||||||||| |||||| |||||||||||||| |||| |||||| || ||||||||||||||| ||| ||| ||||||| |||||||    
T  39499519 ttaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaat-aaagagtgagtgcta 39499430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 18157214 - 18157039
Alignment:
Q  18 ctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaacccacacaaagt 116  Q
    |||||||||||||||| | |||| |||||| ||||||||||  || | |||||||| |||  |||||||| |||||||| ||||     ||||  |||||    
T  18157214 ctagcaacactctcttttcaacattctctcaaatactcacttccttattggtttaa-tcaa-gtgggtctcacactttggaaatgtgttccacttaaagt 18157117  T
Q  117 ggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||| ||||||||||| |||||||||||||||| |||  ||| |||||||||| |||||||| ||||||  ||||||||    
T  18157116 ggtgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatt 18157039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 11135853 - 11135925
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||||||| |||||||||||||||  | ||||| ||||||||||||||| ||||    
T  11135853 tacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcatccctc 11135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 16948523 - 16948603
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctac 89  Q
    |||| |||||||||||||||||||  |||||| | ||||||||||||||||||| | || ||||||||||||||| |||||    
T  16948523 agaggaatgctagcaacactctctgttgaacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 43851114 - 43851218
Alignment:
Q  94 tgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcat 193  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||| |||||||| |||| ||| |||||||| |   | ||||| ||||||||||| |||    
T  43851114 tgaaaatggaacccatataaagtggtgggacatacattgatttcacccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacat 43851213  T
Q  194 tcctc 198  Q
    |||||    
T  43851214 tcctc 43851218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 1093063 - 1093223
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactct----ctcagtggtttaaatcattgtgggtctacactttgaaaattgaa 104  Q
    |||||| || || |||||||||||  |||||||||||| |||||| |||| |    || | | ||||||||||||||||  |||||||||| ||||  ||    
T  1093063 agagtagtgataacaacactctctcttgaacactctctttaatacccactatatatcttattagtttaaatcattgtggaactacactttggaaatataa 1093162  T
Q  105 cccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    | || |||||||||| | |||||||||||||||||| |||||| ||||  |||||| ||||    
T  1093163 ctcatacaaagtggtggaacatacattgatttcatctaataaacgagtgcgtgctaaagag 1093223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 4578632 - 4578752
Alignment:
Q  72 aaatcattgtgggtc-tacactttgaaaattgaaccca-cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagta 169  Q
    |||||| |||||||| ||||||||| |||| | ||||  || |||||||| |||| ||||||||||||| ||||||||||||| |||| |  |||||||     
T  4578632 aaatcaatgtgggtcctacactttggaaatgggaccccgcataaagtggtgggacctacattgatttcacccaataaaagagtgagtgtt--agagagtg 4578729  T
Q  170 ttgaaaagtgagtgttgctagca 192  Q
    |||||||| ||||||||||||||    
T  4578730 ttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 15661063 - 15660931
Alignment:
Q  24 acactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtc-tacactttgaaaattgaacccacacaaagtggtagg 122  Q
    |||||||||| || ||||||||||||| ||||||||| | | ||| |||||||| ||||  || |||| |||| ||||  ||||| || |||||||| ||    
T  15661063 acactctcttttggacactctctctaacactcactctattattgggttaaatcaatgtg--tcatacattttggaaataaaacccgcataaagtggtggg 15660966  T
Q  123 acatacattgatttcatccaataaaagagtaagtg 157  Q
    |||| ||||||||| ||||||||||||||| ||||    
T  15660965 acatgcattgattttatccaataaaagagtgagtg 15660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 24911588 - 24911493
Alignment:
Q  70 ttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||||||| |  |||| |||||| ||||  |||||||| |||||||| |||||||||| ||||||||| ||||||||| | ||||||||||||    
T  24911588 ttaaatcattgcgtatctatactttggaaataaaacccacaaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagagag 24911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 6325864 - 6325993
Alignment:
Q  66 tggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagag 165  Q
    ||||||| |||||||||||| |||||||||||||  |||| |||||||| |||| |||||||||||||||| ||  |||||| |||| | |  |  ||||    
T  6325864 tggtttacatcattgtgggtttacactttgaaaa-agaactcacacaaaatggtgggacatacattgattttatttaataaatgagtgattatt--agag 6325960  T
Q  166 agtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||| || ||||||||| |||||||| |||||||    
T  6325961 agtgttcaaaagtgagcgttgctagtattcctc 6325993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 11430555 - 11430631
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |||||||| |||| ||||||||||||| |||||||||||||||  | ||||| |||||||||||||||||||| ||||    
T  11430555 tacattgaattca-ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctctttat 11430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 12767329 - 12767418
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaac 105  Q
    ||||||||| | |||||| |||| || |||||||||||||||||| | | |||||||||||||| || ||||||||||| ||||| ||||    
T  12767329 tgctagcaaaaatctcttttgaaaaccctctctaatactcactcttttattggtttaaatcattatgagtctacactttaaaaatagaac 12767418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 32848649 - 32848572
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcgttat 203  Q
    |||||||| |||| ||||||||||||||||||||||||| |||  | ||||| |||||||||||||| ||||| ||||    
T  32848649 tacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcagtcctctttat 32848572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 15906579 - 15906412
Alignment:
Q  26 actctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggaca 125  Q
    |||||||| | |||| | ||||||||||||| ||  | | || |||||||||||||   |||||| |||| |||||||   ||||||||||| | |||||    
T  15906579 actctctttttaacattatctctaatactcattcgtttattgatttaaatcattgtaaatctacattttgtaaattgagttcacacaaagtgat-ggaca 15906481  T
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    ||||||||||| || |||||||| | ||||| ||||||| ||| || |||| ||||||| | |||||||    
T  15906480 tacattgattttatgcaataaaatattaagtactagagaaagtgttaaaaattgagtgtcgttagcatt 15906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 37525656 - 37525572
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||||||||||||| | |||| ||||||||||||||||||||| ||| |||| | |||||||| | ||| ||||||| |||||||    
T  37525656 gtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagt 37525572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 41095675 - 41095603
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||||||| ||||||||  ||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  41095675 tacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 41095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 28110049 - 28109899
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtggg-tctacactttgaaaattgaacccacaca 112  Q
    |||| ||| ||||||||||| | |  ||| ||||||||||||||| | | | ||| | |||||||| | || |||||||||||||| | ||||||||| |    
T  28110049 aatgttaggaacactctcttttaagtactttctctaatactcacttttttattggatgaaatcattctaggatctacactttgaaa-tggaacccacata 28109951  T
Q  113 aagtggtaggacatacattgatttcatccaataaaagagtaagtgctagaga 164  Q
    || |||| | |||| ||||||||||| ||||||||| ||| |||||||||||    
T  28109950 aaatggtggaacatgcattgatttcacccaataaaaaagtgagtgctagaga 28109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 21466681 - 21466751
Alignment:
Q  125 atacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattc 195  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||| |  |||||||| ||||||||||||||    
T  21466681 atacactgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 21466751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 47644331 - 47644396
Alignment:
Q  49 aatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    ||||||| |||||| | || ||||||||||||||||| ||||| |||||||| |||||||||||||    
T  47644331 aatactcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaacccacacaaa 47644396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 5602657 - 5602721
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaa 176  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||| |||||| |||||| ||||    
T  5602657 aaagtggtgggacatatattaatttcatccaataagagagtaagtgttagagaaagtattaaaaa 5602721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 28274973 - 28274797
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccc 107  Q
    |||||| |||||| ||||||||||| | ||||||||||  || || |||| | | | ||||||||||||  |||||||| |||| ||| |||| |   ||    
T  28274973 agagtagtgctagtaacactctcttttcaacactctcttaaacacccactttattattggtttaaatcaaggtgggtctcacacattggaaatgggttcc 28274874  T
Q  108 acacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgt 184  Q
    ||  || ||| | ||||||||| |  ||||||||||||| ||||| |||| |||||||||| |||||||| ||||||    
T  28274873 acttaaggtgatgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaagagagtgt 28274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 28942000 - 28941869
Alignment:
Q  16 tgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaag 115  Q
    ||||||||||||||| || | |||||||| ||||| | ||||||||| | || ||||| | | ||||| || | |||| |||||| ||||||||| ||      
T  28942000 tgctagcaacactctttt-taaacactctatctaacattcactctcttattgatttaagtaaatgtggatccatacttagaaaatggaacccacataata 28941902  T
Q  116 tggtaggacatacattgatttcatccaataaaa 148  Q
    |||| ||||||||| | ||||||||||||||||    
T  28941901 tggtgggacatacaataatttcatccaataaaa 28941869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 743546 - 743467
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaa 147  Q
    |||||||||||||| |||||  | |||||||||| |||   ||||||||| | | |||||||||||||||||||||||||    
T  743546 gtttaaatcattgtaggtctctattttgaaaattaaacttccacaaagtgatggaacatacattgatttcatccaataaa 743467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 13889330 - 13889287
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaata 52  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  13889330 agaggaatgctagcaacactctcttttgaacactctctctaata 13889287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 21466614 - 21466680
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaat 75  Q
    |||||| |||||||| ||||||||| |||||||||||||||||| ||||| ||| | || |||||||    
T  21466614 agagtagtgctagcaccactctcttttgaacactctctctaatattcactttcttattgatttaaat 21466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 29418669 - 29418524
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctc-agtggtttaaatcattgtggg-tctacactttgaaaattgaacc 106  Q
    |||| ||||||||||||| |||||| ||| |||||||| ||  ||||||| | |  | ||| | |||||| ||| || ||||||||||| |||| ||||     
T  29418669 agaggaatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgtaggatctacactttggaaatagaact 29418570  T
Q  107 cacacaaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    |||| ||||||||  || ||||||| |||| |||||||||||||||    
T  29418569 cacataaagtggtgagatatacattaattttatccaataaaagagt 29418524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 50773177 - 50773109
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcatt 194  Q
    |||||| |||| | ||||||||||| | ||||||||||||||| || ||||| |||| |||||||||||    
T  50773177 tacattaattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 13114854 - 13114803
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||| ||||||||| |||||||||| || ||||||||||||| |||||||||    
T  13114854 agagaaatgctagcgacactctcttttggacactctctctaacactcactct 13114803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 32848762 - 32848695
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgt 81  Q
    ||||||| |||||||||||| |||||||||||||||  ||||||||| | | ||| | ||||||||||    
T  32848762 aatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgt 32848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 44739114 - 44739165
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    |||| |||| ||||||||||||||| |||||||||||||||  |||||||||    
T  44739114 agaggaatgttagcaacactctcttttgaacactctctctagcactcactct 44739165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 26980441 - 26980395
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactct 60  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||||    
T  26980441 aatgctaacaacactcacttttcaacactctctctaatactcactct 26980395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 14341018 - 14341083
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaag 177  Q
    |||||||| ||||||| |||  ||||||||||||||| | | |||| |||||||||| ||||||||    
T  14341018 aaagtggtgggacatatattagtttcatccaataaaaaaatgagtgttagagagagtgttgaaaag 14341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 41095788 - 41095743
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcactc 59  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactc 41095743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 11135740 - 11135784
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatactcact 58  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||    
T  11135740 aatgctagcaacactctcttttgagcactctctctagcactcact 11135784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 28274783 - 28274835
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct 62  Q
    ||||||| ||||  |||||||||| | |||||||||||||| |||||||||||    
T  28274783 gagtaatactagggacactctcttttcaacactctctctaacactcactctct 28274835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 44760756 - 44760716
Alignment:
Q  112 aaagtggtaggacatacattgatttcatccaataaaagagt 152  Q
    ||||||||| ||  |||||||||||||||||||||||||||    
T  44760756 aaagtggtatgatgtacattgatttcatccaataaaagagt 44760716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 50308822 - 50308786
Alignment:
Q  130 ttgatttcatccaataaaagagtaagtgctagagaga 166  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  50308822 ttgatttcacccaataaaagagtgagtgctagagaga 50308786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 50539565 - 50539525
Alignment:
Q  14 aatgctagcaacactctcttatgaacactctctctaatact 54  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  50539565 aatgctagcaacactcttttttgaacattctctctaatact 50539525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 27997 - 27847
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccac 109  Q
    ||||| |||||||||||| ||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||    
T  27997 gagtagtgctagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccac 27898  T
Q  110 acaaagtggtaggacatacattgatttcatccaataaaagagtaagtgcta 160  Q
    |||||||||| ||||||||||||||| ||||||||||||| || |||||||    
T  27897 acaaagtggtgggacatacattgattccatccaataaaagcgtgagtgcta 27847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 26862 - 27015
Alignment:
Q  15 atgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaa 114  Q
    |||||||||||||||  || ||| |||| ||||||| |  |||||| | | ||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  26862 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaa 26961  T
Q  115 gtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||| | ||||||||||||||  |||||||| ||||| |||| || |||||||    
T  26962 gtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagt 27015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 9791 - 9691
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| |||| |||||||||    
T  9791 gtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagag 9692  T
Q  168 t 168  Q
    |    
T  9691 t 9691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 11337 - 11237
Alignment:
Q  68 gtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagag 167  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| |||| |||||||||    
T  11337 gtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagag 11238  T
Q  168 t 168  Q
    |    
T  11237 t 11237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 2346 - 2237
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||||||||||| |||||| ||| |||||  |  ||||||||||| ||  |||||||||||||||||||  |||||||||| ||||||||||||| |    
T  2346 tttaaatcattgtggatctacattttaaaaatgca--ccacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagagaat 2249  T
Q  169 attgaaaagtga 180  Q
    ||||||||||||    
T  2248 attgaaaagtga 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 2377 - 2268
Alignment:
Q  69 tttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagt 168  Q
    ||||||||||||||| |||||| ||| |||||  |  ||||||||||| ||  |||||||||||||||||||  |||||||||| ||||||||||||| |    
T  2377 tttaaatcattgtggatctacattttaaaaatgca--ccacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagagaat 2280  T
Q  169 attgaaaagtga 180  Q
    ||||||||||||    
T  2279 attgaaaagtga 2268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 204704 - 204810
Alignment:
Q  11 agtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaaaattgaacccaca 110  Q
    |||||||||||||||||||| || |||||| |||||||| |||||||||| | | ||||||| || |||||  ||||||| ||| |||||||| |  |||    
T  204704 agtaatgctagcaacactcttttttgaacattctctctagtactcactcttttattggtttatataattgtaagtctacaatttaaaaattgatcagaca 204803  T
Q  111 caaagtg 117  Q
    |||||||    
T  204804 caaagtg 204810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 297022 - 296832
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtct-acactttgaaaattgaaccca 108  Q
    ||||| |||||||||||||||||| | ||||||||||| || |||||||   | | |||||||||| |  |||||||| |||| ||| |||| |   |||    
T  297022 gagtagtgctagcaacactctcttttcaacactctctcaaacactcacttcattattggtttaaatgaaggtgggtctcacacattggaaatgggttcca 296923  T
Q  109 cacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctcg 199  Q
    |  || ||||| ||||||||| |  ||||||||||||| ||||| |||| |||||||||| ||||||||  |||||  |||||||| ||||    
T  296922 cttaaggtggtgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaagaaagtgtccctagcattactcg 296832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 296833 - 296885
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct 62  Q
    ||||||||||||  ||||| |||| | |||||||||||||| |||||||||||    
T  296833 gagtaatgctagggacactttcttttcaacactctctctaacactcactctct 296885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 8405 - 8554
Alignment:
Q  9 agagtaatgctagcaacactctcttatgaacactctctctaatactcactctctcagtggtttaaatcattgtgggtctacactttgaa----aattgaa 104  Q
    ||||||| |||| |||||||||||| |||| ||||||| ||||||| | ||| | | |||||||||||||| || |||||||||| |||    | ||  |    
T  8405 agagtaaggctaacaacactctcttttgaatactctctttaatactaattcttttattggtttaaatcattatgagtctacacttcgaaagttagttaga 8504  T
Q  105 cccacacaaagtggtaggacatacattgatttcatccaataaaagagtaa 154  Q
     | ||| ||||||||  |||||| ||||||||||||| ||||||||||||    
T  8505 tcaacataaagtggtgagacatatattgatttcatcccataaaagagtaa 8554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 27420 - 27358
Alignment:
Q  88 acactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaaga 150  Q
    ||||||||||||| ||||| ||| |||||||| ||||||| |||||||||| |||||||||||    
T  27420 acactttgaaaatggaacctacataaagtggtgggacatatattgatttcacccaataaaaga 27358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 30979 - 30907
Alignment:
Q  126 tacattgatttcatccaataaaagagtaagtgctagagagagtattgaaaagtgagtgttgctagcattcctc 198  Q
    ||||||||| ||| ||||||||| ||| | ||||||| |||||| | ||||| ||||||||||||| ||||||    
T  30979 tacattgatgtcacccaataaaaaagtgaatgctagaaagagtactcaaaagagagtgttgctagccttcctc 30907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 30984 - 31057
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtgct 159  Q
    ||||||||||||||  ||||||| | ||||||||| ||||||| || |||||| | ||||||| ||| ||||||    
T  30984 ctacactttgaaaacggaacccatataaagtggtatgacatacgttaatttcacctaataaaaaagtgagtgct 31057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 121196 - 121247
Alignment:
Q  10 gagtaatgctagcaacactctcttatgaacactctctctaatactcactctct 62  Q
    ||||||||||||||||| |||||| |||| | |||||||||||||||||||||    
T  121196 gagtaatgctagcaacattctctt-tgaaaaatctctctaatactcactctct 121247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 35703 - 35632
Alignment:
Q  86 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatccaataaaagagtaagtg 157  Q
    ||||| ||||| ||| ||||||||| ||| || | |||||||||||||||||||| ||||| ||||| ||||    
T  35703 ctacattttgagaatggaacccacataaaatgatgggacatacattgatttcatcaaataagagagtgagtg 35632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University