View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2896_low_2 (Length: 408)
Name: NF2896_low_2
Description: NF2896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2896_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 23 - 393
Target Start/End: Original strand, 41652455 - 41652827
Alignment:
| Q |
23 |
cattttcgtttcttt--ttagaaactaacaactcactccatccatcaatggcggttcctccctccgccactccagcttctctttacgtcggcgatctcca |
120 |
Q |
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|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41652455 |
catttttgtttctttctttagaaactaacaactcactccatccatcaatggcggttcctccctccgccactccagcttctctttacgtcggcgatctcca |
41652554 |
T |
|
| Q |
121 |
tcccgacctctccgactctcagcttcacgatgctttctccgatttcaaaactctcgcttctgttcgcatttgcagagactcttcctctggtaaatcactc |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
41652555 |
tcccgacctctccgactctcagcttcacgatgctttctccgatttcaaaactctcgcttctgttcgcatttgccgagactcttcctctggtaaatcactc |
41652654 |
T |
|
| Q |
221 |
tgttatggttacgtcaacttcctctcccctcacgacggtaacatcactttccattcttcctctttcttctgttaatatttctttatttagataatcatta |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41652655 |
tgttatggttacgtcaacttcctctcccctcacgacggtaacatcactttccattcttcctctttcttctgttaatatttctttatttagataatcatta |
41652754 |
T |
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| Q |
321 |
tcattatcattctttattttctttgaatcatgagattttgattctgaattgcattctttaattactgttttct |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41652755 |
tcattatcattctttattttctttgaatcatgagattttgattctgaattgcattctttaattactgttttct |
41652827 |
T |
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