View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2897_high_2 (Length: 356)

Name: NF2897_high_2
Description: NF2897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2897_high_2
NF2897_high_2
[»] chr5 (26 HSPs)
chr5 (19-347)||(14706013-14706341)
chr5 (211-259)||(36796628-36796676)
chr5 (211-247)||(499652-499688)
chr5 (208-259)||(10771806-10771857)
chr5 (208-255)||(11615572-11615619)
chr5 (208-259)||(19177546-19177597)
chr5 (211-257)||(17369306-17369352)
chr5 (209-255)||(27153259-27153305)
chr5 (211-259)||(13508541-13508589)
chr5 (207-259)||(31723906-31723958)
chr5 (211-257)||(20982133-20982179)
chr5 (211-257)||(34198524-34198570)
chr5 (211-253)||(42034167-42034209)
chr5 (211-252)||(14331474-14331515)
chr5 (135-257)||(14714683-14714810)
chr5 (202-259)||(40335785-40335842)
chr5 (211-248)||(41419431-41419468)
chr5 (211-248)||(41534550-41534587)
chr5 (215-259)||(4855796-4855840)
chr5 (211-243)||(14932413-14932445)
chr5 (211-251)||(28578954-28578994)
chr5 (211-259)||(32194013-32194061)
chr5 (207-259)||(33961784-33961836)
chr5 (205-257)||(35135567-35135619)
chr5 (201-257)||(37968980-37969035)
chr5 (211-247)||(39594920-39594956)
[»] chr1 (33 HSPs)
chr1 (210-259)||(29793618-29793667)
chr1 (208-257)||(5157175-5157224)
chr1 (211-259)||(4757439-4757487)
chr1 (211-259)||(6292593-6292641)
chr1 (204-259)||(33723296-33723351)
chr1 (212-257)||(10199330-10199375)
chr1 (215-260)||(15515656-15515701)
chr1 (207-259)||(9602571-9602623)
chr1 (209-241)||(18403126-18403158)
chr1 (211-259)||(24460322-24460370)
chr1 (211-259)||(48748516-48748564)
chr1 (212-255)||(2522701-2522744)
chr1 (216-259)||(25944542-25944585)
chr1 (215-258)||(32958739-32958782)
chr1 (206-257)||(51929378-51929429)
chr1 (205-259)||(3597196-3597250)
chr1 (221-259)||(43420359-43420397)
chr1 (212-256)||(6279503-6279547)
chr1 (211-259)||(6659781-6659829)
chr1 (211-259)||(7217995-7218043)
chr1 (211-259)||(15558312-15558360)
chr1 (211-259)||(15784897-15784945)
chr1 (209-253)||(18327065-18327109)
chr1 (215-259)||(28837278-28837322)
chr1 (210-250)||(30257794-30257834)
chr1 (211-251)||(30259407-30259447)
chr1 (211-259)||(33976279-33976327)
chr1 (211-259)||(34536259-34536307)
chr1 (215-259)||(35017683-35017727)
chr1 (211-247)||(41505787-41505823)
chr1 (211-259)||(44115826-44115874)
chr1 (203-247)||(48282235-48282279)
chr1 (211-259)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (208-256)||(32730166-32730214)
chr7 (212-258)||(529464-529510)
chr7 (211-253)||(47046029-47046071)
chr7 (211-248)||(30812250-30812287)
chr7 (205-257)||(3836598-3836650)
chr7 (207-259)||(8427114-8427166)
chr7 (211-259)||(47041960-47042008)
chr7 (211-258)||(1418521-1418568)
chr7 (208-247)||(9210934-9210973)
chr7 (211-256)||(5276594-5276639)
chr7 (211-256)||(7513663-7513708)
chr7 (206-247)||(19302479-19302520)
chr7 (213-250)||(46946017-46946054)
chr7 (211-247)||(11619079-11619115)
chr7 (207-259)||(12234806-12234858)
chr7 (211-259)||(23214956-23215004)
chr7 (211-259)||(29363609-29363657)
chr7 (201-253)||(31341242-31341294)
chr7 (211-247)||(33266407-33266443)
chr7 (211-247)||(33673190-33673226)
chr7 (210-254)||(33871347-33871391)
chr7 (211-259)||(40598406-40598454)
chr7 (207-259)||(44289960-44290012)
[»] chr4 (26 HSPs)
chr4 (212-259)||(1017129-1017176)
chr4 (211-274)||(24193618-24193681)
chr4 (208-259)||(32420976-32421027)
chr4 (209-259)||(18628472-18628522)
chr4 (215-259)||(18512440-18512484)
chr4 (211-247)||(27043751-27043787)
chr4 (195-259)||(56186803-56186867)
chr4 (204-259)||(22845620-22845674)
chr4 (211-257)||(1075561-1075607)
chr4 (209-259)||(19305027-19305077)
chr4 (211-257)||(28259376-28259422)
chr4 (211-259)||(7367975-7368023)
chr4 (208-247)||(8420908-8420948)
chr4 (212-252)||(10365883-10365923)
chr4 (211-247)||(15173224-15173260)
chr4 (211-247)||(17822786-17822822)
chr4 (211-255)||(17975258-17975302)
chr4 (211-259)||(19429391-19429439)
chr4 (211-259)||(28615435-28615483)
chr4 (211-259)||(32071964-32072012)
chr4 (211-247)||(42403944-42403980)
chr4 (211-259)||(44320050-44320098)
chr4 (207-259)||(47146045-47146097)
chr4 (211-247)||(49940088-49940124)
chr4 (215-259)||(54277248-54277292)
chr4 (211-259)||(55870263-55870311)
[»] chr3 (17 HSPs)
chr3 (207-259)||(22667504-22667556)
chr3 (207-259)||(22724143-22724195)
chr3 (211-259)||(20210849-20210897)
chr3 (211-259)||(21872216-21872264)
chr3 (211-246)||(26990146-26990181)
chr3 (208-255)||(41848634-41848681)
chr3 (211-258)||(51929843-51929890)
chr3 (205-247)||(16072956-16072998)
chr3 (211-257)||(31512486-31512532)
chr3 (210-247)||(26911704-26911741)
chr3 (214-259)||(33965412-33965457)
chr3 (211-259)||(20173811-20173859)
chr3 (209-257)||(24158435-24158483)
chr3 (211-247)||(25447166-25447202)
chr3 (211-259)||(32663739-32663787)
chr3 (211-259)||(37138383-37138431)
chr3 (211-259)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (211-259)||(13866979-13867027)
chr2 (211-259)||(22878199-22878247)
chr2 (206-255)||(43985314-43985363)
chr2 (215-255)||(3458700-3458740)
chr2 (211-259)||(15370244-15370292)
chr2 (207-259)||(28803447-28803499)
chr2 (211-259)||(40759261-40759309)
chr2 (211-251)||(40837358-40837398)
chr2 (211-259)||(41170711-41170759)
chr2 (211-258)||(18525162-18525209)
chr2 (211-258)||(28810373-28810420)
chr2 (208-259)||(40158819-40158870)
chr2 (222-256)||(29430862-29430896)
chr2 (211-256)||(1830143-1830188)
chr2 (211-256)||(8017538-8017583)
chr2 (210-259)||(21616580-21616629)
chr2 (211-260)||(26372648-26372697)
chr2 (215-248)||(41516949-41516982)
chr2 (211-255)||(3078529-3078573)
chr2 (211-247)||(18179062-18179098)
chr2 (211-247)||(27317492-27317528)
chr2 (211-247)||(30331864-30331900)
chr2 (211-259)||(35329739-35329787)
chr2 (211-247)||(40059382-40059418)
chr2 (211-247)||(40085282-40085318)
chr2 (211-259)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (211-258)||(4560604-4560651)
chr8 (213-260)||(10560147-10560194)
chr8 (190-255)||(34290974-34291039)
chr8 (207-255)||(1821934-1821982)
chr8 (207-255)||(1856379-1856427)
chr8 (211-259)||(7714343-7714391)
chr8 (211-259)||(9700102-9700150)
chr8 (211-259)||(18331815-18331863)
chr8 (209-257)||(22705031-22705079)
chr8 (211-247)||(38602440-38602476)
chr8 (211-257)||(2606152-2606198)
chr8 (211-253)||(8060775-8060817)
chr8 (205-259)||(43368615-43368669)
chr8 (210-259)||(1561378-1561427)
chr8 (214-259)||(6950423-6950468)
chr8 (215-259)||(1892149-1892193)
chr8 (211-259)||(2487929-2487977)
chr8 (211-259)||(7008699-7008747)
chr8 (211-259)||(10488564-10488612)
chr8 (211-259)||(14926903-14926951)
chr8 (211-259)||(16162861-16162909)
chr8 (207-259)||(20186381-20186433)
chr8 (207-259)||(20205448-20205500)
chr8 (205-253)||(29168776-29168824)
chr8 (211-247)||(30251375-30251411)
chr8 (211-255)||(32976478-32976522)
chr8 (215-259)||(39881646-39881690)
chr8 (207-259)||(43393689-43393741)
chr8 (207-247)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (211-257)||(13908343-13908389)
chr6 (211-257)||(31776193-31776239)
chr6 (211-259)||(8420117-8420166)
chr6 (207-259)||(12111068-12111120)
chr6 (216-259)||(6742912-6742955)
chr6 (216-259)||(7351597-7351640)
chr6 (205-259)||(2732160-2732216)
chr6 (212-257)||(17241082-17241127)
chr6 (210-259)||(26559159-26559208)
chr6 (211-259)||(738462-738510)
chr6 (221-257)||(3750100-3750136)
chr6 (211-259)||(4325226-4325274)
chr6 (211-259)||(8010458-8010506)
chr6 (211-259)||(10016724-10016772)
chr6 (211-247)||(20861619-20861655)
chr6 (211-247)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (211-257)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 309; Significance: 1e-174; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 14706013 - 14706341
Alignment:
Q  19 gctcatccacaacatatagtcatatactacacaaaagtgcaattttaaggaaaacatcaacattcaaacaaatataatcatgctactacaagaagaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14706013 gctcatccacaacatatagtcatatactacacaaaagtgcaattttaaggaaaacatcaacattgaaacaaatataatcatgctactacaagacgaaatt 14706112  T
Q  119 ggatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcacccaaaacaaattgtgaaactaaagacctatttggatt 218  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706113 gaatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcacccaaaacaaattgtgaaactaaagacctatttggatt 14706212  T
Q  219 gacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttggagagttgtataagctcttttcaacttaattatctccataaactc 318  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14706213 gacttatttgagcttacctactgacataaacacttgtgagatgtgaaactatttgaagagttgtataagctcttttcaacttaattatctccataaactc 14706312  T
Q  319 atagggataacttacgaaaacagtataat 347  Q
    |||||||||||||||||||||||||||||    
T  14706313 atagggataacttacgaaaacagtataat 14706341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 36796628 - 36796676
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36796628 tttggattgacttatttgagcttatctaatgacataaacacttgtgaga 36796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 499652 - 499688
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||||||||||||||||    
T  499652 tttggattgacttatttgagcttacctactgacataa 499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 10771806 - 10771857
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  10771806 ctatttggattggcttatttgagcttatctactggcataagcacttgtgaga 10771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 11615572 - 11615619
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  11615572 ctatttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 19177597 - 19177546
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||| ||||||| || ||| |||||||||||||    
T  19177597 ctatttggattgacttatttgagtttacctattggcatgaacacttgtgaga 19177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 17369352 - 17369306
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||    
T  17369352 tttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 27153259 - 27153305
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  27153259 tatttggattgacttctttgagcttacctactggcaaaaacacttgt 27153305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 13508589 - 13508541
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||    
T  13508589 tttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 31723958 - 31723906
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||    
T  31723958 cctatttggattgacttatttgagcttatgtactagcataaacacttatgaga 31723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 20982133 - 20982179
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  20982133 tttggattggcttatttgagcttatctactgtcgtaaacacttgtga 20982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 34198570 - 34198524
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||    
T  34198570 tttggattgacttatttgagtttatttactaacataaacacttgtga 34198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 42034209 - 42034167
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacactt 253  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  42034209 tttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 14331515 - 14331474
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacact 252  Q
    |||||||||||||||||||||||| |||||| ||||| ||||    
T  14331515 tttggattgacttatttgagcttatctactgtcataagcact 14331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 14714683 - 14714810
Alignment:
Q  135 tcatagccaaagcattccggagaccaatt-actacaaaataatggcacccaaaacaaa---ttgtgaaactaaagacc-tatttggattgacttatttga 229  Q
    |||||||||||| || ||||| || |||| | || |||||||||||||| |||| |||   ||||||||||||||  | | |||| |||| || ||||||    
T  14714683 tcatagccaaagtatgccggaaacaaatttagtaaaaaataatggcaccaaaaaaaaaaagttgtgaaactaaagggcatgtttgaattggctcatttga 14714782  T
Q  230 gcttacctactgacataaacacttgtga 257  Q
    ||||| | |||||||||| |||||||||    
T  14714783 gcttatccactgacataagcacttgtga 14714810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 40335785 - 40335842
Alignment:
Q  202 aaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||| ||| |||||||||||||||||||| ||| |||||  || ||||||||||||||    
T  40335785 aaaggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgaga 40335842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 41419468 - 41419431
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaa 248  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41419468 tttggattgacttatttgagctaatctactgacataaa 41419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 41534587 - 41534550
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaa 248  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41534587 tttggattgacttatttgagctaatctactgacataaa 41534550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 4855840 - 4855796
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||  || |||| |||||||||||||||    
T  4855840 gattgacttatttgagcttatataatgacttaaacacttgtgaga 4855796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 14932445 - 14932413
Alignment:
Q  211 tttggattgacttatttgagcttacctactgac 243  Q
    |||||||||||||||||||||||| ||||||||    
T  14932445 tttggattgacttatttgagcttatctactgac 14932413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 28578994 - 28578954
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacac 251  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  28578994 tttgaattgacttatttgagcttatctactgacaaaaacac 28578954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 32194013 - 32194061
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| ||| ||| ||||  ||||||||||    
T  32194013 tttggattgacttatttgagcttaactaatgatataagaacttgtgaga 32194061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 33961836 - 33961784
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||| ||||||||||||| |||| ||||||| ||||| |||||    
T  33961836 cctatttgaattgaattatttgagcttatctacggacataagcacttatgaga 33961784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 35135567 - 35135619
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||| |||||||| |||||||| |||||  |||||||||||| |||||||||    
T  35135567 gacctgtttggattaacttatttcagcttctctactgacataaccacttgtga 35135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 37969035 - 37968980
Alignment:
Q  201 taaagacctatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||||  ||||||||    
T  37969035 taaagacctatctggat-gacttgtttgagcttatctactgacataagtacttgtga 37968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 39594956 - 39594920
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| |||| |||||||    
T  39594956 tttggattgacttatttgagcttatctaccgacataa 39594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 29793618 - 29793667
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29793618 atttgtattgacttatttgagcttatctactgacataaacacttgtgaga 29793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 5157224 - 5157175
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5157224 ctatttggattgacttatttgaacttatctacggacataaacacttgtga 5157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 4757487 - 4757439
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgaga 4757439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 6292641 - 6292593
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  6292641 tttggattgacttatttgagcttatctactgacataagcacttttgaga 6292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 33723296 - 33723351
Alignment:
Q  204 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||| ||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  33723296 agacctgtttggattgacttatttgaacttatctactaccataaacacttgtgaga 33723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 10199330 - 10199375
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtga 10199375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 15515701 - 15515656
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgagaa 260  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgagaa 15515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 9602571 - 9602623
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||| |||||||| ||||| || ||| |||||||||||    
T  9602571 cctatttggattgacttatctgagcttatctactaacttaagcacttgtgaga 9602623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 18403126 - 18403158
Alignment:
Q  209 tatttggattgacttatttgagcttacctactg 241  Q
    |||||||||||||||||||||||||||||||||    
T  18403126 tatttggattgacttatttgagcttacctactg 18403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 24460322 - 24460370
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||    
T  24460322 tttggattgacttatttgaacttatctactgacatgagcacttgtgaga 24460370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 48748516 - 48748564
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||||    
T  48748516 tttgaattgacttatttgagcttatccattgacataaacacttgtgaga 48748564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 2522744 - 2522701
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgt 2522701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 25944585 - 25944542
Alignment:
Q  216 attgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  25944585 attgacttatttgcgcttatttactgacataaacacttgtgaga 25944542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 32958782 - 32958739
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||    
T  32958782 gattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 51929378 - 51929429
Alignment:
Q  206 acctatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||| ||||||||||||| |||||||||| |||||||||||| ||| |||||    
T  51929378 acctctttggattgacttttttgagcttatctactgacataagcacctgtga 51929429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 3597196 - 3597250
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||| |||||||||||    
T  3597196 gacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgaga 3597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 43420397 - 43420359
Alignment:
Q  221 cttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgaga 43420359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 6279547 - 6279503
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||    
T  6279547 ttggagtgacttatttcagcttaactactgacataagcacttgtg 6279503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 6659829 - 6659781
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||| |||||| |||||  ||||| |||||||||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgaga 6659781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 7217995 - 7218043
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||| |||||| |||| | ||||||||||| |||||    
T  7217995 tttggattgacttatttaagcttatctaccggcataaacacttctgaga 7218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 15558360 - 15558312
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||| ||||||||||||| | |||| | |||||||||||||||    
T  15558360 tttggattgagttatttgagcttatcgactggcttaaacacttgtgaga 15558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 15784945 - 15784897
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||| ||||    
T  15784945 tttggattgacttatttgagcttatttactgtcataaaaacttgcgaga 15784897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 18327065 - 18327109
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacactt 253  Q
    ||||||||||| |||||||||||||| |||||| ||||| |||||    
T  18327065 tatttggattggcttatttgagcttatctactgtcataagcactt 18327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 28837278 - 28837322
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||    
T  28837278 gattggcttatttgagcttatctactgacataagcacttgagaga 28837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 30257834 - 30257794
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaaca 250  Q
    ||||||||| ||||||||||| ||| |||||||||||||||    
T  30257834 atttggatttacttatttgagtttatctactgacataaaca 30257794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 30259407 - 30259447
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacac 251  Q
    |||||||||||||||||||| |||||||| | |||||||||    
T  30259407 tttggattgacttatttgagtttacctaccggcataaacac 30259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 33976327 - 33976279
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||||  || |||||| | |||||||||||    
T  33976327 tttggattgacttatttgagcttatttaatgacatcagcacttgtgaga 33976279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 34536307 - 34536259
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||| |||||||||||| | || ||| ||||||||||||||||||||    
T  34536307 tttggaatgacttatttgaacgtatctattgacataaacacttgtgaga 34536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 35017727 - 35017683
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||    
T  35017727 gattggcttatttgagcttatctattggcataaacacttgtgaga 35017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 41505823 - 41505787
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  41505823 tttggattggcttatttgagcttatctactgacataa 41505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 44115826 - 44115874
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||| ||||||||| || |||  ||||||||||    
T  44115826 tttggattgacttatttgagtttacctactcacttaagtacttgtgaga 44115874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 48282279 - 48282235
Alignment:
Q  203 aagacctatttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||| ||||| |||||| |||||||||||||||||| |||||    
T  48282279 aagacctgtttgggttgactaatttgagcttacctactggcataa 48282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 52014036 - 52013988
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||| ||| || ||||||||| |||||||    
T  52014036 tttggattaacttatttgagcttatctattggcataaacacgtgtgaga 52013988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 32730166 - 32730214
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  32730166 ctatttcgattgacttatttgagcttacctactgacataaacatttgtg 32730214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 47046029 - 47046071
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacactt 253  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046029 tttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 30812287 - 30812250
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaa 248  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30812287 tttggattgacttatttgagtttacctactgacataaa 30812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 3836598 - 3836650
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| |||||||||    
T  3836598 gacctatttggattgccttatttgagcttatctactggcttaagcacttgtga 3836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 8427166 - 8427114
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||    
T  8427166 cctatttggattgatttatttgagcttatctactaacataagtacttgtgaga 8427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 47041960 - 47042008
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||    
T  47041960 tttggattgacttatttgagcatatctattgacattaacacttgtgaga 47042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 1418568 - 1418521
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  1418568 tttggattgacttatttgagcttatctactggcataagcacttatgag 1418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 9210973 - 9210934
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  9210973 ctatttggattgacttatttgagcttatctactgatataa 9210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 5276639 - 5276594
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||    
T  5276639 tttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 7513708 - 7513663
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  7513708 tttgaattgacttatttgagcttatctactggcataagcacttgtg 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 19302479 - 19302520
Alignment:
Q  206 acctatttggattgacttatttgagcttacctactgacataa 247  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  19302479 acctgtttgaattgacttatttgagcttatctactgacataa 19302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 46946054 - 46946017
Alignment:
Q  213 tggattgacttatttgagcttacctactgacataaaca 250  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46946054 tggattgacttatttgagcttagctactggcataaaca 46946017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 11619079 - 11619115
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  11619079 tttggattggcttatttgagcttatctactgacataa 11619115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 12234806 - 12234858
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||| ||||||||| |||||| ||| | ||| |||||||    
T  12234806 cctatttggattgacttagttgagcttatctactggcattagcacgtgtgaga 12234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 23215004 - 23214956
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||| |||| |||||  ||||||||||| |||||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgaga 23214956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 29363657 - 29363609
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| ||||||||| |||| ||||| |||||| |||||||||||    
T  29363657 tttggattggcttatttgaacttatctactaacataagcacttgtgaga 29363609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 31341294 - 31341242
Alignment:
Q  201 taaagacctatttggattgacttatttgagcttacctactgacataaacactt 253  Q
    ||||||| | |||||||||||||||||||||||  |||||  |||||||||||    
T  31341294 taaagacatgtttggattgacttatttgagcttttctacttgcataaacactt 31341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 33266407 - 33266443
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| |||| |||||||    
T  33266407 tttggattgacttatttgagcttatctaccgacataa 33266443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 33673226 - 33673190
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673226 tttggattgactcatttgagcttatctactgacataa 33673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 33871391 - 33871347
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaacacttg 254  Q
    |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  33871391 attttgattgacttttttgagcttatctacttacataaacacttg 33871347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 40598406 - 40598454
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| |||||  ||| |||||||| ||||    
T  40598406 tttggattgacttatttgagcttatctactagcatgaacacttgcgaga 40598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 44289960 - 44290012
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  44289960 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 44290012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 1017176 - 1017129
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgaga 1017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 24193681 - 24193618
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttgg 274  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||  |||| |||||||||    
T  24193681 tttggattgacttatttgagcttatctcctggcataaacacttgtgagttgtgagactatttgg 24193618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 32420976 - 32421027
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32420976 ctatttggattgacttatttgagcttacctactagcataagcacttgtgaga 32421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 18628472 - 18628522
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18628472 tatttagattgacgtatttgagcttatctactgacataaacacttgtgaga 18628522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 18512440 - 18512484
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18512440 gattaacttatttgagcttatctactgacataaacacttgtgaga 18512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 27043751 - 27043787
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27043751 tttggattgacttatttgagcttatctactgacataa 27043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 56186803 - 56186867
Alignment:
Q  195 tgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||| || | |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||    
T  56186803 tgaaactaaacacttgtttggattaacttattcgagtttatctactaacataaacacttgtgaga 56186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 22845620 - 22845674
Alignment:
Q  204 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||  ||||||||||    
T  22845620 agacctatttggattggcttatttgagcttatctact-acataagtacttgtgaga 22845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 1075607 - 1075561
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||| |||| |||||||||||||| |||||| |||||||||||||||    
T  1075607 tttgaattggcttatttgagcttatctactggcataaacacttgtga 1075561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 19305077 - 19305027
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||| ||| ||| |||||||| || ||||||||    
T  19305077 tatttggattgacttatttgagattatctattgacataagcatttgtgaga 19305027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 28259422 - 28259376
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||    
T  28259422 tttggactgacttatttgagcttatcaactgacataagcacttgtga 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 7367975 - 7368023
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||| ||| |||| | ||||||| |||||||||    
T  7367975 tttggattgacttatttgagtttatctacaggcataaacgcttgtgaga 7368023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 8420948 - 8420908
Alignment:
Q  208 ctatttggattgactta-tttgagcttacctactgacataa 247  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  8420948 ctatttggattgacttagtttgagcttatctactgacataa 8420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 10365923 - 10365883
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacact 252  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacact 10365883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 15173224 - 15173260
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  15173224 tttggattgacttatttgaacttatctactgacataa 15173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 17822786 - 17822822
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  17822786 tttggattaacttatttgagcttatctactgacataa 17822822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 17975258 - 17975302
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  17975258 tttggattgacttatttgagcttatctaccaacacaaacacttgt 17975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 19429391 - 19429439
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| ||||||||||||||  |||||  ||||||||||||||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgaga 19429439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 28615483 - 28615435
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||| || ||| |||||  |||||||||||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgaga 28615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 32072012 - 32071964
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||| ||||||||||||| ||| ||| |||||||| |||||||||||    
T  32072012 tttggactgacttatttgagtttatctattgacataagcacttgtgaga 32071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 42403944 - 42403980
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| | ||||||||||    
T  42403944 tttggattgacttatttgagcttatcaactgacataa 42403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 44320098 - 44320050
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||  ||||||||||||||||| || |||||||| ||||||||    
T  44320098 tttggattggtttatttgagcttacctattggcataaacaattgtgaga 44320050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 47146097 - 47146045
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||| ||||  || || ||||| |||||||||||    
T  47146097 cctatttggattgacttatttgaacttatatattggcataagcacttgtgaga 47146045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 49940088 - 49940124
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||||||||||||| || ||||||    
T  49940088 tttggattgacttatttgagcttacctgctaacataa 49940124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 54277248 - 54277292
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||||    
T  54277248 gattgacttatttgaacttatctagtgacataaacacttatgaga 54277292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 55870263 - 55870311
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870263 tttggattaacttatttgagtttatctaatgacataaacatttgtgaga 55870311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 22667556 - 22667504
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22667556 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 22724195 - 22724143
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22724195 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22724143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 20210849 - 20210897
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  20210849 tttggattgatttatttgaggttatctactgacataaccacttgtgaga 20210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 21872216 - 21872264
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||||||    
T  21872216 tttggattaacttatttgatcttatctactgacataagcacttgtgaga 21872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 26990146 - 26990181
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacata 246  Q
    |||||||||||||||||||||||| |||||||||||    
T  26990146 tttggattgacttatttgagcttatctactgacata 26990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 41848634 - 41848681
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  41848634 ctatttagattgacttatttgagtttatctactaacataaacacttgt 41848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 51929890 - 51929843
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||    
T  51929890 tttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 16072956 - 16072998
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataa 247  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  16072956 gacctgtttggattgacttatttgagcttatctaatgacataa 16072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 31512532 - 31512486
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||||| ||||||||||||||||  ||| |||||||||||    
T  31512532 tttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 26911741 - 26911704
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  26911741 atttggattgacttatttgagtttatctactgacataa 26911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 33965412 - 33965457
Alignment:
Q  214 ggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| |||||||||||| |||||||| ||||||| |||||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgaga 33965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 20173811 - 20173859
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||| || ||| ||| |||| |||||||||||    
T  20173811 tttggattgacttatttgagcgtatctattgaaataagcacttgtgaga 20173859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 24158435 - 24158483
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||||| ||||||| |||||| ||||||||||||  ||||||||    
T  24158435 tatttggattggcttatttaagcttatctactgacataagtacttgtga 24158483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 25447166 - 25447202
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  25447166 tttggattgacttatttgagtttatctactgacataa 25447202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 32663787 - 32663739
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||||||| |||| |||| | ||||||||||||    
T  32663787 tttggattggcttatttgagcttatctaccgacaaatacacttgtgaga 32663739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 37138431 - 37138383
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||| ||  ||| ||||||||||||||||||||||||    
T  37138431 tttggattggcttattagaatttatctactgacataaacacttgtgaga 37138383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 44014719 - 44014767
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  44014719 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 44014767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 13867027 - 13866979
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  13867027 tttggattgacctatttgagcttatctactgccataaacacttgtgaga 13866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 22878247 - 22878199
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgaga 22878199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 43985363 - 43985314
Alignment:
Q  206 acctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  43985363 acctatttggatcgacttatttaagtttatctactgacataaacacttgt 43985314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 3458740 - 3458700
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgt 255  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  3458740 gattgacttatttgagcttacttactggcataaacacttgt 3458700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 15370244 - 15370292
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  15370244 tttggattgacttatttgagcttatctactggcataagcatttgtgaga 15370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 28803447 - 28803499
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||| |||||||    
T  28803447 cctatttggattgacttatttgagcttatctaccggcataagcacatgtgaga 28803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 40759309 - 40759261
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  40759309 tttggattgccttatttgagcttatctattgacataagcacttgtgaga 40759261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 40837358 - 40837398
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacac 251  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  40837358 tttggattggcttatttgagcttatctactgacataaacac 40837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 41170759 - 41170711
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  41170759 tttggattggcttatttgagtttatctactaacataaacacttgtgaga 41170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 18525162 - 18525209
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  18525162 tttgaattgacttatttgagcttatctacagacataaacactcgtgag 18525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 28810373 - 28810420
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  28810373 tttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 40158870 - 40158819
Alignment:
Q  208 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||| ||||||||||| || ||||||||||||  ||||||||||    
T  40158870 ctatttggattggcttatttgagcatatctactgacataagaacttgtgaga 40158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 29430896 - 29430862
Alignment:
Q  222 ttatttgagcttacctactgacataaacacttgtg 256  Q
    ||||||||||||| |||||||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtg 29430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 1830188 - 1830143
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||    
T  1830188 tttggattgacttatttgagtttatttactgacataagcacttgtg 1830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 8017583 - 8017538
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtg 256  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  8017583 tttggattgacttatttgaggttatctattgacataagcacttgtg 8017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 21616580 - 21616629
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||| || ||| | ||||||||||||| ||||||||    
T  21616580 atttggattgacttatttcagtttatccactgacataaacatttgtgaga 21616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 26372648 - 26372697
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgagaa 260  Q
    |||||||||||| ||||||||||| || ||||||||| || |||||||||    
T  26372648 tttggattgactcatttgagcttatcttctgacataagcatttgtgagaa 26372697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 41516949 - 41516982
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaa 248  Q
    |||||||||||||||||||||||||| |||||||    
T  41516949 gattgacttatttgagcttacctactcacataaa 41516982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 3078529 - 3078573
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  3078529 tttggattgacttatttgagcttatctaccaacacaaacacttgt 3078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 18179098 - 18179062
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  18179098 tttggattgacttatttgagcttatctactaacataa 18179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 27317528 - 27317492
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| |||| |||||||    
T  27317528 tttggattgacttatttgagcttatctaccgacataa 27317492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 30331900 - 30331864
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  30331900 tttggattgacttatttcagcttatctactgacataa 30331864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 35329739 - 35329787
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||| |||||||| |||||  |||||||||| ||||||    
T  35329739 tttggattgacttatgtgagcttatctactaccataaacactagtgaga 35329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 40059382 - 40059418
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40059382 tttggattgacttatttgagtttatctactgacataa 40059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 40085282 - 40085318
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40085282 tttggattgacttatttgagtttatctactgacataa 40085318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 40851747 - 40851699
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||| |||||  | |||||||||||| ||||||||    
T  40851747 tttggattgacttatttgcgcttaattgctgacataaacaattgtgaga 40851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 4560651 - 4560604
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgag 258  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  4560651 tttggattgacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 10560194 - 10560147
Alignment:
Q  213 tggattgacttatttgagcttacctactgacataaacacttgtgagaa 260  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  10560194 tggattgacttagttgagcttatctactgacataaacatttgtgagaa 10560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 34291039 - 34290974
Alignment:
Q  190 aattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||| |||||||| || ||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  34291039 aattttgaaactagaggcctatttcgattgacttgtttgagttcatctactgacataaacacttgt 34290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 1821982 - 1821934
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1821982 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1821934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 1856427 - 1856379
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1856427 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1856379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 7714391 - 7714343
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||    
T  7714391 tttggattgacttatttgagcttatataatgtcataaacacttgtgaga 7714343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 9700150 - 9700102
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 9700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 18331863 - 18331815
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 22705031 - 22705079
Alignment:
Q  209 tatttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||| |||| |||||||||||||||||| | ||||||||||||||||    
T  22705031 tatttgaattggcttatttgagcttacctattaacataaacacttgtga 22705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 38602476 - 38602440
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38602476 tttggattgacttatttgagcttatctactgacataa 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 2606198 - 2606152
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  2606198 tttggattgacttattcgagcttatctactgacataatcactagtga 2606152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 8060817 - 8060775
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacactt 253  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  8060817 tttggattgacttatttgagcatatctattgacataaacactt 8060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 43368615 - 43368669
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| || ||||||||    
T  43368615 gacctgtttggattgacttatttgatcttatctactaacataagcatttgtgaga 43368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 1561427 - 1561378
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||| |||||||| |||| ||| || |||||||||||||||||    
T  1561427 atttggattgatttatttgatcttatctaatggcataaacacttgtgaga 1561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 6950468 - 6950423
Alignment:
Q  214 ggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgaga 6950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 1892149 - 1892193
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||| ||| |||| | |||||||||||||||||    
T  1892149 gattgacttatttgagtttatctaccgtcataaacacttgtgaga 1892193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 2487929 - 2487977
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||| | | |||||||||||| |||||||||||    
T  2487929 tttggattggcttatttgagttcatctactgacataagcacttgtgaga 2487977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 7008747 - 7008699
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||| ||||||||||||||| ||| |||||| ||||| |||||||||||    
T  7008747 tttgaattgacttatttgagtttatctactggcataagcacttgtgaga 7008699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 10488612 - 10488564
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||||||| | ||| |||||||||| |||||||    
T  10488612 tttggattggcttatttgagcttatcaactaacataaacacatgtgaga 10488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 14926903 - 14926951
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||| ||||  ||||| ||||| |||||||||||    
T  14926903 tttggattgacttatttgaacttatttactggcataagcacttgtgaga 14926951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 16162909 - 16162861
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  16162909 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 16162861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 20186381 - 20186433
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20186381 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20186433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 20205448 - 20205500
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20205448 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20205500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 29168776 - 29168824
Alignment:
Q  205 gacctatttggattgacttatttgagcttacctactgacataaacactt 253  Q
    |||||||||| ||||||| |||||||||||||||||  ||||| |||||    
T  29168776 gacctatttgtattgactgatttgagcttacctactagcataagcactt 29168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 30251375 - 30251411
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30251375 tttggattggcttatttgagcttatctactgacataa 30251411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 32976522 - 32976478
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgt 255  Q
    ||||||||  |||||||||||||| |||||||||||| |||||||    
T  32976522 tttggattcccttatttgagcttatctactgacataagcacttgt 32976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 39881646 - 39881690
Alignment:
Q  215 gattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgaga 39881690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 43393689 - 43393741
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||||||||| |||||| |||||  || |||||||| |||||    
T  43393689 cctatttggattgacttatttaagcttatctacttgcaaaaacacttttgaga 43393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 43717851 - 43717891
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  43717851 cctatttggattggcttatttgagcttatctattgacataa 43717891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 13908389 - 13908343
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||    
T  13908389 tttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 31776193 - 31776239
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31776193 tttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 8420117 - 8420166
Alignment:
Q  211 tttggattgactt-atttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  8420117 tttggattgactttatttgagcttatctattgacataaacacttgtgaga 8420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 12111120 - 12111068
Alignment:
Q  207 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||||||| |||||  ||||| |||||| ||||    
T  12111120 cctatttggattgacttatttgagcttatctactagcataagcacttgcgaga 12111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 6742955 - 6742912
Alignment:
Q  216 attgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||||||||||||||||  ||||| |||||||||||    
T  6742955 attgacttatttgagcttacctactagcataatcacttgtgaga 6742912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 7351597 - 7351640
Alignment:
Q  216 attgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  7351597 attgacttatttgagtttatctactgacataagcacttgtgaga 7351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 2732160 - 2732216
Alignment:
Q  205 gacctatttggattgacttattt--gagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||  ||||||  |||||||||||| |||||||||||    
T  2732160 gacctattgggattgacttatttgagagcttgtctactgacataagcacttgtgaga 2732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 17241082 - 17241127
Alignment:
Q  212 ttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||| ||||||||||| |||  |||||||||||||||||||||    
T  17241082 ttggatttacttatttgagtttatatactgacataaacacttgtga 17241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 26559159 - 26559208
Alignment:
Q  210 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||| ||||||||||| |||||||||| ||||| || ||||||||    
T  26559159 atttggattaacttatttgagtttacctactggcataagcatttgtgaga 26559208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 738462 - 738510
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||||||||    
T  738462 tttggattaacttatttgagcttatctattgagataaacatttgtgaga 738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 3750136 - 3750100
Alignment:
Q  221 cttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  3750136 cttatctgagcttatctactgacataaacacttgtga 3750100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 4325226 - 4325274
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||||| |||| || ||| ||||| ||||||||||||||||||    
T  4325226 tttggattgactaattttagtttatctactaacataaacacttgtgaga 4325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 8010506 - 8010458
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    ||||||||||||||| |||||||| ||| || |||||||| ||||||||    
T  8010506 tttggattgacttatgtgagcttatctattggcataaacatttgtgaga 8010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 10016772 - 10016724
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 259  Q
    |||||||||  ||||||||||||| |||| | |||||||||||||||||    
T  10016772 tttggattggtttatttgagcttatctacaggcataaacacttgtgaga 10016724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 20861619 - 20861655
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  20861619 tttggattgtcttatttgagcttacctactggcataa 20861655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 21405075 - 21405111
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataa 247  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21405075 tttggattgacttatttgagcttatatactgacataa 21405111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 159894 - 159940
Alignment:
Q  211 tttggattgacttatttgagcttacctactgacataaacacttgtga 257  Q
    ||||||||| |||||||||||||| ||||| | ||||||||||||||    
T  159894 tttggattggcttatttgagcttatctactaatataaacacttgtga 159940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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