View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2897_low_2 (Length: 663)

Name: NF2897_low_2
Description: NF2897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2897_low_2
NF2897_low_2
[»] chr2 (44 HSPs)
chr2 (5-410)||(39738273-39738683)
chr2 (412-555)||(39738711-39738854)
chr2 (556-647)||(20700906-20700997)
chr2 (560-647)||(10249304-10249391)
chr2 (560-647)||(13438434-13438521)
chr2 (560-647)||(17473111-17473198)
chr2 (560-648)||(19930742-19930830)
chr2 (567-647)||(33436029-33436109)
chr2 (556-644)||(36168930-36169018)
chr2 (555-647)||(40613819-40613911)
chr2 (560-647)||(28863546-28863633)
chr2 (560-647)||(32505570-32505657)
chr2 (560-647)||(7465657-7465744)
chr2 (557-647)||(44152018-44152108)
chr2 (554-647)||(3440070-3440163)
chr2 (574-647)||(9058571-9058644)
chr2 (555-647)||(2533214-2533306)
chr2 (555-647)||(17823879-17823971)
chr2 (555-647)||(42257284-42257376)
chr2 (555-646)||(13365445-13365536)
chr2 (560-647)||(28381577-28381664)
chr2 (560-647)||(40701569-40701656)
chr2 (553-647)||(41758678-41758772)
chr2 (556-647)||(3738034-3738125)
chr2 (560-647)||(30915554-30915641)
chr2 (556-647)||(38273061-38273151)
chr2 (556-646)||(43490213-43490303)
chr2 (553-646)||(2997402-2997495)
chr2 (553-646)||(38732446-38732539)
chr2 (560-645)||(38882733-38882818)
chr2 (560-647)||(4060776-4060863)
chr2 (560-627)||(5574422-5574489)
chr2 (553-648)||(21301415-21301510)
chr2 (556-644)||(3034901-3034989)
chr2 (560-648)||(15428663-15428750)
chr2 (552-647)||(33436302-33436387)
chr2 (560-621)||(27864808-27864869)
chr2 (556-647)||(26891422-26891513)
chr2 (555-646)||(45097652-45097743)
chr2 (579-648)||(17819944-17820014)
chr2 (605-647)||(41575229-41575271)
chr2 (614-642)||(2329354-2329382)
chr2 (557-613)||(34817819-34817875)
chr2 (551-615)||(43114552-43114616)
[»] chr6 (26 HSPs)
chr6 (199-404)||(11436071-11436276)
chr6 (412-551)||(11434620-11434759)
chr6 (552-648)||(31952944-31953040)
chr6 (560-647)||(11427709-11427796)
chr6 (556-647)||(31976339-31976430)
chr6 (560-647)||(32869769-32869856)
chr6 (560-647)||(17598645-17598732)
chr6 (560-647)||(29857918-29858005)
chr6 (560-647)||(22880580-22880667)
chr6 (556-647)||(31110679-31110770)
chr6 (556-646)||(4231640-4231730)
chr6 (555-646)||(30341277-30341368)
chr6 (552-646)||(15507938-15508032)
chr6 (556-646)||(15989960-15990050)
chr6 (558-647)||(28536408-28536497)
chr6 (558-647)||(30870105-30870193)
chr6 (560-642)||(15832673-15832755)
chr6 (560-647)||(6209388-6209474)
chr6 (586-647)||(23128075-23128136)
chr6 (560-647)||(946467-946554)
chr6 (556-602)||(22421997-22422043)
chr6 (589-646)||(31109351-31109408)
chr6 (554-647)||(12732573-12732665)
chr6 (275-346)||(1100546-1100618)
chr6 (546-584)||(3213390-3213428)
chr6 (519-551)||(11436422-11436454)
[»] chr4 (42 HSPs)
chr4 (552-647)||(29239977-29240072)
chr4 (555-647)||(50052345-50052437)
chr4 (560-647)||(6034135-6034222)
chr4 (560-647)||(41236438-41236525)
chr4 (560-647)||(48182971-48183058)
chr4 (555-643)||(50526088-50526176)
chr4 (556-647)||(41823973-41824064)
chr4 (558-647)||(40574870-40574959)
chr4 (560-647)||(42044289-42044376)
chr4 (553-646)||(19670631-19670724)
chr4 (554-647)||(31910283-31910376)
chr4 (560-647)||(24995029-24995116)
chr4 (554-648)||(28480184-28480278)
chr4 (554-648)||(28481059-28481153)
chr4 (554-648)||(28481934-28482028)
chr4 (556-646)||(55475283-55475373)
chr4 (555-646)||(29547876-29547967)
chr4 (548-646)||(18924405-18924503)
chr4 (560-647)||(23608326-23608413)
chr4 (551-646)||(47986300-47986394)
chr4 (572-647)||(54473467-54473542)
chr4 (573-647)||(480382-480456)
chr4 (557-647)||(48647645-48647735)
chr4 (556-646)||(50813810-50813900)
chr4 (553-646)||(17983658-17983751)
chr4 (553-646)||(29589655-29589748)
chr4 (559-648)||(56300086-56300175)
chr4 (554-647)||(3481745-3481828)
chr4 (559-648)||(47104634-47104723)
chr4 (560-647)||(11511385-11511471)
chr4 (555-646)||(44536663-44536754)
chr4 (560-644)||(53352496-53352572)
chr4 (598-647)||(29234205-29234254)
chr4 (555-646)||(32767050-32767141)
chr4 (558-647)||(29977976-29978065)
chr4 (558-603)||(30036994-30037039)
chr4 (551-615)||(28988468-28988532)
chr4 (597-648)||(32939621-32939672)
chr4 (558-613)||(41327586-41327641)
chr4 (558-627)||(43487814-43487883)
chr4 (554-583)||(32939588-32939617)
chr4 (598-646)||(55079673-55079721)
[»] chr8 (38 HSPs)
chr8 (557-647)||(5957921-5958011)
chr8 (556-647)||(8841350-8841441)
chr8 (553-647)||(42354503-42354597)
chr8 (555-647)||(43414498-43414590)
chr8 (556-647)||(10284549-10284640)
chr8 (560-647)||(12831138-12831225)
chr8 (560-647)||(23122519-23122606)
chr8 (560-647)||(34012218-34012305)
chr8 (556-647)||(37038570-37038661)
chr8 (560-647)||(504043-504130)
chr8 (560-647)||(14548013-14548100)
chr8 (556-647)||(4854781-4854872)
chr8 (560-645)||(42710216-42710301)
chr8 (556-648)||(32707921-32708013)
chr8 (559-647)||(40423864-40423952)
chr8 (560-647)||(9122276-9122363)
chr8 (568-647)||(1179870-1179949)
chr8 (559-646)||(16056322-16056409)
chr8 (560-646)||(24307715-24307801)
chr8 (578-644)||(44507027-44507093)
chr8 (555-647)||(15048098-15048191)
chr8 (554-647)||(15258845-15258938)
chr8 (560-647)||(15197424-15197511)
chr8 (556-647)||(40467791-40467882)
chr8 (560-646)||(30479396-30479482)
chr8 (556-646)||(32032816-32032906)
chr8 (560-646)||(34307308-34307394)
chr8 (558-646)||(17443917-17444005)
chr8 (555-647)||(42221606-42221698)
chr8 (557-647)||(25838280-25838370)
chr8 (598-647)||(20074902-20074951)
chr8 (554-647)||(30183792-30183884)
chr8 (594-646)||(16383469-16383521)
chr8 (568-645)||(14055522-14055599)
chr8 (612-647)||(10621061-10621096)
chr8 (555-593)||(20074869-20074907)
chr8 (510-551)||(40317781-40317822)
chr8 (547-615)||(35181507-35181575)
[»] chr5 (28 HSPs)
chr5 (555-647)||(31009079-31009171)
chr5 (560-647)||(33149560-33149647)
chr5 (554-647)||(2177455-2177548)
chr5 (558-647)||(35943812-35943901)
chr5 (556-647)||(15409528-15409619)
chr5 (560-647)||(2740365-2740452)
chr5 (560-647)||(18520806-18520893)
chr5 (568-647)||(36732872-36732951)
chr5 (560-647)||(40145498-40145585)
chr5 (557-647)||(33825243-33825333)
chr5 (554-647)||(26720607-26720700)
chr5 (554-647)||(26990356-26990449)
chr5 (557-648)||(6679788-6679879)
chr5 (560-647)||(14831905-14831992)
chr5 (560-647)||(35785290-35785377)
chr5 (554-646)||(3921181-3921273)
chr5 (555-646)||(2252085-2252176)
chr5 (565-647)||(13811743-13811825)
chr5 (558-647)||(9603904-9603993)
chr5 (551-647)||(6259914-6260010)
chr5 (555-647)||(20073433-20073525)
chr5 (556-648)||(21370094-21370186)
chr5 (559-647)||(36875537-36875621)
chr5 (555-646)||(39688814-39688905)
chr5 (560-624)||(31132448-31132512)
chr5 (556-647)||(39557432-39557526)
chr5 (560-602)||(16115254-16115296)
chr5 (599-648)||(28177865-28177914)
[»] chr3 (41 HSPs)
chr3 (555-647)||(8076484-8076576)
chr3 (553-647)||(30801648-30801742)
chr3 (552-647)||(20764829-20764924)
chr3 (546-648)||(33118758-33118861)
chr3 (553-647)||(35536717-35536811)
chr3 (556-647)||(11347840-11347931)
chr3 (560-647)||(33644291-33644378)
chr3 (560-647)||(53982102-53982189)
chr3 (556-647)||(14623757-14623848)
chr3 (551-647)||(26141443-26141541)
chr3 (556-647)||(35965700-35965791)
chr3 (553-648)||(43746429-43746524)
chr3 (553-647)||(41189679-41189773)
chr3 (554-647)||(51419276-51419369)
chr3 (547-647)||(26754786-26754886)
chr3 (556-647)||(8956853-8956944)
chr3 (553-648)||(24699870-24699964)
chr3 (560-647)||(31456780-31456867)
chr3 (560-647)||(49607505-49607592)
chr3 (553-647)||(47531956-47532050)
chr3 (560-647)||(36707350-36707437)
chr3 (560-647)||(52629391-52629478)
chr3 (560-647)||(54868817-54868904)
chr3 (553-647)||(13897970-13898064)
chr3 (554-644)||(45058469-45058559)
chr3 (558-647)||(48375626-48375715)
chr3 (560-648)||(9563089-9563177)
chr3 (560-627)||(11095289-11095356)
chr3 (560-647)||(17470496-17470583)
chr3 (556-646)||(36331247-36331337)
chr3 (554-644)||(42823205-42823295)
chr3 (556-647)||(35093676-35093767)
chr3 (552-648)||(1758373-1758466)
chr3 (560-624)||(48587023-48587087)
chr3 (556-647)||(21746106-21746197)
chr3 (560-627)||(27714825-27714892)
chr3 (556-644)||(11140961-11141039)
chr3 (560-648)||(25395256-25395343)
chr3 (561-647)||(39670102-39670188)
chr3 (554-647)||(41080798-41080881)
chr3 (556-604)||(11907501-11907549)
[»] scaffold1268 (1 HSPs)
scaffold1268 (557-647)||(848-938)
[»] scaffold1267 (1 HSPs)
scaffold1267 (557-647)||(848-938)
[»] chr1 (37 HSPs)
chr1 (560-648)||(41758895-41758983)
chr1 (560-647)||(27564657-27564744)
chr1 (556-647)||(32813338-32813429)
chr1 (556-647)||(51898601-51898692)
chr1 (558-647)||(49811447-49811536)
chr1 (560-648)||(9474798-9474886)
chr1 (560-647)||(37649289-37649376)
chr1 (553-643)||(11152293-11152383)
chr1 (567-647)||(50630549-50630629)
chr1 (553-648)||(45044475-45044570)
chr1 (560-647)||(47452242-47452329)
chr1 (560-647)||(48716204-48716291)
chr1 (570-647)||(38632253-38632330)
chr1 (554-646)||(5958916-5959008)
chr1 (560-647)||(43223-43310)
chr1 (560-647)||(2582006-2582093)
chr1 (556-646)||(37926356-37926446)
chr1 (554-644)||(47748536-47748626)
chr1 (556-646)||(50590918-50591008)
chr1 (556-646)||(41608411-41608501)
chr1 (556-647)||(44454070-44454165)
chr1 (560-647)||(3000410-3000497)
chr1 (556-647)||(6260961-6261052)
chr1 (560-647)||(38595245-38595332)
chr1 (558-648)||(23597011-23597101)
chr1 (558-647)||(34339968-34340056)
chr1 (560-647)||(8346309-8346397)
chr1 (556-644)||(44332289-44332377)
chr1 (560-627)||(26274540-26274607)
chr1 (555-647)||(3302450-3302542)
chr1 (556-642)||(7740829-7740915)
chr1 (554-624)||(26440838-26440908)
chr1 (589-647)||(13414852-13414910)
chr1 (605-647)||(44548343-44548385)
chr1 (510-551)||(51308499-51308540)
chr1 (558-610)||(11322298-11322350)
chr1 (558-610)||(11480319-11480371)
[»] chr7 (43 HSPs)
chr7 (556-642)||(41423778-41423864)
chr7 (560-647)||(8080305-8080392)
chr7 (560-647)||(19329933-19330020)
chr7 (560-648)||(4999436-4999524)
chr7 (560-647)||(32951415-32951502)
chr7 (553-647)||(35522967-35523061)
chr7 (556-642)||(46033719-46033805)
chr7 (555-647)||(31735968-31736060)
chr7 (560-647)||(38837308-38837395)
chr7 (560-647)||(40957798-40957885)
chr7 (565-647)||(19436114-19436196)
chr7 (558-647)||(18207270-18207359)
chr7 (555-647)||(21234492-21234584)
chr7 (556-648)||(35468773-35468865)
chr7 (560-646)||(11044270-11044356)
chr7 (557-647)||(16374743-16374833)
chr7 (553-646)||(8238305-8238398)
chr7 (554-647)||(27744225-27744318)
chr7 (567-648)||(35137623-35137704)
chr7 (558-646)||(39255844-39255932)
chr7 (556-646)||(22343453-22343543)
chr7 (556-646)||(38044289-38044379)
chr7 (559-647)||(1766702-1766790)
chr7 (558-646)||(41915833-41915921)
chr7 (576-647)||(3784086-3784157)
chr7 (555-621)||(46374741-46374807)
chr7 (560-624)||(3434666-3434730)
chr7 (560-647)||(7389480-7389566)
chr7 (560-627)||(36362125-36362192)
chr7 (556-642)||(26296740-26296826)
chr7 (586-647)||(3694458-3694519)
chr7 (553-646)||(32564341-32564434)
chr7 (558-646)||(7727998-7728086)
chr7 (556-647)||(12310995-12311086)
chr7 (560-627)||(36361847-36361914)
chr7 (560-647)||(38267131-38267218)
chr7 (557-644)||(2318160-2318249)
chr7 (553-646)||(40846028-40846121)
chr7 (609-647)||(10343534-10343572)
chr7 (605-647)||(36208264-36208306)
chr7 (558-642)||(45223138-45223222)
chr7 (557-644)||(32045931-32046018)
chr7 (556-588)||(36208304-36208336)
[»] scaffold0237 (1 HSPs)
scaffold0237 (560-647)||(4120-4207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (554-642)||(8779-8867)
[»] scaffold0321 (1 HSPs)
scaffold0321 (560-647)||(10031-10118)
[»] scaffold0316 (1 HSPs)
scaffold0316 (553-642)||(17199-17288)
[»] scaffold0018 (1 HSPs)
scaffold0018 (557-646)||(152590-152679)


Alignment Details
Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 5 - 410
Target Start/End: Original strand, 39738273 - 39738683
Alignment:
Q  5 gagtgagatgaaaaaatgacacaacaaatataatgaatgtgccacatggtgacatgatatagtgatgagatgatgatggttgttgttgatgaatttttag 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39738273 gagtgacatgaaaaaatgacacaacaaatataatgaatgtgccacatggtgacatgatatagtgatgagatgatgatggttgttgttgatgaatttttag 39738372  T
Q  105 nnnnnnnnnnatgaagatcgatgacggtgatgttgaagataatgaagaagaa------taaagaaaaaatagtcgttggtggttcaccaaattcaattta 198  Q
              ||||| ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||    
T  39738373 tttttttt--atgaaaatcgatgacggtgatgttgaagataatgaagaagaagaagaataaagaaaaaatagtcgttggtggttcaccaaattcaattta 39738470  T
Q  199 caatttacaataaaccaaaaacagtgatcgaaaagctaaagcaatannnnnnn-accaaattcaaatacatatcaattgagtaaattggatttggaaatg 297  Q
    |||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||| |||||||||||||||||||||    
T  39738471 caatttacaataaaccaaaaacagtgatcgaaaagctaaatcaatattttttttaccaaattcaaatacatatcaatttagtaaattggatttggaaatg 39738570  T
Q  298 aaatgccacacttctcaatagtttcaatttcatggcagtggaatagacatgcttgaaccgattgaaattgagatccaaaaatccattacaaaagtagata 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  39738571 aaatgccacacttctcaatagtttcaatttcatggcagtggaatagacatgcttgaaccgattgaaattgagatctaaaagtccattacaaaagtagata 39738670  T
Q  398 aaatgtaacacta 410  Q
    |||| ||||||||    
T  39738671 aaatataacacta 39738683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 412 - 555
Target Start/End: Original strand, 39738711 - 39738854
Alignment:
Q  412 gcaagtgtggaactcacagagaaggaacgacctgatgatggtaggttggagaagacggagtgtgtaatgtgtttatgagaattgatagaataagataatg 511  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  39738711 gcaagtgtggaacacacagagaaggaacgacctgatgatggtaggttggagaagatggagggtgtaatgtgtttatgagaattgatagaataaaataatg 39738810  T
Q  512 ttttaattgagcatttaaatctcaaccattagcttttaattaaa 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39738811 ttttaattgagcatttaaatctcaaccattagcttttaattaaa 39738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 20700997 - 20700906
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 20700906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 10249304 - 10249391
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtg 10249391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 13438521 - 13438434
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 13438434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 17473198 - 17473111
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtg 17473111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 19930742 - 19930830
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| |||||||||||| ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgt 19930830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 567 - 647
Target Start/End: Original strand, 33436029 - 33436109
Alignment:
Q  567 catagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtg 33436109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 556 - 644
Target Start/End: Complemental strand, 36169018 - 36168930
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| |||||||||||    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagt 36168930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 40613819 - 40613911
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| || || ||||| |||| ||||||| ||||||||||||||    
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtg 40613911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 28863633 - 28863546
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtg 28863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 32505570 - 32505657
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtg 32505657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 7465657 - 7465744
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||  ||||||||||||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtg 7465744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 647
Target Start/End: Complemental strand, 44152108 - 44152018
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| | | |||||| |||||||||||||||||||| |||||||||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtg 44152018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 3440163 - 3440070
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||| ||   |||| ||||||||||||||||||||||||||| ||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtg 3440070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 574 - 647
Target Start/End: Complemental strand, 9058644 - 9058571
Alignment:
Q  574 accctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  9058644 accctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 9058571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 2533306 - 2533214
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||  ||||| ||||||||    
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtg 2533214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 17823971 - 17823879
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||  | | ||||||||||||| |||| |||||||||||||||    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtg 17823879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 42257376 - 42257284
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||| ||||||||||||||||||||   |||||| |||||||||||||| || |||||||| |||||||||||| ||||||||||||||    
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtg 42257284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 646
Target Start/End: Complemental strand, 13365536 - 13365445
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||| |||| |  ||| ||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 13365445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 28381577 - 28381664
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||  | ||||||||||||||| ||||| ||||||||||||||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtg 28381664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 40701656 - 40701569
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtg 40701569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 41758772 - 41758678
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||||||||  |||||||||||||| |||||||||||||||  | ||||||||||||||||||||  ||||||||| ||||    
T  41758772 aaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtg 41758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 3738125 - 3738034
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||| ||   ||||||||| |||||||||||||||| ||||| ||||    
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtg 3738034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 30915641 - 30915554
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtg 30915554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 38273061 - 38273151
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||| ||||||| ||||| |||||||||||||| | ||||||||||||| || ||||||||||||| ||||||| ||||||||||||||    
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtg 38273151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 43490303 - 43490213
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||| ||| | |||||||||||||||| ||| |||||| |||||||    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgt 43490213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 2997402 - 2997495
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||| |||||||||||||||||  |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  2997402 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 2997495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 646
Target Start/End: Complemental strand, 38732539 - 38732446
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||||| |||| |  |||||| ||||||||| | |||| | |||||||||||||||| ||| ||||||||||||||    
T  38732539 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 38732446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 560 - 645
Target Start/End: Original strand, 38882733 - 38882818
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtg 645  Q
    |||| |||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||||| ||||  |||| ||||||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtg 38882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 4060863 - 4060776
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||| ||| | ||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtg 4060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 5574422 - 5574489
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattaggaagagaaaagag 5574489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 553 - 648
Target Start/End: Original strand, 21301415 - 21301510
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| ||||||||| ||| ||||||||||||  ||||||| | |||||||| ||||||||||||||| ||||||| |||  |||||||||||||||    
T  21301415 aaagaaaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgt 21301510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 644
Target Start/End: Original strand, 3034901 - 3034989
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||||| |||| |  |||||||| | ||||||| |||| | |||||||||||||||| ||| ||||||||||||    
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagt 3034989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 15428663 - 15428750
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||| | ||||  |||||||||||||||||| |||||| ||||| |||||| ||||||||| |||||||||| |||||    
T  15428663 aatgttacatagacatcatttaccctcatacacccttgtaca-cccatgtactagaaagagaaaagaggagatgaaagagaaaatgtgt 15428750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 552 - 647
Target Start/End: Complemental strand, 33436387 - 33436302
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||| ||||||||||||||||           |||| |||||||||||||||||||| |||||||||||||||||    
T  33436387 taaaggaaaatgttacatagacaccttttattctcatacacct----------catgaactaggaagagagaagaggataggaaagagaaagtgtg 33436302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 621
Target Start/End: Complemental strand, 27864869 - 27864808
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagaga 621  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  27864869 aatgatacattgacaccctttattctcatacacccttgtacatcccatgtattaggaagaga 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 26891422 - 26891513
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| |||||||| ||| ||||||||  || |||||||  |  | |||||||||||||||| |||||||||||||| ||||    
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtg 26891513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 45097652 - 45097743
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||| ||| | |||| |  ||||||| |||||||| || ||| | |||||||||||||||| ||| ||||||||||||||    
T  45097652 aggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgt 45097743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 648
Target Start/End: Original strand, 17819944 - 17820014
Alignment:
Q  579 ttattctcatacaccctt-gtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||| ||| || ||||||| |||||| |||||||||||||||||||| |||||||||| |||||    
T  17819944 ttattctcataaaccttttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgt 17820014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 647
Target Start/End: Complemental strand, 41575271 - 41575229
Alignment:
Q  605 catgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||| ||||| |||||||||||||| |||||||||||||||    
T  41575271 catgcattaggacgagagaagaggagatgaaagagaaagtgtg 41575229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 614 - 642
Target Start/End: Complemental strand, 2329382 - 2329354
Alignment:
Q  614 ggaagagagaagaggagaggaaagagaaa 642  Q
    |||||||||||||||||||||||||||||    
T  2329382 ggaagagagaagaggagaggaaagagaaa 2329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 613
Target Start/End: Complemental strand, 34817875 - 34817819
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcacta 613  Q
    |||||||||||||  ||||||||||||| || ||  | |||||||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcacta 34817819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 615
Target Start/End: Original strand, 43114552 - 43114616
Alignment:
Q  551 ttaaaggaaaatgttacatagacaccctttattctcatacaccc--ttgtacaccccatgcactagg 615  Q
    |||||||||||||||||||  ||||||||||   ||||||||||  |||||||||||||||| ||||    
T  43114552 ttaaaggaaaatgttacatgaacacccttta--atcatacaccctattgtacaccccatgcattagg 43114616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 1e-92; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 199 - 404
Target Start/End: Complemental strand, 11436276 - 11436071
Alignment:
Q  199 caatttacaataaaccaaaaacagtgatcgaaaagctaaagcaatannnnnnnaccaaattcaaatacatatcaattgagtaaattggatttggaaatga 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  11436276 caatttacaataaaccaaaaacagtgatcgaaaagctaaagcaatatttttttaccaaattcaaatacatatcaattgagtaaattggatttggaaatga 11436177  T
Q  299 aatgccacacttctcaatagtttcaatttcatggcagtggaatagacatgcttgaaccgattgaaattgagatccaaaaatccattacaaaagtagataa 398  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  11436176 aatgccacacttctcaatagtttcaatttcatggtagtggaatagacatgcttgaaccgattgaaattgagatccaaaaatccattacaaaattagatga 11436077  T
Q  399 aatgta 404  Q
    ||||||    
T  11436076 aatgta 11436071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 412 - 551
Target Start/End: Complemental strand, 11434759 - 11434620
Alignment:
Q  412 gcaagtgtggaactcacagagaaggaacgacctgatgatggtaggttggagaagacggagtgtgtaatgtgtttatgagaattgatagaataagataatg 511  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||    
T  11434759 gcaaatgtggaacacacagagaaggaacgacttgatgatggtaggttggagaagatggagggtgtaatgtgtttatgagaattgataaaatatgataatg 11434660  T
Q  512 ttttaattgagcatttaaatctcaaccattagcttttaat 551  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11434659 ttttaattgagcatttaaatctcaaccattagcttttaat 11434620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 552 - 648
Target Start/End: Original strand, 31952944 - 31953040
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31952944 taaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgt 31953040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 11427796 - 11427709
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 11427709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 31976430 - 31976339
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtg 31976339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 32869856 - 32869769
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 32869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 17598732 - 17598645
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 17598645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 29858005 - 29857918
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtg 29857918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 22880580 - 22880667
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||| ||||| ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtg 22880667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 31110679 - 31110770
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||||||||||| || |||||||||||||||| |||| ||||||||||||||    
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtg 31110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 4231730 - 4231640
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 4231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 30341277 - 30341368
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 30341368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 552 - 646
Target Start/End: Original strand, 15507938 - 15508032
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||||||| |||| |  |||||| |||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  15507938 taaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 15508032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 15989960 - 15990050
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 15990050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 28536408 - 28536497
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| |||| | |||||| |||||||||||||||||||||||||| ||||||||| |||||| |||  ||||||||||||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtg 28536497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 30870193 - 30870105
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||| ||  ||||| ||||||||||||||||||||||||||| ||||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtg 30870105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 642
Target Start/End: Complemental strand, 15832755 - 15832673
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||  |||||||||    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaa 15832673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 6209388 - 6209474
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||| ||||||||||| | |||| | ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 6209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 586 - 647
Target Start/End: Original strand, 23128075 - 23128136
Alignment:
Q  586 catacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||    
T  23128075 catacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtg 23128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 946554 - 946467
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||| |||||  |||||| |||||||  |||||||| | |||||| ||||||||||||||||||||| ||||||||||||||    
T  946554 aatgatacattgacactttttattgtcatacattcttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtg 946467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 602
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacac 602  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 589 - 646
Target Start/End: Original strand, 31109351 - 31109408
Alignment:
Q  589 acacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgt 31109408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 12732665 - 12732573
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| | ||||||  ||||||   |||| ||||  ||| ||||| |||||||||||||||| |||||||||| ||||    
T  12732665 aaggaaaatgttacatagacatc-tttatttccatacatttttgtgcaccttatgtactagaaagagagaagaggagatgaaagagaaaatgtg 12732573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 1100546 - 1100618
Alignment:
Q  275 tgagtaaattggatttggaaatgaaatg-ccacacttctcaatagtttcaatttcatggcagtggaatagaca 346  Q
    ||||| ||||||||| |||||| ||||| ||| | ||||||| ||||||||||| |||| |||||||||||||    
T  1100546 tgagtgaattggattcggaaataaaatggccatatttctcaaaagtttcaattttatggtagtggaatagaca 1100618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 584
Target Start/End: Original strand, 3213390 - 3213428
Alignment:
Q  546 tttaattaaaggaaaatgttacatagacaccctttattc 584  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  3213390 tttatttaaaggaaaatgttacataaacaccctttattc 3213428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 519 - 551
Target Start/End: Original strand, 11436422 - 11436454
Alignment:
Q  519 tgagcatttaaatctcaaccattagcttttaat 551  Q
    |||||||||||||||||||| ||||||||||||    
T  11436422 tgagcatttaaatctcaaccgttagcttttaat 11436454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 6e-42; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 552 - 647
Target Start/End: Complemental strand, 29240072 - 29239977
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29240072 taaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 29239977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 50052345 - 50052437
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtg 50052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 6034222 - 6034135
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 6034135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 41236525 - 41236438
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 41236438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 48182971 - 48183058
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtg 48183058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 555 - 643
Target Start/End: Original strand, 50526088 - 50526176
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaag 643  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaag 50526176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 41824064 - 41823973
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtg 41823973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 40574959 - 40574870
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtg 40574870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 42044289 - 42044376
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 42044376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 19670631 - 19670724
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  19670631 aaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 19670724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 31910376 - 31910283
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||| || ||||||||||||||| ||||| ||||||||||||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtg 31910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 24995029 - 24995116
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||||||| ||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtg 24995116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 28480184 - 28480278
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  28480184 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgt 28480278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 28481059 - 28481153
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  28481059 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgt 28481153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 28481934 - 28482028
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  28481934 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgt 28482028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 55475373 - 55475283
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 55475283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 29547876 - 29547967
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| |||||| |||||||    
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgt 29547967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 548 - 646
Target Start/End: Original strand, 18924405 - 18924503
Alignment:
Q  548 taattaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||| |||||||||||||||||||||||| |||| |  ||||||||||| |||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  18924405 taatcaaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 18924503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 23608413 - 23608326
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||| ||||||||| |||||| || |||||||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtg 23608326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 551 - 646
Target Start/End: Complemental strand, 47986394 - 47986300
Alignment:
Q  551 ttaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||||||| || |||  |||||||||||||||| |||||| | |||||||||||||||| | | ||||||||||||||    
T  47986394 ttaaaggaaaatgttacatagacacctttaattg-catacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgt 47986300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 647
Target Start/End: Original strand, 54473467 - 54473542
Alignment:
Q  572 acaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||| ||||| ||||||||    
T  54473467 acaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtg 54473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 573 - 647
Target Start/End: Original strand, 480382 - 480456
Alignment:
Q  573 caccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||| |||||  |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 480456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 48647645 - 48647735
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||| | |||||| | ||||| | |||||||  | ||||||||||||||||||||||||||||||||||||| ||||    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtg 48647735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 50813810 - 50813900
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  |||||||||||||||| | |||| | |||||||||||||||| ||| ||||||||||||||    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 50813900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 17983658 - 17983751
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||| |||||||||||||||||  |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  17983658 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 17983751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 29589655 - 29589748
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||| ||||||||||||| |||| |  ||||||| |||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  29589655 aaaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 29589748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 559 - 648
Target Start/End: Original strand, 56300086 - 56300175
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||| ||||||  |||||||||||||||  |||||||| | ||| || ||| |||||||||||||||||||||||||||||||||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgt 56300175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 3481828 - 3481745
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||| | ||||||||||||||||||    
T  3481828 aaggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtg 3481745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 648
Target Start/End: Complemental strand, 47104723 - 47104634
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||| |||||||  ||||||||| ||||  || ||||||| |||||| || ||||||||||||||||| ||||||||||||||||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgt 47104634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 11511385 - 11511471
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||  ||||||  |||||||||||||||||| |||||| || ||||||||||||| |||| ||||||||||||||    
T  11511385 aatgatacatagacaca-tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtg 11511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 44536663 - 44536754
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||  |||| |  ||||||  ||||||||||| ||| | |||||||||||||||| ||| ||||||||||||||    
T  44536663 aggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgt 44536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 644
Target Start/End: Original strand, 53352496 - 53352572
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    |||| ||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||| |||||||||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacac--------ctaggaagagagaagaggagagaaaagagaaagt 53352572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 647
Target Start/End: Original strand, 29234205 - 29234254
Alignment:
Q  598 tacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 29234254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 646
Target Start/End: Complemental strand, 32767141 - 32767050
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||  |||| |  ||||||||||||||||| | ||| | ||| |||||||| ||| ||| ||||||||||||||    
T  32767141 aggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgt 32767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 29978065 - 29977976
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| | | |||||||  |||||| |||||||||||||| || |||  ||||| ||||| ||| |||||||||||||||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtg 29977976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 30037039 - 30036994
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacacc 603  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||    
T  30037039 aaaatattacatagacaccctttattttcatacatccttgtacacc 30036994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 615
Target Start/End: Original strand, 28988468 - 28988532
Alignment:
Q  551 ttaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactagg 615  Q
    |||||||||||||||||||  |||||||||||||  | ||  | |||||||||||||||||||||    
T  28988468 ttaaaggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagg 28988532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 648
Target Start/End: Original strand, 32939621 - 32939672
Alignment:
Q  597 gtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||| | ||| |||| ||||||||||||||||| ||||||||||||||||    
T  32939621 gtacacacaatgtactaagaagagagaagaggagatgaaagagaaagtgtgt 32939672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 613
Target Start/End: Complemental strand, 41327641 - 41327586
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcacta 613  Q
    ||||||||||||||||||||||||||| || || || |||||||||  ||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcacta 41327586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 627
Target Start/End: Complemental strand, 43487883 - 43487814
Alignment:
Q  558 aaaatgttacatagacaccctttattctca-tacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    ||||||| ||||| |||||||||||| ||| |||||||| ||||||||||| |||||||||| || |||||    
T  43487883 aaaatgtcacataaacaccctttatt-tcagtacaccctggtacaccccatacactaggaagtgaaaagag 43487814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 583
Target Start/End: Original strand, 32939588 - 32939617
Alignment:
Q  554 aaggaaaatgttacatagacaccctttatt 583  Q
    ||||||||||||||||||||||||||||||    
T  32939588 aaggaaaatgttacatagacaccctttatt 32939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 598 - 646
Target Start/End: Original strand, 55079673 - 55079721
Alignment:
Q  598 tacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||| ||||| | |||||||||||||||| ||| ||||||||||||||    
T  55079673 tacacaccatgtattaggaagagagaagagaagaagaaagagaaagtgt 55079721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 6e-39; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 557 - 647
Target Start/End: Complemental strand, 5958011 - 5957921
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtg 5957921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 8841350 - 8841441
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtg 8841441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 42354503 - 42354597
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  42354503 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtg 42354597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 43414498 - 43414590
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtg 43414590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 10284549 - 10284640
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtg 10284640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 12831225 - 12831138
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 12831138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 23122519 - 23122606
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtg 23122606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 34012218 - 34012305
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 34012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 37038661 - 37038570
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtg 37038570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 504043 - 504130
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtg 504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 14548100 - 14548013
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 14548013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 4854781 - 4854872
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||| || ||| ||||||||||||||||| ||||||||||||||    
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtg 4854872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 560 - 645
Target Start/End: Original strand, 42710216 - 42710301
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtg 645  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  42710216 aatgatacacagacaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtg 42710301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 32707921 - 32708013
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgt 32708013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 559 - 647
Target Start/End: Original strand, 40423864 - 40423952
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtg 40423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 9122363 - 9122276
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||  |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 9122276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 1179870 - 1179949
Alignment:
Q  568 atagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||| ||||||||| |||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1179870 atagacatcctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 1179949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 559 - 646
Target Start/End: Original strand, 16056322 - 16056409
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 16056409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 560 - 646
Target Start/End: Original strand, 24307715 - 24307801
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 24307801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 578 - 644
Target Start/End: Original strand, 44507027 - 44507093
Alignment:
Q  578 tttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagt 44507093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 15048098 - 15048191
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggaga-ggaaagagaaagtgtg 647  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||| ||||| || ||||||||||||||||||||   ||||||||||||||    
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtg 15048191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 15258845 - 15258938
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||  |||||||  ||||||| || ||   |||||||||||||||||||||||||||||||| ||||    
T  15258845 aaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtg 15258938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 15197511 - 15197424
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||  ||||||| |||||||||||||||||| |||||| | |||||||| |||||||||| ||||||||||||||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtg 15197424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 40467882 - 40467791
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| ||||| | |||| |   |||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtg 40467791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 646
Target Start/End: Original strand, 30479396 - 30479482
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||| |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 30479482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 32032906 - 32032816
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||  ||||||||||||||    
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgt 32032816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 646
Target Start/End: Complemental strand, 34307394 - 34307308
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 34307308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 558 - 646
Target Start/End: Complemental strand, 17444005 - 17443917
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||||||    ||||| ||||||||| | |||||||| |||||||||||||| ||| ||||||||||||||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgt 17443917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 42221698 - 42221606
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||| ||| ||||||||  ||||||||||||||||||| ||  | | ||||||||||||| |||| |||||||||||||||    
T  42221698 aggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtg 42221606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 647
Target Start/End: Complemental strand, 25838370 - 25838280
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||| | ||||||||  |||||| |||||||||||| || || ||| || |||||||||||||| ||||| ||||||||    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtg 25838280  T

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Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 598 - 647
Target Start/End: Original strand, 20074902 - 20074951
Alignment:
Q  598 tacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  20074902 tacacctcatgaactaggaagagagaagagaagaggaaagagaaagtgtg 20074951  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 30183792 - 30183884
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||||||| ||||||||  ||||||| ||||||||||||||  | | |||||| |||||| || | |||||||||||||||    
T  30183792 aaggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaagatga-atgaaagagaaagtgtg 30183884  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 646
Target Start/End: Complemental strand, 16383521 - 16383469
Alignment:
Q  594 cttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 16383469  T

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Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 645
Target Start/End: Original strand, 14055522 - 14055599
Alignment:
Q  568 atagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtg 645  Q
    ||||||||  |||||||||||||||| ||||| ||| ||| || || ||||||||||||  |||||||||| ||||||    
T  14055522 atagacactatttattctcatacacctttgtatacctcattcattaagaagagagaagatcagaggaaagaaaaagtg 14055599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 647
Target Start/End: Original strand, 10621061 - 10621096
Alignment:
Q  612 taggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10621061 taggaagagagaagaggagagaaaagagaaagtgtg 10621096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 593
Target Start/End: Original strand, 20074869 - 20074907
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacc 593  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  20074869 aggaaaatgttacatagacacattttattctcatacacc 20074907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 40317781 - 40317822
Alignment:
Q  510 tgttttaattgagcatttaaatctcaaccattagcttttaat 551  Q
    ||||||||| |||||||||||||||||||||||  |||||||    
T  40317781 tgttttaatagagcatttaaatctcaaccattaatttttaat 40317822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 615
Target Start/End: Original strand, 35181507 - 35181575
Alignment:
Q  547 ttaattaaaggaaaatgttacatagacaccctttattctcatacaccc--ttgtacaccccatgcactagg 615  Q
    |||| ||||||||||||||||||  ||||||||||   ||||||||||  |||||||||||||||| ||||    
T  35181507 ttaaataaaggaaaatgttacatgaacacccttta--atcatacaccctattgtacaccccatgcattagg 35181575  T

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Target: chr5 (Bit Score: 81; Significance: 9e-38; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 31009171 - 31009079
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtg 31009079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 33149560 - 33149647
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 33149647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 2177548 - 2177455
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtg 2177455  T

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Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 35943812 - 35943901
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtg 35943901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 15409528 - 15409619
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtg 15409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 2740452 - 2740365
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtg 2740365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 18520806 - 18520893
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtg 18520893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 36732872 - 36732951
Alignment:
Q  568 atagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtg 36732951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 40145585 - 40145498
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtg 40145498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 33825243 - 33825333
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtg 33825333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 26720700 - 26720607
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||||||| | |||||||||||||||||| ||||||||||| || |||||||||||||||| |||| ||||||||||||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtg 26720607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 26990449 - 26990356
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||||||| | |||||||||||||||||| ||||||||||| || |||||||||||||||| |||| ||||||||||||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtg 26990356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 648
Target Start/End: Complemental strand, 6679879 - 6679788
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||| || || ||||||||||||||||||||| ||||||||| |||||    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgt 6679788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 14831992 - 14831905
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtg 14831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 35785377 - 35785290
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtg 35785290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 554 - 646
Target Start/End: Original strand, 3921181 - 3921273
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 3921273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 2252085 - 2252176
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 2252176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 565 - 647
Target Start/End: Complemental strand, 13811825 - 13811743
Alignment:
Q  565 tacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||  |||||||||||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtg 13811743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 9603993 - 9603904
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||| |||||||| |||||||||||||||| ||||||| |||| |||||| |||||||||||| || | |||||||||||||||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtg 9603904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 551 - 647
Target Start/End: Original strand, 6259914 - 6260010
Alignment:
Q  551 ttaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||| | |||||||||  |||||| |||||||| ||||| || |||  ||||||||||||||| |||||||||||||||    
T  6259914 ttaaaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtg 6260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 20073433 - 20073525
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| |||||||   |||||||||||||||| ||||| | | |||| ||||||||||||||||||||||||||| ||||||||||    
T  20073433 aggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtg 20073525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 648
Target Start/End: Complemental strand, 21370186 - 21370094
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| |  ||  |||||||||| |||||| ||||||||||||||| |||||    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgt 21370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 559 - 647
Target Start/End: Original strand, 36875537 - 36875621
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||| ||||||    | ||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||    
T  36875537 aaatgttacatagacaccatttatt----tccacccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtg 36875621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 555 - 646
Target Start/End: Original strand, 39688814 - 39688905
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||| |||| |  |||||||| |||||||||| ||| | |||||||||||||||  ||| ||||||||||||||    
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgt 39688905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 560 - 624
Target Start/End: Complemental strand, 31132512 - 31132448
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaa 624  Q
    |||| |||||| |||||||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattagaaagagagaa 31132448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 39557432 - 39557526
Alignment:
Q  556 ggaaaatgttacataga--cacccttt-attctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||| ||||||  |||||||| ||||||||| | || |||||||| |||| | ||||||||||||||||||||  ||||||||||||||    
T  39557432 ggaaaatgtttcatagatacacccttttattctcatagatccatgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtg 39557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 602
Target Start/End: Original strand, 16115254 - 16115296
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacac 602  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  16115254 aatgatacatagacaccctttattctcatacactcttgtacac 16115296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 648
Target Start/End: Complemental strand, 28177914 - 28177865
Alignment:
Q  599 acaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||| || ||||||||| ||||||||||| |||||||||||||||    
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgt 28177865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 9e-38; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 8076576 - 8076484
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 8076484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 30801648 - 30801742
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  30801648 aaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtg 30801742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 552 - 647
Target Start/End: Original strand, 20764829 - 20764924
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||    
T  20764829 taaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtg 20764924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 546 - 648
Target Start/End: Original strand, 33118758 - 33118861
Alignment:
Q  546 tttaattaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaa-gaggagaggaaagagaaagt 644  Q
    |||||||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  33118758 tttaattataggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagt 33118857  T
Q  645 gtgt 648  Q
    ||||    
T  33118858 gtgt 33118861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 35536811 - 35536717
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||    
T  35536811 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtg 35536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 11347840 - 11347931
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtg 11347931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 33644378 - 33644291
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 33644291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 53982189 - 53982102
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 53982102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 14623757 - 14623848
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||| |||||||||||| ||| |||||||||||||||    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtg 14623848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 551 - 647
Target Start/End: Original strand, 26141443 - 26141541
Alignment:
Q  551 ttaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagag--agaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| || |||||||||  |||||||||||| ||||||||||||||    
T  26141443 ttaaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtg 26141541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 35965700 - 35965791
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||| | || ||| ||| |||||||||||||||||||||||||    
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtg 35965791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 553 - 648
Target Start/End: Complemental strand, 43746524 - 43746429
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| ||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||    
T  43746524 aaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgt 43746429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 41189679 - 41189773
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||| |||| || |||||||| |||||||||||| ||||||||||||||    
T  41189679 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtg 41189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 51419276 - 51419369
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||| ||||| ||||||  |||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtg 51419369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 547 - 647
Target Start/End: Complemental strand, 26754886 - 26754786
Alignment:
Q  547 ttaattaaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||| ||||||||||||||||||||||| |||||||  |||||||| |||||||||| ||   |||||||||||||||||||||||||||||||| |||    
T  26754886 ttaataaaaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgt 26754787  T
Q  647 g 647  Q
    |    
T  26754786 g 26754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 8956944 - 8956853
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||  ||||||||||||||||||||| ||| ||||||| |||||||    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtg 8956853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 553 - 648
Target Start/End: Original strand, 24699870 - 24699964
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||||||| | |||||||||||||| | || |||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  24699870 aaaggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgt 24699964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 31456867 - 31456780
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||| ||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtg 31456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 49607592 - 49607505
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| |||||||||||||||||  |||||| |||||||||| |||||||||| ||||||||||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtg 49607505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 47532050 - 47531956
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||  |||| || ||||||||||||| ||||||| ||||||||||||||    
T  47532050 aaaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtg 47531956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 36707350 - 36707437
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||| ||||||  |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtg 36707437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 52629478 - 52629391
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtg 52629391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 54868817 - 54868904
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtg 54868904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 13897970 - 13898064
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||| ||||||||| |||||||||||||||  || |||||||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  13897970 aaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtg 13898064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 554 - 644
Target Start/End: Original strand, 45058469 - 45058559
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||||||| | |||||||||||||||| ||| ||||||||||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagt 45058559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 48375626 - 48375715
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||  |||||| | |||||||||| ||   |||||||||||||||||||||||||||||||| ||||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtg 48375715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 560 - 648
Target Start/End: Complemental strand, 9563177 - 9563089
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| |||||||| ||||||||||| |||||||| ||||||| | |||||| ||||||||||||||||||||| | |||||||||||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgt 9563089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 11095289 - 11095356
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagagaaaagag 11095356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 17470583 - 17470496
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||||||||||   ||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtg 17470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 36331247 - 36331337
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||| ||| | |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  36331247 ggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 36331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 554 - 644
Target Start/End: Complemental strand, 42823295 - 42823205
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||||||| |||| |  |||||||||||||||||| |||| | |||||||||||||||| | | ||||||||||||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagt 42823205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 35093767 - 35093676
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| |||||| | |||||||||||||||| ||||||| | |||||||||||||||||||| |  ||| | |||||||||||||    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtg 35093676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 552 - 648
Target Start/End: Original strand, 1758373 - 1758466
Alignment:
Q  552 taaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||| ||||||||||||| ||||  |||||||  ||||||| |||||||||| ||||| |||||||||||||||||||| |||||||||| |||||    
T  1758373 taaagaaaaatgttacataaacactgtttattc--atacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgt 1758466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 624
Target Start/End: Original strand, 48587023 - 48587087
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaa 624  Q
    |||| |||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagagagaa 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 21746106 - 21746197
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||| |||||| |||| | ||||||  |||||||||||||||||| |||  | | ||||||||||||| |||| |||||||||||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtg 21746197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 27714825 - 27714892
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| |||||| |||| |||||||||| ||||||||||||||||||||| | | ||||||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatgtattgggaagagagaagag 27714892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 644
Target Start/End: Original strand, 11140961 - 11141039
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    |||||||||||||||||||||||||| |||||          ||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  11140961 ggaaaatgttacatagacaccctttagtctca----------tacaccccatgtactaggaagagagaaaaggagatgaaagagaaagt 11141039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 25395256 - 25395343
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||| | ||||| |||||||| | ||||||| |||||| ||||| |||||| ||||| ||| |||||||||| |||||    
T  25395256 aatgttacatagacatcttttatcctcatacatctttgtaca-cccatgtactagaaagagaaaagagaagatgaaagagaaaatgtgt 25395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 39670188 - 39670102
Alignment:
Q  561 atgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||| ||||| | ||||||  | |||||||||||||| | ||| || || |||||||||||||||||| |||||| |||||||    
T  39670188 atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtg 39670102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 41080881 - 41080798
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| | |||| |||||||||||||||||||          ||| |||||||||||||||||||||| |||||||||| ||||    
T  41080881 aaggaaaatgttacacaaacactctttattctcatacaccct----------atgtactaggaagagagaagaggagatgaaagagaaaatgtg 41080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 11907549 - 11907501
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccc 604  Q
    |||||||||||||||||||||||||||| ||||||| | |||| |||||    
T  11907549 ggaaaatgttacatagacaccctttattttcatacatctttgtccaccc 11907501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 848 - 938
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 848 - 938
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 560 - 648
Target Start/End: Complemental strand, 41758983 - 41758895
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgt 41758895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 27564657 - 27564744
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 27564744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 32813429 - 32813338
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtg 32813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 51898601 - 51898692
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtg 51898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 49811447 - 49811536
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||| ||||||||||||||    
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtg 49811536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 9474798 - 9474886
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgt 9474886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 37649376 - 37649289
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtg 37649289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 553 - 643
Target Start/End: Original strand, 11152293 - 11152383
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaag 643  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  11152293 aaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaag 11152383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 567 - 647
Target Start/End: Complemental strand, 50630629 - 50630549
Alignment:
Q  567 catagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtg 50630549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 553 - 648
Target Start/End: Original strand, 45044475 - 45044570
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||| |||||    
T  45044475 aaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgt 45044570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 47452242 - 47452329
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtg 47452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 48716204 - 48716291
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtg 48716291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 38632253 - 38632330
Alignment:
Q  570 agacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtg 38632330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 554 - 646
Target Start/End: Original strand, 5958916 - 5959008
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||||  |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 5959008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 43310 - 43223
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||| |||||||||||| |||||| ||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtg 43223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 2582093 - 2582006
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||| |||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||| ||| ||||||||||    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtg 2582006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 37926356 - 37926446
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||| ||| ||||||||| ||||||| |||||| ||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgt 37926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 554 - 644
Target Start/End: Complemental strand, 47748626 - 47748536
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||||||| |||| |  ||||||| ||||||||||||||| | |||||||||||||||| ||| ||||||||||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagt 47748536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 50590918 - 50591008
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||| ||| |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 50591008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 646
Target Start/End: Original strand, 41608411 - 41608501
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||| ||| | |||||||||||||||| ||| ||||||||||||||    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgt 41608501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 44454165 - 44454070
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtac----accccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||    |||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtg 44454070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 3000497 - 3000410
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||  | ||||||||||||||| ||||| ||||||||||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtg 3000410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 6261052 - 6260961
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||||| ||  ||||| |||||||||||||||| |||| ||||| ||||    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtg 6260961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 38595332 - 38595245
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||  | ||||||||||||||| ||||| ||||||||||||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtg 38595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 558 - 648
Target Start/End: Original strand, 23597011 - 23597101
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||||||||||||||   |||||||||||||| ||||| ||||| |||| |||||||| |||||| ||||||| ||||| |||||||||    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgt 23597101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 34339968 - 34340056
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||| |||||||||||||| |||| ||| ||||| ||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtg 34340056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 8346309 - 8346397
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagag-agaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||| | ||| |||||||||||||||| |||||||| ||||||| ||||||||| | |||||||||| ||||||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtg 8346397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 644
Target Start/End: Original strand, 44332289 - 44332377
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||| ||| |||| |  ||||||||||||||||| | ||| | |||||||||||||||| ||| ||||||||||||    
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagt 44332377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 627
Target Start/End: Complemental strand, 26274607 - 26274540
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| |||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaagag 26274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 555 - 647
Target Start/End: Original strand, 3302450 - 3302542
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||| ||| ||||||||  ||||||||||||||||||| ||  | | ||||||||||||| |||| |||| ||||||||||    
T  3302450 aggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtg 3302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 642
Target Start/End: Complemental strand, 7740915 - 7740829
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    |||| |||| |||| || ||||||||||||| |||| | ||||||| ||||||||  ||||||||||||||||||| |||| |||||    
T  7740915 ggaagatgtcacatggataccctttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaa 7740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 624
Target Start/End: Complemental strand, 26440908 - 26440838
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaa 624  Q
    ||||||||||||||||| ||| |||||||||  |||||||||||||||  |||| || || ||||||||||    
T  26440908 aaggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 13414910 - 13414852
Alignment:
Q  589 acacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||| |||||| ||||||| ||||||||||||||| || || ||||||||| ||||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtg 13414852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 647
Target Start/End: Original strand, 44548343 - 44548385
Alignment:
Q  605 catgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||    
T  44548343 catgcattaggaagagagaagaagagagaaaagagaaagtgtg 44548385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 51308499 - 51308540
Alignment:
Q  510 tgttttaattgagcatttaaatctcaaccattagcttttaat 551  Q
    ||||||||| |||||||||||||||| ||||||| |||||||    
T  51308499 tgttttaatagagcatttaaatctcagccattagtttttaat 51308540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 11322298 - 11322350
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgca 610  Q
    ||||||||||||||| | |||||||||| ||| |||||| |||||| ||||||    
T  11322298 aaaatgttacatagagatcctttattctgatatacccttctacacctcatgca 11322350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 11480319 - 11480371
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgca 610  Q
    ||||||||||||||| | |||||||||| ||| |||||| |||||| ||||||    
T  11480319 aaaatgttacatagagatcctttattctgatatacccttctacacctcatgca 11480371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 556 - 642
Target Start/End: Complemental strand, 41423864 - 41423778
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaa 41423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 8080305 - 8080392
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtg 8080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 19330020 - 19329933
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 19329933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 4999436 - 4999524
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgt 4999524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 32951415 - 32951502
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtg 32951502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 35523061 - 35522967
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||    
T  35523061 aaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtg 35522967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 556 - 642
Target Start/End: Original strand, 46033719 - 46033805
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaa 46033805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 31736060 - 31735968
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||||| ||| ||||||| |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtg 31735968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 38837395 - 38837308
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 38837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 40957885 - 40957798
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtg 40957798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 565 - 647
Target Start/End: Original strand, 19436114 - 19436196
Alignment:
Q  565 tacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtg 19436196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 647
Target Start/End: Complemental strand, 18207359 - 18207270
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||| | || ||||||||||||||||||||||| |||||||||||||||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtg 18207270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 555 - 647
Target Start/End: Complemental strand, 21234584 - 21234492
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||| | |||||||| |||||||| ||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtg 21234492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 35468773 - 35468865
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    ||||||||||||||| ||||| |||||||||||||| |||| |||| | |||| |||||||||||||||||||| ||||||||||||||||||    
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgt 35468865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 560 - 646
Target Start/End: Complemental strand, 11044356 - 11044270
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgt 11044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 16374743 - 16374833
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||| || ||||||||||||| | |||| ||||||||| |||||    
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtg 16374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 553 - 646
Target Start/End: Complemental strand, 8238398 - 8238305
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| || |||| |  ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  8238398 aaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgt 8238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 27744225 - 27744318
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||| ||| ||||| ||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtg 27744318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 567 - 648
Target Start/End: Complemental strand, 35137704 - 35137623
Alignment:
Q  567 catagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgt 648  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  35137704 catagataccatttgttctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgt 35137623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 558 - 646
Target Start/End: Original strand, 39255844 - 39255932
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||||||||| |||||||||||||||||  | || |||  |||||||||||||||||| ||||||||||||||    
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgt 39255932  T

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Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 22343543 - 22343453
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 22343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 646
Target Start/End: Complemental strand, 38044379 - 38044289
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||| | |||||||||| ||||| ||| ||||||||||||||    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgt 38044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 559 - 647
Target Start/End: Original strand, 1766702 - 1766790
Alignment:
Q  559 aaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||| |||| |||||||| || |||||| ||| |||  |||| |||||||||||||||||||||||||||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtg 1766790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 558 - 646
Target Start/End: Complemental strand, 41915921 - 41915833
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgt 41915833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 576 - 647
Target Start/End: Complemental strand, 3784157 - 3784086
Alignment:
Q  576 cctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  3784157 cctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 3784086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 46374741 - 46374807
Alignment:
Q  555 aggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagaga 621  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 624
Target Start/End: Complemental strand, 3434730 - 3434666
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaa 624  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 7389566 - 7389480
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||| ||||||||| |||||||||| |||||||||||| | ||||||||||||  ||||||| ||||||||||||||    
T  7389566 aatgatacatagacatcctttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtg 7389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 627
Target Start/End: Complemental strand, 36362192 - 36362125
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagagaaaagag 36362125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 556 - 642
Target Start/End: Complemental strand, 26296826 - 26296740
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    |||||||||||| |||||||| | ||||  |||||||||||||||||| ||| || || |||||||||||||||||| |||||||||    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaa 26296740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 586 - 647
Target Start/End: Complemental strand, 3694519 - 3694458
Alignment:
Q  586 catacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  3694519 catacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtg 3694458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 32564341 - 32564434
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||| ||||||||||||||   |||| |  |||||||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||    
T  32564341 aaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 32564434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 558 - 646
Target Start/End: Complemental strand, 7728086 - 7727998
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    ||||||||||||||||||| |||| |  |||||| |||||||||||||||  | |||||||||||||||| ||| |||| |||||||||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgt 7727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 12311086 - 12310995
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||| |   |  |||||||||||||||||||| |||||||| ||| ||||    
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtg 12310995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 36361847 - 36361914
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagag 627  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||| | |||||||||| |||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtacattccatgtattaggaagagaaaagag 36361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 38267218 - 38267131
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||| | | ||||||  |||||||| | ||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  38267218 aatgatacatagatatcatttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtg 38267131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 644
Target Start/End: Original strand, 2318160 - 2318249
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactag-ga-agagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||| |||||||  |||||||| |||||||| ||||||| ||| || |||||||||| |||| ||||||||||||    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagt 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 40846028 - 40846121
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||| ||| |||| |  |||||||||||||||| | |||    |||||||||||||||| ||| ||||||||||||||    
T  40846028 aaaggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgt 40846121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 647
Target Start/End: Original strand, 10343534 - 10343572
Alignment:
Q  609 cactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10343534 cactaggaagagagaagaggagaggaaagagaaagtgtg 10343572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 647
Target Start/End: Complemental strand, 36208306 - 36208264
Alignment:
Q  605 catgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  36208306 catgcactaggaagagagaagaggagaggaaagagaaaatgtg 36208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 642
Target Start/End: Complemental strand, 45223222 - 45223138
Alignment:
Q  558 aaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    ||||||| ||||||||| ||||||||  |||||| | |||||||||||||  | | | ||||||||||| |||| ||||||||||    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaa 45223138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 644
Target Start/End: Complemental strand, 32046018 - 32045931
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagt 644  Q
    ||||||||||||||||||  |||||||  |||||||||||||||| | |||  | | | ||||||||||| |||| |||| |||||||    
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaagt 32045931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 588
Target Start/End: Complemental strand, 36208336 - 36208304
Alignment:
Q  556 ggaaaatgttacatagacaccctttattctcat 588  Q
    |||||||||||||||||||||||||||| ||||    
T  36208336 ggaaaatgttacatagacaccctttattttcat 36208304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 4207 - 4120
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtg 4120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 554 - 642
Target Start/End: Original strand, 8779 - 8867
Alignment:
Q  554 aaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||  | ||||||||||||||| | |||||||||||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaa 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 10031 - 10118
Alignment:
Q  560 aatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtg 647  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtg 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 553 - 642
Target Start/End: Complemental strand, 17288 - 17199
Alignment:
Q  553 aaaggaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaa 642  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||  ||   ||||||||||||||||||||||||||||||||    
T  17288 aaaggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaa 17199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 557 - 646
Target Start/End: Complemental strand, 152679 - 152590
Alignment:
Q  557 gaaaatgttacatagacaccctttattctcatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgt 646  Q
    |||||||||||||||||||| |||| |  |||||||||||||||| |||||| | ||| |||||||||||| ||| ||||||||||||||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgt 152590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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