View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2897_low_4 (Length: 426)

Name: NF2897_low_4
Description: NF2897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2897_low_4
NF2897_low_4
[»] chr1 (12 HSPs)
chr1 (18-421)||(47713296-47713699)
chr1 (18-421)||(47745879-47746282)
chr1 (18-421)||(47718090-47718490)
chr1 (66-421)||(47760211-47760561)
chr1 (219-376)||(6512957-6513114)
chr1 (214-381)||(6507051-6507218)
chr1 (221-368)||(6517364-6517511)
chr1 (249-375)||(6521552-6521678)
chr1 (219-340)||(6500263-6500384)
chr1 (267-373)||(6523572-6523678)
chr1 (219-316)||(47777840-47777937)
chr1 (216-323)||(47772876-47772983)
[»] scaffold0341 (2 HSPs)
scaffold0341 (214-381)||(1076-1243)
scaffold0341 (214-381)||(8730-8897)
[»] chr5 (4 HSPs)
chr5 (211-414)||(28861829-28862032)
chr5 (211-414)||(28856552-28856755)
chr5 (234-414)||(28831356-28831536)
chr5 (219-352)||(27371748-27371881)


Alignment Details
Target: chr1 (Bit Score: 392; Significance: 0; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 18 - 421
Target Start/End: Complemental strand, 47713699 - 47713296
Alignment:
Q  18 tttcatatccaaagcttcaatcatccactacttaataacctgttcttgttccaagacagagatcaatatatcagaatgacaattgtttctagcaagctat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47713699 tttcatatccaaagcttcaatcatccactacttaataacctgttcttgttccaagacagagatcaatatatcagaatgacaattgtttctagcaagctat 47713600  T
Q  118 tattttccttttactcttttctcctttttattatcattatcgtatctcaagcccagggccaaccagattttgtgcgctactcttgtttaaacaataatgg 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47713599 tattttccttttactcttttctcctttttattatcattatcgtatctcaagcccagggccaaccagattttgtgcgctactcttgtataaacaataatgg 47713500  T
Q  218 caactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctct 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47713499 caactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacggtttctacaatttctct 47713400  T
Q  318 tatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttcatc 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  47713399 tatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttcttc 47713300  T
Q  418 tcac 421  Q
    ||||    
T  47713299 tcac 47713296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 421
Target Start/End: Complemental strand, 47746282 - 47745879
Alignment:
Q  18 tttcatatccaaagcttcaatcatccactacttaataacctgttcttgttccaagacagagatcaatatatcagaatgacaattgtttctagcaagctat 117  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  47746282 tttcatatccaaagcttcaatcctccatttcttaattacctgttcttgttccaagacagagatcaatatatcacaatgacaattgtatctagcaagctat 47746183  T
Q  118 tattttccttttactcttttctcctttttattatcattatcgtatctcaagcccagggccaaccagattttgtgcgctactcttgtttaaacaataatgg 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||| |||| |||||||||||||    
T  47746182 tattttccctttactcttttctcctttttattatcattatcgtatctcaagcccaaggccaaccaaattttttgcgcaactattgtataaacaataatgg 47746083  T
Q  218 caactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctct 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47746082 caactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacggtttctacaatttctct 47745983  T
Q  318 tatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttcatc 417  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||| ||||||||||||| ||    
T  47745982 tatggccaaaacactgataaagtaaacgccattggactctgcagaggagatgttaaacccgacctttgccgcagttgtctcaacgattcaagagttcttc 47745883  T
Q  418 tcac 421  Q
    ||||    
T  47745882 tcac 47745879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 421
Target Start/End: Complemental strand, 47718490 - 47718090
Alignment:
Q  18 tttcatatccaaagcttcaatcatccactacttaataacctgttcttgttccaagacagagatcaatatatcagaatgacaattgtttctagcaagctat 117  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  47718490 tttcatatccaaagcttcaatcctccatttcttaattacctgttcttgttccaagacagagatcaatatacacgaatgacaactgtttctagcaagctat 47718391  T
Q  118 tattttccttttactcttttctcctttttattatcattatcgtatctcaagcccagggccaaccagattttgtgcgctactcttgtttaaacaataatgg 217  Q
    ||||||||||||| ||| ||||   |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||| |||| |||||||||||||    
T  47718390 tattttccttttattctgttct---ttttattatcattatcgtatctcaagcccaaggccaaccaaattttttgcgcaactattgtataaacaataatgg 47718294  T
Q  218 caactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctct 317  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||  ||||||||||||| |||||||||||||||    
T  47718293 caactacacagccaatagcacctatcaaaacaacctcagcacccttttgtccaatctaacttccaacacagaaatcaactacggtttctacaatttctct 47718194  T
Q  318 tatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttcatc 417  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||    
T  47718193 tatggccaaaacactgacaaagtaaacgccgttggcctctgcagaggagatgttaaacctgacgtttgccgaagttgtctcaatgattcaagagttcttc 47718094  T
Q  418 tcac 421  Q
    ||||    
T  47718093 tcac 47718090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 66 - 421
Target Start/End: Complemental strand, 47760561 - 47760211
Alignment:
Q  66 ttccaagacagagatcaatatatcagaatgacaattgtttctagcaagctattattttccttttactcttttctcctttttattatcattatcgtatctc 165  Q
    |||||||||||||| ||||||  ||| ||| ||||||||||| ||||| ||||| || ||||||| ||||||||| || | ||||   ||   |||||||    
T  47760561 ttccaagacagagagcaatat--cagcatggcaattgtttcttgcaagttattacttaccttttattcttttctctttctcattactttt---gtatctc 47760467  T
Q  166 aagcccagggccaaccagattttgtgcgctactcttgtttaaacaataatggcaactacacagccaatagcacctatcaaaacaacctcaacaccctttt 265  Q
    ||||| | | |||||| |||||| ||  | ||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47760466 aagccaaagcccaacctgattttctgtacaacttttgtaaaaacgataatggcaactacacagccaatagcacctatcaaaacaacctcaacaccgtttt 47760367  T
Q  266 atccaatctcacttccaacactcaaatcaactacgggttctacaatttctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagagga 365  Q
     |||||||| ||||||||| |  ||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  47760366 gtccaatctaacttccaacgcagaaatcaactacggtttctacaatatttcttatggccaaaacactgacaaagtaaacgccattggactctgtagagga 47760267  T
Q  366 gatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttcatctcac 421  Q
    ||||||||||| || |||||||||||| ||||||| ||||||||||||| ||||||    
T  47760266 gatgttaaacccgacgtttgccgcagttgtctcaacgattcaagagttcttctcac 47760211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 376
Target Start/End: Complemental strand, 6513114 - 6512957
Alignment:
Q  219 aactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctctt 318  Q
    ||||||||| |||| ||||||||||| || ||||| ||||||||| |||||| ||||||||||||||   | ||||||||||| ||||| |||| |||||    
T  6513114 aactacacaaccaacagcacctatcacaaaaaccttaacacccttctatccactctcacttccaacaaagatatcaactacggtttctataattcctctt 6513015  T
Q  319 atggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacc 376  Q
    ||||   ||||||||||||||||||||| |||||||| || ||||||||||| |||||    
T  6513014 atggaataaacaccgacaaagtaaacgctattggactttgtagaggagatgtcaaacc 6512957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 381
Target Start/End: Complemental strand, 6507218 - 6507051
Alignment:
Q  214 atggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaattt 313  Q
    |||| ||||||||| |||| |||||||| || |  |||||||| |||||| |||||| ||||||||||||||   | || |||||||| ||||| ||||     
T  6507218 atggtaactacacaaccaacagcacctaccacacaaacctcaaaacccttctatccactctcacttccaacaaagatattaactacggtttctataattc 6507119  T
Q  314 ctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatg 381  Q
    ||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||| ||||    
T  6507118 ctcttatggcgtaaacaccgacaaagtaaacgctattggactgtgtagaggagatgtcaaacccgatg 6507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 6517511 - 6517364
Alignment:
Q  221 ctacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctcttat 320  Q
    ||||||| |||| |||||||| || |  ||||| |||||||||||||||| ||||||||||||||   ||||||||||||| ||||| || | |||||||    
T  6517511 ctacacaaccaacagcacctaccacacaaaccttaacacccttttatccattctcacttccaacaaagaaatcaactacggtttctataactcctcttat 6517412  T
Q  321 ggccaaaacaccgacaaagtaaacgccattggactctgcagaggagat 368  Q
    |||  ||||| ||||||||||||||| |||||||| ||||||||||||    
T  6517411 ggcataaacagcgacaaagtaaacgcaattggactatgcagaggagat 6517364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 375
Target Start/End: Original strand, 6521552 - 6521678
Alignment:
Q  249 aacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctcttatggccaaaacaccgacaaagtaaacgcca 348  Q
    ||||| |||||||||||||||| ||||||||||||||   | ||||||||||| ||||| |||| |||||||||  | ||||| |||||||||||||| |    
T  6521552 aaccttaacacccttttatccactctcacttccaacaaagatatcaactacggtttctataattcctcttatggaaacaacactgacaaagtaaacgcga 6521651  T
Q  349 ttggactctgcagaggagatgttaaac 375  Q
    ||||||| || ||||||||||| ||||    
T  6521652 ttggactatgtagaggagatgtcaaac 6521678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 6500384 - 6500263
Alignment:
Q  219 aactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctctt 318  Q
    ||||||||| | |||||||||||| | || ||||||||||| |||||||| | |||||||||||||||  ||||||||||||| ||||||||||| ||      
T  6500384 aactacacaacaaatagcacctatgacaaaaacctcaacacacttttatcaactctcacttccaacacagaaatcaactacggtttctacaatttttcac 6500285  T
Q  319 atggccaaaacaccgacaaagt 340  Q
    ||||| |||||| |||||||||    
T  6500284 atggcgaaaacagcgacaaagt 6500263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 373
Target Start/End: Original strand, 6523572 - 6523678
Alignment:
Q  267 tccaatctcacttccaacactcaaatcaactacgggttctacaatttctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggag 366  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||  | ||  |||||||  ||||||||||||| ||||| || |||||||| |    
T  6523572 tccactctcacttccaacacgcaaatcaactacggtttctacaatttctcaaacggtgaaaacacaaacaaagtaaacgcaattggtctttgcagaggcg 6523671  T
Q  367 atgttaa 373  Q
    |||||||    
T  6523672 atgttaa 6523678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 47777840 - 47777937
Alignment:
Q  219 aactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctc 316  Q
    ||||||||| | || ||||||||  |||  ||||||||||| |||||||||| ||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  47777840 aactacacaacaaacagcacctacgaaacaaacctcaacacacttttatccactctcatttccaacacacaaatcaattacggtttctacaatttctc 47777937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 47772876 - 47772983
Alignment:
Q  216 ggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttct 315  Q
    |||||||||||| |||||||||||||| | |||||||| || || ||||| |||| |||  ||||  | ||  ||||||||||||| |||||||||||||    
T  47772876 ggcaactacacatccaatagcacctatgacaacaaccttaaaactcttttgtccagtctttcttctcatacagaaatcaactacggtttctacaatttct 47772975  T
Q  316 cttatggc 323  Q
    | ||||||    
T  47772976 catatggc 47772983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 381
Target Start/End: Complemental strand, 1243 - 1076
Alignment:
Q  214 atggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaattt 313  Q
    |||| ||||||||| |||| |||||||| || |  |||||||| |||||| |||||| ||||||||||||||   | || |||||||| ||||| ||||     
T  1243 atggtaactacacaaccaacagcacctaccacacaaacctcaaaacccttctatccactctcacttccaacaaagatattaactacggtttctataattc 1144  T
Q  314 ctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatg 381  Q
    ||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||| ||||    
T  1143 ctcttatggcgtaaacaccgacaaagtaaacgctattggactgtgtagaggagatgtcaaacccgatg 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 381
Target Start/End: Complemental strand, 8897 - 8730
Alignment:
Q  214 atggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaattt 313  Q
    |||| ||||||||| |||| |||||||| || |  |||||||| |||||| |||||| ||||||||||||||   | || |||||||| ||||| ||||     
T  8897 atggtaactacacaaccaacagcacctaccacacaaacctcaaaacccttctatccactctcacttccaacaaagatattaactacggtttctataattc 8798  T
Q  314 ctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatg 381  Q
    ||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||| ||||    
T  8797 ctcttatggcgtaaacaccgacaaagtaaacgctattggactgtgtagaggagatgtcaaacccgatg 8730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 414
Target Start/End: Complemental strand, 28862032 - 28861829
Alignment:
Q  211 ataatggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaa 310  Q
    |||||||||||||||||   || ||||| |||||| | ||||||||||| |||||||| | ||| |||||||||||  |||||| |||||| ||||||||    
T  28862032 ataatggcaactacacaaaaaacagcacatatcaacaaaacctcaacacacttttatcaactctaacttccaacacagaaatcacctacggtttctacaa 28861933  T
Q  311 tttctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaaga 410  Q
     ||||| |  ||| || ||| | |||||||| ||||||| ||| | ||||||||||||||||| ||  ||| |||||||||| |||| ||  ||||||||    
T  28861932 cttctcattcggcgaagacaacaacaaagtatacgccataggattatgcagaggagatgttaatccaaatgattgccgcagttgtcttaacaattcaaga 28861833  T
Q  411 gttc 414  Q
    ||||    
T  28861832 gttc 28861829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 414
Target Start/End: Complemental strand, 28856755 - 28856552
Alignment:
Q  211 ataatggcaactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaa 310  Q
    ||||| |||||||||||   || ||||| |||||| | ||||||||||| |||||||| | ||| |||||||||||  |||||| |||||| ||||||||    
T  28856755 ataatagcaactacacaaaaaacagcacatatcaacaaaacctcaacacacttttatcaactctaacttccaacacagaaatcacctacggtttctacaa 28856656  T
Q  311 tttctcttatggccaaaacaccgacaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaaga 410  Q
     ||||| |  ||| || ||| | |||||||| ||||||| ||| | ||||||||||||||||| ||  ||| |||||||||| |||| ||  ||||||||    
T  28856655 cttctcattcggcgaagacaacaacaaagtatacgccataggattatgcagaggagatgttaatccaaatgattgccgcagttgtcttaacaattcaaga 28856556  T
Q  411 gttc 414  Q
    ||||    
T  28856555 gttc 28856552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 414
Target Start/End: Complemental strand, 28831536 - 28831356
Alignment:
Q  234 agcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctcttatggccaaaacaccg 333  Q
    ||||| |||||| | ||||||||||| |||||||| | ||| |||||||||||  |||||| |||||| |||||||| ||||| || ||| ||  || |     
T  28831536 agcacatatcaacaaaacctcaacacacttttatcaactctaacttccaacacagaaatcacctacggtttctacaacttctcatacggcaaaggcaaca 28831437  T
Q  334 acaaagtaaacgccattggactctgcagaggagatgttaaacctgatgtttgccgcagtcgtctcaatgattcaagagttc 414  Q
    |||||||| ||||||| ||| | || |||||||||||||| ||  ||| ||||||| ||  ||| ||  ||||||||||||    
T  28831436 acaaagtatacgccataggattatgtagaggagatgttaatccaaatgattgccgccgttatcttaacaattcaagagttc 28831356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 352
Target Start/End: Complemental strand, 27371881 - 27371748
Alignment:
Q  219 aactacacagccaatagcacctatcaaaacaacctcaacacccttttatccaatctcacttccaacactcaaatcaactacgggttctacaatttctctt 318  Q
    |||||||||| ||||||||||||  | |||||||| || |||||| ||| || | || ||||| ||||  |||| |||||||| || ||||||||||| |    
T  27371881 aactacacagtcaatagcacctacgacaacaaccttaaaacccttctatacagtttctcttcccacacagaaattaactacggtttttacaatttctcat 27371782  T
Q  319 atggccaaaacaccgacaaagtaaacgccattgg 352  Q
    |||||||| || | |||||| |||| ||||||||    
T  27371781 atggccaacacccagacaaaataaaggccattgg 27371748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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