View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2898_high_22 (Length: 354)

Name: NF2898_high_22
Description: NF2898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2898_high_22
NF2898_high_22
[»] scaffold0219 (3 HSPs)
scaffold0219 (190-240)||(9769-9820)
scaffold0219 (280-339)||(9952-10011)
scaffold0219 (242-279)||(9848-9885)
[»] chr2 (30 HSPs)
chr2 (1-42)||(23630670-23630711)
chr2 (1-44)||(15716056-15716099)
chr2 (1-41)||(24042654-24042694)
chr2 (1-41)||(27387033-27387073)
chr2 (1-41)||(39525966-39526006)
chr2 (1-40)||(26623020-26623059)
chr2 (1-40)||(27441746-27441785)
chr2 (1-39)||(4730103-4730141)
chr2 (1-39)||(8704969-8705007)
chr2 (1-39)||(12648435-12648473)
chr2 (1-39)||(12663430-12663468)
chr2 (1-39)||(19448839-19448877)
chr2 (1-39)||(19463649-19463687)
chr2 (1-39)||(19562329-19562367)
chr2 (1-39)||(20845859-20845897)
chr2 (1-39)||(21695610-21695648)
chr2 (1-39)||(21710340-21710378)
chr2 (1-39)||(23118792-23118830)
chr2 (1-39)||(27426704-27426742)
chr2 (1-39)||(28890249-28890287)
chr2 (1-39)||(32679174-32679212)
chr2 (8-41)||(29533331-29533364)
chr2 (8-41)||(30207908-30207941)
chr2 (8-40)||(10118040-10118072)
chr2 (1-41)||(13062495-13062535)
chr2 (3-39)||(17629906-17629942)
chr2 (1-37)||(18083247-18083283)
chr2 (1-41)||(28875037-28875077)
chr2 (8-40)||(32239233-32239265)
chr2 (1-41)||(37873014-37873054)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-44)||(12550-12593)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-39)||(19613-19651)
scaffold0145 (1-39)||(26720-26758)
[»] chr8 (23 HSPs)
chr8 (1-39)||(28260400-28260438)
chr8 (1-41)||(553010-553050)
chr8 (1-41)||(2144614-2144654)
chr8 (1-41)||(3219064-3219104)
chr8 (1-41)||(14362194-14362234)
chr8 (1-41)||(40697682-40697722)
chr8 (1-44)||(12482690-12482733)
chr8 (1-40)||(15207825-15207864)
chr8 (1-40)||(21379845-21379884)
chr8 (1-40)||(27616202-27616241)
chr8 (1-40)||(29034244-29034283)
chr8 (1-40)||(33239719-33239758)
chr8 (1-39)||(2129444-2129482)
chr8 (1-39)||(15321716-15321754)
chr8 (1-39)||(15502085-15502123)
chr8 (1-39)||(18789310-18789348)
chr8 (1-39)||(19664524-19664562)
chr8 (1-39)||(19696032-19696070)
chr8 (1-39)||(21339874-21339912)
chr8 (1-39)||(21963016-21963054)
chr8 (1-39)||(30369732-30369770)
chr8 (8-41)||(15015604-15015637)
chr8 (1-42)||(16257111-16257152)
[»] chr6 (38 HSPs)
chr6 (1-39)||(16559414-16559452)
chr6 (1-39)||(30723438-30723476)
chr6 (1-42)||(26500330-26500371)
chr6 (8-44)||(18692979-18693015)
chr6 (1-41)||(27309622-27309662)
chr6 (1-40)||(13306134-13306173)
chr6 (1-40)||(14852101-14852140)
chr6 (1-40)||(15432078-15432117)
chr6 (1-40)||(24373977-24374016)
chr6 (1-40)||(30404714-30404753)
chr6 (1-40)||(32783772-32783811)
chr6 (1-39)||(1140222-1140260)
chr6 (1-39)||(3041080-3041118)
chr6 (1-39)||(7582660-7582698)
chr6 (1-39)||(13291167-13291205)
chr6 (1-39)||(15404700-15404738)
chr6 (1-39)||(15416487-15416525)
chr6 (1-39)||(16001588-16001626)
chr6 (1-39)||(21996632-21996670)
chr6 (1-39)||(22157312-22157350)
chr6 (8-42)||(22482858-22482892)
chr6 (1-39)||(22926482-22926520)
chr6 (1-39)||(24297926-24297964)
chr6 (1-39)||(24311967-24312005)
chr6 (1-39)||(26981962-26982000)
chr6 (1-39)||(26992855-26992893)
chr6 (1-39)||(27027198-27027236)
chr6 (1-39)||(27210898-27210936)
chr6 (1-39)||(27238292-27238330)
chr6 (1-39)||(27643837-27643875)
chr6 (1-39)||(28157814-28157852)
chr6 (8-41)||(16769907-16769940)
chr6 (8-41)||(18820693-18820726)
chr6 (8-40)||(921797-921829)
chr6 (8-40)||(6873723-6873755)
chr6 (8-40)||(8762900-8762932)
chr6 (8-40)||(22253371-22253403)
chr6 (8-40)||(26911465-26911497)
[»] chr3 (50 HSPs)
chr3 (1-39)||(1988268-1988306)
chr3 (1-39)||(4881591-4881629)
chr3 (1-43)||(18323481-18323523)
chr3 (1-42)||(4803784-4803825)
chr3 (1-42)||(14053744-14053785)
chr3 (1-42)||(18523296-18523337)
chr3 (1-41)||(11788258-11788298)
chr3 (1-41)||(14454400-14454440)
chr3 (1-41)||(19630356-19630396)
chr3 (1-41)||(36133881-36133921)
chr3 (1-40)||(1735611-1735650)
chr3 (1-40)||(8310591-8310630)
chr3 (1-40)||(11263559-11263598)
chr3 (1-40)||(12959980-12960019)
chr3 (1-40)||(15660088-15660127)
chr3 (1-40)||(16066290-16066329)
chr3 (1-40)||(18000454-18000493)
chr3 (1-40)||(32966706-32966745)
chr3 (1-39)||(3389349-3389387)
chr3 (1-39)||(4681773-4681811)
chr3 (1-39)||(4691879-4691917)
chr3 (1-39)||(4788949-4788987)
chr3 (1-39)||(4886340-4886378)
chr3 (1-39)||(6185149-6185187)
chr3 (1-39)||(6209914-6209952)
chr3 (1-39)||(8281781-8281819)
chr3 (1-39)||(8288787-8288825)
chr3 (8-42)||(10932479-10932513)
chr3 (1-39)||(14144290-14144328)
chr3 (1-39)||(15369028-15369066)
chr3 (1-39)||(15733374-15733412)
chr3 (1-39)||(16617055-16617093)
chr3 (1-39)||(16967341-16967379)
chr3 (1-39)||(18338582-18338620)
chr3 (1-39)||(18914703-18914741)
chr3 (1-39)||(19273395-19273433)
chr3 (1-39)||(19446805-19446843)
chr3 (1-39)||(19702203-19702241)
chr3 (1-39)||(22042064-22042102)
chr3 (1-39)||(22379722-22379760)
chr3 (1-39)||(22394655-22394693)
chr3 (1-39)||(27933123-27933161)
chr3 (1-39)||(28357249-28357287)
chr3 (1-39)||(35873636-35873674)
chr3 (8-41)||(28168540-28168573)
chr3 (8-40)||(1774476-1774508)
chr3 (1-41)||(5202447-5202487)
chr3 (9-41)||(15366841-15366873)
chr3 (8-40)||(17902216-17902248)
chr3 (1-41)||(19925765-19925805)
[»] chr7 (40 HSPs)
chr7 (1-42)||(4183764-4183805)
chr7 (1-42)||(18134899-18134940)
chr7 (1-41)||(11432006-11432046)
chr7 (1-41)||(14932617-14932657)
chr7 (1-41)||(15356052-15356092)
chr7 (1-41)||(15360166-15360206)
chr7 (1-41)||(18427509-18427549)
chr7 (1-41)||(23237692-23237732)
chr7 (1-41)||(30305778-30305818)
chr7 (1-40)||(2113739-2113778)
chr7 (1-40)||(2966925-2966964)
chr7 (1-40)||(4546381-4546420)
chr7 (1-40)||(5804608-5804647)
chr7 (1-40)||(13897763-13897802)
chr7 (1-40)||(20590097-20590136)
chr7 (1-40)||(22835105-22835144)
chr7 (1-39)||(5121114-5121152)
chr7 (1-39)||(5156065-5156103)
chr7 (1-39)||(5166365-5166403)
chr7 (1-39)||(5243611-5243649)
chr7 (1-39)||(10849343-10849381)
chr7 (1-39)||(10908788-10908826)
chr7 (1-39)||(10924323-10924361)
chr7 (1-39)||(11417003-11417041)
chr7 (1-39)||(14228025-14228063)
chr7 (1-39)||(15921296-15921334)
chr7 (1-39)||(17099184-17099222)
chr7 (1-39)||(22975718-22975756)
chr7 (1-39)||(26504237-26504275)
chr7 (1-39)||(26506778-26506816)
chr7 (1-39)||(26588439-26588477)
chr7 (1-39)||(39204046-39204084)
chr7 (1-39)||(39215417-39215455)
chr7 (8-41)||(12076444-12076477)
chr7 (8-41)||(23762438-23762471)
chr7 (1-37)||(15851458-15851494)
chr7 (8-44)||(26690994-26691030)
chr7 (8-40)||(30244128-30244160)
chr7 (1-41)||(35969390-35969430)
chr7 (1-41)||(35990802-35990842)
[»] chr1 (16 HSPs)
chr1 (1-42)||(21083588-21083629)
chr1 (1-41)||(15431688-15431728)
chr1 (1-41)||(21729689-21729729)
chr1 (1-41)||(26795547-26795587)
chr1 (8-47)||(8885421-8885460)
chr1 (1-40)||(14948575-14948614)
chr1 (1-40)||(15818896-15818935)
chr1 (1-39)||(16200402-16200440)
chr1 (1-39)||(18286561-18286599)
chr1 (1-39)||(21889595-21889633)
chr1 (1-39)||(33696114-33696152)
chr1 (1-39)||(37887299-37887337)
chr1 (1-39)||(46197499-46197537)
chr1 (8-40)||(9188606-9188638)
chr1 (8-40)||(20324084-20324116)
chr1 (8-40)||(46458244-46458276)
[»] scaffold0954 (1 HSPs)
scaffold0954 (1-41)||(359-399)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-41)||(1927-1967)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-41)||(21182-21222)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-41)||(115559-115599)
[»] chr5 (38 HSPs)
chr5 (1-41)||(30927489-30927529)
chr5 (1-40)||(18081289-18081328)
chr5 (1-39)||(573421-573459)
chr5 (1-39)||(7813523-7813561)
chr5 (1-39)||(11543234-11543272)
chr5 (1-39)||(11557293-11557331)
chr5 (1-39)||(18064270-18064308)
chr5 (1-39)||(20196275-20196313)
chr5 (1-39)||(20582624-20582662)
chr5 (1-39)||(21504758-21504796)
chr5 (1-39)||(22275171-22275209)
chr5 (1-39)||(22344998-22345036)
chr5 (1-39)||(22991299-22991337)
chr5 (1-39)||(23006296-23006334)
chr5 (1-39)||(23728246-23728284)
chr5 (1-39)||(23734982-23735020)
chr5 (1-39)||(24614753-24614791)
chr5 (1-39)||(24711151-24711189)
chr5 (1-39)||(24744147-24744185)
chr5 (1-39)||(24756915-24756953)
chr5 (1-39)||(24944923-24944961)
chr5 (1-39)||(25192809-25192847)
chr5 (1-39)||(25208197-25208235)
chr5 (1-39)||(25272353-25272391)
chr5 (1-39)||(30954365-30954403)
chr5 (1-39)||(33770360-33770398)
chr5 (1-39)||(33785311-33785349)
chr5 (1-39)||(34496160-34496198)
chr5 (1-39)||(35874078-35874116)
chr5 (1-39)||(37297330-37297368)
chr5 (8-41)||(19866321-19866354)
chr5 (8-41)||(30467726-30467759)
chr5 (8-41)||(30915579-30915612)
chr5 (8-40)||(3941316-3941348)
chr5 (8-40)||(16679985-16680017)
chr5 (1-41)||(23885072-23885112)
chr5 (8-44)||(37678890-37678926)
chr5 (8-40)||(41299013-41299045)
[»] chr4 (39 HSPs)
chr4 (1-41)||(4862979-4863019)
chr4 (1-41)||(19642266-19642306)
chr4 (1-41)||(30275792-30275832)
chr4 (1-41)||(40560504-40560544)
chr4 (1-40)||(1668353-1668392)
chr4 (1-40)||(10819577-10819616)
chr4 (1-40)||(17007025-17007064)
chr4 (1-40)||(24599398-24599437)
chr4 (1-40)||(34845898-34845937)
chr4 (1-39)||(1640531-1640569)
chr4 (1-39)||(1893279-1893317)
chr4 (1-39)||(1908078-1908116)
chr4 (1-39)||(5202632-5202670)
chr4 (1-39)||(5314737-5314775)
chr4 (1-39)||(6559785-6559823)
chr4 (1-39)||(9250472-9250510)
chr4 (1-39)||(10273653-10273691)
chr4 (1-39)||(13438508-13438546)
chr4 (1-39)||(15198404-15198442)
chr4 (1-39)||(15370970-15371008)
chr4 (1-39)||(15402471-15402509)
chr4 (1-39)||(16276070-16276108)
chr4 (1-39)||(16396716-16396754)
chr4 (1-39)||(17020989-17021027)
chr4 (1-39)||(20306242-20306280)
chr4 (1-39)||(20754803-20754841)
chr4 (1-39)||(24584571-24584609)
chr4 (1-39)||(26409643-26409681)
chr4 (1-39)||(26463873-26463911)
chr4 (1-39)||(49286164-49286202)
chr4 (8-41)||(12783081-12783114)
chr4 (8-41)||(15216982-15217015)
chr4 (2-39)||(15378622-15378659)
chr4 (2-39)||(15398557-15398594)
chr4 (8-41)||(17084357-17084390)
chr4 (8-40)||(15384923-15384955)
chr4 (1-41)||(18030378-18030418)
chr4 (8-40)||(22729686-22729718)
chr4 (8-40)||(34196531-34196563)
[»] scaffold0557 (1 HSPs)
scaffold0557 (1-40)||(10711-10750)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-40)||(21285-21324)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-40)||(683-722)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-43)||(44692-44727)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-40)||(147948-147987)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-40)||(154408-154447)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-40)||(169611-169650)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-40)||(75488-75527)
scaffold0001 (8-42)||(384565-384599)
scaffold0001 (8-42)||(384741-384775)
[»] scaffold0759 (1 HSPs)
scaffold0759 (1-39)||(6406-6444)
[»] scaffold0750 (1 HSPs)
scaffold0750 (1-39)||(3239-3277)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-39)||(5421-5459)
[»] scaffold0322 (1 HSPs)
scaffold0322 (1-39)||(14020-14058)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-39)||(23226-23264)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-39)||(26946-26984)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-39)||(29069-29107)
[»] scaffold0089 (2 HSPs)
scaffold0089 (1-39)||(22691-22729)
scaffold0089 (1-39)||(54330-54368)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-39)||(56093-56131)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-39)||(56821-56859)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-39)||(27165-27203)
[»] scaffold0181 (1 HSPs)
scaffold0181 (8-41)||(21287-21320)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-41)||(18239-18272)
[»] scaffold2096 (1 HSPs)
scaffold2096 (8-40)||(1055-1087)
[»] scaffold0978 (1 HSPs)
scaffold0978 (8-40)||(268-300)
[»] scaffold0761 (1 HSPs)
scaffold0761 (8-48)||(6477-6517)
[»] scaffold0589 (1 HSPs)
scaffold0589 (8-40)||(174-206)
[»] scaffold0524 (1 HSPs)
scaffold0524 (8-40)||(11692-11724)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-41)||(5870-5910)
[»] scaffold0093 (2 HSPs)
scaffold0093 (8-40)||(3434-3466)
scaffold0093 (8-40)||(8057-8089)
[»] scaffold0086 (1 HSPs)
scaffold0086 (8-40)||(54785-54817)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-41)||(156610-156650)
scaffold0022 (1-41)||(170300-170340)
[»] scaffold0014 (1 HSPs)
scaffold0014 (8-40)||(207486-207518)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-41)||(224628-224668)


Alignment Details
Target: scaffold0219 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 9769 - 9820
Alignment:
Q  190 agttggaactcaaaaggaagacgctaccaatgaatta-aaaaagagtaataa 240  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  9769 agttggaactcaaaaggaagaggctaccaatgaattagaaaaagagtaataa 9820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 9952 - 10011
Alignment:
Q  280 aatagcaccaaccatgcctaacacaattataagtggagatctgtaagttagagagagaga 339  Q
    |||||||||||||||| ||||||  |||| |||| || ||||||||||||||||||||||    
T  9952 aatagcaccaaccatgtctaacaatattaaaagtagaaatctgtaagttagagagagaga 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 9848 - 9885
Alignment:
Q  242 aagattgatatgaggataattgtcattgatattagaat 279  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  9848 aagattgatatgaggatatttgtcattgatgttagaat 9885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23630711 - 23630670
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  23630711 ttgaacaagtatttttaggtccaaaatcagggtataacaatg 23630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15716056 - 15716099
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  15716056 ttgaacgagtatttttaggtccaaaatcagggtataacaatgat 15716099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24042694 - 24042654
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  24042694 ttgaacgagtatttttaggtccaaaatcagggtataacaat 24042654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27387073 - 27387033
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  27387073 ttgaacgagtatttttaggtccaaaatcagggtataacaat 27387033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39525966 - 39526006
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  39525966 ttgaacgagtatttttaggtccaaaatcagggtataacaat 39526006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26623020 - 26623059
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  26623020 ttgaacgagtatttttaggtccaaaatcagggtataacaa 26623059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27441746 - 27441785
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  27441746 ttgaacgagtatttttaggtccaaaatcagggtataacaa 27441785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4730103 - 4730141
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4730103 ttgaacgagtatttttaggtccaaaatcagggtataaca 4730141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8704969 - 8705007
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  8704969 ttgaacgagtatttttaggtccaaaatcagggtataaca 8705007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12648473 - 12648435
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  12648473 ttgaacgagtatttttaggtccaaaatcagggtataaca 12648435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12663468 - 12663430
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  12663468 ttgaacgagtatttttaggtccaaaatcagggtataaca 12663430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19448839 - 19448877
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19448839 ttgaacgagtatttttaggtccaaaatcagggtataaca 19448877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19463649 - 19463687
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19463649 ttgaacgagtatttttaggtccaaaatcagggtataaca 19463687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19562329 - 19562367
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19562329 ttgaacgagtatttttaggtccaaaatcagggtataaca 19562367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20845897 - 20845859
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  20845897 ttgaacgagtatttttaggtccaaaatcagggtataaca 20845859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21695610 - 21695648
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21695610 ttgaacgagtatttttaggtccaaaatcagggtataaca 21695648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21710340 - 21710378
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21710340 ttgaacgagtatttttaggtccaaaatcagggtataaca 21710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23118830 - 23118792
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  23118830 ttgaacgagtatttttaggtccaaaatcagggtataaca 23118792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27426704 - 27426742
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27426704 ttgaacgagtatttttaggtccaaaatcagggtataaca 27426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28890287 - 28890249
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  28890287 ttgaacgagtatttttaggtccaaaatcagggtataaca 28890249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32679212 - 32679174
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  32679212 ttgaacgagtatttttaggtccaaaatcagggtataaca 32679174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 29533331 - 29533364
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  29533331 agtatttttaggtccaaaatcagggtataacaat 29533364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30207908 - 30207941
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  30207908 agtatttttaggtccaaaatcagggtataacaat 30207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 10118040 - 10118072
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  10118040 agtatttttaggtccaaaatcagggtataacaa 10118072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13062535 - 13062495
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  13062535 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 13062495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 17629942 - 17629906
Alignment:
Q  3 gaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||| |||||| |||||||||||||||||||||||||    
T  17629942 gaacgagtatttttaggtccaaaatcagggtataaca 17629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18083283 - 18083247
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataa 37  Q
    |||||| |||||| |||||||||||||||||||||||    
T  18083283 ttgaacgagtatttttaggtccaaaatcagggtataa 18083247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28875077 - 28875037
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  28875077 ttgaacgagtatttttaggtccaaaatcagagtataacaat 28875037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 32239233 - 32239265
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  32239233 agtatttttaggtccaaaatcagggtataacaa 32239265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37873014 - 37873054
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  37873014 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 37873054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12550 - 12593
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  12550 ttgaacgagtatttttaggtccaaaatcagggtataacaatgat 12593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19651 - 19613
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19651 ttgaacaagtatttttaggtccaaaatcagggtataaca 19613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26720 - 26758
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26720 ttgaacgagtatttttaggtccaaaatcagggtataaca 26758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28260438 - 28260400
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  28260438 ttgaacaagtatttttaggtccaaaatcagggtataaca 28260400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 553050 - 553010
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  553050 ttgaacgagtatttttaggtccaaaatcagggtataacaat 553010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2144614 - 2144654
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  2144614 ttgaacgagtatttttaggtccaaaatcagggtataacaat 2144654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3219104 - 3219064
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  3219104 ttgaacgagtatttttaggtccaaaatcagggtataacaat 3219064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14362194 - 14362234
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  14362194 ttgaacaagtatttttaggtccaaaatcagggtacaacaat 14362234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40697722 - 40697682
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  40697722 ttgaacgagtatttttaggtccaaaatcagggtataacaat 40697682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12482690 - 12482733
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||    
T  12482690 ttgaacgagtatttttaggtccaaaatcagggtataacagtgat 12482733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15207864 - 15207825
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  15207864 ttgaacgagtattcttaggtccaaaatcagggtataacaa 15207825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21379845 - 21379884
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  21379845 ttgaacgagtatttttaggtccaaaatcagggtataacaa 21379884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27616202 - 27616241
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  27616202 ttgaacgagtatttttaggtccaaaatcagggtataacaa 27616241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29034283 - 29034244
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  29034283 ttgaacgagtatttttaggtccaaaatcagggtataacaa 29034244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33239758 - 33239719
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  33239758 ttgaacgagtatttttaggtccaaaatcagggtataacaa 33239719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2129444 - 2129482
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  2129444 ttgaacgagtatttttaggtccaaaatcagggtataaca 2129482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15321754 - 15321716
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15321754 ttgaacgagtatttttaggtccaaaatcagggtataaca 15321716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15502123 - 15502085
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15502123 ttgaacgagtatttttaggtccaaaatcagggtataaca 15502085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18789310 - 18789348
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  18789310 ttgaacgagtatttttaggtccaaaatcagggtataaca 18789348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19664562 - 19664524
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19664562 ttgaacgagtatttttaggtccaaaatcagggtataaca 19664524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19696070 - 19696032
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19696070 ttgaacgagtatttttaggtccaaaatcagggtataaca 19696032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21339874 - 21339912
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21339874 ttgaacgagtatttttaggtccaaaatcagggtataaca 21339912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21963054 - 21963016
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21963054 ttgaacgagtatttttaggtccaaaatcagggtataaca 21963016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30369732 - 30369770
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  30369732 ttgaacgagtatttttaggtccaaaatcagggtataaca 30369770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 15015637 - 15015604
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  15015637 agtatttttaggtccaaaatcagggtataacaat 15015604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16257111 - 16257152
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||| | ||||||||||||||||||||||||||||    
T  16257111 ttgaacgagtaattttaggtccaaaatcagggtataacaatg 16257152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16559452 - 16559414
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16559452 ttgaacaagtatttttaggtccaaaatcagggtataaca 16559414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30723438 - 30723476
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  30723438 ttgaacaagtatttttaggtccaaaatcagggtataaca 30723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26500371 - 26500330
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  26500371 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 26500330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 18693015 - 18692979
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18693015 agtatttttaggtccaaaatcagggtataacaatgat 18692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27309622 - 27309662
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  27309622 ttgaacgagtatttttaggtccaaaatcagggtataacaat 27309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13306134 - 13306173
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  13306134 ttgaacgagtatttttaggtccaaaatcagggtataacaa 13306173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14852140 - 14852101
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  14852140 ttgaacgagtatttttaggtccaaaatcagggtataacaa 14852101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15432078 - 15432117
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  15432078 ttgaacgagtatttttaggtccaaaatcagggtataacaa 15432117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24374016 - 24373977
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  24374016 ttgaacgagtatttttaggtccaaaatcagggtataacaa 24373977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30404714 - 30404753
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  30404714 ttgaacgagtatttttaggtccaaaatcagggtataacaa 30404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32783772 - 32783811
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  32783772 ttgaacgagtatttttaggtccaaaatcagggtataacaa 32783811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1140260 - 1140222
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  1140260 ttgaacgagtatttttaggtccaaaatcagggtataaca 1140222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3041118 - 3041080
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  3041118 ttgaacaagtatttttaggtccaaaatcagggtacaaca 3041080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7582698 - 7582660
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  7582698 ttgaacgagtatttttaggtccaaaatcagggtataaca 7582660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13291167 - 13291205
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  13291167 ttgaacgagtatttttaggtccaaaatcagggtataaca 13291205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15404700 - 15404738
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15404700 ttgaacgagtatttttaggtccaaaatcagggtataaca 15404738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15416487 - 15416525
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15416487 ttgaacgagtatttttaggtccaaaatcagggtataaca 15416525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16001626 - 16001588
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16001626 ttgaacgagtatttttaggtccaaaatcagggtataaca 16001588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21996632 - 21996670
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21996632 ttgaacgagtatttttaggtccaaaatcagggtataaca 21996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22157312 - 22157350
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22157312 ttgaacgagtatttttaggtccaaaatcagggtataaca 22157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 22482858 - 22482892
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  22482858 agtatttttaggtccaaaatcagggtataacaatg 22482892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22926482 - 22926520
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22926482 ttgaacgagtatttttaggtccaaaatcagggtataaca 22926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24297926 - 24297964
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24297926 ttgaacgagtatttttaggtccaaaatcagggtataaca 24297964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24311967 - 24312005
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24311967 ttgaacgagtatttttaggtccaaaatcagggtataaca 24312005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26982000 - 26981962
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26982000 ttgaacgagtatttttaggtccaaaatcagggtataaca 26981962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26992893 - 26992855
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26992893 ttgaacgagtatttttaggtccaaaatcagggtataaca 26992855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27027236 - 27027198
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27027236 ttgaacgagtatttttaggtccaaaatcagggtataaca 27027198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27210936 - 27210898
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27210936 ttgaacgagtatttttaggtccaaaatcagggtataaca 27210898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27238292 - 27238330
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27238292 ttgaacgagtatttttaggtccaaaatcagggtataaca 27238330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27643875 - 27643837
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  27643875 ttgaacaagtatttttaggtccaaaatcagggtacaaca 27643837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28157852 - 28157814
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  28157852 ttgaacgagtatttttaggtccaaaatcagggtataaca 28157814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 16769907 - 16769940
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  16769907 agtatttttaggtccaaaatcagggtataacaat 16769940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 18820693 - 18820726
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  18820693 agtatttttaggtccaaaatcagggtataacaat 18820726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 921829 - 921797
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  921829 agtatttttaggtccaaaatcagggtataacaa 921797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 6873755 - 6873723
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  6873755 agtatttttaggtccaaaatcagggtataacaa 6873723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 8762932 - 8762900
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  8762932 agtatttttaggtccaaaatcagggtataacaa 8762900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 22253403 - 22253371
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  22253403 agtatttttaggtccaaaatcagggtataacaa 22253371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 26911497 - 26911465
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  26911497 agtatttttaggtccaaaatcagggtataacaa 26911465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1988268 - 1988306
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  1988268 ttgaacaagtatttttaggtccaaaatcagggtataaca 1988306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4881629 - 4881591
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4881629 ttgaacaagtatttttaggtccaaaatcagggtataaca 4881591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18323523 - 18323481
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatga 43  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  18323523 ttgaacgagtatttttaggtccaaaatcagggtataacaatga 18323481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4803784 - 4803825
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  4803784 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 4803825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14053744 - 14053785
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  14053744 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 14053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18523337 - 18523296
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  18523337 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 18523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11788298 - 11788258
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  11788298 ttgaacgagtatttttaggtccaaaatcagggtataacaat 11788258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14454400 - 14454440
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  14454400 ttgaacaagtatttttaggtccaaaatcagggtacaacaat 14454440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19630356 - 19630396
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  19630356 ttgaacgagtatttttaggtccaaaatcagggtataacaat 19630396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36133881 - 36133921
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  36133881 ttgaacgagtatttttaggtccaaaatcagggtataacaat 36133921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1735611 - 1735650
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  1735611 ttgaacgagtatttttaggtccaaaatcagggtataacaa 1735650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8310591 - 8310630
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  8310591 ttgaacgagtatttttaggtccaaaatcagggtataacaa 8310630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11263559 - 11263598
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  11263559 ttgaacgagtatttttaggtccaaaatcagggtataacaa 11263598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12959980 - 12960019
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  12959980 ttgaacgagtatttttaggtccaaaatcagggtataacaa 12960019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15660088 - 15660127
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  15660088 ttgaacaagtatttttaggtccaaaatcagggtacaacaa 15660127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16066290 - 16066329
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  16066290 ttgaacgagtatttttaggtccaaaatcagggtataacaa 16066329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18000493 - 18000454
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  18000493 ttgaacgagtatttttaggtccaaaatcagggtataacaa 18000454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32966706 - 32966745
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  32966706 ttgaacgagtatttttaggtccaaaatcagggtataacaa 32966745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3389387 - 3389349
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  3389387 ttgaacgagtatttttaggtccaaaatcagggtataaca 3389349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4681811 - 4681773
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4681811 ttgaacgagtatttttaggtccaaaatcagggtataaca 4681773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4691917 - 4691879
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4691917 ttgaacgagtatttttaggtccaaaatcagggtataaca 4691879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4788949 - 4788987
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4788949 ttgaacgagtatttttaggtccaaaatcagggtataaca 4788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4886378 - 4886340
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  4886378 ttgaacgagtatttttaggtccaaaatcagggtataaca 4886340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6185187 - 6185149
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  6185187 ttgaacgagtatttttaggtccaaaatcagggtataaca 6185149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6209952 - 6209914
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  6209952 ttgaacgagtatttttaggtccaaaatcagggtataaca 6209914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8281781 - 8281819
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  8281781 ttgaacgagtatttttaggtccaaaatcagggtataaca 8281819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8288825 - 8288787
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  8288825 ttgaacgagtatttttaggtccaaaatcagggtataaca 8288787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 10932479 - 10932513
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  10932479 agtatttttaggtccaaaatcagggtataacaatg 10932513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14144290 - 14144328
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  14144290 ttgaacgagtatttttaggtccaaaatcagggtataaca 14144328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15369066 - 15369028
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15369066 ttgaacgagtatttttaggtccaaaatcagggtataaca 15369028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15733374 - 15733412
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15733374 ttgaacgagtatttttaggtccaaaatcagggtataaca 15733412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16617055 - 16617093
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16617055 ttgaacgagtatttttaggtccaaaatcagggtataaca 16617093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16967341 - 16967379
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16967341 ttgaacgagtatttttaggtccaaaatcagggtataaca 16967379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18338620 - 18338582
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  18338620 ttgaacgagtatttttaggtccaaaatcagggtataaca 18338582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18914741 - 18914703
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  18914741 ttgaacgagtatttttaggtccaaaatcagggtataaca 18914703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19273433 - 19273395
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19273433 ttgaacgagtatttttaggtccaaaatcagggtataaca 19273395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19446843 - 19446805
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19446843 ttgaacgagtatttttaggtccaaaatcagggtataaca 19446805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19702241 - 19702203
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  19702241 ttgaacgagtatttttaggtccaaaatcagggtataaca 19702203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22042102 - 22042064
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22042102 ttgaacgagtatttttaggtccaaaatcagggtataaca 22042064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22379722 - 22379760
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22379722 ttgaacgagtatttttaggtccaaaatcagggtataaca 22379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22394655 - 22394693
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22394655 ttgaacgagtatttttaggtccaaaatcagggtataaca 22394693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27933123 - 27933161
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27933123 ttgaacgagtatttttaggtccaaaatcagggtataaca 27933161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28357287 - 28357249
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  28357287 ttgaacgagtatttttaggtccaaaatcagggtataaca 28357249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35873674 - 35873636
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  35873674 ttgaacgagtatttttaggtccaaaatcagggtataaca 35873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 28168540 - 28168573
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  28168540 agtatttttaggtccaaaatcagggtataacaat 28168573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 1774508 - 1774476
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  1774508 agtatttttaggtccaaaatcagggtataacaa 1774476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5202487 - 5202447
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| ||| |||||||||||||||||||||||    
T  5202487 ttgaacgagtatttttaagtccaaaatcagggtataacaat 5202447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 15366841 - 15366873
Alignment:
Q  9 gtattgttaggtccaaaatcagggtataacaat 41  Q
    ||||| |||||||||||||||||||||||||||    
T  15366841 gtatttttaggtccaaaatcagggtataacaat 15366873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 17902248 - 17902216
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  17902248 agtatttttaggtccaaaatcagggtataacaa 17902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19925805 - 19925765
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  19925805 ttgaacgagtattttcaggtccaaaatcagggtataacaat 19925765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4183805 - 4183764
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  4183805 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 4183764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18134940 - 18134899
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  18134940 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 18134899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11432006 - 11432046
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  11432006 ttgaacgagtatttttaggtccaaaatcagggtataacaat 11432046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14932617 - 14932657
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  14932617 ttgaacgagtatttttaggtccaaaatcagggtataacaat 14932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15356052 - 15356092
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  15356052 ttgaacgagtatttttaggtccaaaatcagggtataacaat 15356092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15360166 - 15360206
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  15360166 ttgaacgagtatttttaggtccaaaatcagggtataacaat 15360206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18427549 - 18427509
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  18427549 ttgaacgagtatttttaggtccaaaatcagggtataacaat 18427509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23237732 - 23237692
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  23237732 ttgaacgagtatttttaggtccaaaatcagggtataacaat 23237692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30305818 - 30305778
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  30305818 ttgaacgagtatttttaggtccaaaatcagggtataacaat 30305778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2113739 - 2113778
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  2113739 ttgaacgagtatttttaggtccaaaatcagggtataacaa 2113778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2966964 - 2966925
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  2966964 ttgaacgagtatttttaggtccaaaatcagggtataacaa 2966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4546381 - 4546420
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  4546381 ttgaacgagtatttttaggtccaaaatcagggtataacaa 4546420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5804608 - 5804647
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  5804608 ttgaacgagtatttttaggtccaaaatcagggtataacaa 5804647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13897763 - 13897802
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  13897763 ttgaacgagtatttttaggtccaaaatcagggtataacaa 13897802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20590136 - 20590097
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  20590136 ttgaacgagtatttttaggtccaaaatcagggtataacaa 20590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22835105 - 22835144
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  22835105 ttgaacgagtatttttaggtccaaaatcagggtataacaa 22835144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5121152 - 5121114
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5121152 ttgaacgagtatttttaggtccaaaatcagggtataaca 5121114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5156103 - 5156065
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5156103 ttgaacgagtatttttaggtccaaaatcagggtataaca 5156065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5166403 - 5166365
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5166403 ttgaacgagtatttttaggtccaaaatcagggtataaca 5166365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5243649 - 5243611
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5243649 ttgaacgagtatttttaggtccaaaatcagggtataaca 5243611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10849381 - 10849343
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  10849381 ttgaacgagtatttttaggtccaaaatcagggtataaca 10849343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10908788 - 10908826
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  10908788 ttgaacgagtatttttaggtccaaaatcagggtataaca 10908826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10924323 - 10924361
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  10924323 ttgaacgagtatttttaggtccaaaatcagggtataaca 10924361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11417003 - 11417041
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  11417003 ttgaacgagtatttttaggtccaaaatcagggtataaca 11417041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14228025 - 14228063
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  14228025 ttgaacgagtatttttaggtccaaaatcagggtataaca 14228063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15921296 - 15921334
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15921296 ttgaacgagtatttttaggtccaaaatcagggtataaca 15921334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17099184 - 17099222
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  17099184 ttgaacgagtatttttaggtccaaaatcagggtataaca 17099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22975756 - 22975718
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22975756 ttgaacgagtatttttaggtccaaaatcagggtataaca 22975718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26504275 - 26504237
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26504275 ttgaacgagtatttttaggtccaaaatcagggtataaca 26504237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26506778 - 26506816
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26506778 ttgaacgagtatttttaggtccaaaatcagggtataaca 26506816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26588439 - 26588477
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26588439 ttgaacgagtatttttaggtccaaaatcagggtataaca 26588477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39204046 - 39204084
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  39204046 ttgaacgagtatttttaggtccaaaatcagggtataaca 39204084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39215417 - 39215455
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  39215417 ttgaacgagtatttttaggtccaaaatcagggtataaca 39215455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 12076444 - 12076477
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  12076444 agtatttttaggtccaaaatcagggtataacaat 12076477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 23762471 - 23762438
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  23762471 agtatttttaggtccaaaatcagggtataacaat 23762438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15851494 - 15851458
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataa 37  Q
    |||||| |||||| |||||||||||||||||||||||    
T  15851494 ttgaacgagtatttttaggtccaaaatcagggtataa 15851458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 26690994 - 26691030
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| |||||||||||| |||||||||||||||||    
T  26690994 agtatttttaggtccaaaaacagggtataacaatgat 26691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 30244128 - 30244160
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  30244128 agtatttttaggtccaaaatcagggtataacaa 30244160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35969430 - 35969390
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  35969430 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 35969390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35990842 - 35990802
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  35990842 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 35990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21083629 - 21083588
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  21083629 ttgaacgagtatttttaggtccaaaatcagggtataacaatg 21083588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15431728 - 15431688
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  15431728 ttgaacgagtatttttaggtccaaaatcagggtataacaat 15431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21729729 - 21729689
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  21729729 ttgaacgagtatttttaggtccaaaatcagggtataacaat 21729689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26795587 - 26795547
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  26795587 ttgaacgagtatttttaggtccaaaatcagggtataacaat 26795547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 8885421 - 8885460
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatgatcat 47  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  8885421 agtatttttaggtccaaaatcagggtataacaatcatcat 8885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14948614 - 14948575
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  14948614 ttgaacgagtatttttaggtccaaaatcagggtataacaa 14948575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15818896 - 15818935
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  15818896 ttgaacgagtatttttaggtccaaaatcagggtataacaa 15818935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16200402 - 16200440
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16200402 ttgaacgagtatttttaggtccaaaatcagggtataaca 16200440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18286599 - 18286561
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  18286599 ttgaacgagtatttttaggtccaaaatcagggtataaca 18286561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21889595 - 21889633
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21889595 ttgaacgagtatttttaggtccaaaatcagggtataaca 21889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33696152 - 33696114
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  33696152 ttgaacgagtatttttaggtccaaaatcagggtataaca 33696114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37887299 - 37887337
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  37887299 ttgaacgagtatttttaggtccaaaatcagggtataaca 37887337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46197499 - 46197537
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  46197499 ttgaacgagtatttttaggtccaaaatcagggtataaca 46197537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 9188606 - 9188638
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  9188606 agtatttttaggtccaaaatcagggtataacaa 9188638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 20324084 - 20324116
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  20324084 agtatttttaggtccaaaatcagggtataacaa 20324116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 46458276 - 46458244
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  46458276 agtatttttaggtccaaaatcagggtataacaa 46458244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 399 - 359
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  399 ttgaacgagtatttttaggtccaaaatcagggtataacaat 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1927 - 1967
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  1927 ttgaacgagtatttttaggtccaaaatcagggtataacaat 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21182 - 21222
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  21182 ttgaacgagtatttttaggtccaaaatcagggtataacaat 21222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 115559 - 115599
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  115559 ttgaacgagtatttttaggtccaaaatcagggtataacaat 115599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30927529 - 30927489
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  30927529 ttgaacgagtatttttaggtccaaaatcagggtataacaat 30927489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18081328 - 18081289
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  18081328 ttgaacgagtatttttaggtccaaaatcagggtataacaa 18081289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 573421 - 573459
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  573421 ttgaacgagtatttttaggtccaaaatcagggtataaca 573459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7813561 - 7813523
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  7813561 ttgaacaagtatttttaggtccaaaatcagggtacaaca 7813523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11543272 - 11543234
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  11543272 ttgaacgagtatttttaggtccaaaatcagggtataaca 11543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11557331 - 11557293
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  11557331 ttgaacgagtatttttaggtccaaaatcagggtataaca 11557293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18064270 - 18064308
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  18064270 ttgaacgagtatttttaggtccaaaatcagggtataaca 18064308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20196275 - 20196313
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  20196275 ttgaacgagtatttttaggtccaaaatcagggtataaca 20196313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20582624 - 20582662
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  20582624 ttgaacgagtatttttaggtccaaaatcagggtataaca 20582662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21504796 - 21504758
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21504796 ttgaacgagtatttttaggtccaaaatcagggtataaca 21504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22275171 - 22275209
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22275171 ttgaacgagtatttttaggtccaaaatcagggtataaca 22275209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22345036 - 22344998
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22345036 ttgaacgagtatttttaggtccaaaatcagggtataaca 22344998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22991299 - 22991337
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22991299 ttgaacgagtatttttaggtccaaaatcagggtataaca 22991337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23006296 - 23006334
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  23006296 ttgaacgagtatttttaggtccaaaatcagggtataaca 23006334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23728284 - 23728246
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  23728284 ttgaacgagtatttttaggtccaaaatcagggtataaca 23728246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23734982 - 23735020
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  23734982 ttgaacgagtatttttaggtccaaaatcagggtataaca 23735020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24614753 - 24614791
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24614753 ttgaacgagtatttttaggtccaaaatcagggtataaca 24614791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24711151 - 24711189
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24711151 ttgaacgagtatttttaggtccaaaatcagggtataaca 24711189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24744147 - 24744185
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24744147 ttgaacgagtatttttaggtccaaaatcagggtataaca 24744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24756915 - 24756953
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24756915 ttgaacgagtatttttaggtccaaaatcagggtataaca 24756953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24944961 - 24944923
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24944961 ttgaacgagtatttttaggtccaaaatcagggtataaca 24944923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25192847 - 25192809
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  25192847 ttgaacgagtatttttaggtccaaaatcagggtataaca 25192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25208235 - 25208197
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  25208235 ttgaacgagtatttttaggtccaaaatcagggtataaca 25208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25272391 - 25272353
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  25272391 ttgaacgagtatttttaggtccaaaatcagggtataaca 25272353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30954403 - 30954365
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  30954403 ttgaacgagtatttttaggtccaaaatcagggtataaca 30954365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33770398 - 33770360
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  33770398 ttgaacgagtatttttaggtccaaaatcagggtataaca 33770360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33785349 - 33785311
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  33785349 ttgaacgagtatttttaggtccaaaatcagggtataaca 33785311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34496160 - 34496198
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  34496160 ttgaacgagtatttttaggtccaaaatcagggtataaca 34496198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35874078 - 35874116
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  35874078 ttgaacgagtatttttaggtccaaaatcagggtataaca 35874116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37297330 - 37297368
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  37297330 ttgaacgagtatttttaggtccaaaatcagggtataaca 37297368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 19866321 - 19866354
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  19866321 agtatttttaggtccaaaatcagggtataacaat 19866354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30467726 - 30467759
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  30467726 agtatttttaggtccaaaatcagggtataacaat 30467759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30915579 - 30915612
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  30915579 agtatttttaggtccaaaatcagggtataacaat 30915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 3941348 - 3941316
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  3941348 agtatttttaggtccaaaatcagggtataacaa 3941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 16680017 - 16679985
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  16680017 agtatttttaggtccaaaatcagggtataacaa 16679985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23885112 - 23885072
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| ||||||| |||||||||||||||||||    
T  23885112 ttgaacgagtatttttaggtctaaaatcagggtataacaat 23885072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 37678890 - 37678926
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatgat 44  Q
    |||||| |||||||||||| |||||||||||||||||    
T  37678890 agtatttttaggtccaaaaacagggtataacaatgat 37678926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 41299045 - 41299013
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  41299045 agtatttttaggtccaaaatcagggtataacaa 41299013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4863019 - 4862979
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  4863019 ttgaacgagtatttttaggtccaaaatcagggtataacaat 4862979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19642266 - 19642306
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  19642266 ttgaacgagtatttttaggtccaaaatcagggtataacaat 19642306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30275832 - 30275792
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  30275832 ttgaacgagtatttttaggtccaaaatcagggtataacaat 30275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40560544 - 40560504
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  40560544 ttgaacgagtatttttaggtccaaaatcagggtataacaat 40560504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1668392 - 1668353
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  1668392 ttgaacgagtatttttaggtccaaaatcagggtataacaa 1668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10819577 - 10819616
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  10819577 ttgaacgagtatttttaggtccaaaatcagggtataacaa 10819616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17007064 - 17007025
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  17007064 ttgaacgagtatttttaggtccaaaatcagggtataacaa 17007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24599398 - 24599437
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  24599398 ttgaacgagtatttttaggtccaaaatcagggtataacaa 24599437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34845937 - 34845898
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  34845937 ttgaacgagtatttttaggtccaaaatcagggtataacaa 34845898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1640569 - 1640531
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  1640569 ttgaacgagtatttttaggtccaaaatcagggtataaca 1640531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1893317 - 1893279
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  1893317 ttgaacgagtatttttaggtccaaaatcagggtataaca 1893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1908116 - 1908078
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  1908116 ttgaacgagtatttttaggtccaaaatcagggtataaca 1908078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5202632 - 5202670
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5202632 ttgaacgagtatttttaggtccaaaatcagggtataaca 5202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5314775 - 5314737
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5314775 ttgaacgagtatttttaggtccaaaatcagggtataaca 5314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6559785 - 6559823
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  6559785 ttgaacgagtatttttaggtccaaaatcagggtataaca 6559823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9250472 - 9250510
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  9250472 ttgaacgagtatttttaggtccaaaatcagggtataaca 9250510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10273691 - 10273653
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  10273691 ttgaacgagtatttttaggtccaaaatcagggtataaca 10273653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13438546 - 13438508
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  13438546 ttgaacgagtatttttaggtccaaaatcagggtataaca 13438508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15198404 - 15198442
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15198404 ttgaacgagtatttttaggtccaaaatcagggtataaca 15198442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15370970 - 15371008
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15370970 ttgaactagtatttttaggtccaaaatcagggtataaca 15371008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15402471 - 15402509
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  15402471 ttgaactagtatttttaggtccaaaatcagggtataaca 15402509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16276108 - 16276070
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16276108 ttgaacgagtatttttaggtccaaaatcagggtataaca 16276070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16396716 - 16396754
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  16396716 ttgaacgagtatttttaggtccaaaatcagggtataaca 16396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17021027 - 17020989
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  17021027 ttgaacgagtatttttaggtccaaaatcagggtataaca 17020989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20306280 - 20306242
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  20306280 ttgaacaagtatttttaggtccaaaatcagggtacaaca 20306242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20754841 - 20754803
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  20754841 ttgaacgagtatttttaggtccaaaatcagggtataaca 20754803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24584571 - 24584609
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  24584571 ttgaacgagtatttttaggtccaaaatcagggtataaca 24584609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26409643 - 26409681
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26409643 ttgaacgagtatttttaggtccaaaatcagggtataaca 26409681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26463873 - 26463911
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26463873 ttgaacgagtatttttaggtccaaaatcagggtataaca 26463911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49286202 - 49286164
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  49286202 ttgaacgagtatttttaggtccaaaatcagggtataaca 49286164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 12783114 - 12783081
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  12783114 agtatttttaggtccaaaatcagggtataacaat 12783081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 15217015 - 15216982
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  15217015 agtatttttaggtccaaaatcagggtataacaat 15216982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 15378622 - 15378659
Alignment:
Q  2 tgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  15378622 tgaacgagtatttttaggtccaaaatcagggtataaca 15378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 15398557 - 15398594
Alignment:
Q  2 tgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  15398557 tgaacgagtatttttaggtccaaaatcagggtataaca 15398594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 17084390 - 17084357
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  17084390 agtatttttaggtccaaaatcagggtataacaat 17084357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 15384955 - 15384923
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  15384955 agtatttttaggtccaaaatcagggtataacaa 15384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18030378 - 18030418
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  18030378 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 18030418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 22729686 - 22729718
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  22729686 agtatttttaggtccaaaatcagggtataacaa 22729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 34196531 - 34196563
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  34196531 agtatttttaggtccaaaatcagggtataacaa 34196563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10750 - 10711
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  10750 ttgaacgagtatttttaggtccaaaatcagggtataacaa 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21324 - 21285
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  21324 ttgaacgagtatttttaggtccaaaatcagggtataacaa 21285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 683 - 722
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  683 ttgaacgagtatttttaggtccaaaatcagggtataacaa 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 44727 - 44692
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatga 43  Q
    |||||| |||||||||||||||||||||||||||||    
T  44727 agtatttttaggtccaaaatcagggtataacaatga 44692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 147948 - 147987
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  147948 ttgaacgagtatttttaggtccaaaatcagggtataacaa 147987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 154447 - 154408
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  154447 ttgaacaagtatttttaggtccaaaatcagggtacaacaa 154408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 169611 - 169650
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  169611 ttgaacgagtatttttaggtccaaaatcagggtataacaa 169650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 75488 - 75527
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  75488 ttgaacgagtatttttaggtccaaaatcagggtataacaa 75527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 384565 - 384599
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  384565 agtatttttaggtccaaaatcagggtataacaatg 384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 384741 - 384775
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatg 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  384741 agtatttttaggtccaaaatcagggtataacaatg 384775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6444 - 6406
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  6444 ttgaacgagtatttttaggtccaaaatcagggtataaca 6406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3277 - 3239
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  3277 ttgaacgagtatttttaggtccaaaatcagggtataaca 3239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5459 - 5421
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  5459 ttgaacgagtatttttaggtccaaaatcagggtataaca 5421  T

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Target: scaffold0322 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14058 - 14020
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  14058 ttgaacgagtatttttaggtccaaaatcagggtataaca 14020  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23226 - 23264
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  23226 ttgaacgagtatttttaggtccaaaatcagggtataaca 23264  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26984 - 26946
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26984 ttgaacgagtatttttaggtccaaaatcagggtataaca 26946  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29107 - 29069
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  29107 ttgaacgagtatttttaggtccaaaatcagggtataaca 29069  T

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Target: scaffold0089 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22729 - 22691
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  22729 ttgaacaagtatttttaggtccaaaatcagggtacaaca 22691  T

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Target: scaffold0089; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54330 - 54368
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  54330 ttgaacgagtatttttaggtccaaaatcagggtataaca 54368  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 56093 - 56131
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  56093 ttgaacgagtatttttaggtccaaaatcagggtataaca 56131  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 56859 - 56821
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  56859 ttgaacgagtatttttaggtccaaaatcagggtataaca 56821  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27165 - 27203
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataaca 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  27165 ttgaacgagtatttttaggtccaaaatcagggtataaca 27203  T

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Target: scaffold0181 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 21320 - 21287
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  21320 agtatttttaggtccaaaatcagggtataacaat 21287  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 18239 - 18272
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||||||||||||||||||||||||    
T  18239 agtatttttaggtccaaaatcagggtataacaat 18272  T

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Target: scaffold2096 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2096
Description:

Target: scaffold2096; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 1087 - 1055
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  1087 agtatttttaggtccaaaatcagggtataacaa 1055  T

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Target: scaffold0978 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 268 - 300
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  268 agtatttttaggtccaaaatcagggtataacaa 300  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 6517 - 6477
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaatgatcatc 48  Q
    |||||| |||||||||||||||||||||||||  |||||||    
T  6517 agtatttttaggtccaaaatcagggtataacatcgatcatc 6477  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 174 - 206
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  174 agtatttttaggtccaaaatcagggtataacaa 206  T

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Target: scaffold0524 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 11724 - 11692
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  11724 agtatttttaggtccaaaatcagggtataacaa 11692  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5910 - 5870
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  5910 ttgaacgagtatttttaggtccaaaatcagagtataacaat 5870  T

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Target: scaffold0093 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 3466 - 3434
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  3466 agtatttttaggtccaaaatcagggtataacaa 3434  T

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Target: scaffold0093; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 8089 - 8057
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  8089 agtatttttaggtccaaaatcagggtataacaa 8057  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 54817 - 54785
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  54817 agtatttttaggtccaaaatcagggtataacaa 54785  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 156610 - 156650
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  156610 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 156650  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 170340 - 170300
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| |||||||||||||||||||| ||||||    
T  170340 ttgaacgagtatttttaggtccaaaatcagggtacaacaat 170300  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 207518 - 207486
Alignment:
Q  8 agtattgttaggtccaaaatcagggtataacaa 40  Q
    |||||| ||||||||||||||||||||||||||    
T  207518 agtatttttaggtccaaaatcagggtataacaa 207486  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 224628 - 224668
Alignment:
Q  1 ttgaacaagtattgttaggtccaaaatcagggtataacaat 41  Q
    |||||| |||||| ||||||||||||| |||||||||||||    
T  224628 ttgaacgagtatttttaggtccaaaattagggtataacaat 224668  T

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