View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2898_high_48 (Length: 251)
Name: NF2898_high_48
Description: NF2898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2898_high_48 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 40057032 - 40056834
Alignment:
| Q |
2 |
acaatcacctcaaatttcttaccacaccaccctctctcaatcttaaacaatcttctctcctctttcacttccttactcaattccaaaaacaacatcaaaa |
101 |
Q |
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| T |
40057032 |
acaatcacctcaaatctcttaccacaccaccctctctcaatcttaaacattcttctctccactttcacttccttactcaattccaaaaacaacatcaaaa |
40056933 |
T |
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| Q |
102 |
cttattccaattcatttctaacaacctatgcactttccctcttcaattcaattccaaacccaacaacattcaccttcaacacactcattagaatccaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40056932 |
cttattccaattcatttctaacaacctatgcactttccctcttcaattcaattccaaacccaacaacattcaccttcaacacactcatcagaatccaca |
40056834 |
T |
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