View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2898_low_13 (Length: 434)

Name: NF2898_low_13
Description: NF2898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2898_low_13
NF2898_low_13
[»] chr4 (82 HSPs)
chr4 (3-261)||(44145842-44146100)
chr4 (296-434)||(44145706-44145844)
chr4 (135-369)||(17182490-17182731)
chr4 (136-365)||(55080581-55080815)
chr4 (141-369)||(22186717-22186950)
chr4 (138-367)||(56135749-56135965)
chr4 (163-367)||(7977530-7977741)
chr4 (138-328)||(43961449-43961644)
chr4 (163-367)||(37761465-37761673)
chr4 (163-365)||(47846090-47846298)
chr4 (163-371)||(54576362-54576577)
chr4 (183-367)||(29993826-29994015)
chr4 (183-332)||(4437480-4437633)
chr4 (183-369)||(5824899-5825085)
chr4 (184-367)||(51329796-51329983)
chr4 (167-367)||(21694929-21695132)
chr4 (278-367)||(49735468-49735557)
chr4 (184-308)||(54001162-54001289)
chr4 (367-434)||(44156199-44156266)
chr4 (174-365)||(34995052-34995247)
chr4 (3-84)||(44155971-44156052)
chr4 (274-367)||(54935067-54935161)
chr4 (301-370)||(46007879-46007948)
chr4 (197-310)||(9030272-9030391)
chr4 (274-369)||(35543448-35543543)
chr4 (154-370)||(47433734-47433956)
chr4 (298-369)||(54320609-54320680)
chr4 (203-363)||(55510173-55510338)
chr4 (302-367)||(31348500-31348565)
chr4 (256-364)||(51074344-51074459)
chr4 (284-365)||(54576329-54576410)
chr4 (298-371)||(54935244-54935317)
chr4 (277-365)||(47846417-47846505)
chr4 (322-369)||(49735691-49735738)
chr4 (246-367)||(29798288-29798410)
chr4 (305-369)||(16400798-16400862)
chr4 (236-363)||(27735749-27735881)
chr4 (285-369)||(37711285-37711369)
chr4 (135-269)||(11089619-11089756)
chr4 (284-351)||(21694906-21694973)
chr4 (278-365)||(27735900-27735987)
chr4 (300-371)||(37761641-37761712)
chr4 (199-277)||(14539367-14539445)
chr4 (299-369)||(26166935-26167005)
chr4 (298-367)||(1968534-1968603)
chr4 (298-367)||(6938422-6938491)
chr4 (185-367)||(17938164-17938352)
chr4 (322-367)||(37711138-37711183)
chr4 (284-364)||(29993774-29993854)
chr4 (298-370)||(34995224-34995296)
chr4 (313-369)||(35565556-35565612)
chr4 (84-144)||(44156147-44156207)
chr4 (237-369)||(45132610-45132741)
chr4 (298-369)||(45741888-45741959)
chr4 (299-365)||(2247977-2248043)
chr4 (325-367)||(41174547-41174589)
chr4 (201-251)||(51075218-51075268)
chr4 (238-332)||(41227518-41227614)
chr4 (326-367)||(53260718-53260759)
chr4 (324-364)||(5731032-5731072)
chr4 (327-367)||(54320435-54320475)
chr4 (335-369)||(41174354-41174388)
chr4 (333-370)||(27775580-27775617)
chr4 (325-362)||(34110803-34110840)
chr4 (298-367)||(45742065-45742134)
chr4 (300-364)||(4437428-4437492)
chr4 (298-369)||(31348314-31348390)
chr4 (313-369)||(47694347-47694403)
chr4 (322-369)||(5730828-5730875)
chr4 (335-369)||(4437626-4437660)
chr4 (285-342)||(7977520-7977578)
chr4 (154-232)||(35543333-35543411)
chr4 (335-369)||(56135933-56135967)
chr4 (300-377)||(23332709-23332786)
chr4 (298-367)||(24565346-24565415)
chr4 (313-369)||(1968349-1968405)
chr4 (299-367)||(5825072-5825140)
chr4 (144-220)||(11842325-11842401)
chr4 (337-369)||(22920979-22921011)
chr4 (337-369)||(22970788-22970820)
chr4 (283-327)||(32192847-32192891)
chr4 (323-351)||(49735667-49735695)
[»] chr8 (60 HSPs)
chr8 (163-367)||(12022178-12022387)
chr8 (135-332)||(39449339-39449546)
chr8 (174-367)||(8815187-8815385)
chr8 (163-367)||(43732679-43732896)
chr8 (163-369)||(30365128-30365339)
chr8 (185-370)||(16024150-16024341)
chr8 (138-364)||(20472702-20472933)
chr8 (159-367)||(9933240-9933454)
chr8 (204-366)||(43826333-43826500)
chr8 (166-359)||(34196316-34196514)
chr8 (185-369)||(8671849-8672040)
chr8 (206-367)||(9434377-9434543)
chr8 (198-367)||(40633059-40633232)
chr8 (200-364)||(6453185-6453356)
chr8 (277-363)||(7394615-7394701)
chr8 (284-369)||(43732848-43732933)
chr8 (284-373)||(12022136-12022226)
chr8 (198-371)||(29937508-29937676)
chr8 (300-369)||(31543249-31543318)
chr8 (298-367)||(1027023-1027092)
chr8 (284-373)||(8815135-8815224)
chr8 (298-369)||(2248450-2248521)
chr8 (295-367)||(9718651-9718723)
chr8 (298-361)||(1281149-1281212)
chr8 (274-361)||(36308994-36309081)
chr8 (300-374)||(7503131-7503205)
chr8 (298-367)||(31543072-31543141)
chr8 (307-372)||(34196492-34196556)
chr8 (312-369)||(40632994-40633051)
chr8 (299-367)||(30365306-30365374)
chr8 (298-369)||(7979138-7979209)
chr8 (327-372)||(2481977-2482022)
chr8 (302-367)||(13404976-13405041)
chr8 (298-343)||(30581988-30582033)
chr8 (298-367)||(34634318-34634387)
chr8 (322-367)||(41103504-41103549)
chr8 (302-369)||(11033417-11033482)
chr8 (299-363)||(11575582-11575646)
chr8 (284-364)||(16024315-16024394)
chr8 (285-369)||(31738585-31738669)
chr8 (330-369)||(3726861-3726900)
chr8 (328-367)||(4247725-4247764)
chr8 (198-364)||(24243118-24243287)
chr8 (329-371)||(33922521-33922563)
chr8 (322-371)||(11785725-11785774)
chr8 (328-365)||(28083744-28083781)
chr8 (278-363)||(30479721-30479806)
chr8 (299-370)||(2412961-2413027)
chr8 (332-367)||(6315066-6315101)
chr8 (298-369)||(10028298-10028369)
chr8 (298-372)||(10028105-10028179)
chr8 (303-365)||(30479897-30479959)
chr8 (339-369)||(37032596-37032626)
chr8 (335-372)||(36308847-36308884)
chr8 (214-275)||(38198135-38198196)
chr8 (298-367)||(40990359-40990427)
chr8 (335-367)||(7502964-7502996)
chr8 (335-367)||(9718489-9718521)
chr8 (331-367)||(16652958-16652994)
chr8 (231-275)||(27487087-27487131)
[»] chr5 (67 HSPs)
chr5 (163-367)||(10204576-10204785)
chr5 (163-367)||(15986659-15986868)
chr5 (138-367)||(40305670-40305909)
chr5 (138-365)||(8551427-8551660)
chr5 (163-367)||(33744228-33744437)
chr5 (163-365)||(34980812-34981019)
chr5 (163-367)||(10043252-10043461)
chr5 (184-369)||(21580945-21581135)
chr5 (213-332)||(5688448-5688572)
chr5 (278-372)||(14245083-14245177)
chr5 (294-366)||(13634882-13634954)
chr5 (298-367)||(7544136-7544205)
chr5 (302-367)||(13634711-13634776)
chr5 (283-372)||(14245206-14245295)
chr5 (278-365)||(1657968-1658055)
chr5 (174-277)||(6382422-6382525)
chr5 (203-367)||(11436939-11437108)
chr5 (285-371)||(15858902-15858988)
chr5 (298-367)||(26414893-26414962)
chr5 (297-369)||(10476202-10476274)
chr5 (304-363)||(2550533-2550592)
chr5 (277-368)||(14684638-14684729)
chr5 (322-369)||(16938477-16938524)
chr5 (278-372)||(15986619-15986713)
chr5 (323-372)||(5688590-5688639)
chr5 (278-362)||(36363187-36363271)
chr5 (183-325)||(6597845-6597984)
chr5 (299-370)||(10204752-10204823)
chr5 (300-371)||(34980987-34981058)
chr5 (174-275)||(10043055-10043156)
chr5 (300-369)||(33744191-33744260)
chr5 (296-360)||(10043425-10043489)
chr5 (303-367)||(10476026-10476090)
chr5 (327-367)||(20147074-20147114)
chr5 (327-370)||(40305667-40305710)
chr5 (236-369)||(4373674-4373812)
chr5 (295-369)||(11756876-11756949)
chr5 (285-367)||(12035936-12036018)
chr5 (199-277)||(12036007-12036084)
chr5 (278-369)||(11437094-11437188)
chr5 (298-365)||(16501966-16502034)
chr5 (185-374)||(28279533-28279728)
chr5 (299-367)||(40815297-40815365)
chr5 (306-370)||(42681445-42681509)
chr5 (322-365)||(7544335-7544378)
chr5 (322-364)||(11757102-11757144)
chr5 (326-364)||(21581150-21581188)
chr5 (323-365)||(22022849-22022891)
chr5 (298-367)||(8502835-8502904)
chr5 (332-373)||(8503038-8503079)
chr5 (290-363)||(12036105-12036177)
chr5 (322-367)||(16938678-16938723)
chr5 (285-321)||(6382357-6382393)
chr5 (335-367)||(9856890-9856922)
chr5 (332-364)||(14681473-14681505)
chr5 (335-371)||(22023571-22023607)
chr5 (298-369)||(10650589-10650660)
chr5 (303-370)||(37551585-37551652)
chr5 (303-370)||(37654415-37654482)
chr5 (283-369)||(2183974-2184060)
chr5 (324-362)||(36363037-36363075)
chr5 (333-367)||(36392359-36392393)
chr5 (298-367)||(20513612-20513681)
chr5 (329-370)||(37607100-37607141)
chr5 (329-370)||(37779309-37779350)
chr5 (324-364)||(12600703-12600743)
chr5 (338-370)||(13298477-13298509)
[»] chr7 (68 HSPs)
chr7 (163-367)||(33519048-33519257)
chr7 (198-373)||(37925835-37926015)
chr7 (163-367)||(36267588-36267797)
chr7 (154-369)||(39646467-39646687)
chr7 (183-369)||(28074158-28074354)
chr7 (135-350)||(48013520-48013740)
chr7 (163-370)||(37620771-37620983)
chr7 (168-364)||(35421967-35422168)
chr7 (158-364)||(21857350-21857560)
chr7 (163-364)||(31364080-31364285)
chr7 (163-367)||(48881593-48881793)
chr7 (220-366)||(12670928-12671079)
chr7 (192-369)||(8122142-8122328)
chr7 (253-366)||(12682854-12682972)
chr7 (200-365)||(16833684-16833867)
chr7 (298-371)||(36267549-36267622)
chr7 (298-367)||(39856040-39856109)
chr7 (185-348)||(48015229-48015394)
chr7 (285-369)||(48881556-48881640)
chr7 (138-276)||(23116269-23116408)
chr7 (284-367)||(28074103-28074186)
chr7 (202-311)||(3215934-3216048)
chr7 (299-370)||(33519224-33519295)
chr7 (274-369)||(47390853-47390948)
chr7 (183-321)||(3143526-3143673)
chr7 (274-372)||(18795746-18795843)
chr7 (295-367)||(1051670-1051742)
chr7 (298-366)||(31571645-31571713)
chr7 (292-375)||(41496949-41497032)
chr7 (236-369)||(33655216-33655354)
chr7 (274-367)||(13771097-13771190)
chr7 (299-367)||(4833531-4833599)
chr7 (285-369)||(13770946-13771030)
chr7 (167-263)||(30592292-30592388)
chr7 (301-372)||(40282192-40282263)
chr7 (323-369)||(25887190-25887236)
chr7 (283-369)||(40196530-40196616)
chr7 (298-367)||(4835479-4835548)
chr7 (294-367)||(18231757-18231830)
chr7 (299-367)||(30592253-30592321)
chr7 (298-373)||(34228494-34228569)
chr7 (287-354)||(48147404-48147471)
chr7 (174-277)||(2087785-2087892)
chr7 (284-365)||(37926002-37926083)
chr7 (298-371)||(43230232-43230305)
chr7 (324-367)||(47391057-47391100)
chr7 (307-369)||(31553183-31553243)
chr7 (298-364)||(42306505-42306571)
chr7 (136-277)||(17852966-17853106)
chr7 (299-367)||(13425120-13425188)
chr7 (313-365)||(23116418-23116470)
chr7 (335-367)||(37417835-37417867)
chr7 (299-367)||(48015383-48015451)
chr7 (335-378)||(17852870-17852913)
chr7 (296-367)||(25887366-25887436)
chr7 (299-369)||(26365765-26365836)
chr7 (236-338)||(41497065-41497172)
chr7 (284-342)||(31364070-31364128)
chr7 (323-365)||(47230019-47230061)
chr7 (300-361)||(37620951-37621012)
chr7 (340-369)||(38749576-38749605)
chr7 (324-361)||(41008188-41008225)
chr7 (332-369)||(41008387-41008424)
chr7 (335-367)||(17853072-17853104)
chr7 (337-365)||(24970379-24970407)
chr7 (285-357)||(35422126-35422198)
chr7 (284-332)||(39646630-39646678)
chr7 (335-363)||(39646671-39646699)
[»] scaffold0095 (1 HSPs)
scaffold0095 (135-332)||(8182-8390)
[»] chr1 (56 HSPs)
chr1 (163-369)||(1085524-1085736)
chr1 (140-371)||(33643264-33643499)
chr1 (183-367)||(35927814-35928001)
chr1 (163-364)||(40709327-40709532)
chr1 (159-369)||(525133-525346)
chr1 (135-339)||(47071079-47071288)
chr1 (164-318)||(25268313-25268472)
chr1 (284-367)||(51303384-51303467)
chr1 (183-330)||(2506576-2506728)
chr1 (205-337)||(51303461-51303600)
chr1 (198-359)||(13386989-13387163)
chr1 (137-324)||(1344592-1344783)
chr1 (274-359)||(23536839-23536924)
chr1 (163-260)||(35512909-35513006)
chr1 (198-370)||(20607220-20607390)
chr1 (215-367)||(17622536-17622694)
chr1 (300-363)||(35512974-35513037)
chr1 (278-369)||(38509892-38509983)
chr1 (298-367)||(12234010-12234079)
chr1 (246-370)||(30010329-30010458)
chr1 (298-373)||(40094927-40095002)
chr1 (298-360)||(2859107-2859169)
chr1 (198-332)||(40287325-40287467)
chr1 (295-367)||(41498404-41498476)
chr1 (298-369)||(35349637-35349708)
chr1 (322-367)||(26324014-26324059)
chr1 (296-369)||(40709290-40709363)
chr1 (220-359)||(50079476-50079620)
chr1 (298-365)||(12234185-12234252)
chr1 (298-369)||(32951493-32951564)
chr1 (298-364)||(38510069-38510135)
chr1 (299-368)||(2858931-2859000)
chr1 (322-367)||(20607416-20607461)
chr1 (298-367)||(30010507-30010576)
chr1 (213-321)||(52707691-52707803)
chr1 (298-373)||(1085483-1085559)
chr1 (298-369)||(7444476-7444547)
chr1 (324-370)||(20576130-20576176)
chr1 (332-370)||(26941042-26941080)
chr1 (247-363)||(51597672-51597793)
chr1 (277-369)||(2470728-2470820)
chr1 (298-369)||(41498579-41498651)
chr1 (303-363)||(35512638-35512694)
chr1 (236-372)||(40095041-40095183)
chr1 (299-370)||(49832544-49832615)
chr1 (299-369)||(35927988-35928058)
chr1 (298-359)||(10391880-10391941)
chr1 (298-359)||(25268439-25268500)
chr1 (335-369)||(8529807-8529841)
chr1 (299-369)||(28770897-28770967)
chr1 (298-367)||(35349466-35349533)
chr1 (332-364)||(2470934-2470966)
chr1 (277-369)||(41676435-41676522)
chr1 (217-277)||(44210994-44211054)
chr1 (303-363)||(49946768-49946828)
chr1 (285-365)||(52428068-52428147)
[»] chr6 (51 HSPs)
chr6 (198-369)||(15353362-15353537)
chr6 (198-369)||(15323223-15323399)
chr6 (184-367)||(9051590-9051776)
chr6 (165-371)||(31798914-31799128)
chr6 (163-369)||(10293248-10293457)
chr6 (253-367)||(23090995-23091114)
chr6 (202-327)||(26318345-26318475)
chr6 (198-367)||(4097305-4097480)
chr6 (236-369)||(4097620-4097759)
chr6 (298-373)||(14515467-14515542)
chr6 (163-367)||(10818229-10818425)
chr6 (183-371)||(25468454-25468639)
chr6 (300-367)||(30487306-30487373)
chr6 (174-277)||(3841180-3841284)
chr6 (300-370)||(12811157-12811227)
chr6 (198-268)||(15373669-15373739)
chr6 (298-367)||(9721138-9721207)
chr6 (273-366)||(10818366-10818459)
chr6 (283-360)||(34177060-34177137)
chr6 (298-364)||(9719034-9719100)
chr6 (298-364)||(19278213-19278278)
chr6 (298-359)||(23091133-23091195)
chr6 (298-364)||(30487480-30487546)
chr6 (278-367)||(665841-665929)
chr6 (303-372)||(31849105-31849174)
chr6 (163-268)||(34176606-34176711)
chr6 (285-373)||(4097229-4097317)
chr6 (270-366)||(9719178-9719273)
chr6 (283-322)||(15373737-15373776)
chr6 (335-373)||(1300623-1300661)
chr6 (285-371)||(14515633-14515719)
chr6 (298-371)||(9051530-9051603)
chr6 (322-370)||(9298690-9298738)
chr6 (299-367)||(16738172-16738239)
chr6 (236-276)||(28477076-28477116)
chr6 (236-276)||(29692974-29693014)
chr6 (296-352)||(34176586-34176642)
chr6 (273-316)||(5287471-5287514)
chr6 (274-364)||(30850063-30850153)
chr6 (270-371)||(9721285-9721385)
chr6 (299-359)||(10293424-10293484)
chr6 (333-369)||(21607054-21607090)
chr6 (300-364)||(26318482-26318546)
chr6 (292-367)||(1300789-1300864)
chr6 (284-367)||(3841247-3841330)
chr6 (294-364)||(5585304-5585375)
chr6 (299-362)||(19278039-19278102)
chr6 (298-369)||(33235949-33236020)
chr6 (278-332)||(31849265-31849319)
chr6 (335-367)||(21606854-21606886)
chr6 (324-364)||(33041473-33041513)
[»] chr2 (65 HSPs)
chr2 (184-367)||(31061359-31061547)
chr2 (183-367)||(45257307-45257496)
chr2 (174-369)||(42296349-42296549)
chr2 (205-359)||(33265615-33265773)
chr2 (202-365)||(3094427-3094595)
chr2 (201-367)||(2381060-2381231)
chr2 (184-366)||(1052811-1053000)
chr2 (205-360)||(31928121-31928286)
chr2 (198-367)||(34187575-34187751)
chr2 (198-333)||(15085770-15085911)
chr2 (245-367)||(1270394-1270522)
chr2 (185-363)||(35325271-35325456)
chr2 (186-318)||(45098218-45098355)
chr2 (253-370)||(17333936-17334059)
chr2 (298-369)||(22356179-22356250)
chr2 (278-367)||(23748250-23748339)
chr2 (159-271)||(36052118-36052230)
chr2 (302-369)||(35736173-35736240)
chr2 (298-369)||(36347716-36347787)
chr2 (301-367)||(35736365-35736431)
chr2 (322-371)||(17379842-17379891)
chr2 (243-367)||(41778773-41778902)
chr2 (236-367)||(15224802-15224938)
chr2 (284-367)||(42813781-42813864)
chr2 (236-365)||(16713494-16713628)
chr2 (198-275)||(8554369-8554446)
chr2 (244-316)||(22356016-22356093)
chr2 (237-367)||(886919-887051)
chr2 (298-370)||(887285-887356)
chr2 (171-276)||(9313079-9313188)
chr2 (201-332)||(21502067-21502204)
chr2 (254-372)||(23739882-23740005)
chr2 (298-365)||(36046377-36046443)
chr2 (303-372)||(2380987-2381057)
chr2 (164-266)||(42813726-42813828)
chr2 (298-369)||(45257482-45257553)
chr2 (325-367)||(17380043-17380085)
chr2 (298-364)||(31795772-31795838)
chr2 (298-367)||(9631735-9631804)
chr2 (322-371)||(40022359-40022407)
chr2 (303-362)||(8427051-8427110)
chr2 (273-332)||(14196819-14196878)
chr2 (306-361)||(31061543-31061598)
chr2 (299-365)||(9426987-9427053)
chr2 (324-370)||(15224142-15224188)
chr2 (327-369)||(31795968-31796010)
chr2 (284-330)||(33265767-33265813)
chr2 (299-365)||(41841684-41841750)
chr2 (300-365)||(8426881-8426946)
chr2 (298-367)||(36347541-36347610)
chr2 (298-366)||(36046205-36046273)
chr2 (298-365)||(2241413-2241479)
chr2 (318-369)||(8554446-8554497)
chr2 (329-364)||(12541773-12541808)
chr2 (304-367)||(17331415-17331478)
chr2 (274-365)||(40022524-40022615)
chr2 (335-369)||(23748103-23748137)
chr2 (163-277)||(31795804-31795918)
chr2 (334-364)||(36567063-36567093)
chr2 (337-370)||(9427200-9427233)
chr2 (328-369)||(16713730-16713771)
chr2 (327-364)||(19567020-19567057)
chr2 (165-221)||(14187111-14187167)
chr2 (243-369)||(21662324-21662456)
chr2 (202-234)||(22356141-22356173)
[»] chr3 (71 HSPs)
chr3 (138-367)||(41414078-41414313)
chr3 (139-328)||(40858604-40858798)
chr3 (165-361)||(16884010-16884209)
chr3 (163-369)||(34641000-34641199)
chr3 (183-361)||(10943669-10943852)
chr3 (183-363)||(17474261-17474446)
chr3 (186-364)||(21090129-21090312)
chr3 (138-332)||(48683647-48683848)
chr3 (205-367)||(44412361-44412528)
chr3 (183-367)||(24253721-24253911)
chr3 (154-365)||(42772046-42772250)
chr3 (163-362)||(26135807-26136006)
chr3 (167-355)||(18086019-18086218)
chr3 (213-374)||(27197734-27197900)
chr3 (284-365)||(44412522-44412603)
chr3 (164-326)||(8432297-8432462)
chr3 (205-332)||(46978462-46978594)
chr3 (185-332)||(42699669-42699821)
chr3 (284-367)||(34641151-34641234)
chr3 (298-369)||(28582684-28582755)
chr3 (274-367)||(24560217-24560310)
chr3 (287-369)||(5961933-5962014)
chr3 (284-369)||(24253883-24253968)
chr3 (274-369)||(220548-220643)
chr3 (299-372)||(24560393-24560466)
chr3 (199-302)||(36727242-36727349)
chr3 (298-363)||(55428554-55428619)
chr3 (285-365)||(26135959-26136039)
chr3 (138-373)||(30200098-30200345)
chr3 (300-361)||(27541937-27541998)
chr3 (332-369)||(37102348-37102385)
chr3 (298-367)||(41110496-41110565)
chr3 (330-371)||(54574563-54574604)
chr3 (131-361)||(54985696-54985943)
chr3 (324-364)||(18654802-18654842)
chr3 (298-373)||(21773776-21773851)
chr3 (298-365)||(41110323-41110390)
chr3 (298-373)||(52474090-52474165)
chr3 (313-367)||(5903549-5903603)
chr3 (327-373)||(9312470-9312516)
chr3 (324-370)||(36568901-36568947)
chr3 (299-364)||(6803377-6803442)
chr3 (322-367)||(25655171-25655216)
chr3 (299-364)||(28581189-28581254)
chr3 (198-259)||(55428492-55428553)
chr3 (331-367)||(651740-651776)
chr3 (307-367)||(8432261-8432321)
chr3 (327-367)||(9312673-9312713)
chr3 (302-374)||(25499074-25499146)
chr3 (294-346)||(25654991-25655043)
chr3 (335-371)||(30200094-30200130)
chr3 (327-363)||(31664391-31664427)
chr3 (327-363)||(31931969-31932005)
chr3 (134-222)||(37102155-37102243)
chr3 (332-376)||(42772231-42772275)
chr3 (299-362)||(14897981-14898044)
chr3 (322-369)||(18654598-18654645)
chr3 (298-365)||(23028101-23028168)
chr3 (243-369)||(46204884-46205015)
chr3 (329-363)||(10748299-10748333)
chr3 (335-369)||(48683816-48683850)
chr3 (328-369)||(16275900-16275941)
chr3 (335-367)||(2387962-2387994)
chr3 (323-363)||(12790377-12790417)
chr3 (329-365)||(14897897-14897933)
chr3 (299-367)||(16883974-16884041)
chr3 (329-373)||(27197677-27197721)
chr3 (335-367)||(37102159-37102191)
chr3 (333-369)||(41039948-41039984)
chr3 (335-371)||(42699814-42699850)
chr3 (298-362)||(52473920-52473984)
[»] scaffold0026 (3 HSPs)
scaffold0026 (198-367)||(1467-1642)
scaffold0026 (283-364)||(1175-1256)
scaffold0026 (303-375)||(1390-1461)
[»] scaffold0119 (2 HSPs)
scaffold0119 (183-367)||(37383-37572)
scaffold0119 (245-367)||(30715-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (133-369)||(52894-53122)
[»] scaffold0012 (2 HSPs)
scaffold0012 (183-370)||(184608-184796)
scaffold0012 (300-363)||(184784-184847)
[»] scaffold0007 (2 HSPs)
scaffold0007 (163-277)||(242311-242425)
scaffold0007 (284-368)||(242377-242461)
[»] scaffold0067 (2 HSPs)
scaffold0067 (274-367)||(39341-39434)
scaffold0067 (298-369)||(39184-39256)
[»] scaffold1414 (1 HSPs)
scaffold1414 (201-312)||(355-473)
[»] scaffold0096 (1 HSPs)
scaffold0096 (299-369)||(6582-6652)
[»] scaffold0198 (1 HSPs)
scaffold0198 (299-364)||(3150-3215)
[»] scaffold0240 (2 HSPs)
scaffold0240 (183-272)||(17640-17729)
scaffold0240 (299-373)||(17716-17788)
[»] scaffold0262 (1 HSPs)
scaffold0262 (294-367)||(16296-16369)
[»] scaffold0027 (1 HSPs)
scaffold0027 (283-365)||(121987-122068)
[»] scaffold0006 (1 HSPs)
scaffold0006 (215-263)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 44146100 - 44145842
Alignment:
Q  3 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacttttaa 102  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44146100 aaaagaagtcttaagctaagagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacctttaa 44146001  T
Q  103 ttacttatattaattctttttgacttactttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 202  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44146000 ttacttatattaattctttttgacttactttattaagggtgtatttggaaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 44145901  T
Q  203 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 261  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  44145900 tataaaatgatttttaaaaaattgaattaacagcattataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 296 - 434
Target Start/End: Complemental strand, 44145844 - 44145706
Alignment:
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtgtttactttgtagttctctaat 395  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  44145844 ttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccctaagagtatttactttgtagttctctaat 44145745  T
Q  396 cttcatacgagtaagacatgagttaaacaactctgcatt 434  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  44145744 cttcatacgtgtaagacatgagttaaacaactctgcatt 44145706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 369
Target Start/End: Original strand, 17182490 - 17182731
Alignment:
Q  135 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgattttta--aaaaattgaattaa 232  Q
    |||| |||||||||||  ||||| |||||||||||| |  |||| || ||||||||| |||  ||| ||||||||||||||||   ||||||||||||||    
T  17182490 ttaaaggtgtgtttggatagaggttttaggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaa 17182589  T
Q  233 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 327  Q
    ||  ||||| ||||||||| |||||||||||||||||||||||||     |||| | ||||||| |||||||||||||||||||||||||| || |||||    
T  17182590 caatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaatattttaccttgttcgtaatttaaaaaataaaagtaagtcctcc 17182689  T
Q  328 cctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    | ||| |||||||| |||||||||||||||||||||||||||    
T  17182690 cttcctttcccctcataaaccctcaatccaaacacaccctaa 17182731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 136 - 365
Target Start/End: Complemental strand, 55080815 - 55080581
Alignment:
Q  136 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 235  Q
    |||||||||||||||   |||||||||||| |||||| ||||| || ||||||||| |||   |||||||||||| ||||||| |||||| ||||||||     
T  55080815 taagggtgtgtttggatggagggtttaggatgggaggacttacttttcttttttaaattacgaacattataaaataatttttagaaaatttaattaacaa 55080716  T
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| |||||||||  ||||||||||||||||||||     ||| |||| |||||||||||||||||||||||| ||||||||| ||| || || |||    
T  55080715 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttcgtaatttacaaaataaaaatgaaccatctcct 55080616  T
Q  331 cccttcccctcctaaaccctcaatccaaacacacc 365  Q
    | ||||| |||||||||||||||||||||||||||    
T  55080615 ctcttcctctcctaaaccctcaatccaaacacacc 55080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 141 - 369
Target Start/End: Complemental strand, 22186950 - 22186717
Alignment:
Q  141 gtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatga 240  Q
    ||||||||||   |||||||||  |||||||| || || || ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||    
T  22186950 gtgtgtttggatggagggtttaaaaggggaggactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatga 22186851  T
Q  241 tcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccctt 335  Q
    | |||||| || |||||||||||||||||     ||| |||||||| ||||||||| ||||| |||||||||||| ||||||||| | || |||||||||    
T  22186850 taaatgattatataatacttcaaaaacactttatttattttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactctgccctccctt 22186751  T
Q  336 cccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||| |||||||||||||||||||| |||||||||    
T  22186750 cccttcctaaaccctcaatccaaatacaccctaa 22186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 56135965 - 56135749
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 237  Q
    |||||||||||||   ||||||||||||||||||||||||| || ||||||||| ||||||               ||||| |||||||||||||||       
T  56135965 agggtgtgtttggatggagggtttaggaggggagggcttacttttcttttttaaattaaag---------------ttttagaaaattgaattaaca--- 56135884  T
Q  238 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    |||| ||||||||| |||||||||||||||||||||||||     |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  56135883 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcc 56135784  T
Q  333 cttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||||||||    
T  56135783 cttcccctcctaaaccctcaatccaaacacaccct 56135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 7977530 - 7977741
Alignment:
Q  163 ggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 261  Q
    |||||||||||||||| || ||||||| || |||   |||||||||||| || |||  ||||||||||||||| |||||| ||||||||| |||||||||    
T  7977530 ggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatgataaatgatcatataatacttc 7977629  T
Q  262 aaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 355  Q
    ||||||| ||||||||      |||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  7977630 aaaaacaattaatttactttaaaaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatc 7977729  T
Q  356 caaacacaccct 367  Q
    ||||||||||||    
T  7977730 caaacacaccct 7977741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 138 - 328
Target Start/End: Complemental strand, 43961644 - 43961449
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 237  Q
    |||||||||||||   ||||| ||| ||||||||||||||  || ||||||||| |||   |||||||||||||||||||| |||||||||||| || ||    
T  43961644 agggtgtgtttggatggagggattatgaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaaca 43961545  T
Q  238 tgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 328  Q
    |||| ||||||||| |||||||||||||||||||||     |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  43961544 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaagtgagccctccc 43961449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 37761673 - 37761465
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||| | || ||||||||| |||  |||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  37761673 ggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 37761574  T
Q  263 aaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaa 358  Q
    |||||||||||||||    |||| | ||||||  |||||||||||||||||| ||||||||| | || |||||| ||| |||||||||| ||||||||||    
T  37761573 aaaacacttaatttattctaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaa 37761474  T
Q  359 acacaccct 367  Q
    |||||||||    
T  37761473 acacaccct 37761465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 365
Target Start/End: Original strand, 47846090 - 47846298
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||| | |||| || ||||||||| ||   ||||||||||||| ||||||| ||||||||||||| | |||||| ||| ||||| ||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttca 47846189  T
Q  263 aaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 356  Q
    |||||||||||||||      |||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||||| |||| ||||||||||||||    
T  47846190 aaaacacttaatttattttaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatcc 47846289  T
Q  357 aaacacacc 365  Q
    |||||||||    
T  47846290 aaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 371
Target Start/End: Original strand, 54576362 - 54576577
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||||| || ||||||||  |||  |||||||||||||||||| || ||||||||||||||| | |||| |||||| || ||||||||||    
T  54576362 ggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaattaacaacgtgataaatgattatataatacttca 54576461  T
Q  263 aaaacacttaattt-------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 355  Q
    |||||| |||||||       ||||| ||||||||| |||||||||||||||||| ||||||||| | || | ||||||||| ||| |||||||| ||||    
T  54576462 aaaacatttaatttatttaaaaaaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatc 54576561  T
Q  356 caaacacaccctaaga 371  Q
    ||||||||||||||||    
T  54576562 caaacacaccctaaga 54576577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 183 - 367
Target Start/End: Original strand, 29993826 - 29994015
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----tta 277  Q
    ||||||||| |||  |||| |||||||||||||||| ||||||||||||||| ||||||  ||||| || |||||||||||||| |||||||     |||    
T  29993826 cttttttaaattacggacactataaaatgatttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaatacttaatctatttta 29993925  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| || ||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||| ||| |||| |||| ||||||    
T  29993926 aaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaaccctcccctccatttccctcctaaatccttaatctaaactcaccct 29994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 332
Target Start/End: Original strand, 4437480 - 4437633
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 278  Q
    ||||||||| |||  || |||||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||| |||||         
T  4437480 cttttttaaattatggatattataaaatgatttttaaaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttgatttattttt 4437579  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    ||| |||||||||||||||  ||||||||||||||||| ||| |||||||||||    
T  4437580 aaaaacattttacattgtttttaatttaaaaaataaaaatgaaccctcccctcc 4437633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 5825085 - 5824899
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaag 282  Q
    ||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||    || |||    ||| |||||| |     
T  5825085 cttttttgaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataaccaatccaaacattttattttaaacaa 5824986  T
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||  ||| | ||||| ||| ||||||||||||||||||||||||||    
T  5824985 acattttacatttttcgtaatttaaaaaataaaaatgagcactaaccttcattcccttccaaaaccctcaatccaaacacaccctaa 5824899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 367
Target Start/End: Complemental strand, 51329983 - 51329796
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 278  Q
    |||||||| |||  || |||||||||| |||| || |||||||||||||||  ||||| |||||| || |||||||||||||| ||||||||||     |    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatgataaatgattatataatacttcaaaaa-acttaatttattttaa 51329885  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||| |||||||   |||||||||||||||||| ||||| ||| | |||| ||  ||||||||||||||| |||||||||||||||||||    
T  51329884 aaaaacattttgtgttgttcgtaatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacaccct 51329796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 167 - 367
Target Start/End: Original strand, 21694929 - 21695132
Alignment:
Q  167 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaa 266  Q
    |||||||||||| || ||||||||| |||  |||| ||||||||| ||||||| |||||||| |||||  ||||| ||||||||| |||||||||||  |    
T  21694929 gggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-aatgatcatataatacttcaatca 21695027  T
Q  267 cacttaattt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||||    ||||| | |  ||| ||||| | |||||||||| | |||||| | |||||| || |||||||||| ||||||| ||||||||||||    
T  21695028 cacttaatttattaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacac 21695127  T
Q  363 accct 367  Q
    |||||    
T  21695128 accct 21695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 367
Target Start/End: Complemental strand, 49735557 - 49735468
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||| |  |||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49735557 aaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 54001162 - 54001289
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac------ttaattta 277  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||   |||||| ||||||||| |||||||||||||||||      ||| ||||    
T  54001162 ttttttaaattacggacattataaaataatttttaaaaaattgaattaa---catgataaatgatcatataatacttcaaaaacacttttatttatttta 54001258  T
Q  278 aaaagacattttacattgttcgtaatttaaa 308  Q
    ||||||||||||||||||||||| |||||||    
T  54001259 aaaagacattttacattgttcgtgatttaaa 54001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 44156199 - 44156266
Alignment:
Q  367 taagagtgtttactttgtagttctctaatcttcatacgagtaagacatgagttaaacaactctgcatt 434  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44156199 taagagtgtttactatgtaattctctaatcttcatacgagtaagacatgagttaaacaactctgcatt 44156266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 365
Target Start/End: Complemental strand, 34995247 - 34995052
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 273  Q
    ||||| || ||||||||| |||  || ||||| |||||||||||| |||||||||||||   |||||| ||| ||| | |||||||||||||||||||||    
T  34995247 cttacttttcttttttaaattacggatattatcaaatgatttttagaaaattgaattaaa--catgataaataatcttataatacttcaaaaacacttaa 34995150  T
Q  274 tttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgag-ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||      ||| |||||| |||||||||||||||||||||||||||||| | |  |||| |||||||| |||  || |||||||| ||||||||||    
T  34995149 tttattttagaaaaacatttcacattgttcgtaatttaaaaaataaaagtgtgtcattcccttcccttcctctctcaacccctcaattcaaacacacc 34995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 44155971 - 44156052
Alignment:
Q  3 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagataca 84  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||||    
T  44155971 aaaagaagtcttaagctacgagaattcacaagaaagttggtaaaatcactaaaatggggaatatgaattaaaagtagataca 44156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 54935161 - 54935067
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||| |||| ||| || ||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  54935161 tttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccct 54935067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 46007879 - 46007948
Alignment:
Q  301 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacactctaag 46007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 310
Target Start/End: Complemental strand, 9030391 - 9030272
Alignment:
Q  197 agacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacatttta 290  Q
    |||||||||||||||||||||| |||||| |||||| |  ||||| |||||| || |||||||| ||||||||||||||||      |||| ||||||||    
T  9030391 agacattataaaatgatttttagaaaatttaattaataaaatgataaatgattatataatactttaaaaacacttaatttattgtttaaaaaacatttta 9030292  T
Q  291 cattgttcgtaatttaaaaa 310  Q
    | ||||||||||||||||||    
T  9030291 cgttgttcgtaatttaaaaa 9030272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 369
Target Start/End: Original strand, 35543448 - 35543543
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||| | |||||||  |||||||||||| |||||||||||||||| ||||| ||  |||||||| ||||||||||||||||||||| |||||    
T  35543448 tttaaaaaaatattttactatgttcgtaattttaaaaataaaagtgagctctcccatcatttcccctcataaaccctcaatccaaacacatcctaa 35543543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 370
Target Start/End: Original strand, 47433734 - 47433956
Alignment:
Q  154 gagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatg 252  Q
    ||||||||||||||||| ||| |||  || | ||||||| |||  ||||||||  |||| ||||||||||||| || ||| | ||| || || ||||||     
T  47433734 gagggtttaggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat-ataaacgatcata 47433832  T
Q  253 taatacttcaaaaacacttaattta-----aaaagacattttac-attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaa 346  Q
    |||||||||||  ||||||||||||     |||| |||| |||  || ||  ||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  47433833 taatacttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaa 47433932  T
Q  347 ccctcaatccaaacacaccctaag 370  Q
    || |||| ||||||||||||||||    
T  47433933 ccgtcaacccaaacacaccctaag 47433956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 54320609 - 54320680
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||| |||||   | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54320609 cgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 55510338 - 55510173
Alignment:
Q  203 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgtt 297  Q
    |||||||| ||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||   ||||||||     |||||||| ||||||||||||||     
T  55510338 tataaaat-attttaaaaaaattgaaataacaacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtc 55510240  T
Q  298 cgtaatttaaaaaataaaagtgagccctcccct-cccttcccctcctaaaccctcaatccaaacaca 363  Q
      ||| |||||||  |||||| || |||||||| ||||||||  ||||| |||||||||||||||||    
T  55510239 tttaaattaaaaatgaaaagtaagtcctcccctccccttccctccctaacccctcaatccaaacaca 55510173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 31348500 - 31348565
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccct 31348565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 51074459 - 51074344
Alignment:
Q  256 tacttcaaaaacacttaattta-------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 348  Q
    ||||||||||||||||||||||       |||| ||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| |    
T  51074459 tacttcaaaaacacttaatttattaaaaaaaaaaacactttacaatgttcataatttaaaaaataaaagtgagccctcccgtcctttctcctcctaaatc 51074360  T
Q  349 ctcaatccaaacacac 364  Q
    || || ||||||||||    
T  51074359 cttaacccaaacacac 51074344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 54576410 - 54576329
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||| | ||| |||||| ||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  54576410 cattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 54935244 - 54935317
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||||  |||| | | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54935244 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaga 54935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 47846417 - 47846505
Alignment:
Q  277 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| | || |||  ||||||| |||| |||||||||||||||||||||||    
T  47846417 aaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 49735691 - 49735738
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49735691 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 49735738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 367
Target Start/End: Complemental strand, 29798410 - 29798288
Alignment:
Q  246 gatcatgtaatacttcaaaaacacttaatttaa-aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctccta 344  Q
    |||||| |||||||||||  |||||| |||||| ||| |||| ||| || ||  |||||||||||||||||||| | |  ||| ||| ||||||||||||    
T  29798410 gatcatataatacttcaatcacacttgatttaagaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctccta 29798311  T
Q  345 aaccctcaatccaaacacaccct 367  Q
    |||| ||||||||||||||||||    
T  29798310 aaccatcaatccaaacacaccct 29798288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 16400862 - 16400798
Alignment:
Q  305 taaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  16400862 taaaaaataaaagtgaatcctcccctcccttctcctcctaaaccctcaatccaatcacacactaa 16400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 27735881 - 27735749
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| ||||||||| |||||||||||  ||||||||||||     |||| |||| ||| || || |||||||||||||  |||| | | ||||| | |    
T  27735881 catgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctctt 27735782  T
Q  331 cccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||||||||||| |||||||||||    
T  27735781 cccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 37711285 - 37711369
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| | ||| |||||||||||||  |||  | | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 37711369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 11089756 - 11089619
Alignment:
Q  135 ttaagggtgtgtttgggaagagggtttaggaggggagg---gcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatta 231  Q
    ||||||||||||||||   |||| ||||| |||||| |   | ||||||| ||||||||| |||  ||| |||||||||  |||||| ||||||||||||    
T  11089756 ttaagggtgtgtttggattgaggatttagaaggggaagatggtttacatttcttttttaaattacggactttataaaatattttttagaaaattgaatta 11089657  T
Q  232 acagcatgatcaatgatcatgtaatacttcaaaaacac 269  Q
    ||| ||| || ||||||||| || ||||||||||||||    
T  11089656 acaacatcataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 351
Target Start/End: Complemental strand, 21694973 - 21694906
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctc 351  Q
    ||||||| | ||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  21694973 cattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccctc 21694906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 365
Target Start/End: Original strand, 27735900 - 27735987
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||| |||||||| | ||| |||||||||||||  |||| ||| ||||  |||||||||||||||||||||||| |||||||||||||    
T  27735900 aaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 37761641 - 37761712
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||| |||||  |||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  37761641 taatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccctaaga 37761712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 14539445 - 14539367
Alignment:
Q  199 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 277  Q
    ||||||||||||| || ||| |||||| |||||| | ||| || ||||||||| |||||||||||||||||||||||||    
T  14539445 acattataaaatgtttgttagaaaattaaattaagaacataataaatgatcatataatacttcaaaaacacttaattta 14539367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 26167005 - 26166935
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||| ||||   | | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  26167005 gtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaacacaccctaa 26166935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 1968534 - 1968603
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||| | | | || |||||||||||||||||||||||||||||||||||||||||    
T  1968534 cgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccct 1968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 6938422 - 6938491
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||||| ||||||||||| |||||||| |||||| || |||||||||||||||    
T  6938422 cgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 17938164 - 17938352
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 278  Q
    ||||||| |||  ||||||||  |||| |||||||||| || || ||| | |||||| || |||||| |||||||||||  ||||||||||||      |    
T  17938164 tttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttatttaaaa 17938263  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||| | || ||| || ||| ||||||||||||| |||||| | | |||  ||||||||||||||||||  ||||||||||||| |||||    
T  17938264 aaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaacataccct 17938352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 37711183 - 37711138
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37711183 ccctcccttcccttcccctcctaaaccctcaatccaaacacaccct 37711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 29993854 - 29993774
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||| | ||| |||||||||||||| ||||  ||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  29993854 cattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacac 29993774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 34995224 - 34995296
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||| |||||| || | | ||||| |||||| |||||||||||||||| ||||||||||||||    
T  34995224 cgtaatttaaaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacaccctaag 34995296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 35565612 - 35565556
Alignment:
Q  313 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  35565612 aaaagtaagccctcccctcccttcccctgctaaaccctcaatccaaacgcactctaa 35565556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 44156147 - 44156207
Alignment:
Q  84 atgatagtactacttttaattacttatattaattctttttgacttactttattaagggtgt 144  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  44156147 atgatagtattacctttaattacttatattaattctctttgacttattttattaagagtgt 44156207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 45132610 - 45132741
Alignment:
Q  237 atgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttc 336  Q
    ||||| || |||||| |||||||||||  ||||||||||||     |||| ||| || || |||||||||||||| |||||| | || || |||| ||||    
T  45132610 atgataaacgatcatataatacttcaatcacacttaatttatttt-acatattatatagtccgtaatttaaaaaagaaaagtaaaccatctcctctcttc 45132708  T
Q  337 ccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||| |||||| ||||||||||||||    
T  45132709 ccctcctaaactctcaattcaaacacaccctaa 45132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 45741959 - 45741888
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| |  |||| | | | ||||||||||||||||||||||||||||||||||||    
T  45741959 cgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaacacaccctaa 45741888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 2247977 - 2248043
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||| |||||| | | ||||| || |||| ||||||||||||||||||||||||||||    
T  2247977 gtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacacc 2248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 41174547 - 41174589
Alignment:
Q  325 tcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 51075268 - 51075218
Alignment:
Q  201 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcat 251  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatgataaatgatcat 51075218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 41227614 - 41227518
Alignment:
Q  238 tgatcaatgatcatgtaatacttcaaaaacacttaattta--aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    |||| ||||||||| |||||||||||  |||||||||||   ||| ||||||||| ||||||| |||||||||||| | |||| |||||| ||||||    
T  41227614 tgataaatgatcatataatacttcaatcacacttaattttttaaatgacattttatattgttcataatttaaaaaagagaagtaagccctgccctcc 41227518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 53260759 - 53260718
Alignment:
Q  326 cccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccct 53260718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 5731032 - 5731072
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 54320475 - 54320435
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  54320475 ccctccctttccctcctaaaccctcaatccaaacacaccct 54320435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 41174388 - 41174354
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||||||||||||||||    
T  41174388 tcccctcctaaaccctcaatccaaacacaccctaa 41174354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 27775617 - 27775580
Alignment:
Q  333 cttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27775617 cttcccctcctaaaccctcaatccaaacaaaccctaag 27775580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 34110840 - 34110803
Alignment:
Q  325 tcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  34110840 tcccctctcttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 45742065 - 45742134
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | | |||||||||||| ||| ||||||||||  |||||||||||||||    
T  45742065 cgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacaccct 45742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 4437492 - 4437428
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||| |||| | || | ||||||||||| || |||||||||||| ||||||||||||    
T  4437492 taatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 31348390 - 31348314
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctc-----ctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| | |||| |||||||||||||||     |||||||||| |||||||||||||||||    
T  31348390 cgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccctaa 31348314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 47694403 - 47694347
Alignment:
Q  313 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| |||||||||||||||||| |||| ||| |||| ||||||||| |||||||    
T  47694403 aaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccctaa 47694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 5730875 - 5730828
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||| || ||| ||||||||||||||| |||||||||||||||||    
T  5730875 ccctcccatctctttccctcctaaaccctccatccaaacacaccctaa 5730828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 4437626 - 4437660
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| ||||||||||||||||||||    
T  4437626 tcccctcctaaaccttcaatccaaacacaccctaa 4437660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 7977578 - 7977520
Alignment:
Q  285 attttacattgttcgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcc 342  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||||||||| ||||||    
T  7977578 attttataatgttcgtaatttaaaaaaagaaaagtaagccctcccctccctttccctcc 7977520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 35543333 - 35543411
Alignment:
Q  154 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 232  Q
    ||||||||| || |||||  ||||  || ||||||||| |||   |||||||||||| |||||||||||||||||||||    
T  35543333 gagggtttaagaagggagaacttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 56135933 - 56135967
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||| |||||||||||||||||    
T  56135933 tcccctcctaaaccctccatccaaacacaccctaa 56135967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 23332709 - 23332786
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtgttt 377  Q
    |||||||||||| ||||||||| | | | ||| |||||||||  |||| ||||||||||||||| |||| | ||||||    
T  23332709 taatttaaaaaagaaaagtgagtcattcactctcttcccctcacaaactctcaatccaaacacatcctaggcgtgttt 23332786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 24565415 - 24565346
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | ||||||||   |||||| ||||||||| || |||||||||||||||    
T  24565415 cgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacaccct 24565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 1968405 - 1968349
Alignment:
Q  313 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| | |||||||||||||| |||||  ||||||| ||||||||| ||||||||    
T  1968405 aaaagtaaaccctcccctccctttccctctcaaacccttaatccaaacgcaccctaa 1968349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 5825072 - 5825140
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||| |||||| |||||| |  |||| || | ||||| ||||||||||||| |||||||||||||||    
T  5825072 gtaattcaaaaaagaaaagtaaatcctctccccacttcctctcctaaaccctccatccaaacacaccct 5825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 11842325 - 11842401
Alignment:
Q  144 tgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaa 220  Q
    |||||||  ||||||||||| |||||||| ||||| || |||||| || ||| ||||| ||||||||  ||||||||    
T  11842325 tgtttggatagagggtttagaaggggaggacttacttttctttttcaaattacagacactataaaatattttttaaa 11842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Complemental strand, 22921011 - 22920979
Alignment:
Q  337 ccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| ||||||||||||||||||||    
T  22921011 ccctcctaaaccatcaatccaaacacaccctaa 22920979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 22970788 - 22970820
Alignment:
Q  337 ccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| ||||||||||||||||||||    
T  22970788 ccctcctaaaccatcaatccaaacacaccctaa 22970820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 32192891 - 32192847
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcc 327  Q
    |||||||||||| ||  ||||||||||||||||||||| ||||||    
T  32192891 acattttacattattgataatttaaaaaataaaagtgaaccctcc 32192847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 351
Target Start/End: Original strand, 49735667 - 49735695
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctc 351  Q
    |||||||||||||||||||||||||||||    
T  49735667 cctcccctcccttcccctcctaaaccctc 49735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 12022178 - 12022387
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||||| || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  12022178 ggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 12022277  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12022278 aaaacacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatcca 12022377  T
Q  358 aacacaccct 367  Q
    ||||||||||    
T  12022378 aacacaccct 12022387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 135 - 332
Target Start/End: Complemental strand, 39449546 - 39449339
Alignment:
Q  135 ttaagggtgtgtttgggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaat 229  Q
    |||||||||||||||||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39449546 ttaagggtgtgtttgggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaat 39449447  T
Q  230 taacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 324  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  39449446 taacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagctc 39449347  T
Q  325 tcccctcc 332  Q
    ||| ||||    
T  39449346 tcctctcc 39449339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 174 - 367
Target Start/End: Original strand, 8815187 - 8815385
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt-a 272  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||| |||||||||| |||| |||||| |||||| || ||||||||||||||||||| |    
T  8815187 cttacttttcttttttaaattacggacattataaaatgatttttagaaaattgaatcaacaacatgataaatgattatataatacttcaaaaacacttta 8815286  T
Q  273 attta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||    |||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8815287 atttatttgaaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccct 8815385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 43732896 - 43732679
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  |||||||||||||||  ||||| ||||||||| ||||||||||    
T  43732896 ggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttca 43732797  T
Q  263 aaaacacttaattta-------------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccc 349  Q
    |||||||||||||||             |||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  43732796 aaaacacttaatttattttttttaaaaaaaaaaacattttacattgttagtaatttaaaaaataaaagtgagtcctcctctcccttcccctcctaaaccc 43732697  T
Q  350 tcaatccaaacacaccct 367  Q
    ||||||||||||||||||    
T  43732696 tcaatccaaacacaccct 43732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 30365339 - 30365128
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||| | || ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  30365339 ggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 30365240  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||| | ||||||  |||||||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  30365239 aaaacacttaatttattctaaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatcca 30365140  T
Q  358 aacacaccctaa 369  Q
    ||||||||||||    
T  30365139 aacacaccctaa 30365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 185 - 370
Target Start/End: Complemental strand, 16024341 - 16024150
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 278  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||      |    
T  16024341 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaa 16024242  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||  ||||||| |||||||||||||||||||  |||| ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  16024241 aaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcccctcccttcccttcctaaaccctcaatccaaacacaccataag 16024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 138 - 364
Target Start/End: Original strand, 20472702 - 20472933
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 237  Q
    |||||||||||||  |||||| ||| ||||| ||||||||| || ||||||||| ||| |||||||||||||| | ||||| |||||||||||||||  |    
T  20472702 agggtgtgtttggatagagggattaagagggaagggcttacttttcttttttaaattacagacattataaaataaattttagaaaattgaattaacaata 20472801  T
Q  238 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    ||||  |||||||| ||||||||||||||||||| |||||     |||| |||  |||||||||||||||||||||||||||||||||| ||| || |||    
T  20472802 tgatatatgatcatataatacttcaaaaacacttgatttatttttaaaaaacaacttacattgttcgtaatttaaaaaataaaagtgagtccttccttcc 20472901  T
Q  333 cttcccctcctaaaccctcaatccaaacacac 364  Q
    ||| |||| ||||||| |||||||||||||||    
T  20472902 ctttcccttctaaaccttcaatccaaacacac 20472933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 159 - 367
Target Start/End: Complemental strand, 9933454 - 9933240
Alignment:
Q  159 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 258  Q
    ||||||||||||||| |||| || |||||||||  |   ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||     
T  9933454 tttaggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatgataaatgatcatataatat 9933355  T
Q  259 ttcaaaaacacttaattt------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 352  Q
    |||||||| |||||||||      ||||| | ||||||||||||||||||||||||| ||||||||||   || |||||| ||| ||||||||||| |||    
T  9933354 ttcaaaaatacttaatttattttgaaaaaaatattttacattgttcgtaatttaaaatataaaagtgaattcttccctcctttctcctcctaaaccttca 9933255  T
Q  353 atccaaacacaccct 367  Q
    |||||||||||||||    
T  9933254 atccaaacacaccct 9933240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 43826500 - 43826333
Alignment:
Q  204 ataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttc 298  Q
    ||||||| ||||||| ||||||||||||||| |||||| |||||||||  |||||||||||||||||||| |||     |||| ||||||||||||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttc 43826401  T
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    |||||||| ||||||||| ||| | ||||||||| ||||||||||||| |||||||| ||||||||||    
T  43826400 gtaatttacaaaataaaaatgaactctcccctccattcccctcctaaatcctcaatctaaacacaccc 43826333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 166 - 359
Target Start/End: Complemental strand, 34196514 - 34196316
Alignment:
Q  166 ggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaa 265  Q
    ||||||||||||| || |||||| |||| | |||||||||||||||||||||| ||||||||||||||| || ||| || |||||| |||||||||||||    
T  34196514 ggggagggcttacttttctttttaaatt-acagacattataaaatgatttttagaaaattgaattaacaacaagataaacgatcatataatacttcaaaa 34196416  T
Q  266 acactta---attt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaa 358  Q
    |||||||   ||||    ||||| ||| || ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||||    
T  34196415 acacttatttatttaaaaaaaaaaacacttcacattgttcgtaatttaaaaaattaaagtga-cccccccctcccttcccctcctgatccctcaatccaa 34196317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 8671849 - 8672040
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg--atcaatgatcatgtaatacttcaaaaacacttaa-----ttta 277  Q
    ||||||| |||  ||||||||||||||||||||| |||||||||||||||  |||  |  ||||||||| |||||||||||||| ||||||     ||||    
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttta 8671948  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| |||||||||||| || |||||||||||||||||| | || | |||||| ||||||||| ||||| ||||||||||||||||||||||    
T  8671949 aaaatacattttacattatttgtaatttaaaaaataaaattaagtcatcccctaccttccccttctaaatcctcaatccaaacacaccctaa 8672040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 9434377 - 9434543
Alignment:
Q  206 aaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttcg 299  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| || ||||||||||||| ||||||||||      ||||| ||||||||||||||||     
T  9434377 aaaataatttttaaaaaattgaattaacaacatgataaatgataatataatacttcaaaaccacttaatttattaaaaaaaaaacattttacattgttcc 9434476  T
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||| | || || ||  || ||||| |||||||||||||||||||||||||    
T  9434477 taatttaaaaaataaaagtgaactcttccatctatt-ccctcgtaaaccctcaatccaaacacaccct 9434543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 198 - 367
Target Start/End: Original strand, 40633059 - 40633232
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 292  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||| ||||||  | ||||| |||||||||||||||||||     |||  |||||||||     
T  40633059 gacattataaaataatttttagaaaattgaattaacaacatgataaatgattgtataatatttcaaaaacacttaatttattttaaaacaacattttacg 40633158  T
Q  293 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||| ||||| ||||| ||| || ||| || ||||||| ||| ||||||||||||||||||||||||    
T  40633159 ttgttcgtaattgaaaaattaaaattgaacc-tccgcttccttcccttccgaaaccctcaatccaaacacaccct 40633232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 200 - 364
Target Start/End: Complemental strand, 6453356 - 6453185
Alignment:
Q  200 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa------tttaaaaagacattttacat 293  Q
    ||||||||||||||||||| ||||||||||||| | |||||| | | ||||| |||||||||||||||||||||      || ||||| | |||||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatgataagtaatcatataatacttcaaaaacacttaatatattttaaaaaaaatattttacat 6453257  T
Q  294 tgttcgtaattt-aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    | |||||||||| |||||||||||||||| | |||||||||||   |||| |||||||||||||||| ||||    
T  6453256 tattcgtaatttaaaaaaataaaagtgagtcttcccctccctttttctcccaaaccctcaatccaaatacac 6453185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 7394615 - 7394701
Alignment:
Q  277 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||| || |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  7394615 aaaaaaacgttttgcattgttcgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 43732848 - 43732933
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||| | ||| |||||||||||||| |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  43732848 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 43732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 12022226 - 12022136
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcct-aaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||| || |||||||| |||| ||||||||||||||||    
T  12022226 cattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccctaagagt 12022136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 371
Target Start/End: Complemental strand, 29937676 - 29937508
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacattttacattgtt 297  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||   || |   || |||| ||| |||||| ||||||||    
T  29937676 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt---aatc---tattttagaaaaacatttgacattgtt 29937583  T
Q  298 cgt-aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    | | |||||||||||||||| ||| | |||| |   ||| || || |||||||||||| ||||||||||||||||    
T  29937582 cataaatttaaaaaataaaaatgatctctcctccatctttccatcttaaaccctcaattcaaacacaccctaaga 29937508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 31543249 - 31543318
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaa 31543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 1027023 - 1027092
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||    
T  1027023 cgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccct 1027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 8815224 - 8815135
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||| | ||| |||||||||||||| |||||| || | || |||| ||||||||||||||||||| |||||||||||||||||||||    
T  8815224 cattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccctaagagt 8815135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 2248521 - 2248450
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||  ||| ||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  2248521 cgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccctaa 2248450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 9718651 - 9718723
Alignment:
Q  295 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| |||||||||||| |||||| | |  |||||||||||| ||||||||||||||||||||||||||||||    
T  9718651 gttcataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 1281212 - 1281149
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||||||||||||| |||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  1281212 cgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 36308994 - 36309081
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||||||| | |||| ||| ||| ||||||||||| |  |||||| | |||||||||||||||||||||||||||||| |||||||||    
T  36308994 tttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 7503131 - 7503205
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtg 374  Q
    |||||||||||  |||||| | |||||||||||| |||||||| ||| |||||||||||||||||||||| ||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaaagtg 7503205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 31543141 - 31543072
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | |||||||||||||||||||| ||||||||| ||||||||| |||||    
T  31543141 cgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacataccct 31543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 34196492 - 34196556
Alignment:
Q  307 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  34196492 aaaaagaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccctaagag 34196556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 40633051 - 40632994
Alignment:
Q  312 taaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  40633051 taaaagtaagccctcctctcccttcccctcctaaaccctccattcaaacacaccctaa 40632994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 30365306 - 30365374
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||| |||||  |||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  30365306 gtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccct 30365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 7979209 - 7979138
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | | |||| ||||||||| || |||||||||||||||||||||| |||||    
T  7979209 cgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacacatcctaa 7979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 2481977 - 2482022
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2481977 ccctcccttcccctcctaaaccctccatccaaacataccctaagag 2482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 13405041 - 13404976
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||| |||||| |   ||||| ||||||||||||||||||||||||||||| ||||||||    
T  13405041 atttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacaccct 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 30581988 - 30582033
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcct 343  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  30581988 cgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 34634318 - 34634387
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||| ||| ||||| | |||||||||||||||||| ||| |||||||||||||||    
T  34634318 cgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacaccct 34634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 41103549 - 41103504
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  41103549 ccctcccctctcttcccctcctaaaccctccatccaaacacaccct 41103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 11033482 - 11033417
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||| |||||| | |||  ||||||||||| || ||||||||||||||||||||||||||||    
T  11033482 atttaaaaaagaaaagtaaaccc--ccctcccttcctcttctaaaccctcaatccaaacacaccctaa 11033417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||  |||||| | ||||||||||||||| | ||||||||||| ||||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 16024315 - 16024394
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||| | ||| |||||||||||||  |||||| | | ||||||||||||||||||||||| |||| ||||||||||||    
T  16024315 cattttataatgtccgtaatttaaaaag-aaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 31738585 - 31738669
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| | ||| |||||||||||||  |||  | | |||||||||  ||||||||||||||||||| |||||||||||||||||    
T  31738585 attttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccctaa 31738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 369
Target Start/End: Complemental strand, 3726900 - 3726861
Alignment:
Q  330 tcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacaccctaa 3726861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 367
Target Start/End: Original strand, 4247725 - 4247764
Alignment:
Q  328 cctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 24243118 - 24243287
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttaca 292  Q
    |||| |||||||||  ||||||||| ||||| ||| | |||||| ||||||||| |||||||||||  ||||||||     || ||||| | || | | |    
T  24243118 gacactataaaatgtcttttaaaaa-ttgaaataataacatgataaatgatcatataatacttcaatcacacttaattaatttgaaaaaaagatctcata 24243216  T
Q  293 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||  |||||||| ||||  ||||| ||||||||||||| |||||| | ||||||||| ||||||||||||    
T  24243217 ttgtctgtaatttagaaaaggaaagtaagccctcccctccattcccc-cttaaaccctcgatccaaacacac 24243287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 371
Target Start/End: Complemental strand, 33922563 - 33922521
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  33922563 ctcccttcccttcctaaaccctcaatccaaacataccctaaga 33922521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 11785725 - 11785774
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||| || ||| ||||||||||||||| |||||||||||||||||||    
T  11785725 ccctcccttctcttaccctcctaaaccctccatccaaacacaccctaaga 11785774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 28083781 - 28083744
Alignment:
Q  328 cctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28083781 cctcccttcccctcctaaaccctcaatccgaacacacc 28083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 30479806 - 30479721
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||| | | |||  ||||||||||||  |||||||| | ||||||||| | ||||||||||| |||| |||||||||||    
T  30479806 aaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 2413027 - 2412961
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||||| || ||| ||||||||||     ||||||||||||||||| |||||||||||| |||||    
T  2413027 gtaatttaaaaaagaatagtaagccctcccc-----tcccctcctaaaccctccatccaaacacactctaag 2412961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 367
Target Start/End: Complemental strand, 6315101 - 6315066
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6315101 ccttcgcctcctaaaccctcaatccaaacacaccct 6315066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 10028298 - 10028369
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||   |||||| | |||||||||| ||||| |||||||||||||  |||||||||| |||||    
T  10028298 cgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaaccctctgtccaaacacatcctaa 10028369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 10028179 - 10028105
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||||||||||||| |||||| |   ||| |||||  ||||||||||||||||| ||||||||||| ||| ||||    
T  10028179 cgtaatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaaccctcgatccaaacacatccttagag 10028105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 30479897 - 30479959
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||| |||| | | |||||| |||| |||| ||| |||||||||||||||||||||||    
T  30479897 tttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaacacacc 30479959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 369
Target Start/End: Original strand, 37032596 - 37032626
Alignment:
Q  339 ctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||||||||||||    
T  37032596 ctcctaaaccctcaatccaaacacaccctaa 37032626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 36308884 - 36308847
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  36308884 tcccctcccaaacccttaatccaaacacaccctaagag 36308847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 38198135 - 38198196
Alignment:
Q  214 ttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 275  Q
    |||| |||||||||| ||||| ||||||  |||||||| |||||||||||  ||||||||||    
T  38198135 tttttaaaaattgaaataacaacatgatatatgatcatataatacttcaatcacacttaatt 38198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 40990359 - 40990427
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| ||||   | | ||| |||||||||| ||||||| |||||||||||||||||||||    
T  40990359 cgtaatttaaaaaagaaaaacaaactctctcctcccttcctctcctaa-ccctcaatccaaacacaccct 40990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 7502996 - 7502964
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||||||||||||||||||||||||    
T  7502996 tcccctcccaaaccctcaatccaaacacaccct 7502964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 9718521 - 9718489
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||| |||||||||||||||    
T  9718521 tcccctcctaaaccctccatccaaacacaccct 9718489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 16652994 - 16652958
Alignment:
Q  331 cccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  16652994 ccctccccctccaaaaccctcaatccaaacacaccct 16652958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 27487131 - 27487087
Alignment:
Q  231 aacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 275  Q
    |||| |||||| ||||||||| ||||||||||| |||||||||||    
T  27487131 aacaacatgataaatgatcatataatacttcaataacacttaatt 27487087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 5e-72; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 10204785 - 10204576
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||| ||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||| | | || ||||||||| ||||||||||    
T  10204785 ggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaattgaattaacaacgtaataaatgatcatataatacttca 10204686  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10204685 aaaacacttaatttattttaaaaagacattttacattgttggtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatcca 10204586  T
Q  358 aacacaccct 367  Q
    ||||||||||    
T  10204585 aacacaccct 10204576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 15986659 - 15986868
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||| ||||  || ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||    ||||||||| |||||||| |    
T  15986659 ggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaattgaattaacaacatttaaaatgatcatataatacttta 15986758  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  15986759 aaaacacttaatttattttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatcca 15986858  T
Q  358 aacacaccct 367  Q
    ||||||||||    
T  15986859 aacacaccct 15986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 138 - 367
Target Start/End: Original strand, 40305670 - 40305909
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggagggga-----gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 232  Q
    |||||||||||||   |||||||||||||||||     |||||||  || ||||||||| ||| |||||||||||||| ||||||| |||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggagggcttagttttcttttttaaattacagacattataaaataatttttagaaaattgaattaa 40305769  T
Q  233 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 327  Q
    ||  ||||| ||||||||| || |||||||||||| |||||||||     |||| ||||||||||||| |||||||||||||||||||| ||||  ||||    
T  40305770 caatatgataaatgatcatatagtacttcaaaaacccttaatttattttgaaaaaacattttacattggtcgtaatttaaaaaataaaaatgagttctcc 40305869  T
Q  328 cctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  40305870 cctcccttctcctcctaaaccctcaatccaaacacaccct 40305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 138 - 365
Target Start/End: Original strand, 8551427 - 8551660
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 236  Q
    |||||||||||||  ||||||||||  |||| | ||| |||||||  ||| ||||  || ||||||||||||||||||||||||||||| |||||||| |    
T  8551427 agggtgtgtttggatagagggtttaatagggaaagggtttacatttatttcttaaactacagacattataaaatgatttttaaaaaattaaattaacaac 8551526  T
Q  237 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 331  Q
    || || ||||||||| |||||||| ||||||||||||||||     |||| ||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  8551527 attataaatgatcatataatactttaaaaacacttaatttatttttaaaacacattttacattgctcgtaatttaaaaaataaaagtgagaccccccctc 8551626  T
Q  332 ccttcccctcctaaaccctcaatccaaacacacc 365  Q
     |||||||||||||||| ||||||||||||||||    
T  8551627 tcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 33744228 - 33744437
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| || | |||||    
T  33744228 ggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatatatttcttca 33744327  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  33744328 aaaacacttaatttattttaaaaaaacattttgaattgttcgtaatttaaaatataaaagtgagccctcccctcccttcatctcctaaaccctcaatcca 33744427  T
Q  358 aacacaccct 367  Q
    || |||||||    
T  33744428 aatacaccct 33744437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 163 - 365
Target Start/End: Complemental strand, 34981019 - 34980812
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||| ||||| || ||||||||| |||  |||||||||||||||||| || |||||||| |||||| |||||| |||||| || ||||||||||    
T  34981019 ggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaattgagttaacaacatgataaatgattatataatacttca 34980920  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||| | ||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||||    
T  34980919 aaaacacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatcca 34980820  T
Q  358 aacacacc 365  Q
    ||||||||    
T  34980819 aacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 10043461 - 10043252
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||| || || || ||||||||| |||   | |||||||||||||||||| ||||||||||||||| ||| || ||| ||||| ||||||||||    
T  10043461 ggaggggaggactcacttttcttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacattataaataatcatataatacttca 10043362  T
Q  263 aaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    ||||||||||||||     ||||  | ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| |    
T  10043361 aaaacacttaatttcttttaaaacaatattttacattgttcgtaatttaaaaaataaaagtgagtcatcccctcccttcccctcataaaccatcaatcta 10043262  T
Q  358 aacacaccct 367  Q
    || |||||||    
T  10043261 aatacaccct 10043252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 21581135 - 21580945
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 278  Q
    |||||||| |||  ||| |||| |||| ||||||| ||||||||||||||| |||||| |||| |||| | |||||||||||||||||||||||     |    
T  21581135 ttttttaaattatggacgttatgaaataatttttagaaaattgaattaacaacatgataaatgttcatatgatacttcaaaaacacttaatttattttaa 21581036  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||| |||||| ||||||||| |||||||||    
T  21581035 aaaaatattttacattgttcgtaatttagaaaataaaagtgacccctcccctccctttctctccaaaacccccaatccaaatacaccctaa 21580945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 332
Target Start/End: Complemental strand, 5688572 - 5688448
Alignment:
Q  213 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaa 307  Q
    |||||| ||||||||||||||| ||||||  ||||| || ||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||    
T  5688572 tttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaa 5688473  T
Q  308 aaaataaaagtgagccctcccctcc 332  Q
    ||||||||||||| |||||||||||    
T  5688472 aaaataaaagtgaaccctcccctcc 5688448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 372
Target Start/End: Complemental strand, 14245177 - 14245083
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||| |||||| ||| ||| |||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14245177 aaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14245083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 13634882 - 13634954
Alignment:
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    |||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  13634882 tgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 7544205 - 7544136
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7544205 cgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccct 7544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 13634776 - 13634711
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 13634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 14245206 - 14245295
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||||| ||| ||| |||||||||||||  ||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14245206 acatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 14245295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 365
Target Start/End: Original strand, 1657968 - 1658055
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||| |||||||| | ||| |||||||||||||  |||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  1657968 aaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 6382525 - 6382422
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 273  Q
    ||||| || ||||| |||||||  |||||||||||||  |||||| ||||||||||||||| |||||| |||| |||||| |||||||||||| ||||||    
T  6382525 cttacttttcttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatgataaatgttcatgtgatacttcaaaaagacttaa 6382426  T
Q  274 ttta 277  Q
    ||||    
T  6382425 ttta 6382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 367
Target Start/End: Complemental strand, 11437108 - 11436939
Alignment:
Q  203 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacat------tttacattgt 296  Q
    ||||||||| ||||||||||||| || |||||||  ||| ||||||| | |||||||||||  ||  || ||||||||| | ||      | || |||||    
T  11437108 tataaaatgttttttaaaaaattaaaataacagcgcgataaatgatcgtataatacttcaatcac-gtttatttaaaaataaataaaatatatatattgt 11437010  T
Q  297 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
     ||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  11437009 ccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgccct 11436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 15858902 - 15858988
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||| |||||||||||||||| |||||||| ||||| | |||||||||||| ||||| ||| ||||||| ||||||||||||||||    
T  15858902 attttccattgttcgtaatttagaaaataaatgtgagtcatcccctcccttcacctcccaaagcctcaattcaaacacaccctaaga 15858988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 26414962 - 26414893
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  26414962 cgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccct 26414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 10476202 - 10476274
Alignment:
Q  297 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| || |||| | | |||||||||||||||||||||||||||| |||||||||||||||||    
T  10476202 tcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccctaa 10476274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  304 ttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 14684638 - 14684729
Alignment:
Q  277 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccta 368  Q
    ||||| |||||||| ||||  ||||||| |||||| |||||| |||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  14684638 aaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacacccta 14684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 16938524 - 16938477
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16938524 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 16938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 372
Target Start/End: Complemental strand, 15986713 - 15986619
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||| ||||||| | |||  |||| |||||||| |||| | || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15986713 aaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacaccctaagag 15986619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 5688590 - 5688639
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccctaagag 5688639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 36363187 - 36363271
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||||||| | | | |||||||||||||  |||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  36363187 aaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 325
Target Start/End: Original strand, 6597845 - 6597984
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 278  Q
    ||||||||| |||  |||||| |||||||||||||  ||||||||| ||||| |||||| ||||||||| ||||||       ||||||||||||    |    
T  6597845 cttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatgataaatgatcatataatac-------acacttaatttatttta 6597937  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccct 325  Q
    ||| | |||||||||| ||| ||||||||||||||||| ||||||||    
T  6597938 aaaaatattttacattattcataatttaaaaaataaaaatgagccct 6597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 10204752 - 10204823
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||| |||||||| |||||| || ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  10204752 gtaaattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacaccctaag 10204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 34980987 - 34981058
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||| |||||| || ||||||||||||||||||| ||||||||| ||  |||||||||||||||    
T  34980987 taatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccctaaga 34981058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 10043055 - 10043156
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 273  Q
    ||||| || |||| |||| ||| | |||||| | ||| |||| || ||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  10043055 cttacttttctttcttaaattataaacattaaagaattatttctagaaaattgaattaacaacatgataaatgatcatataatactttaaaaacacttaa 10043154  T
Q  274 tt 275  Q
    ||    
T  10043155 tt 10043156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 33744260 - 33744191
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| |||||| | ||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaa 33744191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 10043425 - 10043489
Alignment:
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 360  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||||  |||||||||||    
T  10043425 ttcgtaatttaaaaaagaaaagtgagtcctcccctcccttttcctcctaaacaatcaatccaaac 10043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 10476090 - 10476026
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||| |||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacaccct 10476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 20147074 - 20147114
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccct 20147114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 40305710 - 40305667
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccctaag 40305667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 369
Target Start/End: Original strand, 4373674 - 4373812
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| ||||||||| ||||| |||||  ||||||||||||     |||| || | ||| || || |||||||||||||| |||||| |  ||||| ||    
T  4373674 catgataaatgatcatataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctccact 4373773  T
Q  331 cccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
       ||||| ||||||||||||||||||||||||||||||    
T  4373774 attttcccttcctaaaccctcaatccaaacacaccctaa 4373812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 11756949 - 11756876
Alignment:
Q  295 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||   | | ||||| ||||| |||||||||||||||||||||||||||| |||||    
T  11756949 gttcgtaatttaaaaaataaaaacaaactctcccatccct-cccctcctaaaccctcaatccaaacacatcctaa 11756876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 12036018 - 12035936
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||| | ||||| |||||||||||| ||||   || ||||| |||||||||||||||||||| || |||||||||||||||    
T  12036018 attttataatgttcataatttaaaaaagaaaaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacaccct 12035936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 12036007 - 12036084
Alignment:
Q  199 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 277  Q
    |||||||||||| ||| ||| |||||||||||| || |||||| ||| ||||| |||||||| ||||||||||||||||    
T  12036007 acattataaaattattattagaaaattgaatta-caacatgataaattatcatataatacttaaaaaacacttaattta 12036084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 369
Target Start/End: Original strand, 11437094 - 11437188
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc---ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| |||||||| | ||||| || ||||||||| |||||| || |   ||||| ||||||||||| |||||||||||||||||| |||||||||    
T  11437094 aaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtcgtcctcccttcccttccccttctaaaccctcaatccaaaaacaccctaa 11437188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 16501966 - 16502034
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccct-cccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||||||||||| |   || |||||| ||| |||||||||||||||||||||||||||||    
T  16501966 cgtaatttaaaaaataaaagtaatttctccccctctctttccctcctaaaccctcaatccaaacacacc 16502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 374
Target Start/End: Original strand, 28279533 - 28279728
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 278  Q
    ||||||| |||  |||||||| ||||| |||||||||| || |  ||  | |||||| ||||||||| |||||||||||  ||||||| ||||      |    
T  28279533 tttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttattttaga 28279632  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtg 374  Q
    ||| |||| ||| ||  | | |||||||||||  |||||| | ||||| |||||||||||||  || || ||||||||||||||||||| ||||||    
T  28279633 aaaaacatgttatatattccataatttaaaaaggaaaagtaaaccctctcctcccttccccttatagactctcaatccaaacacacccttagagtg 28279728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 40815365 - 40815297
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||| |||||| |  |||| | ||||||||||||||||| | ||||||||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacaccct 40815297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 42681509 - 42681445
Alignment:
Q  306 aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||| |||||| |  |||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  42681509 aaaaaaaaaaagtaaatcctcccctcctttcccctcttaaaccctcaatccaaacacaccttaag 42681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 365
Target Start/End: Original strand, 7544335 - 7544378
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  7544335 ccctccccttccttcccctcctaaaccctccatccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 11757102 - 11757144
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  11757102 ccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  326 cccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 22022891 - 22022849
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  22022891 cctctcctccattcccctcctaaaccctcaatccaaacacacc 22022849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 8502904 - 8502835
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||||| ||||||| ||| ||||| || |||||| || |||||||||||||||    
T  8502904 cgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacaccct 8502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 8503038 - 8503079
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  8503038 ccttcctctcataaaccctcaatccaaacacaccctaagagt 8503079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 12036105 - 12036177
Alignment:
Q  290 acattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||||||||||||||||||| |||||||| | | ||||||||  |||| |||||||| ||||||| ||||||||    
T  12036105 acattgttcgtaatttaaaa-ataaaagtaaactctcccctcatttcctctcctaaatcctcaatacaaacaca 12036177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 16938678 - 16938723
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  16938678 ccctcccctccattcctctcctaaaccctccatccaaacacaccct 16938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 6382393 - 6382357
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgag 321  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6382393 attttacattgttcgtgatttaaaaaataaaagtgag 6382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 9856922 - 9856890
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||||||    
T  9856922 tcccctcctaaaccctcaatccaaacacaccct 9856890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 22023571 - 22023607
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22023571 tcccctcctaaaccctccatccaaacacaccctaaga 22023607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 10650589 - 10650660
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| | |  || ||||||||||||||| ||||  ||||||||||||||||||||    
T  10650589 cgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttcaatccaaacacaccctaa 10650660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 37551585 - 37551652
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||  |||||| | || ||| ||||||| ||||| ||||||||| ||||||||||||||||||    
T  37551585 tttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaag 37551652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 37654415 - 37654482
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||  |||||| | || ||| ||||||| ||||| ||||||||| ||||||||||||||||||    
T  37654415 tttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccctaag 37654482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 2183974 - 2184060
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||| | ||| ||||||||||| |  |||| | |||||||  ||  ||||||||| ||||||||| |||||||||||||||||    
T  2183974 acattttataatgtccgtaatttaaagaggaaaaataagccctcttctatcttcccctcttaaaccctccatccaaacacaccctaa 2184060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 36363075 - 36363037
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  36363075 ctcccctccattccccttctaaaccctcaatccaaacac 36363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 36392359 - 36392393
Alignment:
Q  333 cttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||| ||||    
T  36392359 cttcccctcctaaaccctcaatccaaacacgccct 36392393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 20513612 - 20513681
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||||| |  ||| || ||  ||| | ||||||||||||||||||||||||||||    
T  20513612 cgtaatttaaaaaagaaaagtaaatccttccttcttttcgcttcctaaaccctcaatccaaacacaccct 20513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 37607100 - 37607141
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||    
T  37607100 ctccctttccctcgtaaaccctccatccaaacacaccctaag 37607141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 37779309 - 37779350
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||    
T  37779309 ctccctttccctcgtaaaccctccatccaaacacaccctaag 37779350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||| |||||||||||||||| | |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 13298477 - 13298509
Alignment:
Q  338 cctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||| ||||||||||||||||||    
T  13298477 cctcctaaaccctctatccaaacacaccctaag 13298509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 33519257 - 33519048
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| |||| || ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  33519257 ggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 33519158  T
Q  263 aaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    ||||||||||||||     ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33519157 aaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatcca 33519058  T
Q  358 aacacaccct 367  Q
    ||||| ||||    
T  33519057 aacactccct 33519048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 198 - 373
Target Start/End: Complemental strand, 37926015 - 37925835
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttaca 292  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||  ||||| || |||||||||||||||||||||     || ||||| ||||||||||    
T  37926015 gacattataaaatgatgtttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctatttaaaaaaaacattttaca 37925916  T
Q  293 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37925915 ttgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagagt 37925835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 36267588 - 36267797
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||||  || ||||||||| |||  || |||||||||||||||||| |||||||||| ||||  ||||| ||||||||| ||||||||||    
T  36267588 ggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaattgaatcaacaatatgataaatgatcatataatacttca 36267687  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||| | ||     |||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36267688 aaaacacttactatattttgaaaaaacattttacattggttgtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatcca 36267787  T
Q  358 aacacaccct 367  Q
    ||||||||||    
T  36267788 aacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 154 - 369
Target Start/End: Complemental strand, 39646687 - 39646467
Alignment:
Q  154 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 253  Q
    ||||||||||||||||| | || || ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||||  ||||| || |    
T  39646687 gagggtttaggaggggatgactcacttttattttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgattgatgatgatat 39646588  T
Q  254 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 348  Q
    ||||||||||||||| ||||||||     |||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  39646587 aatacttcaaaaacagttaatttattttaaaaatatattttacattgttcataatttaaaaaataaaagtgattcctcccctcccttcctctcctaaacc 39646488  T
Q  349 ctcaatccaaacacaccctaa 369  Q
     ||||||||||||||||||||    
T  39646487 gtcaatccaaacacaccctaa 39646467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 28074158 - 28074354
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||         
T  28074158 cttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacctgataaatgatcatataatacttcaaaaacacttaatttatttaa 28074257  T
Q  278 ---aaaagacattttacattgttcgtaatttaaa--aaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
       |||| |||||||||||||||||| ||| |||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  28074258 aacaaaaaacattttacattgttcgtgattaaaaataaataaaagtgatccctccccttccttcctctcctaaaccctcaatccaaacacaccctaa 28074354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 135 - 350
Target Start/End: Complemental strand, 48013740 - 48013520
Alignment:
Q  135 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 234  Q
    ||||||||||||||||   ||||| |||||||||||| |||||| || | ||||||| | | |||| ||||||||| ||||||| |||||||||||||||    
T  48013740 ttaagggtgtgtttggatggagggattaggaggggagagcttacttttcgtttttaaatcacagactttataaaataatttttagaaaattgaattaaca 48013641  T
Q  235 gcatgatcaatgatcatgt-aatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 328  Q
     |||||| ||||||||| | |||  |||||||||||||||     |||||||| ||||||||||||||||||||||| ||||||||||| || | |||||    
T  48013640 acatgataaatgatcatatgaatttttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt-aaaaataaaagcgaacgctccc 48013542  T
Q  329 ctcccttcccctcctaaaccct 350  Q
    ||||||||||||||||||||||    
T  48013541 ctcccttcccctcctaaaccct 48013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 370
Target Start/End: Complemental strand, 37620983 - 37620771
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| || | || ||||||||| |||  ||||||||||||||||||||  |||||||||||| || |||||| || ||| || ||||||||||    
T  37620983 ggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatcaacatgataaaagattatataatacttca 37620884  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||| ||||||||     ||||  ||||||||||||||| |||||| ||||  |||||||| | ||||||||||||||||||| ||||||||||||||    
T  37620883 aaaacatttaatttattttaaaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctcccaaaccctcaatcca 37620784  T
Q  358 aacacaccctaag 370  Q
    |||||||| ||||    
T  37620783 aacacaccttaag 37620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 364
Target Start/End: Complemental strand, 35422168 - 35421967
Alignment:
Q  168 ggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaac 267  Q
    |||||| |||| || |||||| || |||  ||||||||||||| ||||||| ||||||||||||||| ||| || ||| ||||| | |||||||||||||    
T  35422168 ggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacataataaataatcatatgatacttcaaaaac 35422069  T
Q  268 acttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||     |||||||| ||||||||||||||| |||||||||||||||||| | || | ||  |||||||| |||| |||| |||||||||||||||    
T  35422068 acttaatttattttaaaaaaacattttacattgtttgtaatttaaaaaataaaaataagtcatcttctcccttcacctcttaaatcctcaatccaaacac 35421969  T
Q  363 ac 364  Q
    ||    
T  35421968 ac 35421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 158 - 364
Target Start/End: Complemental strand, 21857560 - 21857350
Alignment:
Q  158 gtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaata 257  Q
    |||||||||| |||| ||||| || || ||||||||   | |||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||    
T  21857560 gtttaggaggagaggacttacttttctcttttaattacga-acattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatacaata 21857462  T
Q  258 cttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 352  Q
     |||||||||||||||     ||||||||   |||||| ||||||| ||||||||||||||||| ||| | |||  |||||||||||| ||||||| ||     
T  21857461 tttcaaaaacacttaatttattttaaaaaaggattttatattgttcttaatttaaaaaataaaaatgaactctctactcccttccccttctaaaccttcg 21857362  T
Q  353 atccaaacacac 364  Q
    ||||||||||||    
T  21857361 atccaaacacac 21857350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 31364080 - 31364285
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||| |||||| || ||||| ||| |||  ||||||||||||||||||| | |||||||||| |||  ||| |   |||||||| ||||||||||    
T  31364080 ggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaacgacataa---atgatcatataatacttca 31364176  T
Q  263 aaaacac---ttaatttaaaaagacattttacattgttcgtaatttaaaaaata------aaagtgagccctcccctcccttcccctcctaaaccctcaa 353  Q
    |||||||   ||| |||||||| |||||||||||||||| ||||||||||||||      ||||| | ||||  ||||||||||||||||||||||||||    
T  31364177 aaaacacaacttattttaaaaaaacattttacattgttcctaatttaaaaaataaaaaataaagtaaaccct--cctcccttcccctcctaaaccctcaa 31364274  T
Q  354 tccaaacacac 364  Q
    |||||||||||    
T  31364275 tccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 163 - 367
Target Start/End: Original strand, 48881593 - 48881793
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||| ||||||| || ||||||||| |||  ||||||||||||| ||||| | ||||||||||||||| |||||| |||||| || |||| |||||    
T  48881593 ggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaattgaattaacaacatgataaatgattatataatgcttca 48881692  T
Q  263 aaaacacttaa------tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 356  Q
    |||| ||||||      |||||||| ||||||||| ||||| |||||||||||| |||||||||           |||||||||||||||||||||||||    
T  48881693 aaaatacttaatttatttttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtga----------accttcccctcctaaaccctcaatcc 48881782  T
Q  357 aaacacaccct 367  Q
    |||||||||||    
T  48881783 aaacacaccct 48881793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 12670928 - 12671079
Alignment:
Q  220 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataa 314  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |     |||| |||||| |||||||||||| ||||||||||||    
T  12670928 aaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattcatttacaaaaaacatttcacattgttcgtagtttaaaaaataa 12671027  T
Q  315 aagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    ||||||| | | |||||  || | |||||||| |||||||||||||||||||    
T  12671028 aagtgagtctttccctctgtttcactcctaaaacctcaatccaaacacaccc 12671079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 369
Target Start/End: Complemental strand, 8122328 - 8122142
Alignment:
Q  192 tttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaat----acttcaaaaacacttaattta-----aaaag 282  Q
    |||| |||||||||||||| ||||||| |||||||||||||||  ||||| ||| ||||| ||||    |||||||||||| ||||||||     |||      
T  8122328 tttatagacattataaaataatttttagaaaattgaattaacaagatgataaattatcatataattaatacttcaaaaacaattaatttattttaaaaca 8122229  T
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    | |||||| || ||||||||||||||||||||||||||| | |||||||||||| |||||||||  |||||| ||||||||||||||    
T  8122228 atattttatatggttcgtaatttaaaaaataaaagtgagtcttcccctcccttctcctcctaaattctcaattcaaacacaccctaa 8122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 366
Target Start/End: Original strand, 12682854 - 12682972
Alignment:
Q  253 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaac 347  Q
    |||||||||||||||||||||||||     |||| ||||||||||||||||||| ||||||||||||||||||||| | |||||  || | ||||||||     
T  12682854 taatacttcaaaaacacttaatttatttaaaaaatacattttacattgttcgtagtttaaaaaataaaagtgagcctttccctctgtttcgctcctaaaa 12682953  T
Q  348 cctcaatccaaacacaccc 366  Q
    |||||||||||||||||||    
T  12682954 cctcaatccaaacacaccc 12682972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 365
Target Start/End: Complemental strand, 16833867 - 16833684
Alignment:
Q  200 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt----------------aaaaaga 283  Q
    |||||||| || ||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||                ||||| |    
T  16833867 cattataatataatttttataaaattgaattaataacatgataaatgatcatgtaatacttcaaaaacacttaatttttttttaaaaaaaaaaaaaaaaa 16833768  T
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgag-ccct-cccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||||||||||||||||||||||||| || | || | | |||||| ||||| |||||||||||||||||||||||    
T  16833767 cattttacattgttcgtaatttaaaaaataaaagtaagtctctactcatccctttccctcttaaaccctcaatccaaacacacc 16833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 36267622 - 36267549
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36267622 cgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaga 36267549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 39856040 - 39856109
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  39856040 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 348
Target Start/End: Complemental strand, 48015394 - 48015229
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aa 278  Q
    ||||||| ||| |||| ||||||||| ||||||  ||||||||||||||| |||||| ||||||||| ||||  ||||||||||||||||||      ||    
T  48015394 tttttaaattacagactttataaaataatttttggaaaattgaattaacaacatgataaatgatcatataatttttcaaaaacacttaatttatttaaaa 48015295  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 348  Q
    ||| ||||||||||||    ||||||||||| ||||||| || | ||||||||||||||| || ||||||    
T  48015294 aaaaacattttacatt----gtaatttaaaagataaaagcgaacgctcccctcccttcccttcgtaaacc 48015229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 48881640 - 48881556
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| | ||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  48881640 attttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccctaa 48881556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 23116269 - 23116408
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaa-tgatttttaaaaaattgaattaacagc 236  Q
    |||||||||||||   |||||||||||| |||||||||||| || ||||||||| ||| ||||| ||||||| || || ||||||||||||| || || |    
T  23116269 agggtgtgtttggatggagggtttaggaagggagggcttacttttcttttttaaattacagacactataaaagtgtttattaaaaaattgaaatagcaac 23116368  T
Q  237 atgatcaatgatcatgtaatacttcaaaaacacttaattt 276  Q
    ||||| |||||| || |||||||||||  |||||||||||    
T  23116369 atgataaatgattatataatacttcaatcacacttaattt 23116408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 28074186 - 28074103
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| | ||| |||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  28074186 cattttataatgtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccct 28074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 3215934 - 3216048
Alignment:
Q  202 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgt 296  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||| ||| |||| |||||     |||| ||||||||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatgataaatgatcatataatacttcataaatacttgatttattttgaaaaaacattttacattgt 3216033  T
Q  297 tcgtaatttaaaaaa 311  Q
    || ||||||||||||    
T  3216034 tcataatttaaaaaa 3216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 33519224 - 33519295
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||| || |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33519224 gtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccctaag 33519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 369
Target Start/End: Complemental strand, 47390948 - 47390853
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| ||| |||| ||| || |||| |||||||||||| |||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  47390948 tttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaa 47390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 3143673 - 3143526
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa----cagcatgatcaatgatcatgtaatacttcaaaaacacttaa----- 273  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||    ||  ||||| ||||||||| |||||||||||||| ||||||         
T  3143673 cttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttat 3143574  T
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgag 321  Q
    |||| ||| | |||||||||||||  |||||||||||| |||| ||||    
T  3143573 tttataaaaatattttacattgtttataatttaaaaaaaaaaattgag 3143526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 372
Target Start/End: Original strand, 18795746 - 18795843
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    |||||||| |||||||| |||||||||||||||||||| ||||   |||| |||||| ||||||||| |||||| |||||||||||||||| |||||||    
T  18795746 tttaaaaaaacattttatattgttcgtaatttaaaaaagaaaatcaagccttcccct-ccttccccttctaaactctcaatccaaacacactctaagag 18795843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 1051670 - 1051742
Alignment:
Q  295 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||| |||| | |  |||| ||||||||||||||||||||||||||||||||||||||||    
T  1051670 gttcgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccct 1051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 366
Target Start/End: Original strand, 31571645 - 31571713
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    |||||||||||||| |||||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  31571645 cgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 41497032 - 41496949
Alignment:
Q  292 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtgt 375  Q
    ||||| |||||||||||||  |||||| |  | ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41497032 attgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccctaagggtgt 41496949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 369
Target Start/End: Original strand, 33655216 - 33655354
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  | |||||||||||| |||||| | ||||| |||    
T  33655216 catgataaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaaccctcgcct 33655315  T
Q  331 cccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    | |||||||||||||||||||||||||||||||| ||||    
T  33655316 ctcttcccctcctaaaccctcaatccaaacacactctaa 33655354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 367
Target Start/End: Original strand, 13771097 - 13771190
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| |||| ||| || || |||||||||||||  |||||| | | ||| |||||||||||||||||||||||||||| |||||||||||    
T  13771097 tttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccct 13771190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 4833599 - 4833531
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||  |||||| | |||||||||||||||||||||||||||||| ||||||||| |||||    
T  4833599 gtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccct 4833531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 13771030 - 13770946
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| | ||| |||||||||||||  | |||| |  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  13771030 attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaa 13770946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 30592292 - 30592388
Alignment:
Q  167 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 263  Q
    |||||||||||| || ||||||||| ||| ||||| |||||||||||||||||||||||||| |||    ||||| ||| ||||| |||||||||||    
T  30592292 gggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatcatatgataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 40282263 - 40282192
Alignment:
Q  301 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||||||| ||||   | |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccctaagag 40282192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 25887236 - 25887190
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacaccctaa 25887190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 40196616 - 40196530
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||| | ||| ||||||| |||||  |||||| | |||||| |||||||||||||| |||||||| |||||||||||||||||    
T  40196616 acattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccctaa 40196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 4835548 - 4835479
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||||| ||| | |||||||||| | ||||||||||||||||| |||||||||||    
T  4835548 cgtaatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccct 4835479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 18231757 - 18231830
Alignment:
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||||||||||||  |||||| |  ||||||||||||||||||||||||| ||| |||||||||||||||    
T  18231757 tgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 30592321 - 30592253
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||| |||||| ||||||||| |||||| |||||||||| |||| ||||||| |||||||    
T  30592321 gtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatccaaatacaccct 30592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 34228494 - 34228569
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||| ||||  |||||| |  |||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  34228494 cgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaagagt 34228569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 48147404 - 48147471
Alignment:
Q  287 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaat 354  Q
    |||||||| || |||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||    
T  48147404 tttacattatttgtaatttaaaaaataaaagtgagctctctcctctctttccctcctaaactctcaat 48147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 2087785 - 2087892
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaa----tgatcatgtaatacttcaaaaacac 269  Q
    ||||| || ||||||||| |||  || |||||||||| |||||||||||| |||||||||| |||||| ||    ||||||| ||||||||||||||||     
T  2087785 cttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatcatataatacttcaaaaacat 2087884  T
Q  270 ttaattta 277  Q
    | ||||||    
T  2087885 taaattta 2087892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 37926002 - 37926083
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||| | ||| ||||||||| |||| |||| |||| |||||||||||||||| ||||||| | ||||||| ||||||||    
T  37926002 cattttataatgtccgtaatttagaaaagaaaaatgagtcctcccctcccttcccttcctaaatcttcaatcctaacacacc 37926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 43230305 - 43230232
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||||| |||||| | ||||||||| |||| | ||| ||||||| |||||||||||||| ||||||    
T  43230305 cgtaatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaacccccaatccaaacacacactaaga 43230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 47391057 - 47391100
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  47391057 ctcccctcccttcccctcttaaaccctccatccaaacacaccct 47391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 31553243 - 31553183
Alignment:
Q  307 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| ||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  31553243 aaaattaaaagtga-ccctctcctcccttcccctcctaaa-cctccatccaaacacaccctaa 31553183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 42306505 - 42306571
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||  |||| | | || |||||||  |||||||||||||||||||||||||||||||    
T  42306505 cgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 17853106 - 17852966
Alignment:
Q  136 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 235  Q
    |||||||||||||||   ||||||||||||||||||||||||| || | ||||||| |||    || ||| ||| | ||||||||||  | || |||||     
T  17853106 taagggtgtgtttggatggagggtttaggaggggagggcttacttttcatttttaaattacgagcactatgaaaag-tttttaaaaagataaaataacaa 17853008  T
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattta 277  Q
    |||||| || |||||| |||||| ||||  ||||||||||||    
T  17853007 catgataaacgatcatataatacctcaatcacacttaattta 17852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 13425188 - 13425120
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||  |||| | | || ||| || |||||||||||||||||||| |||||||||||||||    
T  13425188 gtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacaccct 13425120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 23116418 - 23116470
Alignment:
Q  313 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||| || ||||||||||||||||||| |||||||||  ||||||||||||    
T  23116418 aaaagtaagtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 37417835 - 37417867
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacaccct 37417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 48015383 - 48015451
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||  |||||| ||| |||  ||||||||||||||||| ||||| ||||||||| |||||    
T  48015383 gtaatttaaaaacgaaaagtaagctctcatctcccttcccctcctaatccctccatccaaacaaaccct 48015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 17852913 - 17852870
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaagagtgttta 378  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  17852913 tcccctcctaaaccctcaatctaaacacaccctaaaagttttta 17852870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 25887366 - 25887436
Alignment:
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||  ||| || | | |||||||||||||||||||||||||||  | |||||||||||||    
T  25887366 ttcgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaacccttca-ccaaacacaccct 25887436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 26365836 - 26365765
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccc-tcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||| ||||||| |||||| | | |||  ||||||||||| ||||||||||||||||||||||||| ||||    
T  26365836 gtaatataaaaaagaaaagtaaactctcaactcccttccccctcctaaaccctcaatccaaacacactctaa 26365765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 41497065 - 41497172
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| ||||||||| |||| ||||||  ||||||||||||      ||| |||| ||| || || |||||||||||||| |||||| | |||||||||    
T  41497065 catgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccct 41497164  T
Q  331 cccttccc 338  Q
    ||||||||    
T  41497165 cccttccc 41497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 31364128 - 31364070
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcc 342  Q
    ||||||| | ||| ||||||||| |||| |||||| ||| |||||||||||||||||||    
T  31364128 cattttataatgtccgtaatttagaaaagaaaagtaagctctcccctcccttcccctcc 31364070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 47230019 - 47230061
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||  ||||||||||||||||| ||||||||||    
T  47230019 cctcccctcccttttcctcctaaaccctcaattcaaacacacc 47230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 37620951 - 37621012
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||||||||||| |||||  | ||||||||||||||||| ||  |||||||| |||||||||    
T  37620951 taatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctccatccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 38749605 - 38749576
Alignment:
Q  340 tcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||||||||||    
T  38749605 tcctaaaccctcaatccaaacacaccctaa 38749576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 361
Target Start/End: Complemental strand, 41008225 - 41008188
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  41008225 ctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 41008387 - 41008424
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||  |||||||||||||||||    
T  41008387 ccttcccctcctaaaccctgcatccaaacacaccctaa 41008424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 17853072 - 17853104
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||| |||||||||||||||    
T  17853072 tcccctcctaaaccctccatccaaacacaccct 17853104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 365
Target Start/End: Original strand, 24970379 - 24970407
Alignment:
Q  337 ccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||||||||||||||||||    
T  24970379 ccctcctaaaccctcaatccaaacacacc 24970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 35422126 - 35422198
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||| | ||| |||||||| ||||| |||||| | |||||| |||  || |||||||||||||||||||||    
T  35422126 attttataatgtccgtaattttaaaaagaaaagtaaaccctccactctatttccctcctaaaccctcaatcca 35422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 39646630 - 39646678
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    ||||||| | ||| |||||||||||||||||||||||| | ||||||||    
T  39646630 cattttataatgtccgtaatttaaaaaataaaagtgagtcatcccctcc 39646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 363
Target Start/End: Original strand, 39646671 - 39646699
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacaca 363  Q
    |||||||||||||||||||||||||||||    
T  39646671 tcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 135 - 332
Target Start/End: Complemental strand, 8390 - 8182
Alignment:
Q  135 ttaagggtgtgttt-gggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaa 228  Q
    |||||||||||||| |||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8390 ttaagggtgtgtttagggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaa 8291  T
Q  229 ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc 323  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| |||||||||||||||||||||||||||||||||     
T  8290 ttaacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagct 8191  T
Q  324 ctcccctcc 332  Q
    |||| ||||    
T  8190 ctcctctcc 8182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 8e-62; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 1085524 - 1085736
Alignment:
Q  163 ggaggggagggcttacatt-ccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 261  Q
    |||||||||| ||||| || |||||||||| |||  ||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  1085524 ggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaattgaactaacagcatgataaatgatcatataatacttc 1085623  T
Q  262 aaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 356  Q
    ||||||||||||||||     |||| ||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||||    
T  1085624 aaaaacacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatcc 1085723  T
Q  357 aaacacaccctaa 369  Q
    |||||||||||||    
T  1085724 aaacacaccctaa 1085736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 140 - 371
Target Start/End: Complemental strand, 33643499 - 33643264
Alignment:
Q  140 ggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg 239  Q
    |||||||||||  |||||||||||||||||||   ||| ||| ||||||||| |||   ||||| |||||||||||||| ||||||||||||| |  |||    
T  33643499 ggtgtgtttggatagagggtttaggaggggagaattta-atttcttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg 33643401  T
Q  240 atcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccct 334  Q
    || ||||||||| |||||||||||||||||||||||||     |||| |||||||||||| |||||||||||||||||||||||||| | |||| |||||    
T  33643400 atgaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatttttcgtaatttaaaaaataaaagtgagtcatcccttccct 33643301  T
Q  335 tcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||||| |||||| |||||||||||||||    
T  33643300 tcccctcctaaaccttcaatctaaacacaccctaaga 33643264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 183 - 367
Target Start/End: Complemental strand, 35928001 - 35927814
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 278  Q
    ||||||||| ||| |||  ||||||||| ||||| | ||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||    |    
T  35928001 cttttttaaattacagattttataaaataatttt-agaaaattgaattaacaacatgataaatgatcatataatacttcaaaaatacttaatttatttta 35927903  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
     || |   |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  35927902 gaaaaatatttacattgttcataatttaaaaaataaatgtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccct 35927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 40709327 - 40709532
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||| ||||| ||||| || ||||||||| |||   | |||||||||| ||||||| |||||| |||||||   ||||| ||||||||| ||||||||||    
T  40709327 ggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaaattaacgatatgataaatgatcatataatacttca 40709426  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    ||||||||||||||      |||| || ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  40709427 aaaacacttaatttctttttaaaaaaccttttacattgttcataatttaaaaaataaaagtga-ccctcccctccgttcccctcctaaatcctcaatcca 40709525  T
Q  358 aacacac 364  Q
    |||||||    
T  40709526 aacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 159 - 369
Target Start/End: Original strand, 525133 - 525346
Alignment:
Q  159 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 258  Q
    ||||||||||||||  |||| || ||||||||| |||  ||||| ||||||| ||||||| ||| |||||||||||  ||||| |||||| || ||||||    
T  525133 tttaggaggggagga-ttacttttcttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgataaatgattatataatac 525229  T
Q  259 ttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 352  Q
    |||||| | ||||||||||      |||| ||||||||| ||||| |||||||||||| ||||||||| | || || ||||||||| |||||||||||||    
T  525230 ttcaaacaaacttaatttattttaaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctca 525329  T
Q  353 atccaaacacaccctaa 369  Q
    |||||||||||||||||    
T  525330 atccaaacacaccctaa 525346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 135 - 339
Target Start/End: Complemental strand, 47071288 - 47071079
Alignment:
Q  135 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 234  Q
    ||||||||||||||||    ||||||||||| |||| | || || || ||||||||| |||  ||||||||||||||||||||| |||||| ||||||||    
T  47071288 ttaagggtgtgtttggatgaagggtttaggaagggaagactaacttttcttttttaaattacggacattataaaatgatttttagaaaatttaattaaca 47071189  T
Q  235 gcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 329  Q
     |||||| |||||||||  |||| |||||||||||||||     ||| |||| ||||||||||||| |||||||||| ||||||||| ||| |  | |||    
T  47071188 acatgataaatgatcataaaatatttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccc 47071089  T
Q  330 tcccttcccc 339  Q
    ||||||||||    
T  47071088 tcccttcccc 47071079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 25268472 - 25268313
Alignment:
Q  164 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 263  Q
    |||||||||| |||| |||||||||||| |||  || |||||||||||||||||| |||||| ||| |||| | |||| ||||||||| |||||||||||    
T  25268472 gaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaacgtgataaatgatcatataatacttcaa 25268373  T
Q  264 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagt 318  Q
    ||||||||||     |||||||| ||||||||||||||||  ||||||||| ||||||||    
T  25268372 aaacacttaatttattttaaaaatacattttacattgttcaaaatttaaaatataaaagt 25268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 51303467 - 51303384
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51303467 cattttacattgttggtaatataaaaaataaaagtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccct 51303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 183 - 330
Target Start/End: Complemental strand, 2506728 - 2506576
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| ||| ||| |||||||||| ||||||||||||| |||||||||  || || ||||||||| |||||||||||||||||||||||||         
T  2506728 cttttttaaattacagatattataaaataatttttaaaaaatcgaattaacaatataataaatgatcatataatacttcaaaaacacttaatttattttg 2506629  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||| |||||||| |||| ||||||||||||| |||||| ||| |||||||||    
T  2506628 aaaaaacattttatattggtcgtaatttaaaagataaaaatgaaccctcccct 2506576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 51303461 - 51303600
Alignment:
Q  205 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttc 298  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||      ||||| |  |||||||||||||    
T  51303461 taaaatgatttttttaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaaatgttttacattgttc 51303560  T
Q  299 gtaatttaaaaaat-aaaagtgagccctcccctcccttcc 337  Q
    |||||||||||||| |||| ||||||||||| ||||||||    
T  51303561 gtaatttaaaaaataaaaaatgagccctcccttcccttcc 51303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 359
Target Start/End: Original strand, 13386989 - 13387163
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-------------aaaagac 284  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||| ||||||||| ||||||   ||||||||||||||||             |||| ||    
T  13386989 gacatcataaaacgatttttagaaaattgaattaacaacatgataaatgatcatataatacacaaaaaacacttaatttatttataaaaaaaaaaaaaac 13387088  T
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||||||||||    
T  13387089 atttttcattgtttgtaatttaaaaaataaaaatgagtcctccactctctttccctcctaaaccctcaatccaaa 13387163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 137 - 324
Target Start/End: Complemental strand, 1344783 - 1344592
Alignment:
Q  137 aagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 236  Q
    |||| |||||||||   |||||||||||||||||    |||  || ||||||||| |||  |||||| |||||||||||||| |||||||||  |||| |    
T  1344783 aaggatgtgtttggatggagggtttaggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaac 1344684  T
Q  237 atgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 324  Q
    ||||| ||| | ||| || ||| |||||||||||||||||     |||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  1344683 atgataaataaacatatattacatcaaaaacacttaattttttttaaaaaacattttgcattgtttgtaatttaaaaaataaaagtgagccc 1344592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 23536839 - 23536924
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    |||||||| ||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  23536839 tttaaaaaaacattttacattgatcattatttaaaaaataaaaatgagccctcccctcccttcccctcataaatcctcaatccaaa 23536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 35513006 - 35512909
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatactt 260  Q
    |||||||||||||||| ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  35513006 ggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 370
Target Start/End: Complemental strand, 20607390 - 20607220
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta---------aaaagacattt 288  Q
    ||||||||||||||||||||  |||||| ||||||||   ||||  || ||||| |||||||||||||||||||||||||         |||| ||||||    
T  20607390 gacattataaaatgattttttgaaaattaaattaaca---tgatatattatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaacattt 20607294  T
Q  289 tacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
     |||||||   |||||||||||||||||||||||||||||     ||||||||||||||||||||| |||||||||||||||    
T  20607293 -acattgta--taatttaaaaaataaaagtgagccctccc-----ttcccctcctaaaccctcaattcaaacacaccctaag 20607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 367
Target Start/End: Complemental strand, 17622694 - 17622536
Alignment:
Q  215 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacatttta------cattgttcgtaatttaaa 308  Q
    |||||||||||||||||| | |||||| | ||||||| ||||||||| |||||||||||||||  |     |||||      ||||||||||| ||||||    
T  17622694 tttaaaaaattgaattaataacatgataagtgatcatataatacttctaaaacacttaatttattatttttttttaaaattacattgttcgtagtttaaa 17622595  T
Q  309 aaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||| |||||| |  ||||||||||| |||||| ||||||||||||||||    
T  17622594 aaataaaagtgagtcctcccattgcttcccctcctgaacccttaatccaaacacaccct 17622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 278 - 369
Target Start/End: Complemental strand, 38509983 - 38509892
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||| | | ||| |||||||||||||  |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  38509983 aaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaa 38509892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 12234079 - 12234010
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12234079 cgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccct 12234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 30010458 - 30010329
Alignment:
Q  246 gatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccct 340  Q
    |||||| |||||||||||  ||||||||||||      ||| |||| ||| || || ||||||||||| || |||||| |  ||||||||||||||||||    
T  30010458 gatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccct 30010359  T
Q  341 cctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||||||||||||||||||||||    
T  30010358 cctaaaccctcaatccaaacacaccctaag 30010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 40095002 - 40094927
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||||||||  |||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40095002 cgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccctaagagt 40094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 2859107 - 2859169
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 360  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  2859107 cgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 332
Target Start/End: Original strand, 40287325 - 40287467
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt--------aaaaagacatttt 289  Q
    |||||| | |||||| ||||| |||||||||||||||  || || |||||| || ||||||||||||||||||||||||        ||| | | |||||    
T  40287325 gacattgtgaaatgagttttagaaaattgaattaacaaaatcataaatgattatataatacttcaaaaacacttaatttatttaaaaaaatatatatttt 40287424  T
Q  290 acattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    |||| ||||||| |||||||||||||||||||| |||||||||    
T  40287425 acatagttcgtagtttaaaaaataaaagtgagctctcccctcc 40287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 41498476 - 41498404
Alignment:
Q  295 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| |||||||||||  |||||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  41498476 gttcataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccct 41498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 35349637 - 35349708
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  35349637 cgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaa 35349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 26324059 - 26324014
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 26324014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 40709363 - 40709290
Alignment:
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  40709363 ttcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccctaa 40709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 359
Target Start/End: Original strand, 50079476 - 50079620
Alignment:
Q  220 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataa 314  Q
    |||||| || |||||  ||||| ||||||||| |||||||| ||||||||||||||||     |||| |||||||| |||||||||| |||||| |||||    
T  50079476 aaaatttaactaacaatatgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatattgttcgtactttaaataataa 50079575  T
Q  315 aagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||  || | ||| ||||  ||| |||||||||| |||||||||||    
T  50079576 aaaggaactctctcctcttttctcctcctaaacactcaatccaaa 50079620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 12234185 - 12234252
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||  |||| | | |||||||||||||||||||||||||||||| |||||||||||||    
T  12234185 cgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 32951493 - 32951564
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| | | |||||||||||||| ||||||||| |||||||||||||||||||||    
T  32951493 cgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaa 32951564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 38510069 - 38510135
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||| ||||||||| |||| | | ||||||||||||||||||||||||||||| |||||||||||||    
T  38510069 cgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 2859000 - 2858931
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccta 368  Q
    |||||||| |||  |||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2859000 gtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacacccta 2858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 20607416 - 20607461
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  20607416 ccctcccctcccttcccctcctaaaccctccatccaaacacaccct 20607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 30010507 - 30010576
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||||  |||||| | ||||||||||||||||||| |||||||||| |||||||||||||||    
T  30010507 cgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 52707803 - 52707691
Alignment:
Q  213 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 307  Q
    ||||| ||||||| ||| |||| |||||| |||||| || |||||||||||||| || |||||||     |||| ||||||||||||||| ||| |||||    
T  52707803 ttttttaaaaatttaat-aacaacatgataaatgatgatataatacttcaaaaatacataatttatttttaaaaaacattttacattgtttgtagtttaa 52707705  T
Q  308 aaaataaaagtgag 321  Q
    ||||||||||||||    
T  52707704 aaaataaaagtgag 52707691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 1085559 - 1085483
Alignment:
Q  298 cgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||||||||||  |||||| || |||||||||| | |||||||||||||||| ||||||||||||||| |||||    
T  1085559 cgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacacccttagagt 1085483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 7444547 - 7444476
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | ||||||| ||||||| ||||| ||||||||||||| ||||||| ||||    
T  7444547 cgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacactctaa 7444476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 20576176 - 20576130
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacactctaag 20576130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 26941042 - 26941080
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccctaag 26941080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 363
Target Start/End: Complemental strand, 51597793 - 51597672
Alignment:
Q  247 atcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctc 341  Q
    ||||| |||||||||||  ||||||||     |||||||| |||| ||| || || ||| |||||||||| |||||| | | ||||||||||||||  ||    
T  51597793 atcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaactctcccctcccttcctttc 51597694  T
Q  342 ctaaaccctcaatccaaacaca 363  Q
     |||||||||||||||||||||    
T  51597693 ataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 369
Target Start/End: Complemental strand, 2470820 - 2470728
Alignment:
Q  277 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||| |||||||| | |||||||||||||||||   |||   | ||||||  || ||||||||||||||||||| |||||||||||||||||    
T  2470820 aaaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaa 2470728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 41498579 - 41498651
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctccctt-cccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| |  ||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  41498579 cgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactctccatccaaacacaccctaa 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 35512694 - 35512638
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||||||||||||||||||||||||||     ||||||||||||||||| |||||||||||    
T  35512694 tttaaaaaataaaagtgagccctccccc----tcccctcctaaaccctccatccaaacaca 35512638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 40095041 - 40095183
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 329  Q
    |||||| || |||||| |||||||||||  ||||||||||||      |||| |||| ||| || ||  ||||||||||||  |||||| | |||| ||     
T  40095041 catgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaacccttcct 40095140  T
Q  330 tcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||  ||| |||||||||||||||||||||||||| ||||    
T  40095141 tcccttttccttctaaaccctcaatccaaacacacccttagag 40095183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 49832615 - 49832544
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||||||| |||||| ||| |||| ||| |||||||||||||||| | ||||||||  |||||||||    
T  49832615 gtaatttaaaaaagaaaagtaagctctcctctcacttcccctcctaaaccttgaatccaaatgcaccctaag 49832544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 35927988 - 35928058
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||| |||||| |  | ||||  |||||||||| |||| |||||||||||||||||||||||    
T  35927988 gtaatttaaaaaagaaaagtaaatcatccctccccttccccttctaagccctcaatccaaacacaccctaa 35928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 10391941 - 10391880
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    |||||||||||||  |||||| | ||||||||||  ||||||||||||| ||||||||||||    
T  10391941 cgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaaacctcaatccaaa 10391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 25268439 - 25268500
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||||||||||||||  ||||| | |||||||||| |||||||| |||||||||| |||||||    
T  25268439 cgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 8529841 - 8529807
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||||||| ||||||||    
T  8529841 tcccctcctaaaccctcaatccaaacgcaccctaa 8529807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 28770897 - 28770967
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||  |||| | | |||||| |||| || |||||||||||| || |||||||||||||||||    
T  28770897 gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttccatccaaacacaccctaa 28770967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 35349533 - 35349466
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | |||||||| ||  ||||||| ||||||||| |||||||||||||||    
T  35349533 cgtaatttaaaaatgaaaagtaaaccctccccccc--tcccctcttaaaccctccatccaaacacaccct 35349466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 2470934 - 2470966
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||||||| |||||||||||||||    
T  2470934 ccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 369
Target Start/End: Original strand, 41676435 - 41676522
Alignment:
Q  277 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||| |||||||| | ||| |||||||||||||  |||||| | |||||||||| ||     |||||||||||| ||||||||||| |||||    
T  41676435 aaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctctct-----tcctaaaccctcgatccaaacacatcctaa 41676522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 44210994 - 44211054
Alignment:
Q  217 taaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 277  Q
    ||||||||| || ||||| |||||| || |||||| |||||||||||  ||||||||||||    
T  44210994 taaaaaattaaaataacaacatgataaacgatcatataatacttcaatcacacttaattta 44211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 49946768 - 49946828
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||||| || |||||| | ||||| | |||||||||| ||||| |||||||||||||||||    
T  49946768 tttaaacaagaaaagtaaaccctcacatcccttccccgcctaatccctcaatccaaacaca 49946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 52428068 - 52428147
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||| ||||||||| |||||||||| | || |||| |||||||||| ||| ||||||  ||| ||||| |||||    
T  52428068 attttacattggtcgtaattt-aaaaataaaaataagtcctctcctcccttcctctcataaacctacaacccaaatacacc 52428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 5e-60; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 198 - 369
Target Start/End: Complemental strand, 15353537 - 15353362
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---attt-aaaaagacattttacat 293  Q
    ||||||||||||||||||||| ||||||||||||||| ||| || ||||||||| |||||| |||||||||||||   |||| ||||| |||||||||||    
T  15353537 gacattataaaatgatttttagaaaattgaattaacaacattataaatgatcatataatacatcaaaaacacttatttatttcaaaaaaacattttacat 15353438  T
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  15353437 tgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaa 15353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 198 - 369
Target Start/End: Complemental strand, 15323399 - 15323223
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 292  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| ||| ||||||||||||||     |||| | ||||||||    
T  15323399 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcagaaacacttaatttattttaaaaatatattttaca 15323300  T
Q  293 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  15323299 ttgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaa 15323223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 184 - 367
Target Start/End: Original strand, 9051590 - 9051776
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 278  Q
    |||||||| |||  || |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |  ||||| ||||||||||||||||     |    
T  9051590 ttttttaaattacggatattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatatgctactttaaaaacacttaatttatttaaa 9051689  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||| | |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  9051690 aaaaatattttacattgttcgtaatttaaaaa-taaaagtgagca-tcccctcccttcccctcttaaaccctcaatccaaacacaccct 9051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 165 - 371
Target Start/End: Complemental strand, 31799128 - 31798914
Alignment:
Q  165 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 264  Q
    ||||||| | |||| || ||||||||| |||  || |||||||||| |||||| |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  31799128 aggggagagtttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatgataaatgatcatataatacttcaaa 31799029  T
Q  265 aacacttaattta--------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 356  Q
    |||| ||  ||||        |||| ||||||||||||| ||||||||||||||||||||| ||| | || |||| |||  |||||||||||||||||||    
T  31799028 aacattttttttattaaaaaaaaaaaacattttacattgctcgtaatttaaaaaataaaagcgagtcatctcctctcttatcctcctaaaccctcaatcc 31798929  T
Q  357 aaacacaccctaaga 371  Q
    |||||||||||||||    
T  31798928 aaacacaccctaaga 31798914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 10293457 - 10293248
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||| |||||| || |||||| || ||| ||| |||||||||||||||||| |||| |||||| ||| ||| || ||| ||||| ||||||||||    
T  10293457 ggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaacatcataaataatcatataatacttca 10293358  T
Q  263 aaaacacttaatttaa---aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||||    |||||||    ||| | |||||||||||||||||||||||||||||||||||||||||||||||  || |  |||||||||| |||||||||    
T  10293357 aaaatcggtaatttattttaaaaatattttacattgttcgtaatttaaaaaataaaagtgagccctcccctctttttctttcctaaacccacaatccaaa 10293258  T
Q  360 cacaccctaa 369  Q
    ||||||||||    
T  10293257 cacaccctaa 10293248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 23091114 - 23090995
Alignment:
Q  253 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaac 347  Q
    |||||||||||||||||||||||||     |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23091114 taatacttcaaaaacacttaatttagtttaaaaatacattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccctcctaaac 23091015  T
Q  348 cctcaatccaaacacaccct 367  Q
    | ||||||||||||||||||    
T  23091014 cttcaatccaaacacaccct 23090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 26318475 - 26318345
Alignment:
Q  202 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgt 296  Q
    ||||||||||| ||||| ||||||||||||||| |||||| | ||||||| |||||||||||||||||||||     |||||||| |||||||| ||| |    
T  26318475 ttataaaatgacttttagaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttt 26318376  T
Q  297 tcgtaatttaaaaaataaaagtgagccctcc 327  Q
    |||||||||||||||||||| ||| ||||||    
T  26318375 tcgtaatttaaaaaataaaaatgaaccctcc 26318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 367
Target Start/End: Original strand, 4097305 - 4097480
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-----------aaaaagacat 286  Q
    |||||||||||||  |||||| ||||||||||||||| |||||| |||||||||  |||||||| ||||||||||||||           ||||| ||||    
T  4097305 gacattataaaatattttttagaaaattgaattaacaacatgataaatgatcatacaatacttccaaaacacttaatttatttttaaaaaaaaaaaacat 4097404  T
Q  287 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||  ||||||||||||||||||||| | |||||     ||||||||||||||||| |||| ||||||||||    
T  4097405 tttacattgttcacaatttaaaaaataaaagtgagtcatcccc-----tcccctcctaaaccctccatcctaacacaccct 4097480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 369
Target Start/End: Original strand, 4097620 - 4097759
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 329  Q
    |||||| || |||||| |||||||||||  ||||||||||||      |||| | || ||| ||||| |||||||||||||| |||||||| |||| |||    
T  4097620 catgataaacgatcatataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttccc 4097719  T
Q  330 tcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  4097720 tcccttcccctcttaaaccctcaatccaaacacactctaa 4097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 14515542 - 14515467
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||||||||| ||||   | |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14515542 cgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagagt 14515467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 10818425 - 10818229
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| |||| || | ||||||| |||  |||| ||| ||||| ||||||||| ||| |  ||  | |||||| ||||||||| ||||||||||    
T  10818425 ggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttca 10818326  T
Q  263 aaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    |  |||     |||||||   ||| ||| ||||| |||||||||||||| |||| | | |  ||||||||||||||||||||||||||||||||||||||    
T  10818325 atcaca-----tttaaaa---catgttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacac 10818234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 371
Target Start/End: Original strand, 25468454 - 25468639
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----ttta 277  Q
    ||||||||| |||  ||||||||||||| ||||| | |||||| | |||||| | |||| |||||| || |||||||||||||||||||||     ||||    
T  25468454 cttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgattatataatacttcaaaaacacttaatttatttta 25468553  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||| |||        ||||||||||| |||| ||||||||||  ||| ||||||||| ||||| |||||| | |||||||||||||| |||||    
T  25468554 aaaaaaca--------tgttcgtaattaaaaatataaaagtgaatccttccctcccttaccctcttaaaccattaatccaaacacaccttaaga 25468639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 30487373 - 30487306
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||  |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 30487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 3841284 - 3841180
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgattttt--aaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt 271  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||  | |||||||||||||||  ||||| |||||| || |||||||||||||||||||    
T  3841284 cttacttttcttttttaaattacggacattataaaatgatttttttacaaaattgaattaacaa-atgataaatgatgatataatacttcaaaaacactt 3841186  T
Q  272 aattta 277  Q
    ||||||    
T  3841185 aattta 3841180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 12811157 - 12811227
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||| || |||||| | |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccctaag 12811227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 15373669 - 15373739
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaaca 268  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| |||||||||    
T  15373669 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 9721207 - 9721138
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||| | | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9721207 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacaccct 9721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 366
Target Start/End: Original strand, 10818366 - 10818459
Alignment:
Q  273 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    |||| |||| |||||| | | ||| |||||||||||||  |||||| | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  10818366 attttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 34177060 - 34177137
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 360  Q
    ||||||||||||||||||||||||||||||||||||||| | |  ||||||||||  ||||||||| |||||| ||||    
T  34177060 acattttacattgttcgtaatttaaaaaataaaagtgagtcatttcctcccttcctttcctaaaccttcaatctaaac 34177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 9719100 - 9719034
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||  |||| | |  ||||||||||||||||||||||||||||||||||||||||||    
T  9719100 cgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 19278213 - 19278278
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||| |||| | | |||||||||||||||||||||||||| ||||||||||||||||    
T  19278213 cgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 23091133 - 23091195
Alignment:
Q  298 cgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||    
T  23091133 cgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 30487480 - 30487546
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||| |||||||||||||| | | |||||| ||||||||||||||||||||||||||| ||||||||    
T  30487480 cgtagtttaaaaaataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 367
Target Start/End: Complemental strand, 665929 - 665841
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||| | | | ||| |||||||||||  |||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  665929 aaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctc-atccaaacacaccct 665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 31849174 - 31849105
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||||| |||| | | |||||||||||||||||||| |||||||||||||| ||||||| |||||||    
T  31849174 tttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacactctaagag 31849105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 34176606 - 34176711
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||| | ||||| || ||||||||| |||   | |||||||| |||||||||||||||||||||||||  || || ||||||||| ||||| ||||    
T  34176606 ggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatataataaatgatcatataatatttca 34176705  T
Q  263 aaaaca 268  Q
    ||||||    
T  34176706 aaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 4097317 - 4097229
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||| | ||| ||| ||| ||||||||||||| | | |||  || |||||||||||||||||||||||||||||||||||| |||||    
T  4097317 attttataatgtccgtgattcaaaaaataaaagtaaactctcatcttccttcccctcctaaaccctcaatccaaacacacccttagagt 4097229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 366
Target Start/End: Original strand, 9719178 - 9719273
Alignment:
Q  270 ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    ||||||||||||| ||| ||| || || || ||||||||||| |||| | | ||| |||||| ||||||||| ||||||||||||||||||||||||    
T  9719178 ttaatttaaaaag-catgttatatagtccggaatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 15373737 - 15373776
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagc 322  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373737 acattttacattgttcgtaatttaaaaaataaaagtgagc 15373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 1300661 - 1300623
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1300661 tcccctcctaaaccctcaatccaaacacaccctaagagt 1300623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 14515633 - 14515719
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||| | ||||| |||||||||||  |||  | | ||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  14515633 attttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccctaaga 14515719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 9051603 - 9051530
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||||||||| |||||| | || || ||||| || |||||||||| ||||||||||||| ||||||||||    
T  9051603 cgtaatttaaaaaaaaaaagtaaaccatctcctccatttccctcctaaatcctcaatccaaacgcaccctaaga 9051530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 9298690 - 9298738
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  9298690 ccctcccctcccttcccctcctaaccccttcatccaaacacaccctaag 9298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 16738172 - 16738239
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||| |||||| | | ||||||||| ||||| |||||||||||||||||||||| |||||    
T  16738172 gtaatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaaccctcaatccaaacaaaccct 16738239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 28477116 - 28477076
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattt 276  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  28477116 catgataaatgatcatgtaatacttcaaaaacacttaattt 28477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 29693014 - 29692974
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattt 276  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  29693014 catgataaatgatcatgtaatacttcaaaaacacttaattt 29692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 34176642 - 34176586
Alignment:
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 352  Q
    |||||||||||||||| |||||| || | ||||||||| ||||||||||||||||||    
T  34176642 ttcgtaatttaaaaaagaaaagtaagtcttcccctcccatcccctcctaaaccctca 34176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 5287471 - 5287514
Alignment:
Q  273 atttaaaaagacattttacattgttcgtaatttaaaaaataaaa 316  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  5287471 atttaaaaaaacattttatattgttcgtaatttaaaaaataaaa 5287514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 364
Target Start/End: Original strand, 30850063 - 30850153
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||| |||| ||| ||  ||| |||||||||| | |||||| | | ||||| || ||| ||||||||||||||||||||||||||||    
T  30850063 tttaaaaaaacatattatataattcataatttaaaataaaaaagtaaactctcccttctctttccctcctaaaccctcaatccaaacacac 30850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 9721285 - 9721385
Alignment:
Q  270 ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||| |||| ||| || || || ||||||||||| |||| | | ||| |||||| ||| || || |||||||||||| ||||||||||||||    
T  9721285 ttaatttaaaaa-acatgttatatggtccggaatttaaaaaagaaaattaaacccacccctctcttaccttcataaaccctcaattcaaacacaccctaa 9721383  T
Q  370 ga 371  Q
    ||    
T  9721384 ga 9721385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 10293424 - 10293484
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    ||||||| ||||| |||||| ||| ||||||||||||| |||||||||||||  |||||||    
T  10293424 gtaatttgaaaaagaaaagtaagctctcccctcccttctcctcctaaacccttcatccaaa 10293484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 369
Target Start/End: Original strand, 21607054 - 21607090
Alignment:
Q  333 cttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21607054 cttcccctcctaaaccctcaatccaaacacactctaa 21607090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 26318482 - 26318546
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||| |||||| |  | ||||||||||| ||||||||||| ||| ||||||||||||    
T  26318482 taatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 1300789 - 1300864
Alignment:
Q  292 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||| |||||||||||||  |||||| | ||||||||||| |||  || | |||||||| |||||||||||||||    
T  1300789 attgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatccaaacacaccct 1300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 3841247 - 3841330
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| | ||| |||||||||||||| |||||| || | |||  |  ||||||||||||||||||  |||||||||||||||    
T  3841247 cattttataatgtccgtaatttaaaaaagaaaagtaagtcttccattttcttcccctcctaaacccttcatccaaacacaccct 3841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 5585375 - 5585304
Alignment:
Q  294 tgttcgtaatttaaaaaataaaa-gtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||||||| |||| || | | || || | |||||||||||||||||||| ||||||||||||    
T  5585375 tgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 19278102 - 19278039
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||||||  |||||| | | ||| ||| |||||||||||||||||||| ||||||||||    
T  19278102 gtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 33236020 - 33235949
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | |  ||| |||||||| || |||||| |||||||||||| |||||||||    
T  33236020 cgtaatttaaaaaagaaaagtaaactttccactcccttctccacctaaatcctcaatccaaatacaccctaa 33235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 31849265 - 31849319
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    ||||||||||||| | ||| |||||||||||||  |||||||| |||||||||||    
T  31849265 aaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 21606886 - 21606854
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||| |||||||||||||||    
T  21606886 tcccctcctaaaccctccatccaaacacaccct 21606854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 33041513 - 33041473
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  33041513 ctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 4e-57; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 184 - 367
Target Start/End: Complemental strand, 31061547 - 31061359
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 278  Q
    |||||||| ||| |||||||||||| ||| ||||  ||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||     |    
T  31061547 ttttttaaattacagacattataaagtgactttttgaaaattgaattaacaacatgataaatgatcatataatatttcaaaaacacttaatttattttaa 31061448  T
Q  279 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  31061447 aaacacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccct 31061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 183 - 367
Target Start/End: Complemental strand, 45257496 - 45257307
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| |||  || |||||||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||         
T  45257496 cttttttaaattacggatattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttatttta 45257397  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    | || |||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||    
T  45257396 agaaaacattttacattgttcgtaatttataaaataaaagtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccct 45257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 42296349 - 42296549
Alignment:
Q  174 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 273  Q
    ||||| || ||||||||| |||  || |||||||||||| ||||| |||| |||||||||| ||| || ||||||||| ||||| || ||||||||||||    
T  42296349 cttacttttcttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacataataaatgatcatataataatttaaaaacacttaa 42296448  T
Q  274 tt-----taaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccta 368  Q
    ||     |||||| | ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  42296449 ttcattttaaaaaaatattttacatcgttcgtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacacccta 42296548  T
Q  369 a 369  Q
    |    
T  42296549 a 42296549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 205 - 359
Target Start/End: Complemental strand, 33265773 - 33265615
Alignment:
Q  205 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgt 300  Q
    |||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||    |||| |  |||||||||||||||    
T  33265773 taaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaatgttttacattgttcgt 33265674  T
Q  301 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    |||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||    
T  33265673 aatttaaaaaataaaaatgagtcatcgcctcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 202 - 365
Target Start/End: Original strand, 3094427 - 3094595
Alignment:
Q  202 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgt 296  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||| ||||| |||||||||||||||||     ||| |||| ||| ||||||||||| ||    
T  3094427 ttataaaatgattcttagaaaattgaattaacaacatgataaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagt 3094526  T
Q  297 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    | ||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||    
T  3094527 ttgtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 201 - 367
Target Start/End: Original strand, 2381060 - 2381231
Alignment:
Q  201 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattg 295  Q
    |||||||||||| ||||| ||||||||||| ||| ||||||  ||||| || |||||||||||||||||||||||||     |||| |||||||||||||    
T  2381060 attataaaatgaattttagaaaattgaattgacaacatgattgatgatgatataatacttcaaaaacacttaatttattttaaaaaaacattttacattg 2381159  T
Q  296 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||||||| | |||||||||| | ||||| ||||||| ||||||||| |||||||    
T  2381160 ttcgtaatttaaaaaataaaagtgaactctcccctcccattccctcataaacccacaatccaaatacaccct 2381231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 366
Target Start/End: Original strand, 1052811 - 1053000
Alignment:
Q  184 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------ 277  Q
    |||||||| |||  || |||||||||| ||||||| ||||||||||||||| |||||| ||||||| | ||||| |||||||||| ||||||||          
T  1052811 ttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatgataaatgatcgtataatatttcaaaaacatttaatttatttaaa 1052910  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc-ctcctaaaccctcaatccaaacacaccc 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||| ||||||||||| ||||||    
T  1052911 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagctctcctctcctttcccgctcctaaactctcaatccaaatacaccc 1053000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 205 - 360
Target Start/End: Original strand, 31928121 - 31928286
Alignment:
Q  205 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----------aaaagacattttacatt 294  Q
    |||||||||||||  ||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||          |||| ||||||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaaacattttacatt 31928220  T
Q  295 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 360  Q
    ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  31928221 gtttgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 198 - 367
Target Start/End: Complemental strand, 34187751 - 34187575
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgta--atacttcaaaaacacttaattta-----aaaagacatttta 290  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||| || ||  |||||||||||||||||||||||     | || |||| |||    
T  34187751 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatatataatacttcaaaaacacttaatttattttaataaaacatctta 34187652  T
Q  291 cattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    | |||||||||||||||||| ||||||||| || |||||| |||||| ||||||||| |||||||||||||||||||    
T  34187651 cgttgttcgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacaccct 34187575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 15085770 - 15085911
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttac 291  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||      |||| | ||||||     
T  15085770 gacattataaaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttcaaaaacacttaatttattttttaaaaaatattttat 15085869  T
Q  292 attgttcgtaatttaaaaaataaaagtgagccctcccctccc 333  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  15085870 attgttcgtaatttaaaaaataaaagcgagccctcccatccc 15085911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 245 - 367
Target Start/End: Original strand, 1270394 - 1270522
Alignment:
Q  245 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc 338  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  1270394 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 1270493  T
Q  339 ctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||||||||||||| ||||||    
T  1270494 ctcctaaatcctcaatccaaacgcaccct 1270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 185 - 363
Target Start/End: Complemental strand, 35325456 - 35325271
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------a 277  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| |||||||||       |    
T  35325456 tttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgataaatgatcatataatacttcaaaaatacttaatttattttaaa 35325357  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||| | |||||||||||||||||||| ||||||||||||| || | | |||| | || | ||||||||||||||||  |||||||    
T  35325356 aaaatatattttacattgttcgtaattaaaaaaataaaagtaagtcattcccttcatttctctcctaaaccctcaatttaaacaca 35325271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 45098355 - 45098218
Alignment:
Q  186 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaa 280  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||     |||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaa 45098256  T
Q  281 agacattttacattgttcgtaatttaaaaaataaaagt 318  Q
    | |||||||||||| || ||||| ||||||||||||||    
T  45098255 atacattttacattatttgtaatgtaaaaaataaaagt 45098218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 17333936 - 17334059
Alignment:
Q  253 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaa-aataaaagtgagccctcccctcccttcccctcctaaa 346  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| |||| |||||| |||||||||||| |||||||| |||||||||||||||    
T  17333936 taatacttcaaaaacacttaatttattttaaaaagacattttacattgtttgtaacttaaaaaaataaaagtgagtcctccccttccttcccctcctaaa 17334035  T
Q  347 ccctcaatccaaacacaccctaag 370  Q
    |||||||| |||| ||||||||||    
T  17334036 ccctcaattcaaaaacaccctaag 17334059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 22356179 - 22356250
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22356179 cgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaa 22356250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 23748250 - 23748339
Alignment:
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||| | | ||| |||| ||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  23748250 aaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 36052118 - 36052230
Alignment:
Q  159 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 258  Q
    |||||||||||| | ||||| || || |||||| ||| | |||||||||||||||||||| ||||||||||||||| ||| ||  |||||||| | ||||    
T  36052118 tttaggaggggacgacttacttttctattttaaattacatacattataaaatgatttttagaaaattgaattaacaacatcatacatgatcatatgatac 36052217  T
Q  259 ttcaaaaacactt 271  Q
    |||||||||||||    
T  36052218 ttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 35736240 - 35736173
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35736240 atttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 35736173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 36347716 - 36347787
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  36347716 cgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccctaa 36347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 35736365 - 35736431
Alignment:
Q  301 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  35736365 aatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccct 35736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 17379891 - 17379842
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17379891 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 17379842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 367
Target Start/End: Complemental strand, 41778902 - 41778773
Alignment:
Q  243 aatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcc 337  Q
    ||||||||| |||||||||||  ||||||||||||     |||| |||||||| | ||| | |||||||||  | |||||| | |||||||||||||| |    
T  41778902 aatgatcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttc 41778803  T
Q  338 cctcctaaaccctcaatccaaacacaccct 367  Q
    ||| ||||||||||||||||||||||||||    
T  41778802 ccttctaaaccctcaatccaaacacaccct 41778773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 15224802 - 15224938
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  |||||||||||||| |||||| | || ||||||    
T  15224802 catgataaatgatcatataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccct 15224901  T
Q  331 cccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||  |||||||||||||||    
T  15224902 cccttcccctcctaaacccttgatccaaacacaccct 15224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 42813781 - 42813864
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| | |||||||||||||||||| |||| | |||| ||||||| ||||||||||||||||||  |||||||||||||||    
T  42813781 cattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccct 42813864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 365
Target Start/End: Complemental strand, 16713628 - 16713494
Alignment:
Q  236 catgatcaatgatcatgtaatacttcaaaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    |||||| |||||  || ||||||||||||||||| ||||||     ||||| | |||||| ||||| ||||||||||||| ||||| ||| |  |||| |    
T  16713628 catgataaatgaatatataatacttcaaaaacacataatttcttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatccctt 16713529  T
Q  331 cccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||| ||||||||||||| |||||||||    
T  16713528 cccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 8554369 - 8554446
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 275  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| ||||||| |  ||||||||||||||||| ||||    
T  8554369 gacattataaaataattttttaaaaattgaattaacatcatgataaatgatcgtacaatacttcaaaaacactcaatt 8554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 22356093 - 22356016
Alignment:
Q  244 atgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaa 316  Q
    ||||| || ||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||||||||||    
T  22356093 atgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaa 22356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 367
Target Start/End: Complemental strand, 887051 - 886919
Alignment:
Q  237 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 331  Q
    ||||| ||||||||| |||||||||||  |||| |||||||     ||||  ||||||| |||||  ||||||||||||| |||||| ||||||||| |     
T  887051 atgataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctccctta 886954  T
Q  332 ccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||||||||||| || ||||||||||    
T  886953 ccttcccctcctaaaccctcaa-cccaacacaccct 886919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 887285 - 887356
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||||||    
T  887285 cgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaaccttc-atccagacacaccctaag 887356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 9313188 - 9313079
Alignment:
Q  171 gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatc----atgtaatacttcaaaaa 266  Q
    |||||||| || | ||||||| ||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||||    || | ||||||||||||    
T  9313188 gggcttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttgataaatgatcgatcatattatacttcaaaaa 9313089  T
Q  267 cacttaattt 276  Q
    ||||||||||    
T  9313088 cacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 332
Target Start/End: Complemental strand, 21502204 - 21502067
Alignment:
Q  201 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------aaaaagacattttacat 293  Q
    |||||||||| ||||| | ||||||| ||||||| || ||| |||| |||| ||||||||||||||||||||||||       ||||| | |||||| ||    
T  21502204 attataaaataattttaagaaaattgcattaacaacaagataaatggtcatataatacttcaaaaacacttaatttatttttaaaaaaaatattttatat 21502105  T
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    |||||||||||| |||||||||  ||| |||||||||||    
T  21502104 tgttcgtaattt-aaaaataaatctgaaccctcccctcc 21502067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 23739882 - 23740005
Alignment:
Q  254 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 348  Q
    ||||||||||||||| ||||||||     |||| ||||||||| || |||||||||||||||||||| || |||||||| | | ||| |||||||||| |    
T  23739882 aatacttcaaaaacatttaatttattttaaaaaaacattttacttttttcgtaatttaaaaaataaatgttagccctcctccctctttccctcctaaatc 23739981  T
Q  349 ctcaatccaaacacaccctaagag 372  Q
    ||| || |||||||| | ||||||    
T  23739982 ctcgattcaaacacatcttaagag 23740005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 36046377 - 36046443
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||| |||||| | || ||||||||||||||||| |||||||||||||||||||||||    
T  36046377 cgtaatttaaaaaacaaaagtaaacc-tcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 2381057 - 2380987
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctccc-ttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||||| |||| |||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  2381057 tttaaaaaagaaaaatgagtcctcccctccccttcccctcctaaaccctctatccaaacacatcctaagag 2380987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 42813828 - 42813726
Alignment:
Q  164 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 263  Q
    ||||||| ||||||  || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| | |||| ||| ||||| |||||||| ||    
T  42813828 gaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacctgataaataatcatataatactttaa 42813729  T
Q  264 aaa 266  Q
    |||    
T  42813728 aaa 42813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 45257482 - 45257553
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | || || ||||||||||| ||||||| |||| |||||||||||||||||    
T  45257482 cgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaa 45257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 17380043 - 17380085
Alignment:
Q  325 tcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccct 17380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 31795838 - 31795772
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||  |||||| || |||||||||||||| |||| ||||||||| ||||||||||||    
T  31795838 cgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 9631735 - 9631804
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | |||||  ||||||| ||||||||||||||| |||||||||||||||    
T  9631735 cgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccct 9631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 40022407 - 40022359
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  40022407 ccctcccc-cccttaccctcctaaaccctcaatccaaacacaccctaaga 40022359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||  |||||| | | |||||||||||| ||||||||||||||||||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 14196819 - 14196878
Alignment:
Q  273 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    |||| |||| |||||||| | |||||||||||||||||| |||||| |||||||||||||    
T  14196819 attttaaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctcc 14196878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 31061543 - 31061598
Alignment:
Q  306 aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||    
T  31061543 aaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 9427053 - 9426987
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||| ||||   | ||||| ||||||||||||||||||||  ||||||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 15224188 - 15224142
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||    
T  15224188 ctcccctcccttcccctcctaaaccctccatccaaaggcaccctaag 15224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 31795968 - 31796010
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccctaa 31796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 33265767 - 33265813
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  33265767 cattttacattgttcataatttaaaaaataaaagcgagtcctcccct 33265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 41841750 - 41841684
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||| ||||   | ||||||| |||||| |||||||||| ||||||||||||||||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 8426946 - 8426881
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||| ||| || |||| |||||    
T  8426946 taatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacacc 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 36347610 - 36347541
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||| ||||||  |||||||| | ||| | |||||||||||||||||||||  |||||||||||||||    
T  36347610 cgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacaccct 36347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 36046273 - 36046205
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 366  Q
    |||||||||||||  |||| | | | ||||||||  |||||||||||||||||| ||||||||||||||    
T  36046273 cgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 2241479 - 2241413
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||| || | |||||| | | |||||||||||||||||||| ||||||||||| |||||||||    
T  2241479 cgtaatttataataaaaaagtaaactctcccctcccttcccctcct-aaccctcaatctaaacacacc 2241413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 8554446 - 8554497
Alignment:
Q  318 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| |||||||||| |||||||| |||||  ||||||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccctaa 8554497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 364
Target Start/End: Complemental strand, 12541808 - 12541773
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12541808 ctcccctcccctcctaaaccctcaatccaaacacac 12541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 17331478 - 17331415
Alignment:
Q  304 ttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| |||||| | ||||||||||| |||||||||| |||||||  | ||||||||||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctctttgcaaacacaccct 17331415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 40022524 - 40022615
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||| |||||| | | |||  ||||||||||||  ||| || | ||||||||||||||| |||| ||||||||| |||||| ||||||    
T  40022524 tttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 23748137 - 23748103
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||| |||||||||||||||||    
T  23748137 tcccctcctaaaccctcgatccaaacacaccctaa 23748103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 31795804 - 31795918
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||| ||||| || | ||||||| |||  |||| ||| ||| | ||||| ||||| | || ||||| |||||| || |||||| ||||||||||    
T  31795804 ggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatataatacttca 31795903  T
Q  263 aaaacacttaattta 277  Q
    |  ||||||||||||    
T  31795904 atcacacttaattta 31795918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 36567063 - 36567093
Alignment:
Q  334 ttcccctcctaaaccctcaatccaaacacac 364  Q
    |||||||||||||||||||||||||||||||    
T  36567063 ttcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 9427200 - 9427233
Alignment:
Q  337 ccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||| ||||||||||||||||||||||||||    
T  9427200 ccctcctgaaccctcaatccaaacacaccctaag 9427233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 16713730 - 16713771
Alignment:
Q  328 cctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  16713730 cctcccttcctttcctaaaccctccatccaaacacaccctaa 16713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 19567020 - 19567057
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19567020 ccctcccctcctctcctaaaccctcaatccaaacacac 19567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 14187111 - 14187167
Alignment:
Q  165 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaa 221  Q
    |||||||||||||| || ||||||||| ||| | ||||||||||||| |||| ||||    
T  14187111 aggggagggcttacttttcttttttaaattataaacattataaaatgtttttgaaaa 14187167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 369
Target Start/End: Original strand, 21662324 - 21662456
Alignment:
Q  243 aatgatcatgtaatacttcaaaaacactta----atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc--cctcccttc 336  Q
    ||||||||| |||||||||||  | |||||    |||| |||| |||||||||| |||   || ||||||| | |||||| || |||||  |||||| ||    
T  21662324 aatgatcatataatacttcaatcaaacttaattgattttaaaaaacattttacagtgtctatactttaaaagagaaaagtaaggcctcccgcctcccctc 21662423  T
Q  337 ccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| |||||||| ||||||||| |||||||    
T  21662424 ccctccaaaaccctccatccaaacataccctaa 21662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 22356173 - 22356141
Alignment:
Q  202 ttataaaatgatttttaaaaaattgaattaaca 234  Q
    ||||||||||||||||| |||||||||||||||    
T  22356173 ttataaaatgatttttagaaaattgaattaaca 22356141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 41414313 - 41414078
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagc 236  Q
    |||||||||||||   | |||||||||||||||| | |||| || ||||||| || | |  ||||||||||||||||||||| |||||||| |||||| |    
T  41414313 agggtgtgtttggatggtgggtttaggaggggagtgtttacttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaac 41414214  T
Q  237 atgatcaatgatcatgtaatacttcaaaaac-----acttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 331  Q
    ||||| ||||||||| |||||||||||||||     | ||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  41414213 atgataaatgatcatataatacttcaaaaacgcttgatttattttaaaaaaacattttaccttgttcataatttaaaaaataaaagtgagccctcccctc 41414114  T
Q  332 ccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||||||||||||||||||| ||||| |||||    
T  41414113 cctttccctcctaaaccctcaatctaaacataccct 41414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 139 - 328
Target Start/End: Complemental strand, 40858798 - 40858604
Alignment:
Q  139 gggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcat 238  Q
    ||||||||||||   |||||||||||||||||||| |||  || ||||||||| |||  |||||||||||||||| |||  ||||||||||||||| |||    
T  40858798 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacat 40858699  T
Q  239 gatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 328  Q
    ||| ||||||||| |||||||||||||||||     ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40858698 gataaatgatcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 40858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 165 - 361
Target Start/End: Original strand, 16884010 - 16884209
Alignment:
Q  165 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 264  Q
    ||||||||||||||||| ||||||||||||| | | || ||||||  | |||||||||||||||| |||| |||||| ||||||||| ||||||||||||    
T  16884010 aggggagggcttacatttcttttttaatttacaaatat-ataaaaaaaattttaaaaaattgaat-aacaacatgataaatgatcatataatacttcaaa 16884107  T
Q  265 aacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 359  Q
    |||||||||||||     ||||||||||||||||||||||||| |||||||||||||||||| | |  | |||||||| |||||||||||||||||||||    
T  16884108 aacacttaatttattttaaaaagacattttacattgttcgtaacttaaaaaataaaagtgagtcttatcatcccttcctctcctaaaccctcaatccaaa 16884207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 34641199 - 34641000
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||||||||||||||| || ||||||||| |||  ||||||||||||||||||  | ||||||||||||||| |||||| ||||||||| ||||||||||    
T  34641199 ggaggggagggcttacttttcttttttaaattacggacattataaaatgattt--agaaaattgaattaacaacatgataaatgatcatataatacttca 34641102  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     ||||  | |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  34641101 aaaacacttaatttattttaaaaaatccttttacattgttcgtaatttaaaaaataaaagtgagccctccc----------ctcctaaaccctcaatcca 34641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 183 - 361
Target Start/End: Original strand, 10943669 - 10943852
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||| ||| || ||| || || |||||||||||||||||||||||||         
T  10943669 cttttttaaattatagatattataaaatgatttttagaaaattgaattaacaacataataaataattatataatacttcaaaaacacttaatttatttta 10943768  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| |||||||||| ||| ||||| |||||||||||||||||||    
T  10943769 aaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 183 - 363
Target Start/End: Original strand, 17474261 - 17474446
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| |||  ||||||||||||| |||||| ||||||||||||||||  ||||| ||| ||||  |||||||||||||||||||||||||         
T  17474261 cttttttaaattacggacattataaaataattttttaaaaattgaattaacaatatgataaataatcaaataatacttcaaaaacacttaatttattttt 17474360  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||| | |||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||    
T  17474361 aaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 186 - 364
Target Start/End: Original strand, 21090129 - 21090312
Alignment:
Q  186 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaa 280  Q
    |||||| ||| ||| ||||||||| |||||||  ||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||||     |||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatatattatcatataatacttcaaaaacacttaatttattttaaaa 21090228  T
Q  281 agacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    | | |||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||    
T  21090229 aaatattttacattgttcataatttaaaaaataaaagtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 332
Target Start/End: Complemental strand, 48683848 - 48683647
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattc-cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 236  Q
    |||||||||||||  ||||||||||||||||||||| |||  ||  ||||||||| |||   ||||||||||||||||||||  |||||||||||||| |    
T  48683848 agggtgtgtttggatagagggtttaggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaac 48683749  T
Q  237 at-gatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 330  Q
    || ||| ||||||||| ||||| |||||||||||||||||||     |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  48683748 attgataaatgatcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaagaaataaaagtgagtcctcccct 48683649  T
Q  331 cc 332  Q
    ||    
T  48683648 cc 48683647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 205 - 367
Target Start/End: Complemental strand, 44412528 - 44412361
Alignment:
Q  205 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcg 299  Q
    |||||||||||||  ||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||     |||| |  ||||||||||||||    
T  44412528 taaaatgattttttgaaaattgaattaacaacatgataaatcatcatataatacttcaaaaacacttaatttattttaaaaaaatgttttacattgttcg 44412429  T
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||  |||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  44412428 taatttaaaaataaaaaatgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccct 44412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 183 - 367
Target Start/End: Complemental strand, 24253911 - 24253721
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| |||  ||||||||||||||| ||||| ||| ||||||||||| |||||| |||||| || ||| |||||||||||||||||||||         
T  24253911 cttttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgattatataacacttcaaaaacacttaatttatttta 24253812  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||   ||||||||||| || ||||||||||| ||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||    
T  24253811 aaaaattattttacattgctcataatttaaaaattaaaagtgaacactccccctccctttccctcctaaaccctcaatccaaacacaccct 24253721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 365
Target Start/End: Complemental strand, 42772250 - 42772046
Alignment:
Q  154 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 253  Q
    ||||||||||||||||| || |||| || ||| || || |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| |    
T  42772250 gagggtttaggaggggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatat 42772151  T
Q  254 aatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaa 353  Q
    ||||||||||||||||||||||||        ||||  |      ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  42772150 aatacttcaaaaacacttaattta-------tttttcaaaaaaaagtaatttaaaaaataaaagtgagtcctcccctcccttcccctcttaaaccttcaa 42772058  T
Q  354 tccaaacacacc 365  Q
    ||||||||||||    
T  42772057 tccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 362
Target Start/End: Complemental strand, 26136006 - 26135807
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    |||| |||||| |||| || ||||||||| |||  ||||||||||||| ||||||  |||||||||||||||  ||||| ||| || || ||||||||||    
T  26136006 ggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataaataattatataatacttca 26135907  T
Q  263 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 357  Q
    |||||||||||||||     |||| |||||||||||||||| ||||||||||||||||||||||      ||||||||| | ||||||||||||||||||    
T  26135906 aaaacacttaatttatttttaaaaaacattttacattgttcataatttaaaaaataaaagtgag-----tcctcccttctcttcctaaaccctcaatcca 26135812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 18086019 - 18086218
Alignment:
Q  167 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgat-caatgatcatgtaatacttcaaaa 265  Q
    ||||| |||||| || ||||||||| ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||  |||||||||  ||||||||||||    
T  18086019 gggagagcttacttttcttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataataaaatgatcataaaatacttcaaaa 18086118  T
Q  266 acacttaattt----------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 355  Q
    |||||||||||          ||||| ||| ||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||    
T  18086119 acacttaatttatttgagaaaaaaaaaacaatttacattgttagtaatttaaaaaataatagtgagccttaccctcccatcccctcataaaccctcaatc 18086218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 374
Target Start/End: Original strand, 27197734 - 27197900
Alignment:
Q  213 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 307  Q
    |||||| ||||||||||||||| ||||||  |||||||| |||||||| ||| | ||||||||||     |||| | || ||||||||||||||||||||    
T  27197734 tttttagaaaattgaattaacaacatgatagatgatcatataatactttaaatatacttaatttattttaaaaaaatatgttacattgttcgtaatttaa 27197833  T
Q  308 aaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtg 374  Q
    |||||||||||||| |||||  || ||||| ||| |||||| ||||| |||||||||||| ||||||    
T  27197834 aaaataaaagtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacacccttagagtg 27197900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 44412522 - 44412603
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||    
T  44412522 cattttacattgttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 326
Target Start/End: Original strand, 8432297 - 8432462
Alignment:
Q  164 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 263  Q
    ||||||||| ||||| ||  |||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||| ||  | |||||||||||    
T  8432297 gaggggaggacttacttt--tttttttaattacagacattataaaatgatttttacaaaattgaattaacaacatgataaataattttataatacttcaa 8432394  T
Q  264 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctc 326  Q
    ||||||||||     |||||||| ||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  8432395 aaacacttaattcattttaaaaaaacatttttcattgttcgtagtttaaaaattaaaattgaaccctc 8432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 46978594 - 46978462
Alignment:
Q  205 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcg 299  Q
    |||||||||||||| |||||| |||||||| |||||| |||||| || |||||||||||||||| ||||     |||||||| ||||||||||  |||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgataaatgattatataatacttcaaaaacatttaatttattttaaaaaaacattttacaccgttcg 46978495  T
Q  300 taatttaaaaaataaaagtgagccctcccctcc 332  Q
    ||||||||||| ||||||||| |||||||||||    
T  46978494 taatttaaaaattaaaagtgaaccctcccctcc 46978462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 185 - 332
Target Start/End: Original strand, 42699669 - 42699821
Alignment:
Q  185 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aa 279  Q
    ||||||| |||  ||||||||||||| | ||||| |||||||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||      |    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttcaaaaacacttaatttatttttta 42699768  T
Q  280 aagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 332  Q
    || | |||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  42699769 aaaatattttatattgttcgtaatttaaaaacaaaaagtgagtcctcccctcc 42699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 34641151 - 34641234
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| | ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  34641151 cattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 28582684 - 28582755
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  28582684 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccctaa 28582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 24560310 - 24560217
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||| |||| |||||| || |||||||||||||| ||||   | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  24560310 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 369
Target Start/End: Original strand, 5961933 - 5962014
Alignment:
Q  287 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||| ||||||| ||||| ||||||||| | || ||||||||||| ||||||||||||||| ||||||||||||||    
T  5961933 tttacattgtttgtaattttaaaaacaaaagtgagtcttcacctcccttccc-tcctaaaccctcaatacaaacacaccctaa 5962014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 24253883 - 24253968
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||| | ||| |||||||||||||| |||||| |  ||| |||||||||||||| |||||||||| |||||||||||||||||    
T  24253883 cattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccctaa 24253968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 274 - 369
Target Start/End: Original strand, 220548 - 220643
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| |   ||||||||||||| |||||||||||||| ||||||||| |||||||    
T  220548 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaa 220643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 24560393 - 24560466
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 372  Q
    ||||||||||||  |||||| | | ||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  24560393 gtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccctaagag 24560466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 36727349 - 36727242
Alignment:
Q  199 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---atttaaaaag-acattttacatt 294  Q
    |||||||||||| ||||| | |||||| | |||||| |||||| ||| ||||| ||||||||||||||||||||   |||| ||||| ||||||||||||    
T  36727349 acattataaaataattttaagaaaattaacttaacaacatgataaattatcatataatacttcaaaaacacttatttattttaaaagaacattttacatt 36727250  T
Q  295 gttcgtaa 302  Q
    ||| ||||    
T  36727249 gttagtaa 36727242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 55428554 - 55428619
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||| || |||||| |  | |||||||||||||||||||||||||||||||||||||||    
T  55428554 cgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 26135959 - 26136039
Alignment:
Q  285 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||| | ||| |||||||||||||| |||||| | |||||| ||||||||||||||||||||||| || ||| ||||||    
T  26135959 attttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacacc 26136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 373
Target Start/End: Original strand, 30200098 - 30200345
Alignment:
Q  138 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattga---attaaca 234  Q
    |||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| |||||||||| || |   |||||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaaca 30200197  T
Q  235 gcatgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 329  Q
      || | ||| |||||| || ||||| ||  |||||| |||||      ||| |||| ||| || || |||||||||||||| |||||| | |||| |||    
T  30200198 taataaacaacgatcatatagtactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccc 30200297  T
Q  330 tcccttcccctcctaaa----ccctcaatccaaacacaccctaagagt 373  Q
    ||||||||||||||| |    ||||||||||||||||||||| |||||    
T  30200298 tcccttcccctcctataccctccctcaatccaaacacacccttagagt 30200345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 27541998 - 27541937
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||||||||||  ||| |||| || || ||||||||||||||||||||||||||||||||||    
T  27541998 taatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 37102348 - 37102385
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccctaa 37102385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 41110496 - 41110565
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||||||||  |||||| | || ||| |||||||||||||  ||||||||||||||||||||||||    
T  41110496 cgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccct 41110565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 54574563 - 54574604
Alignment:
Q  330 tcccttcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  54574563 tcccttcccttcctaaaccctcaatccaaacacaccctaaga 54574604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 361
Target Start/End: Original strand, 54985696 - 54985943
Alignment:
Q  131 tttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatt 230  Q
    |||| |||| ||||||||||   |||||||||| ||| ||| |||||  || | ||||||| |||  ||||||||||| ||||||||| |||||||||||    
T  54985696 tttactaagagtgtgtttggattgagggtttagaaggagagagcttagttttcgtttttaaattacggacattataaattgatttttagaaaattgaatt 54985795  T
Q  231 aacagcatgat-------caatgatcatgtaatacttc-----aaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaata 313  Q
    ||||  |||||        ||||||||| |||||||||     ||||||||||||||||     |||  ||||||||||||  | ||||||||||||||     
T  54985796 aacaatatgataaatgaataatgatcatataatacttcaaaaaaaaaacacttaatttattttgaaagaacattttacattagttgtaatttaaaaaatt 54985895  T
Q  314 aaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 361  Q
    |||  ||   ||| | || |||||||| ||||||||||||||||||||    
T  54985896 aaaacgaattctctcatctcttccccttctaaaccctcaatccaaaca 54985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 18654802 - 18654842
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 21773851 - 21773776
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||||| |||| ||||||   |||| || ||||||||||||||||||| |||||||||||| ||||| |||||    
T  21773851 cgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacatacccttagagt 21773776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 41110390 - 41110323
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||  |||||| | || || ||||||||||||||||||| |||| |||||||||||||    
T  41110390 cgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 52474090 - 52474165
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    |||||||||||||  |||||| | |||||| |||||||||||||||||||||    |||||||||||| |||||||    
T  52474090 cgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaacccatcctccaaacacaccttaagagt 52474165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 5903603 - 5903549
Alignment:
Q  313 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||| | ||||||||| |||||||||| |||| ||||||||||||||||||||    
T  5903603 aaaagtaaaccctcccctgccttcccctcttaaatcctcaatccaaacacaccct 5903549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 9312516 - 9312470
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  9312516 ccctcccttcccctattaaaccctcaatccaaacataccctaagagt 9312470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 36568947 - 36568901
Alignment:
Q  324 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  36568947 ctcccctccattccactcctaaaccctccatccaaacacaccctaag 36568901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 6803377 - 6803442
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||| |||| | | | ||| |||| |||||||||||||||| |||||||||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 25655171 - 25655216
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||    
T  25655171 ccctcccctcccttctcctcttcaaccctcaatccaaacacaccct 25655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 28581254 - 28581189
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||  |||| | | |||||||||||||||| || |||||||||| ||||||||||||    
T  28581254 gtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaacacac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 55428553 - 55428492
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatact 259  Q
    ||||||| || |||||||||| ||||||||||||||| | |||| ||||||||| |||||||    
T  55428553 gacattacaagatgatttttagaaaattgaattaacaacgtgataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 651776 - 651740
Alignment:
Q  331 cccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||||||||||||||||||||||||||||||||    
T  651776 ccctccccctcctaaaccctcaatccaaacacaccct 651740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 8432321 - 8432261
Alignment:
Q  307 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||| |||||| || ||||||||| ||||||||| ||||||||| || ||||||||||||    
T  8432321 aaaaaaaaaagtaagtcctcccctctcttcccctcgtaaaccctccattcaaacacaccct 8432261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 9312673 - 9312713
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  9312673 ccctcccctcccctcctaaaccctcaatccaaacactccct 9312713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 25499074 - 25499146
Alignment:
Q  302 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtg 374  Q
    |||||||||| |||||| | |||| ||||| || |||||| ||||| ||| |||||||||| |||||||||||    
T  25499074 atttaaaaaagaaaagtaaacccttccctctctccccctcttaaactctccatccaaacaccccctaagagtg 25499146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 25655043 - 25654991
Alignment:
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaa 346  Q
    |||||||||| ||||||  |||||| | |||||||||||||||||||||||||    
T  25655043 tgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 30200130 - 30200094
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30200130 tcccctcctaaaccctccatccaaacacaccctaaga 30200094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  327 ccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 37102155 - 37102243
Alignment:
Q  134 attaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaa 222  Q
    |||||||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| ||||||||||    
T  37102155 attaagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaa 37102243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 42772231 - 42772275
Alignment:
Q  332 ccttcccctcctaaaccctcaatccaaacacaccctaagagtgtt 376  Q
    |||||||||||||||||||| || |||||||||||||||| ||||    
T  42772231 ccttcccctcctaaaccctccattcaaacacaccctaagaatgtt 42772275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    ||||||||||||| |||||| |    ||| ||||||||||||||||||| ||||||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 18654645 - 18654598
Alignment:
Q  322 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||| || ||| ||||||||||||||| |||||||||||||||||    
T  18654645 ccctcccatctctttccctcctaaaccctccatccaaacacaccctaa 18654598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 23028101 - 23028168
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||||||||  |||||| || ||| |||||  ||||||||| |||||||| |||||||||||||    
T  23028101 cgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 369
Target Start/End: Complemental strand, 46205015 - 46204884
Alignment:
Q  243 aatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcc 337  Q
    ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |||| |||||||||||| |||||| | | ||| | || ||||     
T  46205015 aatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacactctcatctcttct 46204916  T
Q  338 cctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||| |||||||||| ||||||||||| |||||    
T  46204915 cctgctaaaccctcgatccaaacacatcctaa 46204884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 10748333 - 10748299
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||||||||||||||||||||| |||||||||||    
T  10748333 ctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 48683816 - 48683850
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||||||| |||||||||||||||||    
T  48683816 tcccctcctaaaccctctatccaaacacaccctaa 48683850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 16275900 - 16275941
Alignment:
Q  328 cctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  16275900 cctcccctccccttccaaaccctcaatccaaacacaccctaa 16275941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 2387962 - 2387994
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||||||||||||||||||||||||    
T  2387962 tcccctcccaaaccctcaatccaaacacaccct 2387994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 12790417 - 12790377
Alignment:
Q  323 cctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    ||||| ||| ||||| |||||||||||||||||||||||||    
T  12790417 cctcctctctcttcctctcctaaaccctcaatccaaacaca 12790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 14897933 - 14897897
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  14897933 ctcccttcccctcctaaactctcaatccaaaaacacc 14897897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 16884041 - 16883974
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| |||||||| ||| || ||||||||||| ||||||||  ||||||||||  ||||||||||||||    
T  16884041 gtaaattaaaaaagaaatgtaagccctccccttccttcccc-actaaaccctctttccaaacacaccct 16883974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 27197721 - 27197677
Alignment:
Q  329 ctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  27197721 ctccctttccctcttaaaccctctatccaaacacatcctaagagt 27197677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 37102191 - 37102159
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||| |||||||||||||||    
T  37102191 tcccctcctaaaccctccatccaaacacaccct 37102159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 369
Target Start/End: Complemental strand, 41039984 - 41039948
Alignment:
Q  333 cttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||||| || |||||||||||||||||    
T  41039984 cttcccctcctaaaccttccatccaaacacaccctaa 41039948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 42699814 - 42699850
Alignment:
Q  335 tcccctcctaaaccctcaatccaaacacaccctaaga 371  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  42699814 tcccctcctaaaccctcgatccaaaaacaccctaaga 42699850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 52473984 - 52473920
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 362  Q
    |||||||||||||| |||| ||| | ||||| |  |||||||||| |||| ||||||||||||||    
T  52473984 cgtaatttaaaaaagaaaattgaactctcccatttcttcccctcccaaactctcaatccaaacac 52473920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 101; Significance: 6e-50; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 367
Target Start/End: Original strand, 1467 - 1642
Alignment:
Q  198 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaa------aaagacattttac 291  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||| |||||||| ||||| ||||||||||       ||| |||||||||    
T  1467 gacattatagaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttaaaaaatacttaatttatttaaagaaaaacattttac 1566  T
Q  292 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  1567 attgttcgtaatttaaaaaataaaagtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccct 1642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 1256 - 1175
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    |||| |||||| || |||||||||||||| |||||| | | |||||||| ||||||||||||||||||||||||||||||||    
T  1256 acatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 1461 - 1390
Alignment:
Q  303 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagtgt 375  Q
    ||||||||| |||||| || |||| | ||| ||| | |||||||||||||||||||||| | |||||||||||    
T  1461 tttaaaaaagaaaagtaagtcctctcatcctttctcttcctaaaccctcaatccaaacata-cctaagagtgt 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 183 - 367
Target Start/End: Complemental strand, 37572 - 37383
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 277  Q
    ||||||||| ||| ||||| ||||| |||||||||| |||| | |||||||| |||||| | ||||||| ||| ||||||||||||||| |||||         
T  37572 cttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatgataagtgatcatataacacttcaaaaacacttgatttatttta 37473  T
Q  278 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||| ||||||    
T  37472 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctcctaaatcctcaattcaaacgcaccct 37383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 245 - 367
Target Start/End: Complemental strand, 30843 - 30715
Alignment:
Q  245 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc 338  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  30843 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 30744  T
Q  339 ctcctaaaccctcaatccaaacacaccct 367  Q
    |||||||| ||||||||||||| ||||||    
T  30743 ctcctaaatcctcaatccaaacgcaccct 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 133 - 369
Target Start/End: Complemental strand, 53122 - 52894
Alignment:
Q  133 tattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 232  Q
    ||||||||||||||||||   ||||||||||||||  |  |  ||| || ||||||||| |||  | |||||| |||||||||||  ||||||||| |||    
T  53122 tattaagggtgtgtttggatggagggtttaggaggacaatg--tacttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaa 53025  T
Q  233 cagcatgatcaatgatcatgtaatacttcaaaaacactta----atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 328  Q
    || |||||| ||||||||| ||||| ||||||||||||||    ||||||||| | ||||||||||||| |||||||||||||||||||||||           
T  53024 caacatgataaatgatcatataatatttcaaaaacacttaatgtatttaaaaaaatattttacattgtttgtaatttaaaaaataaaagtgag------- 52932  T
Q  329 ctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
        |||||| ||||||||||||||||||||||||||||||    
T  52931 ---tcttcccatcctaaaccctcaatccaaacacaccctaa 52894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 370
Target Start/End: Complemental strand, 184796 - 184608
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca-aaaacacttaattt----- 276  Q
    ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||||  || ||||| |||||||||| ||||||||||||||         
T  184796 cttttttaaattatggacattataaaatgatttttttaaaattgaattaacaacatgatatattatcatataatacttcaaaaaacacttaatttattta 184697  T
Q  277 -----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 370  Q
         ||||| |||||||| || |||| ||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||    
T  184696 aaaaaaaaaaaacattttatatagttcataatttaaaaaataaaagtgaaccc----------tcccctcctaaaccctcaatccaaacacaccctaag 184608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  300 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 363  Q
    |||||||||||| || ||| | ||||||| |||||| ||||||||||||||| |||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 242425 - 242311
Alignment:
Q  163 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 262  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||| ||||    
T  242425 ggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattgaattaacgacatgataaatgatgatataataattca 242326  T
Q  263 aaaacacttaattta 277  Q
    |||| |||| |||||    
T  242325 aaaatacttcattta 242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 242377 - 242461
Alignment:
Q  284 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccta 368  Q
    ||||||| | ||| |||||||||||||| |||||| | |||||||||||||||||||  |||||| || ||||||||||| ||||    
T  242377 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacacagccta 242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 367
Target Start/End: Original strand, 39341 - 39434
Alignment:
Q  274 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| | |||||||||||||| |||| ||||||||||||||||||||||||||    
T  39341 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccct 39434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 39256 - 39184
Alignment:
Q  298 cgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    |||||||||||||  |||||| | |||||||| ||  |||||||||||||||||| |||||||||||||||||    
T  39256 cgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctccatccaaacacaccctaa 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 473 - 355
Alignment:
Q  201 attataaaatgatttttaaaaaattgaa-ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat------ttaaaaagacattttacat 293  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| ||  |||||||||||||||||||||      | ||||| ||||||||| |    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgataaatgataataaaatacttcaaaaacacttaattatttataaaaaaaacattttacgt 374  T
Q  294 tgttcgtaatttaaaaaat 312  Q
    |||||||||| ||||||||    
T  373 tgttcgtaatataaaaaat 355  T

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Target: scaffold0096 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 6652 - 6582
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 369  Q
    ||||||||||||| |||||| | ||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaa 6582  T

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Target: scaffold0198 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 3215 - 3150
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 364  Q
    ||||||||||||| |||||| | | |||||||||||||||||||||||| ||||||||||||||||    
T  3215 gtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 17729 - 17640
Alignment:
Q  183 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta 272  Q
    ||||||||| ||| | | |||||||||||||||||  |||||||||||| || |||||| ||| ||||| |||||||||||| |||||||    
T  17729 cttttttaaattacaaatattataaaatgattttttgaaaattgaattagcaacatgataaataatcatataatacttcaaatacactta 17640  T

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Target: scaffold0240; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 17716 - 17788
Alignment:
Q  299 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagt 373  Q
    ||||||||||||| |||||| | |||  ||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  17716 gtaatttaaaaaagaaaagtaaaccc--ccctcccttccactcctaaaccctccatccaaacacacccttagagt 17788  T

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Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 16369 - 16296
Alignment:
Q  294 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 367  Q
    ||||| |||||||||||  |||||| | ||||||||||| || ||||||||||||||| ||||||||| |||||    
T  16369 tgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccct 16296  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 122068 - 121987
Alignment:
Q  283 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 365  Q
    |||||||| | |||||||||||| ||||| |||||  |  ||||||||| || |  |||||||||||||||||||||||||||    
T  122068 acattttataatgttcgtaattttaaaaagaaaagcaaatcctcccctctct-cttctcctaaaccctcaatccaaacacacc 121987  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 81498 - 81546
Alignment:
Q  215 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 263  Q
    |||||||||||||| ||| | |||||| ||||||||| |||||||||||    
T  81498 tttaaaaaattgaaataataacatgataaatgatcatataatacttcaa 81546  T

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