View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2898_low_21 (Length: 394)

Name: NF2898_low_21
Description: NF2898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2898_low_21
NF2898_low_21
[»] chr8 (34 HSPs)
chr8 (224-394)||(9796729-9796898)
chr8 (224-394)||(599535-599704)
chr8 (224-394)||(28254800-28254969)
chr8 (219-394)||(35427186-35427360)
chr8 (219-391)||(41260638-41260809)
chr8 (224-394)||(7910990-7911159)
chr8 (220-390)||(18428139-18428309)
chr8 (226-394)||(18049595-18049763)
chr8 (222-394)||(18049965-18050136)
chr8 (224-394)||(9797100-9797270)
chr8 (224-393)||(35693871-35694041)
chr8 (218-394)||(34799457-34799632)
chr8 (224-391)||(42035775-42035941)
chr8 (224-394)||(28254428-28254598)
chr8 (219-393)||(15256203-15256379)
chr8 (219-394)||(34799077-34799252)
chr8 (219-394)||(42036145-42036320)
chr8 (219-394)||(16578470-16578644)
chr8 (217-391)||(599875-600048)
chr8 (219-391)||(6115487-6115659)
chr8 (219-360)||(15255851-15255991)
chr8 (224-394)||(5731186-5731355)
chr8 (219-390)||(16578106-16578277)
chr8 (219-394)||(26252809-26252981)
chr8 (224-394)||(2208717-2208887)
chr8 (221-394)||(35694244-35694424)
chr8 (224-391)||(7910619-7910786)
chr8 (326-391)||(35426917-35426982)
chr8 (219-384)||(5730815-5730979)
chr8 (339-394)||(35163815-35163870)
chr8 (224-354)||(41260274-41260403)
chr8 (220-297)||(28877359-28877436)
chr8 (219-266)||(35426840-35426887)
chr8 (224-314)||(18674151-18674241)
[»] chr2 (49 HSPs)
chr2 (225-394)||(16175723-16175892)
chr2 (219-394)||(38007948-38008123)
chr2 (219-390)||(15550671-15550842)
chr2 (217-394)||(11540012-11540188)
chr2 (224-394)||(42192616-42192786)
chr2 (224-394)||(4355758-4355927)
chr2 (224-394)||(33920615-33920784)
chr2 (219-394)||(20128111-20128285)
chr2 (224-394)||(4808882-4809051)
chr2 (218-394)||(44219641-44219816)
chr2 (224-394)||(6949454-6949624)
chr2 (224-394)||(11539640-11539810)
chr2 (224-391)||(42192243-42192409)
chr2 (224-390)||(16953312-16953477)
chr2 (224-394)||(38008325-38008494)
chr2 (219-394)||(13315491-13315669)
chr2 (219-394)||(33920985-33921160)
chr2 (219-394)||(43160007-43160182)
chr2 (219-394)||(62955-63129)
chr2 (219-394)||(4356130-4356304)
chr2 (224-394)||(43216083-43216252)
chr2 (222-394)||(9330168-9330340)
chr2 (224-394)||(32418162-32418329)
chr2 (224-394)||(20127739-20127909)
chr2 (219-391)||(15551051-15551223)
chr2 (224-390)||(43160388-43160554)
chr2 (253-390)||(13399454-13399590)
chr2 (246-394)||(13399794-13399940)
chr2 (224-394)||(16952938-16953109)
chr2 (224-394)||(17060909-17061080)
chr2 (224-394)||(649530-649698)
chr2 (224-394)||(44220017-44220188)
chr2 (223-394)||(5560924-5561084)
chr2 (219-383)||(24140064-24140222)
chr2 (217-394)||(63332-63514)
chr2 (219-394)||(25335981-25336148)
chr2 (224-394)||(4809253-4809422)
chr2 (322-394)||(43215809-43215881)
chr2 (219-364)||(32418550-32418694)
chr2 (224-313)||(6949898-6949987)
chr2 (224-380)||(31797166-31797320)
chr2 (224-313)||(5560054-5560143)
chr2 (219-307)||(20495191-20495279)
chr2 (323-394)||(22445741-22445812)
chr2 (326-384)||(9329985-9330043)
chr2 (219-382)||(28143416-28143577)
chr2 (224-308)||(649796-649880)
chr2 (246-311)||(2190532-2190597)
chr2 (220-296)||(3824179-3824255)
[»] chr5 (30 HSPs)
chr5 (224-394)||(28289687-28289856)
chr5 (219-394)||(18150097-18150272)
chr5 (219-391)||(15115472-15115640)
chr5 (225-394)||(38900648-38900814)
chr5 (218-390)||(28290022-28290193)
chr5 (224-394)||(19291359-19291529)
chr5 (219-394)||(21371070-21371244)
chr5 (217-394)||(15029683-15029859)
chr5 (219-391)||(4967146-4967319)
chr5 (224-394)||(32697597-32697769)
chr5 (224-394)||(8418995-8419163)
chr5 (223-394)||(4966818-4966987)
chr5 (223-390)||(14340785-14340954)
chr5 (218-360)||(18149730-18149871)
chr5 (224-314)||(5162022-5162112)
chr5 (224-390)||(38901020-38901183)
chr5 (224-387)||(39083362-39083525)
chr5 (271-394)||(5161632-5161755)
chr5 (219-382)||(16752580-16752741)
chr5 (247-394)||(22651371-22651517)
chr5 (322-391)||(14340480-14340549)
chr5 (353-394)||(22651719-22651760)
chr5 (218-307)||(17260680-17260769)
chr5 (345-394)||(32697458-32697507)
chr5 (326-394)||(21370798-21370868)
chr5 (345-382)||(2864878-2864915)
chr5 (345-382)||(8647822-8647859)
chr5 (217-298)||(14340394-14340475)
chr5 (341-382)||(27307179-27307220)
chr5 (219-307)||(22651771-22651859)
[»] chr3 (61 HSPs)
chr3 (217-394)||(40838648-40838824)
chr3 (224-394)||(46013425-46013594)
chr3 (217-394)||(47431692-47431869)
chr3 (220-394)||(51473229-51473403)
chr3 (217-394)||(41998225-41998402)
chr3 (219-394)||(49720369-49720543)
chr3 (224-390)||(51828542-51828708)
chr3 (224-394)||(49951920-49952089)
chr3 (219-391)||(52375708-52375879)
chr3 (221-388)||(40839032-40839198)
chr3 (224-391)||(52237194-52237360)
chr3 (224-394)||(40275468-40275636)
chr3 (224-394)||(51472858-51473027)
chr3 (224-394)||(51827960-51828129)
chr3 (225-394)||(55389609-55389777)
chr3 (220-391)||(49951545-49951715)
chr3 (224-394)||(43678298-43678467)
chr3 (224-386)||(44676475-44676636)
chr3 (224-394)||(52236819-52236988)
chr3 (246-394)||(2044296-2044443)
chr3 (224-394)||(25534893-25535063)
chr3 (224-394)||(51828331-51828501)
chr3 (224-394)||(330210-330379)
chr3 (220-394)||(44676846-44677019)
chr3 (224-391)||(40275096-40275264)
chr3 (224-394)||(30513725-30513894)
chr3 (219-394)||(32730387-32730561)
chr3 (224-394)||(46013796-46013966)
chr3 (224-394)||(43678658-43678827)
chr3 (224-394)||(50662786-50662955)
chr3 (224-389)||(16701168-16701335)
chr3 (227-394)||(34105022-34105190)
chr3 (219-391)||(38535672-38535843)
chr3 (224-390)||(14654569-14654732)
chr3 (219-390)||(38535307-38535477)
chr3 (224-391)||(39010078-39010243)
chr3 (224-391)||(52375330-52375496)
chr3 (219-394)||(55389971-55390145)
chr3 (219-394)||(2051293-2051471)
chr3 (247-394)||(51828914-51829060)
chr3 (224-394)||(32730763-32730932)
chr3 (223-383)||(22370598-22370758)
chr3 (219-392)||(14654197-14654361)
chr3 (217-314)||(16689354-16689451)
chr3 (227-394)||(34104644-34104809)
chr3 (224-356)||(49720773-49720904)
chr3 (225-360)||(329850-329984)
chr3 (224-298)||(41998697-41998771)
chr3 (224-392)||(43222765-43222933)
chr3 (224-307)||(36701109-36701192)
chr3 (224-382)||(36701482-36701639)
chr3 (217-296)||(27199698-27199777)
chr3 (219-382)||(49407794-49407955)
chr3 (246-291)||(40490747-40490792)
chr3 (349-394)||(43222517-43222562)
chr3 (246-306)||(39010482-39010542)
chr3 (221-314)||(8874139-8874232)
chr3 (245-314)||(43222414-43222483)
chr3 (341-382)||(55192236-55192277)
chr3 (322-382)||(27200078-27200137)
chr3 (219-291)||(27200167-27200239)
[»] chr7 (45 HSPs)
chr7 (224-394)||(786785-786955)
chr7 (224-391)||(16081676-16081842)
chr7 (224-394)||(9181783-9181955)
chr7 (222-394)||(28687873-28688043)
chr7 (219-394)||(7732486-7732660)
chr7 (222-391)||(26026318-26026487)
chr7 (224-394)||(27245206-27245376)
chr7 (224-394)||(26048321-26048489)
chr7 (217-394)||(25637572-25637748)
chr7 (219-394)||(48247585-48247763)
chr7 (227-394)||(35161175-35161342)
chr7 (219-394)||(48247965-48248140)
chr7 (224-394)||(9181535-9181704)
chr7 (219-394)||(25637195-25637370)
chr7 (223-394)||(5745641-5745811)
chr7 (224-391)||(39388643-39388811)
chr7 (224-394)||(5746013-5746183)
chr7 (224-394)||(24929677-24929851)
chr7 (246-394)||(27245578-27245725)
chr7 (224-394)||(7732861-7733030)
chr7 (246-394)||(14311340-14311488)
chr7 (222-394)||(11973776-11973947)
chr7 (224-391)||(15712368-15712534)
chr7 (219-394)||(26026692-26026866)
chr7 (224-394)||(14311661-14311830)
chr7 (217-356)||(5333876-5334014)
chr7 (224-391)||(16081302-16081468)
chr7 (224-391)||(2758075-2758241)
chr7 (224-394)||(26047960-26048120)
chr7 (224-392)||(34595148-34595315)
chr7 (224-394)||(11971337-11971510)
chr7 (218-391)||(787159-787335)
chr7 (219-314)||(16917711-16917806)
chr7 (224-313)||(5334273-5334362)
chr7 (221-286)||(40669689-40669754)
chr7 (224-379)||(28687596-28687750)
chr7 (224-307)||(4477705-4477788)
chr7 (326-394)||(35160906-35160973)
chr7 (322-384)||(33880969-33881030)
chr7 (217-269)||(5184424-5184476)
chr7 (326-374)||(5184498-5184546)
chr7 (219-307)||(39136684-39136772)
chr7 (224-307)||(39136993-39137076)
chr7 (322-382)||(9394117-9394176)
chr7 (224-288)||(35579364-35579428)
[»] chr4 (55 HSPs)
chr4 (224-394)||(28465084-28465253)
chr4 (219-394)||(34807114-34807289)
chr4 (224-394)||(34789756-34789926)
chr4 (219-394)||(46737029-46737203)
chr4 (217-385)||(19528865-19529033)
chr4 (224-394)||(21034238-21034408)
chr4 (219-394)||(33689827-33690000)
chr4 (222-394)||(14439829-14440000)
chr4 (224-394)||(24851839-24852009)
chr4 (220-394)||(36168328-36168504)
chr4 (219-391)||(12593400-12593571)
chr4 (224-394)||(55677331-55677501)
chr4 (224-394)||(14440202-14440371)
chr4 (224-394)||(54440574-54440741)
chr4 (221-394)||(41608374-41608547)
chr4 (224-394)||(21034610-21034780)
chr4 (224-390)||(26974286-26974452)
chr4 (224-394)||(12593027-12593196)
chr4 (224-394)||(28465455-28465624)
chr4 (224-394)||(34789385-34789554)
chr4 (224-394)||(56077698-56077867)
chr4 (220-394)||(41114156-41114331)
chr4 (219-394)||(45838545-45838719)
chr4 (220-391)||(45838924-45839096)
chr4 (224-394)||(54440943-54441112)
chr4 (247-391)||(34807516-34807659)
chr4 (220-394)||(6616671-6616845)
chr4 (219-394)||(36168705-36168879)
chr4 (322-394)||(35643667-35643739)
chr4 (322-394)||(24851565-24851637)
chr4 (219-390)||(19529071-19529242)
chr4 (217-394)||(28166000-28166176)
chr4 (222-394)||(16214869-16215040)
chr4 (221-356)||(6617074-6617208)
chr4 (247-391)||(46736681-46736824)
chr4 (324-391)||(18965513-18965580)
chr4 (219-314)||(33777630-33777725)
chr4 (219-312)||(41608870-41608963)
chr4 (218-394)||(229158-229333)
chr4 (224-287)||(35644042-35644105)
chr4 (224-360)||(33778020-33778155)
chr4 (220-394)||(229533-229706)
chr4 (224-350)||(26974662-26974788)
chr4 (217-312)||(24851312-24851407)
chr4 (246-382)||(35193333-35193467)
chr4 (219-296)||(24335759-24335836)
chr4 (246-314)||(35643580-35643648)
chr4 (224-288)||(51641309-51641373)
chr4 (224-307)||(1397598-1397681)
chr4 (221-296)||(40160561-40160636)
chr4 (324-381)||(24335864-24335920)
chr4 (248-313)||(30597973-30598038)
chr4 (246-314)||(17504412-17504480)
chr4 (224-296)||(23986523-23986595)
chr4 (224-296)||(24336234-24336306)
[»] chr6 (21 HSPs)
chr6 (224-394)||(31073516-31073685)
chr6 (224-394)||(25472386-25472556)
chr6 (219-389)||(5120848-5121017)
chr6 (224-394)||(31574099-31574268)
chr6 (219-394)||(25468847-25469023)
chr6 (218-394)||(29891077-29891252)
chr6 (219-394)||(30251065-30251240)
chr6 (224-394)||(5114471-5114640)
chr6 (223-394)||(24640559-24640729)
chr6 (322-394)||(28636570-28636642)
chr6 (322-394)||(29891454-29891526)
chr6 (322-394)||(31573825-31573897)
chr6 (247-366)||(28636318-28636435)
chr6 (339-387)||(30250808-30250856)
chr6 (219-291)||(31242804-31242876)
chr6 (224-296)||(32836467-32836539)
chr6 (219-296)||(32836005-32836082)
chr6 (345-382)||(12935281-12935318)
chr6 (224-269)||(30250724-30250769)
chr6 (343-391)||(11523806-11523854)
chr6 (322-362)||(31073250-31073290)
[»] chr1 (53 HSPs)
chr1 (217-394)||(1837501-1837677)
chr1 (219-394)||(37421158-37421334)
chr1 (224-394)||(10278551-10278721)
chr1 (224-394)||(34555754-34555925)
chr1 (220-394)||(21938562-21938735)
chr1 (224-394)||(44954600-44954769)
chr1 (224-391)||(30786774-30786941)
chr1 (224-394)||(443925-444094)
chr1 (224-394)||(44582060-44582229)
chr1 (226-390)||(4080026-4080189)
chr1 (218-394)||(8230015-8230190)
chr1 (224-391)||(2868085-2868251)
chr1 (223-394)||(17641738-17641913)
chr1 (246-391)||(52335887-52336031)
chr1 (219-388)||(8229635-8229806)
chr1 (247-394)||(37505442-37505587)
chr1 (224-391)||(44954229-44954395)
chr1 (224-391)||(23340186-23340352)
chr1 (224-394)||(29438933-29439103)
chr1 (246-388)||(2867936-2868077)
chr1 (224-394)||(16298685-16298854)
chr1 (219-391)||(34555377-34555550)
chr1 (224-391)||(10278927-10279090)
chr1 (224-386)||(37505070-37505232)
chr1 (219-394)||(9992152-9992327)
chr1 (322-394)||(1744427-1744499)
chr1 (219-394)||(29021238-29021413)
chr1 (224-394)||(44582431-44582602)
chr1 (221-388)||(50305162-50305331)
chr1 (224-390)||(9992533-9992698)
chr1 (219-394)||(16299056-16299229)
chr1 (222-394)||(6224698-6224871)
chr1 (324-394)||(17641467-17641537)
chr1 (224-298)||(50304442-50304516)
chr1 (326-394)||(30787146-30787214)
chr1 (322-394)||(50304882-50304954)
chr1 (218-382)||(45048152-45048314)
chr1 (219-382)||(39485063-39485224)
chr1 (219-314)||(30787251-30787346)
chr1 (224-394)||(50926233-50926404)
chr1 (228-302)||(23526665-23526739)
chr1 (232-394)||(9833526-9833687)
chr1 (246-314)||(29439375-29439443)
chr1 (221-314)||(37421397-37421491)
chr1 (340-394)||(50926615-50926669)
chr1 (219-296)||(45048606-45048683)
chr1 (219-307)||(44802631-44802719)
chr1 (340-379)||(23526776-23526815)
chr1 (217-272)||(52235163-52235218)
chr1 (277-311)||(29020936-29020970)
chr1 (220-298)||(44291780-44291858)
chr1 (365-394)||(29439305-29439334)
chr1 (224-296)||(23527001-23527073)
[»] scaffold0097 (2 HSPs)
scaffold0097 (224-394)||(46269-46439)
scaffold0097 (219-394)||(46641-46816)
[»] scaffold0712 (2 HSPs)
scaffold0712 (220-391)||(6768-6943)
scaffold0712 (224-391)||(6395-6561)
[»] scaffold0709 (2 HSPs)
scaffold0709 (220-391)||(6786-6961)
scaffold0709 (224-391)||(6413-6579)
[»] scaffold0025 (1 HSPs)
scaffold0025 (322-394)||(78417-78489)
[»] scaffold0007 (3 HSPs)
scaffold0007 (224-382)||(205754-205910)
scaffold0007 (224-296)||(210808-210880)
scaffold0007 (219-264)||(205356-205401)
[»] scaffold1432 (1 HSPs)
scaffold1432 (219-296)||(536-613)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 9796729 - 9796898
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||| |||| ||||||       ||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgtttttt-gc 9796827  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9796828 agttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 9796898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 599535 - 599704
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||       ||    
T  599535 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatg-ttttttgc 599633  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  599634 agttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 28254969 - 28254800
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| |||||        ||    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-aatttttgc 28254871  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28254870 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 35427360 - 35427186
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || |  ||||||||||||| |||| |||||| ||| ||||||||||         
T  35427360 taggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat-attt 35427262  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35427261 tttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 35427186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 41260809 - 41260638
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| ||||||  || || |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||        
T  41260809 taggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttt 41260711  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       |||||||||||| ||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  41260710 tttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccac 41260638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 7911159 - 7910990
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||  ||||||||||||||||||||| || |  |||||||||||||||||| |||||| ||| |||| |||||        ||    
T  7911159 ttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat-attttttgc 7911061  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7911060 agttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccaccta 7910990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 390
Target Start/End: Complemental strand, 18428309 - 18428139
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||         
T  18428309 aggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 18428210  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
      ||||||||| || ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18428209 ttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacca 18428139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 226 - 394
Target Start/End: Original strand, 18049595 - 18049763
Alignment:
Q  226 aattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcag 325  Q
    ||||||||||||  ||||  ||||||||||||||||||||| || |  || || |||||||||||| |||||| |||||||| ||||||       ||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcag 18049694  T
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  18049695 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccaccta 18049763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 222 - 394
Target Start/End: Complemental strand, 18050136 - 18049965
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||           
T  18050136 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttt 18050038  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    || |||||| || ||| ||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||    
T  18050037 gctgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccaccta 18049965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 9797270 - 9797100
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || |  || || ||||||||| ||||||||| |||||||| ||||||       ||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgc 9797171  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9797170 agttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccaccta 9797100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 393
Target Start/End: Original strand, 35693871 - 35694041
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng- 322  Q
    |||||||||||||| |||||| |||||||||||| | |||||| ||||  ||||||||||||||||||||||||| ||| |||| |||||              
T  35693871 ttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttttt 35693970  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacct 393  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  35693971 cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacct 35694041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 394
Target Start/End: Complemental strand, 34799632 - 34799457
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||| ||||||||||||||  ||||| |||||||||||| | ||||||||| || |||||||||||||||||| |||||  ||| |||| ||||||       
T  34799632 ataggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttt 34799533  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||| | |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  34799532 ttt-gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccaccta 34799457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 42035775 - 42035941
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || |  |||||||||||||||||| |||||| ||| |||| |||||        ||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat-atattttgc 42035873  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    | |||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42035874 aattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccac 42035941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 28254428 - 28254598
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||| |||||||||||| || || || || |||||||| ||| |||||| |||||||| ||||||       ||    
T  28254428 ttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgc 28254527  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  28254528 agttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccaccta 28254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 393
Target Start/End: Complemental strand, 15256379 - 15256203
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  |||||||||||||||| |||| || || || || |||||||||||| |||||| |||||||| ||||||        
T  15256379 taggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 15256280  T
Q  319 nnn--gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacct 393  Q
         |||||| ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  15256279 tttttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 34799077 - 34799252
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  || |  |||||||||||||||| |||| || || ||  | |||||||||||| ||| || |||||||| ||||||        
T  34799077 taggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttt 34799176  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  34799177 tttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccaccta 34799252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 42036320 - 42036145
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| |||||| ||| |  |||||||||||||| |||||| ||||| |||||||||||||||||| |||||| ||| |||| ||||||        
T  42036320 taggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 42036221  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| |||   | |||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  42036220 tttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtccaaccaccta 42036145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 16578644 - 16578470
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||| ||||||||||| || | ||| || ||| |||||||| ||||||||| ||||| ||||||        
T  16578644 taggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgtttt 16578545  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  16578544 tt-gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccaccta 16578470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 217 - 391
Target Start/End: Complemental strand, 600048 - 599875
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||  |||||||||||||| |||||| || ||||| || |||||||| ||| |||||| |||||||| ||||||      
T  600048 aataggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgtt 599949  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
         |||||||||||| ||| || |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  599948 tttt-gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccac 599875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 6115659 - 6115487
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| ||||||  |||||  |||||||||||||| |||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  6115659 taggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 6115560  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       | |||||||||  ||| ||| ||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  6115559 tttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccac 6115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 360
Target Start/End: Original strand, 15255851 - 15255991
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  15255851 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttt 15255949  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaa 360  Q
       |||||||||||| ||| ||||||||||||||||||||||    
T  15255950 tttgcagttttagtcctatctccctatttccaactccataaa 15255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 5731355 - 5731186
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| ||||||| || || |||||||||||||||| ||||||| |  ||||| || ||||||||| |||||| ||| |||| ||||||       ||    
T  5731355 ttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgtttttt-gc 5731257  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||  ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  5731256 agttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 5731186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 390
Target Start/End: Original strand, 16578106 - 16578277
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||| ||||  | ||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||||||||||        
T  16578106 taggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttt 16578204  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgc-acagaaatgacagttttagtccaacca 390  Q
       |||||||| ||| ||| |||||||||||||||||| |||||| | | |||  ||||||||||||||||||    
T  16578205 tttgcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaacca 16578277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 26252809 - 26252981
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| ||| || ||||  ||| || ||||||||||| | | | ||||||||||||||| |||||| ||| |||| ||||||        
T  26252809 taggcttaattacacttttgatctttgcatt--gactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 26252906  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  26252907 gt-gcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtccaaccaccta 26252981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 2208717 - 2208887
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||  ||||||||||||||||||||| |  || || || |||||||||||| |||||| |||||||| |||||         |    
T  2208717 ttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttac 2208816  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||||||| ||||||||| ||| |||| ||||| |||||||| | ||||||||||||||||||||    
T  2208817 aattttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccaccta 2208887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 394
Target Start/End: Complemental strand, 35694424 - 35694244
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnn 320  Q
    |||||||||||||||||  ||||| ||||||||| ||||||| ||| || || ||| | |||||||||||| |||||| |||||||| |||||           
T  35694424 ggtttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatatttttttt 35694325  T
Q  321 n-------gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
            || ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  35694324 ttttttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 35694244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 7910619 - 7910786
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  |||| ||||||||| |||||||||||| || | ||||||||||||||||||| |||||| ||| |||||||||||       ||    
T  7910619 ttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttgc 7910717  T
Q  324 agttttagtcatatatccc--tatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    || ||||||| |||||| |  |||||| ||||| | ||| ||||||||||||||||||||||| ||||||    
T  7910718 ag-tttagtcctatatctctttatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccac 7910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 35426917 - 35426982
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccac 35426982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 384
Target Start/End: Original strand, 5730815 - 5730979
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| |  || || || ||||||||| || |||||| |||||||| ||||||        
T  5730815 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg-ttt 5730913  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtc 384  Q
       || ||||||||| ||  |||||||||  ||||||| ||||| |||||||||||||||||||||    
T  5730914 tttgctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 35163815 - 35163870
Alignment:
Q  339 tccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccaccta 35163870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 41260274 - 41260403
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||||||||||| |||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  41260274 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 41260372  T
Q  324 agttttagtcatatatccctatttccaactc 354  Q
    |||||||||| ||| ||||||||||||||||    
T  41260373 agttttagtcttatctccctatttccaactc 41260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 28877436 - 28877359
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaat 297  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||| || | |||||||||| |||| ||| |||||    
T  28877436 aggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaat 28877359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 35426840 - 35426887
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaa 266  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||    
T  35426840 taggtttaattacacttttagtcctaccattttgaccaactcacgaaa 35426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 18674151 - 18674241
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    ||||||||||| ||  ||||| || ||||||||| ||||||||||| |  | || ||||||||||||| |||||| ||| |||| ||||||    
T  18674151 ttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 225 - 394
Target Start/End: Complemental strand, 16175892 - 16175723
Alignment:
Q  225 taattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngca 324  Q
    |||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||||       |||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  325 gttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16175792 gttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 16175723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 38007948 - 38008123
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  38007948 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 38008047  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  38008048 tttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgccta 38008123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 219 - 390
Target Start/End: Original strand, 15550671 - 15550842
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  15550671 taggtttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 15550770  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
       |||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  15550771 tttgcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 217 - 394
Target Start/End: Complemental strand, 11540188 - 11540012
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||| ||||||  || |  ||||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||| ||||||      
T  11540188 aataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgtt 11540089  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11540088 tttt-gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 11540012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 42192786 - 42192616
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||| || |||       ||    
T  42192786 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttttgc 42192687  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42192686 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 42192616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 4355758 - 4355927
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 4355856  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  4355857 agttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 4355927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 33920615 - 33920784
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-atttttgc 33920713  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccaccta 33920784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 20128285 - 20128111
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||| ||||||||||||||||| || ||||||||||||||| || |||||| |||||||| ||||||        
T  20128285 taggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgtttt 20128186  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||| |||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  20128185 tt-gcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 20128111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 4808882 - 4809051
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  | ||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| ||||||       |     
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt-gt 4808980  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 4809051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 218 - 394
Target Start/End: Original strand, 44219641 - 44219816
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||| ||||||||||||||  ||||| |||||||| |||||||| ||| ||||| ||||| |||||||||||| |||||  |||||||||||||||       
T  44219641 ataggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgttt 44219740  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  44219741 ttt-gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcaccta 44219816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 6949454 - 6949624
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||  ||||||||| ||||||||||| || || || || |||||||||||| |||||| ||||| || ||||||       ||    
T  6949454 ttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttttgc 6949553  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6949554 agttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 6949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 11539640 - 11539810
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || ||  | |||||||||||| |||||| |||||||| ||||||       ||    
T  11539640 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 11539739  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  11539740 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 11539810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 42192243 - 42192409
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 42192341  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  42192342 agttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccac 42192409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 16953477 - 16953312
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||| || |||||||||||||||||| ||||   ||| |||| ||||||       ||    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgtttttt-gc 16953379  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16953378 agttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacca 16953312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 38008494 - 38008325
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  38008494 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 38008396  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  38008395 agttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccaccta 38008325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 13315491 - 13315669
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg--nn 316  Q
    |||||||||||||||||||| ||||  |||||||||||||||| |||| || ||||| || |||||||||||| |||||| |||||||| ||||||        
T  13315491 taggtttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 13315590  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactcca-taaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  13315591 tttttgcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccaccta 13315669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 33921160 - 33920985
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| || ||||| || |||        
T  33921160 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttt 33921061  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33921060 tttgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccaccta 33920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 43160007 - 43160182
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||| ||||  ||||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||          
T  43160007 taggattaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttt 43160106  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||    
T  43160107 tttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccaccta 43160182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 62955 - 63129
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||| |  ||||| ||||||||||||||||||||| || || ||||| ||| |||||||| |||||| |||||||| ||||||        
T  62955 taggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgtttt 63054  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  63055 tt-gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccaccta 63129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 4356304 - 4356130
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||| | || ||||| || |||||||||||| |||||| |||||||| ||||||        
T  4356304 taggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 4356205  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||||||||| |  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4356204 tt-gcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 4356130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 43216252 - 43216083
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| | |||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| |||||        ||    
T  43216252 ttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-attttttgc 43216154  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| || ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  43216153 agttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccaccta 43216083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 394
Target Start/End: Complemental strand, 9330340 - 9330168
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||  ||| ||||||           
T  9330340 gtttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgttttttt 9330241  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| | ||||||| |||||  | |||| || |||||||||||||||||||||||||||||    
T  9330240 gcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccaccta 9330168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 32418162 - 32418329
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||| || |||||||||  ||||||| |||||| ||| |||| |||||        ||    
T  32418162 ttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat-attttttgc 32418258  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32418259 agttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccaccta 32418329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 20127739 - 20127909
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||||||| |||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  20127739 ttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 20127838  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||    
T  20127839 agttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccaccta 20127909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 15551223 - 15551051
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||||||||||||||||||   |||  ||||||||||||||||| ||| || |||||  | |||||||||||| |||||| ||||||| |||||||        
T  15551223 taggtttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttt 15551124  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       |||||||||||| ||| |||||||||||||||||| ||||||||| |||| | |||||||||||||||||    
T  15551123 tttgcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccac 15551051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 43160554 - 43160388
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||   ||||  ||||||||| ||||||||||| || || || || ||||||||||||  ||||| |||||||| ||||||       ||    
T  43160554 ttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttttgc 43160455  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  43160454 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaacca 43160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 390
Target Start/End: Original strand, 13399454 - 13399590
Alignment:
Q  253 accaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatttccaac 352  Q
    ||||| ||||||||||| ||||||||||||||||| ||| |||||| ||| |||| ||||||       |||||||||||| ||| ||||||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttccaac 13399552  T
Q  353 tccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  13399553 tccagaaacgcacagaaatgacagttttagtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 394
Target Start/End: Complemental strand, 13399940 - 13399794
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    ||||||||||||||||||||| || || ||  |||||||||||||| |||||  |||||||| |||||        |||||||||||||||| |||||||    
T  13399940 cattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatat-attttttgcagttttagtcatatctccctat 13399843  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13399842 ttccaactccataaacgcatagaaatgacagttttaatccaaccaccta 13399794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 16952938 - 16953109
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    ||||||| ||||||  ||||  ||||||||||||||||||||| |  || || || |||||||||||| |||||| |||||||| ||||||        |    
T  16952938 ttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 16953037  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  16953038 cggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactaccta 16953109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 17060909 - 17061080
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    ||||||| ||||||  ||||  ||||||||||||||||||||| |  || || || |||||||||||| |||||| |||||||| ||||||        |    
T  17060909 ttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 17061008  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  17061009 cggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactaccta 17061080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 649530 - 649698
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||| |||||||||| ||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  649530 ttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 649628  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||  | | |||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||    
T  649629 agttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccaccta 649698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 44220188 - 44220017
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||| ||||  ||||||||||||||||||||| || |||||||| ||||||||| || |||||| ||| |||| ||||||       |     
T  44220188 ttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg-ttttttgt 44220090  T
Q  324 agttttagtcatatat--ccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |  ||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||    
T  44220089 agttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccaccta 44220017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 394
Target Start/End: Complemental strand, 5561084 - 5560924
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    ||||||||| |||||  ||||| |||||| || ||||||||||||||||| ||||||||||||||||          ||| |||| ||||||       |    
T  5561084 tttaattacccttttggtccttgcattttaactaactcacgaaattgatcctacctcttttaaatcg----------tccctaaactatatgtttttt-g 5560996  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5560995 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 5560924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 383
Target Start/End: Complemental strand, 24140222 - 24140064
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||| ||||||||||||||||| || || ||||| ||||||||| || |||||| ||| |||| |||||         
T  24140222 taggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat----- 24140128  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagt 383  Q
       |||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  24140127 -ttgcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 394
Target Start/End: Complemental strand, 63514 - 63332
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||||||||||| | ||||  |||||  |||||||||||||||||||| || || || |||||||||||| || |||||| ||| |||| ||||||      
T  63514 aataggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgtt 63415  T
Q  317 nnnnn-----gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
              |||||||||||| ||| | |||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  63414 ttttttttttgcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccaccta 63332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 25336148 - 25335981
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||| || ||| |||||||||||||| |||||| ||| ||||||||||         
T  25336148 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttt 25336049  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||||        ||||||||||| || |||  |||| |||||||| ||||||||||||||||||    
T  25336048 tttgcagttttagtca--------tatttccaactacaaaaattcacataaatgacacttttagtccaaccaccta 25335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 4809422 - 4809253
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||| ||||||||||| || || ||  | |||||||| ||| ||| || |||||||| ||||||       ||    
T  4809422 ttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttttt-gc 4809324  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||||||||| || ||| ||||| |||||||||||||||||||||||||||    
T  4809323 agttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccaccta 4809253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 43215809 - 43215881
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||| ||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccaccta 43215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 32418694 - 32418550
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| ||||||  ||||  |||||||||||| |||||||||||||  |||||||||||||||||| |||||| |||||||| |||||         
T  32418694 taggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatat-attt 32418596  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgca 364  Q
       ||||||||| || ||| |||||||||||||||| | |||||||    
T  32418595 tttgcagttttaatcttatctccctatttccaactctagaaacgca 32418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 6949987 - 6949898
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatat 313  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || ||| |||||||||| ||| |||||| ||| |||| |||||    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatat 6949898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 380
Target Start/End: Complemental strand, 31797320 - 31797166
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| |||||||||||| ||||||||| || |||| ||||||| |||||||| |||| | ||| |||| ||||||       ||    
T  31797320 ttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg-ttttttgc 31797222  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagtttt 380  Q
    |||||||||| ||  | ||||||| |||||| | ||||||| |||||||||||||||    
T  31797221 agttttagtcctacct-cctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 5560054 - 5560143
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatat 313  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || ||||| || |||||||| ||| |||||| |||||||| |||||    
T  5560054 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatat 5560143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 20495191 - 20495279
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    ||||||||||| |||||||  | ||  ||||||||||||||||||||| ||||||| ||||||||||||| || |||||| ||| ||||    
T  20495191 taggtttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaa 20495279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 22445741 - 22445812
Alignment:
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||  ||| ||||||||| ||||| || |||| |||| ||||||||||||||||| |||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccaccta 22445812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 9329985 - 9330043
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtc 384  Q
    |||||||| ||| ||| |||||||||||| | |||||||||||||||||||||| ||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagtc 9330043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 382
Target Start/End: Complemental strand, 28143577 - 28143416
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnn 317  Q
    |||| |||||| |||||||  ||||  ||||||||||| ||||||||| || || | ||||||| |||||||| |||||| ||| |||| ||| |||       
T  28143577 taggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt 28143478  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
        |||||||||||| ||  ||| ||||| |||||||| ||||||| |||||||||||||||||    
T  28143477 tt--gcagttttagtcctacgtcc-tattttcaactccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 649880 - 649796
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaat 308  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || ||  | |||||||||||| |||||| |||| ||||    
T  649880 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcctgaaat 649796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 2190597 - 2190532
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat 311  Q
    ||||||||||| |||||||||||| || | ||| ||| |||||||| |||||| ||| ||||||||    
T  2190597 cattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattat 2190532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 3824255 - 3824179
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    ||||||||||| ||||||  || |  |||||| ||||||||||||||||| |||| ||  |||||||||||| ||||    
T  3824255 aggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 28289687 - 28289856
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||| |||||||||||        |    
T  28289687 ttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttc-c 28289785  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28289786 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28289856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 18150272 - 18150097
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||| | ||||||  |||||||| |||||||||||||| || |||||||||||||||||| |||||||||| |||| ||||||        
T  18150272 taggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 18150173  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  18150172 tttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccaccta 18150097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 15115640 - 15115472
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||| || || |||||||||||||||||| |||||| |||||||| |||||         
T  15115640 taggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat----t 15115545  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       ||||||||||||||||  ||||||||||||||| | ||||||||| |||||||||||||||| |||||||    
T  15115544 tttgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccac 15115472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 225 - 394
Target Start/End: Original strand, 38900648 - 38900814
Alignment:
Q  225 taattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngca 324  Q
    |||||||||||||  ||||  ||||||||||||||||||||| ||||| |||||||||||||||||| |||||| ||| |||||||||||       |||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttgca 38900746  T
Q  325 gttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||| ||| |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacgtacataaatgacag--ttagtccaaccaccta 38900814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 218 - 390
Target Start/End: Complemental strand, 28290193 - 28290022
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||| ||||||||||||||  ||||  ||||||||||||||||||||| || || || |  |||||||||||| |||||| |||||||| ||||||       
T  28290193 ataggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgttt 28290094  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
        |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28290093 ttt-gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacca 28290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 19291359 - 19291529
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||   ||||||| |||||||| ||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 19291458  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19291459 agttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 19291529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 21371244 - 21371070
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| |||||| ||||||||||||||||  |||||| || ||||||||||||||| || |||||| ||| |||| ||||||        
T  21371244 taggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgtttt 21371145  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||| |||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  21371144 tt-gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccaccta 21371070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 217 - 394
Target Start/End: Complemental strand, 15029859 - 15029683
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||  ||||||||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| ||||||      
T  15029859 aataggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg-t 15029761  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||   || |||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  15029760 tttttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccaccta 15029683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 4967319 - 4967146
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg-nnn 317  Q
    |||| ||||||||||||||  |||| |||||||||||||||||| ||| || || |||||||||||||||||| |||||| ||| |||| ||||||        
T  4967319 taggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 4967220  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
        |||||||||||| |||||||||||||| ||||| | ||||||||| |||||| |||||||||||||||||    
T  4967219 ttttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccac 4967146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 32697769 - 32697597
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg--nnnnnnn 321  Q
    ||||||||||||||  || || |||||||||||||||||||||||| || |||||||||||||||||| | |||| ||| |||| ||||||             
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatttt 32697670  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| |||  |||||||||||||||||| |||| |||||||||||||  |||||||||||||||||    
T  32697669 gcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccaccta 32697597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 8419163 - 8418995
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||  || || || || |||||||| ||| |||||| |||||||| |||||        ||    
T  8419163 ttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat--ttttttgc 8419066  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||    
T  8419065 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacaccta 8418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 394
Target Start/End: Original strand, 4966818 - 4966987
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| |  |  | |||||||||||||||| |||||| ||| |||| ||||||       |    
T  4966818 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgttttta-g 4966916  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||  ||||||||||||||| | ||| ||||||||||||||||||| | |||||||||||    
T  4966917 cagttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccaccta 4966987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 390
Target Start/End: Complemental strand, 14340954 - 14340785
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa--ttatatgnnnnnn 320  Q
    |||||||||| ||||  | ||| |||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||   |||||           
T  14340954 tttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttt 14340855  T
Q  321 ngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
     | |||||||||| ||| ||| |||||||||||||| ||||| | ||||||||||||||||||| |||||    
T  14340854 tgtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 360
Target Start/End: Original strand, 18149730 - 18149871
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||| |||||||||||||| |||||  ||||| ||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       
T  18149730 ataggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tt 18149828  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaa 360  Q
        |||||||||||| ||| ||||||||||||||||||||||    
T  18149829 ttttgcagttttagtcctatttccctatttccaactccataaa 18149871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 5162112 - 5162022
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    ||||||||| ||||||||||| |||||||||||||||| || |||  ||||||||||||||||||||| |||||| ||| |||||||||||    
T  5162112 ttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatg 5162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 38901183 - 38901020
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||| ||  ||||||| || || ||||  |||||||||||| |||||| |||||||| ||||||       ||    
T  38901183 ttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 38901085  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    ||||||||| |||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||||    
T  38901084 agttttagttatatctccttatttccaac--cagaaacgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 387
Target Start/End: Original strand, 39083362 - 39083525
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    |||||||||||||  |||||  ||||||||||||||||||||| || || ||  | |||||||||||| |||||  | |||||| |||||         |    
T  39083362 ttaattacactttg-atcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttg 39083460  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaa 387  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  39083461 cagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaa 39083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 5161632 - 5161755
Alignment:
Q  271 tcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaa 370  Q
    ||||| || |||||||||||| |||||  || ||||||||||||       |||||||||||| ||| | ||||||||||||| || ||||||| |||||    
T  5161632 tcatatcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaa 5161731  T
Q  371 tgacagttttagtccaaccaccta 394  Q
    ||||||||||||| ||||||||||    
T  5161732 tgacagttttagttcaaccaccta 5161755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 382
Target Start/End: Original strand, 16752580 - 16752741
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||| | ||||||||||| ||||||||| ||||||| | ||||| |||||||| |||||| ||| |||| ||||||        
T  16752580 taggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatg-ttt 16752678  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
       |||||||| ||||||  | ||||||| |||||||||||||||| |||||||| ||||||||    
T  16752679 tttgcagtttttgtcatacct-cctattttcaactccataaacgcaaagaaatgatagttttag 16752741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 394
Target Start/End: Original strand, 22651371 - 22651517
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||||||| |||||| || || |||| ||||||||||||| || |||| |||||||||| ||| |||       |||||||||||| ||  ||| |||    
T  22651371 attttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgttttt--gcagttttagtcctacctccttat 22651468  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    || |||||||| ||||||||| ||||| |||||||||||||||||||||    
T  22651469 tttcaactccagaaacgcacaaaaatggcagttttagtccaaccaccta 22651517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 14340480 - 14340549
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||| || ||| || ||||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccac 14340549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 22651760 - 22651719
Alignment:
Q  353 tccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccaccta 22651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 17260769 - 17260680
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    ||||| |||||| |||||||  ||||  |||||||||||| |||||||| ||||  ||||||||| |||||||| |||| ||||| ||||    
T  17260769 ataggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaa 17260680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 32697458 - 32697507
Alignment:
Q  345 tttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| |||| |||||||||||||  |||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccaccta 32697507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 21370798 - 21370868
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgc--acagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||| |||||||||||||||||| ||||||  | | ||||| |||||||||||| ||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccaccta 21370868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 2864878 - 2864915
Alignment:
Q  345 tttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  2864878 tttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 8647859 - 8647822
Alignment:
Q  345 tttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8647859 tttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 14340394 - 14340475
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatc 298  Q
    ||||| |||||||||| ||||  ||||  |||||||| |||||||||||| || || || || |||||||||||| ||||||    
T  14340394 aatagatttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc 14340475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 27307179 - 27307220
Alignment:
Q  341 cctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    ||||||| |||||||| ||||||| |||||||||||||||||    
T  27307179 cctattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 22651859 - 22651771
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    |||| ||||||||||||||| ||||  ||||||||||| ||||||||| || |  | ||| ||| |||||||| |||||| ||| ||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaa 22651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 217 - 394
Target Start/End: Original strand, 40838648 - 40838824
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||| || |||||||||||||||||| || |||||| ||| |||| ||||||      
T  40838648 aataggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgtt 40838747  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40838748 tttt-gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 40838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 46013425 - 46013594
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  46013425 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg-ttttttgc 46013523  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||    
T  46013524 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccaccta 46013594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 217 - 394
Target Start/End: Original strand, 47431692 - 47431869
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||  ||||||||||||||||||||| || ||||||||||||||||||||| |||||| || ||||| ||||||      
T  47431692 aataggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtt 47431791  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  47431792 tttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccaccta 47431869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 220 - 394
Target Start/End: Complemental strand, 51473403 - 51473229
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||         
T  51473403 aggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 51473304  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      |||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  51473303 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccaccta 51473229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 217 - 394
Target Start/End: Original strand, 41998225 - 41998402
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||  ||||||||||||||| ||||| || || || || |||||||||||| |||||| |||||||| ||||||      
T  41998225 aataggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 41998324  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41998325 tttttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccaccta 41998402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 49720369 - 49720543
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| |||| |        
T  49720369 taggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacg-ttt 49720467  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  49720468 tttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccaccta 49720543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 51828542 - 51828708
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||| | ||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  51828542 ttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttttgc 51828641  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  51828642 agttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacca 51828708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 49952089 - 49951920
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| || ||||| || |||       ||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgtttttt-gc 49951991  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  49951990 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 49951920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 52375879 - 52375708
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || || |||||||||||||| ||| |||||| ||| |||| ||||||        
T  52375879 taggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgtttt 52375780  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52375779 tt-gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 52375708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 221 - 388
Target Start/End: Complemental strand, 40839198 - 40839032
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnn 320  Q
    |||||||||||||||||  |||| |||||||||| ||||||||||| || || |||||||||||||||||| |||||| ||| |||| ||||||          
T  40839198 ggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 40839099  T
Q  321 ngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaac 388  Q
     |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  40839098 -gcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaac 40839032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 52237360 - 52237194
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||||||||||       ||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttgc 52237262  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| |||||||||| ||||||  ||||||||||||||||||||||||||| ||||||    
T  52237261 agttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccac 52237194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 40275636 - 40275468
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||| ||  |||| ||||||       ||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacgaaatgg-tcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt-gc 40275539  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  40275538 agttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 40275468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 51472858 - 51473027
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| ||||||  ||||| |||||||||||||||| ||||||  || ||||||||||||||| || |||||  ||| |||| ||||||       ||    
T  51472858 ttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttttt-gc 51472956  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51472957 agttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 51473027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 51827960 - 51828129
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || || ||||||||||||||| |||||| ||| |||| ||||||       ||    
T  51827960 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 51828058  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  51828059 atttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 51828129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 394
Target Start/End: Original strand, 55389609 - 55389777
Alignment:
Q  225 taattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngca 324  Q
    |||||||||||||  ||||  ||||| ||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| ||||||       |||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gca 55389707  T
Q  325 gttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  55389708 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaccta 55389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 391
Target Start/End: Original strand, 49951545 - 49951715
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||         
T  49951545 aggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 49951644  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
      ||| |||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  49951645 t-gcaattttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccac 49951715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 43678298 - 43678467
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||  || ||||| || |||||||||||| |||||| |||||||| ||||||       ||    
T  43678298 ttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 43678396  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  43678397 agttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccaccta 43678467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 386
Target Start/End: Original strand, 44676475 - 44676636
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||| | ||| |||| ||||||       ||    
T  44676475 ttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatg-ttttttgc 44676573  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtcca 386  Q
    || ||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  44676574 agctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 52236819 - 52236988
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||| ||| |||||||| || ||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-gc 52236917  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||  |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  52236918 agttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcaccta 52236988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 246 - 394
Target Start/End: Original strand, 2044296 - 2044443
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||||||||||||| |||| || ||||||||||||||||||||| |||||| ||| |||||||||||       | |||||||||||||| |||||||    
T  2044296 cattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgttttttgg-agttttagtcatatctccctat 2044394  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||||||    
T  2044395 ttccaactcaagaaacgcacataaataacagttttagtccaaccaccta 2044443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 25534893 - 25535063
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatcct-taaattatatgnnnnnnng 322  Q
    ||||||||||||||  ||||  |||||||||||| ||| |||| || || |||||||||||||||||| |||||| |||  |||||||||||       |    
T  25534893 ttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgtttttt-g 25534991  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25534992 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 25535063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 51828501 - 51828331
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  || |||||||||||||||||| || |||||  | |||||||||||| |||||  |||||||| ||||||       ||    
T  51828501 ttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttttgc 51828402  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  51828401 agttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactaccta 51828331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 330379 - 330210
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||| |||  ||||  ||||||||||||||||||||| || || ||||| ||||||||| || |||||| ||| |||| ||||||       ||    
T  330379 ttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt-gc 330281  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  330280 agttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccaccta 330210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 394
Target Start/End: Complemental strand, 44677019 - 44676846
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||| || ||||| || |||||||||||| |||||| |||||||| ||||||         
T  44677019 aggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 44676921  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      ||| |||||||| ||| || |||||| |||||||| ||||||||| ||||||||||||||||| |||||||||    
T  44676920 ttgcaattttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccaccta 44676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 40275096 - 40275264
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || || |||||||||||||||||| |||||  ||| |||| | ||||        |    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttg 40275195  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||||| ||| ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  40275196 cagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccac 40275264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 30513725 - 30513894
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| ||||||||| ||||||||||| || || || || ||||||||||||||||||| || ||||| ||||||       ||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtc-ttaaactatatgtttttctgc 30513823  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||| |||||| |||| || ||||||||||||||||||||||||||||| |||||||    
T  30513824 agttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccaccta 30513894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 32730387 - 32730561
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||||||||||||||||||  ||||| |||||||||||||||  ||||||| || |||||||||||||| ||| |||||| ||| |||| ||||||        
T  32730387 taggtttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatg-ttt 32730485  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||||||||| || ||| |||||||||||||||| | ||||||||| |||||||||||||||| ||| ||||||    
T  32730486 tttgcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcaccta 32730561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 46013966 - 46013796
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  | ||  ||||||||||||||| | ||| || |  || || |||||||||||| |||||| |||||||| ||||||       ||    
T  46013966 ttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 46013867  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  46013866 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 46013796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 43678827 - 43678658
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||| ||||||||||| ||| ||  ||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  43678827 ttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt-gc 43678729  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||| |||||||| | |||||||||||||| | ||||||||| |||||||||||||||| ||||||||||    
T  43678728 agtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccaccta 43678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 50662955 - 50662786
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| ||||||  ||||  ||||||||| ||||||||||| |  ||||| || |||||||||||| |||||| |||||||| ||||||       ||    
T  50662955 ttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 50662857  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  50662856 agttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccaccta 50662786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 389
Target Start/End: Complemental strand, 16701335 - 16701168
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-- 321  Q
    ||||||||| ||||  ||||  ||||||||||||||||||||| || ||||| || |||||| ||||| |||||| |||||||| ||||||             
T  16701335 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgttttttttt 16701236  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 389  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  16701235 gcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 394
Target Start/End: Complemental strand, 34105190 - 34105022
Alignment:
Q  227 attacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-gcag 325  Q
    |||||||||||  ||||| |||||||||||||| ||||| ||| || | |||||||||||||||| |||||| ||| |||| ||||||        ||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||  || ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  34105090 ttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccaccta 34105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 38535843 - 38535672
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| ||||||  ||| | |||||||||||||| ||||||||  ||  | |||||||||||||||||||||| ||| |||| ||||||        
T  38535843 taggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttt 38535744  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       |||||||||||| ||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  38535743 tt-gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccac 38535672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 14654732 - 14654569
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||    |||||||||||||||||| |||||| ||| |||| ||| |        ||    
T  14654732 ttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgt---tttttgc 14654636  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||| ||| ||| |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  14654635 agttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaacca 14654569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 219 - 390
Target Start/End: Original strand, 38535307 - 38535477
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  |||||||||||||||| |||| || || || || |||||||||||| |||||| |||||||| ||||||        
T  38535307 taggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 38535406  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
       ||||||| |||| ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  38535407 tt-gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 39010078 - 39010243
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||  | |||||| | ||||       ||    
T  39010078 ttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatg-ttttttgc 39010176  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||||| || ||||||||| |||||||||||| ||||| |||||| |||||||||||||||||    
T  39010177 agttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccac 39010243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 52375330 - 52375496
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||| ||||||| ||||| |||||||| || ||||||||||||||||| ||| |||||| ||| |||| ||||||       ||    
T  52375330 ttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatg-ttttttgc 52375428  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||  ||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  52375429 agttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccac 52375496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 55390145 - 55389971
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  |||||| ||||| |||||||| || || ||||| ||||||||| || |||||| ||  |||| ||||||        
T  55390145 taggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgtttt 55390046  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       | |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55390045 tt-gtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 55389971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 2051293 - 2051471
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| | |||||| ||||||        
T  2051293 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttt 2051392  T
Q  319 nnn---gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
          ||||||||| || ||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  2051393 ttttttgcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 2051471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 394
Target Start/End: Complemental strand, 51829060 - 51828914
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatt 346  Q
    ||||||| |||||||||||| || || || || |||||| || || |||||| |||||||| ||||||       |||||||||||| ||| ||||||||    
T  51829060 attttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttttt-gcagttttagtcctatctccctatt 51828962  T
Q  347 tccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  51828961 tccaacttcataaacgcacataaatgacagttttagtccaaccaccta 51828914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 32730932 - 32730763
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  || |  |||||| ||||||||| |||| || || || || |||||||| ||| |||||| |||||||| ||||||       ||    
T  32730932 ttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatgtttttt-gc 32730834  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||| || ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  32730833 agttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccaccta 32730763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 383
Target Start/End: Original strand, 22370598 - 22370758
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| || || ||||| ||||||| | || |||||| ||| |||| ||||||       |    
T  22370598 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttg 22370697  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagt 383  Q
    ||||||||||| ||| ||| ||| |||||||||| |||||||||||||| |||||||||||    
T  22370698 cagttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 392
Target Start/End: Original strand, 14654197 - 14654361
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| || ||  ||||||||||||||||||||| || || || || |||||||||||| |||||| || ||||| ||||||        
T  14654197 taggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttt 14654296  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacc 392  Q
       ||| ||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14654297 tt-gcatttttagtc--------ctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 16689354 - 16689451
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||    
T  16689354 aataggtttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg 16689451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 394
Target Start/End: Original strand, 34104644 - 34104809
Alignment:
Q  227 attacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagt 326  Q
    |||||||||||| | ||  ||||||||||||||||||||| || |  || || |||||||| ||| |||||| || ||||| ||||||       |||||    
T  34104644 attacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgtttttt-gcagt 34104742  T
Q  327 tttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| ||| |||||||| ||||| ||||||||| |||||||| ||||||||||||||||||    
T  34104743 tttagtcatatctcc-tatttccagctccagaaacgcacaaaaatgacatttttagtccaaccaccta 34104809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 49720904 - 49720773
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||   |||||||||||||||||||| || ||||| || |||||||||||| |||||| |||||||| ||||||       ||    
T  49720904 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 49720806  T
Q  324 agttttagtcatatatccctatttccaactcca 356  Q
    |||||||||| ||| ||||||||||||||||||    
T  49720805 agttttagtcttatctccctatttccaactcca 49720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 360
Target Start/End: Original strand, 329850 - 329984
Alignment:
Q  225 taattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngca 324  Q
    |||||||||||||  | ||| ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       |||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgca 329948  T
Q  325 gttttagtcatatatccctatttccaactccataaa 360  Q
    ||||||||| ||| ||||| ||||||||||||||||    
T  329949 gttttagtcctatctccctgtttccaactccataaa 329984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 41998771 - 41998697
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatc 298  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||||| || |||||||||||||||||| ||||||    
T  41998771 ttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatc 41998697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 392
Target Start/End: Complemental strand, 43222933 - 43222765
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||| ||||||||  ||||  ||||||||| | | ||||||| || |||| |||||||||||||||| |||||| ||| |||| | ||||       ||    
T  43222933 ttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgtttttttgc 43222834  T
Q  324 agttttagtcatatatccctatttc-caactccataaacgcacagaaatgacagttttagtccaaccacc 392  Q
    ||||||||||  |   ||||||||  |||||||| ||||||||| |||||||||||||||||||||||||    
T  43222833 agttttagtcccacc-ccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 36701109 - 36701192
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    ||||||||||||||  ||||  |||||||| |||||||||||| ||||||| ||||||| |||||||| |||||| ||| ||||    
T  36701109 ttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaa 36701192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 36701639 - 36701482
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||| ||||||||| || ||||  |||||| |||||||| |||||||||| |||| |||          ||    
T  36701639 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgc 36701540  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||||||||||||  | ||||||| |||||||| |||| || ||||||| |||||||||    
T  36701539 agttttagtcatacct-cctattttcaactccagaaacacatagaaatggcagttttag 36701482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 27199698 - 27199777
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||||||||||||||| ||||  ||||  ||||||||||| ||||||||| || |||| ||||||| |||||||| ||||    
T  27199698 aataggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 27199777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 382
Target Start/End: Original strand, 49407794 - 49407955
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||| ||||||||| || |||| ||||||| |||| ||| |||| | ||| |||| | ||||        
T  49407794 taggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgtttt 49407893  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
        ||||||||||||||  | ||||||| |||||||| ||||||| |||||||||| ||||||    
T  49407894 gta-cagttttagtcatacct-cctattttcaactccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 40490792 - 40490747
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaa 291  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||    
T  40490792 cattttgaccaattcacgaaattgatcatacattttttaaatcgaa 40490747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 43222517 - 43222562
Alignment:
Q  349 caactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||    
T  43222517 caactccagaaacgtacaaaaatgacagttttagtccaaccaccta 43222562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 39010542 - 39010482
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaa 306  Q
    ||||||||||| ||||||||| ||||| || || |||||||||||| |||||| |||||||    
T  39010542 cattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaa 39010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 8874232 - 8874139
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    ||||||||||||||||| ||||   | ||||||||| ||||||||| || || | | |||||||||||||| |||| | ||| |||| ||||||    
T  8874232 ggtttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatg 8874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 43222414 - 43222483
Alignment:
Q  245 acattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||||||||||||||||| |  | ||  ||||||||||||||| |||||| ||| |||| ||||||    
T  43222414 acattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg 43222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 55192236 - 55192277
Alignment:
Q  341 cctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    ||||||| |||||||| ||||||| |||||||||||||||||    
T  55192236 cctattttcaactccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 27200137 - 27200078
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||||||||||||||  ||| ||||| |||||||| ||||||| ||||||||||| |||||    
T  27200137 gcagttttagtcatacctcc-tattttcaactccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 27200239 - 27200167
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaa 291  Q
    |||| ||||||||||||||  ||||| ||||||||||| ||||||||| || |  | ||||||| ||||||||    
T  27200239 taggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaa 27200167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 786785 - 786955
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || |||||||| |||||||||||| |||||  |||||||| ||||||       ||    
T  786785 ttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttttgc 786884  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  786885 agttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccaccta 786955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 16081842 - 16081676
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||| |||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||||       ||    
T  16081842 ttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatg-ttttttgc 16081744  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16081743 agttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccac 16081676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 9181955 - 9181783
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg--nnnnnnn 321  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||             
T  9181955 ttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttt 9181856  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
     ||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  9181855 ccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 9181783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 222 - 394
Target Start/End: Complemental strand, 28688043 - 28687873
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||           
T  28688043 gtttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttt 28687946  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||| |||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28687945 gcacttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28687873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 7732486 - 7732660
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||| ||||  ||||| |||||||| ||||||||||||||| || |||||||||||||||||| |||||| |||||||| ||||||        
T  7732486 taggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttt 7732585  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  7732586 tt-gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccaccta 7732660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 26026318 - 26026487
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||||||||  |||||  |||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||           
T  26026318 gtttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgttttttt 26026417  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  26026418 gcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccac 26026487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 27245206 - 27245376
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| |||  |||  |||||       ||    
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttttgc 27245305  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27245306 agttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccaccta 27245376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 26048489 - 26048321
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| | |||||||||||||||||||||| || ||||||||||||||| || |||||  |||||||| ||||||       ||    
T  26048489 ttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgttttt--gc 26048392  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  26048391 agttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccaccta 26048321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 217 - 394
Target Start/End: Complemental strand, 25637748 - 25637572
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    ||||| |||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||      
T  25637748 aatagatttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 25637649  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  25637648 tttt-gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccaccta 25637572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 48247585 - 48247763
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||| ||||||||||||||| || ||||||||||||||| || |||||| ||| |||| |||||         
T  48247585 taggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatatttt 48247684  T
Q  319 nnn---gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
          |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48247685 ttttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaccta 48247763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 227 - 394
Target Start/End: Complemental strand, 35161342 - 35161175
Alignment:
Q  227 attacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagt 326  Q
    |||||||||||  ||||| |||||||||||||||||| ||||| || |||||||||||||||||| |||||| ||| |||| ||||||       |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  327 tttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| |||||| | || ||||||||    
T  35161242 tttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccaccta 35161175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 48248140 - 48247965
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||| ||| || || || || |||||||||||| |||||| |||||||| ||||||        
T  48248140 taggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 48248041  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48248040 tttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 48247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 9181535 - 9181704
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| |||||        ||    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-tttttttgc 9181633  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9181634 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 9181704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 25637195 - 25637370
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| ||| |||||||||||| ||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  25637195 taggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 25637294  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       | |||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  25637295 tttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccaccta 25637370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 394
Target Start/End: Original strand, 5745641 - 5745811
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| || ||||| || |||||||||||| |||||| | |||||| ||||||       |    
T  5745641 tttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgtttttt-g 5745739  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  5745740 cagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccaccta 5745811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 39388811 - 39388643
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||  || |||||||||||||||||| |||||| ||  |||| ||||||       ||    
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttgc 39388712  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcac-agaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| ||||||||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  39388711 agttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccac 39388643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 5746183 - 5746013
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||||||||| | |||||||||||||||| |||| | ||| |||| ||||||        |    
T  5746183 ttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactatatgttttttttg 5746085  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    || |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  5746084 caattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcaccta 5746013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 24929851 - 24929677
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-- 321  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||| || ||||||||||||||| || |||||| ||| |||| |||||              
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatattttttt 24929752  T
Q  322 --gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  24929751 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgaccta 24929677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 394
Target Start/End: Complemental strand, 27245725 - 27245578
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||||| |||||||||||| || || || || |||||||||||| |||||| |||||||||||||||       ||| |||||||||||| |||||||    
T  27245725 cattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtatttt-gcaattttagtcatatctccctat 27245627  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  27245626 ttccaactccagaaacgcacagaaatcatagttttagtccaaccaccta 27245578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 7733030 - 7732861
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| ||||| || || |||||||||||| |||||| |||||||| ||||||       ||    
T  7733030 ttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 7732932  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||| ||| ||||||||| |||||||||||| |||||||||| ||| || |||||||||||||||    
T  7732931 aattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccaccta 7732861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 394
Target Start/End: Original strand, 14311340 - 14311488
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||| |||||||||  |||||| | ||||||||||||||| |||||||||| ||| |||| ||||||        |||||||| || ||| |||||||    
T  14311340 cattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgtttttttacagttttaatcctatctccctat 14311439  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  14311440 ttccaactccataaacacacataaatgacagttttagtccaaccaccta 14311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 394
Target Start/End: Complemental strand, 11973947 - 11973776
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||| ||||  ||||| |||||||||||||  ||||||||| |  |||||||||||||| ||| |||||| ||| ||||||| |||           
T  11973947 gtttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggttttt- 11973849  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||  ||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccaccta 11973776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 15712368 - 15712534
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| |||||        |     
T  15712368 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-attttttgt 15712466  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccac 15712534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 26026866 - 26026692
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||||||||||||||||||  ||||   |||||||| || |||||||| || || || || || ||||||||| |||| |||||||||| ||||||        
T  26026866 taggtttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgtttt 26026767  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||  ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26026766 tt-gcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccaccta 26026692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 14311830 - 14311661
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||| || |  || |||||||||||||| ||| || || || || |||||||||||| |||||| || ||||| ||||||       ||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt-gc 14311732  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  14311731 agttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccaccta 14311661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 356
Target Start/End: Original strand, 5333876 - 5334014
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||| ||||||      
T  5333876 aataggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg-t 5333974  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactcca 356  Q
         ||||||||||||||||  |||||||||| ||||||    
T  5333975 tttttgcagttttagtcatatccccctatttcctactcca 5334014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 16081302 - 16081468
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||||  ||||||||||||||| | || || || || || |||||||||||| |||||| |||||||| ||| ||       ||    
T  16081302 ttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgtttttt-gc 16081400  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  16081401 agttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccac 16081468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 2758241 - 2758075
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||  |||||||||||| || |  |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  2758241 ttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt-gc 2758143  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    || |||||||||||  ||||||||| ||||||| ||||||| | ||||||||||||||||||||||||    
T  2758142 aggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccac 2758075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 26047960 - 26048120
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| || ||  ||||| ||||||||||||||| || ||||| || ||||||||||||||||||  |||||||| ||||||             
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatg--------- 26048050  T
Q  324 agttttagt-catatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      ||||  | | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26048051 --ttttgttgcctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 26048120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 224 - 392
Target Start/End: Complemental strand, 34595315 - 34595148
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnnnnnng 322  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || || | | |||||||||||||| |||||| ||| |||| ||| |||       |    
T  34595315 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgttttt--g 34595218  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacc 392  Q
    ||||||||||  ||   || ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  34595217 cagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacc 34595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 11971337 - 11971510
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng- 322  Q
    ||||||| ||||||  ||||  |||||||||| |||||||||| || || || || |||||||||||| |||||| |||||||| ||||||             
T  11971337 ttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 11971436  T
Q  323 --cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      ||||||||||| ||| ||||||||||||| || | |||| |||| |||||||||||||||||||||||||||    
T  11971437 tacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccaccta 11971510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 391
Target Start/End: Complemental strand, 787335 - 787159
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg--- 314  Q
    ||||||||||||||||||||  | ||   |||||||||||||||||||| || || |||||||||||||||||| |||||| ||| |||| ||| ||       
T  787335 ataggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgttt 787236  T
Q  315 nnnnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
           | |||||||||| ||| | | ||||| |||||||| ||||||||| |||||| |||||||||||||||||    
T  787235 ttaatttgtagttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccac 787159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 16917711 - 16917806
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || ||||| || |||||||||||| |||||| |||||||| ||||||    
T  16917711 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 16917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 5334362 - 5334273
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatat 313  Q
    ||||||||||||||  |||| |||||||||||||||||||||| |  || |||||||||||||||||| |||||| ||| |||| |||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 40669754 - 40669689
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaa 286  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| | |||||||    
T  40669754 ggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 379
Target Start/End: Original strand, 28687596 - 28687750
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  || |  ||||||||||||||||||||| || |  || || || ||||||||| |||||| |||||||| |||||        ||    
T  28687596 ttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat-tttttttgc 28687694  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttt 379  Q
    |||| ||||| ||| | |||||||||||||||| ||||||||| ||||||||||||    
T  28687695 agttctagtcctatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 4477705 - 4477788
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    ||||||||||| || ||||||||||||||||||| |||||||| || ||   |||||||||||| |||||||||| ||| ||||    
T  4477705 ttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaa 4477788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 35160906 - 35160973
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||| ||||||||| |||||||| |  ||||||||||||| ||||||||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccaccta 35160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 33881030 - 33880969
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtc 384  Q
    |||||||||||| |||  |||||||| |||||||| ||||||||| |||||||||||||||||    
T  33881030 gcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 5184424 - 5184476
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattg 269  Q
    |||||||||||||||| ||||  |||||  |||||||||||||||||||||||    
T  5184424 aataggtttaattacatttttggtccttggattttgaccaactcacgaaattg 5184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgac 374  Q
    |||||||| ||| |||||||||||||||||| ||| |||||||||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 39136684 - 39136772
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    |||| |||||||||||||| |||||| ||||||||||| ||||||||| || |  |  |||||| |||||||| |||||| ||| ||||    
T  39136684 taggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaa 39136772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 39137076 - 39136993
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    |||||||||||||| |||||   |||||||||  ||||||||| || || | |||||||||||||||| |||||| ||| ||||    
T  39137076 ttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaa 39136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 9394176 - 9394117
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||||||||||| ||| ||| ||||||||||| || |||| || |||||||||||||||||    
T  9394176 gcagttttagtcctatctcc-tatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 35579428 - 35579364
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatc 288  Q
    |||||||||||||| |||||  |||||||| || ||||||||| |||| || ||||||| |||||    
T  35579428 ttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatc 35579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 28465084 - 28465253
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||||| ||||||       ||    
T  28465084 ttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 28465182  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  28465183 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 28465253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 34807114 - 34807289
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||        
T  34807114 taggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttt 34807213  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  34807214 tttgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 34807289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 34789926 - 34789756
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||  ||| |||| ||||||       ||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 34789827  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  34789826 agttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccaccta 34789756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 46737203 - 46737029
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 46737104  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  46737103 tt-gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 46737029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 217 - 385
Target Start/End: Original strand, 19528865 - 19529033
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||| |||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||| ||||||      
T  19528865 aataggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtt 19528964  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtcc 385  Q
         |||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  19528965 tttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 21034238 - 21034408
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||        |    
T  21034238 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttac 21034337  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21034338 agttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 33689827 - 33690000
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||| |||||||| ||||||        
T  33689827 taggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg--tt 33689924  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||    
T  33689925 tttgcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccaccta 33690000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 222 - 394
Target Start/End: Original strand, 14439829 - 14440000
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||||||| ||||||||  || |||||| ||| |||| ||||||           
T  14439829 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgtttttt- 14439927  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14439928 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 14440000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 24852009 - 24851839
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  24852009 ttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 24851910  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |  ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  24851909 agttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccaccta 24851839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 394
Target Start/End: Original strand, 36168328 - 36168504
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg--nnn 317  Q
    ||||||||||||||||||  ||||| ||||||||||||| |||||||||| || |||||||||||||||||| |||||| |||||||||||||||         
T  36168328 aggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgttttt 36168427  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||| |||||||||| ||||||| ||||||| | ||||||||||| |||||||||||||||    
T  36168428 ttttgcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccaccta 36168504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 12593571 - 12593400
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||  |||| |||||         
T  12593571 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat-attt 12593473  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
       |||||||||||| ||| ||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  12593472 tttgcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccac 12593400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 55677501 - 55677331
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||| ||  |||| ||||||        |    
T  55677501 ttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttac 55677402  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  55677401 aattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcaccta 55677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 14440371 - 14440202
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| ||||||  ||||  |||||||||||||| |||||| || || || || |||||||||||| ||||||||||||||| ||||||       ||    
T  14440371 ttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt-gc 14440273  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  14440272 agttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccaccta 14440202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 54440574 - 54440741
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| ||| |        ||    
T  54440574 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgt---tttttgc 54440670  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||    
T  54440671 agttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccaccta 54440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 221 - 394
Target Start/End: Original strand, 41608374 - 41608547
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnn 320  Q
    |||||||||||||||||  ||||| |||||||| ||||||| ||||||| ||||||||||||||||||||| |||||| |||  ||| ||||||          
T  41608374 ggtttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgtttttt 41608471  T
Q  321 n--gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  41608472 tttgcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccaccta 41608547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 21034780 - 21034610
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| |||||||||||||||||||||||| || || ||||||||||||||| |||||| ||| | || |||||        ||    
T  21034780 ttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttttgc 21034681  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||  ||| |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  21034680 agttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccaccta 21034610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 26974286 - 26974452
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||| || ||||||||||| || ||||| || |||||||||||| |||||| |||||||| ||||||        |    
T  26974286 ttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttac 26974385  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  26974386 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaacca 26974452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 12593027 - 12593196
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  || |||||||||||||||||| || |||||||| |||||||||||| |||||| |||||||| ||||||       ||    
T  12593027 ttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 12593125  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | ||||| || ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  12593126 aattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaaccta 12593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 28465624 - 28465455
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  28465624 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 28465526  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||| ||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  28465525 aattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccaccta 28465455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 34789385 - 34789554
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  34789385 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 34789483  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||    
T  34789484 agttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccaccta 34789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 56077867 - 56077698
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  56077867 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 56077769  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  56077768 agttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccaccta 56077698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 220 - 394
Target Start/End: Original strand, 41114156 - 41114331
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||| ||||||||  ||||  |||||||||||||||||||||  | || || || |||||||||||| |||| | |||||||| ||||||         
T  41114156 aggtttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttt 41114255  T
Q  320 nn-gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  41114256 tttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccaccta 41114331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 45838545 - 45838719
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||| ||||||||||  |||||  ||||||||||||||||| ||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  45838545 taggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 45838644  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||||||||||| ||| || |||||||||||||||| |||||| |||||||||||||    
T  45838645 tt-gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccaccta 45838719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 45839096 - 45838924
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  ||||   ||||||||||||||||||||| | || || || |||||||||||| |||||| |||||||| ||||||         
T  45839096 aggtttaattacacttttggtcctactattttgaccaactcacgaaatgg-tcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 45838998  T
Q  320 nn--gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
        |||||||||||| ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45838997 ttttgcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccac 45838924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 54441112 - 54440943
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||| || ||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  54441112 ttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 54441014  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  54441013 agttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccaccta 54440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 391
Target Start/End: Complemental strand, 34807659 - 34807516
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatt 346  Q
    ||||||| |||||||||||| | ||  || || |||||| ||||| |||||| |||||||| ||||||       |||||||||||| ||| ||||||||    
T  34807659 attttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttg-gcagttttagtcctatctccctatt 34807561  T
Q  347 tccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  34807560 tccaactccataaacgcatagaaatgacagttttagtccaaccac 34807516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 394
Target Start/End: Original strand, 6616671 - 6616845
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  | ||  |||||||| |||||||||||| || || ||  | |||||||||||| |||||| |||||||| ||||||         
T  6616671 aggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgttttt 6616770  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      || || |||||| ||  || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6616771 ttgctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 6616845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 36168879 - 36168705
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||| ||  ||||  ||||||||||||||||||||| ||||| ||  | |||||||| ||| ||||| || |||||||||||||        
T  36168879 taggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgtttt 36168780  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       || ||||||||| ||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  36168779 tt-gcggttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccaccta 36168705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 35643667 - 35643739
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35643667 gcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccaccta 35643739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 24851565 - 24851637
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccaccta 24851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 390
Target Start/End: Complemental strand, 19529242 - 19529071
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  |||||||||||||| |  ||| ||||  || ||||||||||| ||| |||||| || ||||| ||||||        
T  19529242 taggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgtttt 19529143  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
       |||||||||||  ||| ||| |||||||||||  | |||||||||||||||||||||||||||||||||    
T  19529142 tttgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaacca 19529071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 394
Target Start/End: Original strand, 28166000 - 28166176
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||||||||||| | ||||  ||||   |||||||||||||||||||| || || || || |||||||||||| |||||  |||||||| |||||       
T  28166000 aataggtttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-tt 28166098  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||| ||| ||||||||| ||||| || |||||||||||||||| ||||||| | ||||||||||    
T  28166099 tttttgcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccaccta 28166176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 394
Target Start/End: Complemental strand, 16215040 - 16214869
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||| ||||||  ||||  |||||||| ||||| |||||| |||||||| || |||||||| |||||||||| |||||||| |||||            
T  16215040 gtttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat-atttttt 16214942  T
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||| |  ||| | ||||||| |||||||| |||| |||| |||||| ||||||||||||||||||||    
T  16214941 gcagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccaccta 16214869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 356
Target Start/End: Complemental strand, 6617208 - 6617074
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnn 320  Q
    |||||||||||| ||||  | ||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||| |||| |||||           
T  6617208 ggtttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat-tttttt 6617110  T
Q  321 ngcagttttagtcatatatccctatttccaactcca 356  Q
     |||||||||||| ||| ||||||| ||||||||||    
T  6617109 tgcagttttagtcctatctccctatctccaactcca 6617074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 391
Target Start/End: Original strand, 46736681 - 46736824
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatt 346  Q
    |||||||||||||||||||| || || ||  | |||||||||||| |||||  |||||||| ||||||       |||| |||| || ||| ||||||||    
T  46736681 attttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatgtttttt-gcagatttaatcctatctccctatt 46736779  T
Q  347 tccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    | |||||||| |||||||||||||||||||||||||| |||||||    
T  46736780 ttcaactccagaaacgcacagaaatgacagttttagttcaaccac 46736824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 18965580 - 18965513
Alignment:
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||||||   |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  18965580 agttttagtcatactcccctattttcaactccataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 33777630 - 33777725
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||||| ||||||||  | ||| |||||||| |||||| |||||||| ||||||    
T  33777630 taggtttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatg 33777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 41608963 - 41608870
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattata 312  Q
    |||| ||||||||||||||  ||||  |||||||||||||||||||||||| || ||||||||||||||| || |||||| | |||||| ||||    
T  41608963 taggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 394
Target Start/End: Original strand, 229158 - 229333
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnn 316  Q
    ||||||||||||||||||||  ||||   |||||||||| ||| ||||| || || | ||||||| |||| ||| |||||| |||||||| ||| |||      
T  229158 ataggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgtt 229257  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||  ||   || ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  229258 ttt--gcagttttagttctactcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccaccta 229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 35644105 - 35644042
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaat 287  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| | |||||||||||||||||    
T  35644105 ttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 360
Target Start/End: Complemental strand, 33778155 - 33778020
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  | ||  ||||||||| ||||||||||| ||||  ||||||||||||||| || |||||| | | |||||||||||       ||    
T  33778155 ttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatg-ttttttgc 33778057  T
Q  324 agttttagtcatatatccctatttccaactccataaa 360  Q
    |||||||||  ||| ||||||||||||||||||||||    
T  33778056 agttttagttctatctccctatttccaactccataaa 33778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 220 - 394
Target Start/End: Complemental strand, 229706 - 229533
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnnn 318  Q
    ||||||||||||||||||  || |  ||||||||||| ||||||||| || || | ||||||| ||||| || |||||| |||||||| ||| |||        
T  229706 aggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgtttt 229607  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       ||||||||| || ||  ||| ||||| |||||||| |||||||||||| ||||| ||||||| ||||||||||    
T  229606 t--gcagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccaccta 229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 350
Target Start/End: Complemental strand, 26974788 - 26974662
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||  ||||| ||||||||  || ||||||||||| || |||||||||||||||||| |||||  ||| |||| ||||||       ||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  324 agttttagtcatatatccctatttcca 350  Q
    |||||||||||||| | ||||||||||    
T  26974688 agttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 24851312 - 24851407
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattata 312  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||||||| || |  || || |||||||| ||| |||||| |||||||| ||||    
T  24851312 aataggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 382
Target Start/End: Original strand, 35193333 - 35193467
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||||| || ||||||||| || || ||||||||| |||||||| |||||| ||| |||| ||||||       |||||||||||| ||| ||| |||    
T  35193333 cattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctcc-tat 35193430  T
Q  346 ttccaactccataaacgcacagaaatgacagttttag 382  Q
    || ||||| || ||||||| |||||||||||||||||    
T  35193431 tttcaacttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 24335759 - 24335836
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||| |||||||||||||  |||||| ||||||||||| ||||||||| || |||| ||||||| |||||||| ||||    
T  24335759 taggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 35643580 - 35643648
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    ||||||||||||||||||||| || || || || ||| |||| |||||||||| |||||||| ||||||    
T  35643580 cattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatg 35643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 51641373 - 51641309
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatc 288  Q
    ||||||||||||||  ||||| ||||| ||| ||||||||||||||||| | ||| |||||||||    
T  51641373 ttaattacacttttagtccttgcatttagacaaactcacgaaattgatcctgccttttttaaatc 51641309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 1397598 - 1397681
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    |||||||||||||| ||||   ||||||||||||||||  ||| || || || || |||||||||||| |||||| ||||||||    
T  1397598 ttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 1397681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 40160636 - 40160561
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||||||||||| ||||  ||||| ||||||||||||||||||||| |  |||| ||||||| |||| ||| ||||    
T  40160636 ggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaa 40160561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 24335864 - 24335920
Alignment:
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagtttta 381  Q
    |||||||||| || | |||||||| |||||||| ||||||||| ||||||||||||||    
T  24335864 agttttagtcctaca-ccctattttcaactccaaaaacgcacataaatgacagtttta 24335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 30598038 - 30597973
Alignment:
Q  248 ttttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatat 313  Q
    |||||||||||||||| ||||| |  |  ||||||||||||||| |||||| ||| ||||||||||    
T  30598038 ttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 17504480 - 17504412
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||| || ||||||||| || || || ||||||||||||||| |||| | |||||||| ||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 23986523 - 23986595
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||||| |||||||  |||| |||||||||||| ||||||||| || ||||  |||||| |||||||| ||||    
T  23986523 ttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaa 23986595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 24336306 - 24336234
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||||||||||||| |||||  ||||||||| | ||||||||| || || | ||||||| |||||||| ||||    
T  24336306 ttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaa 24336234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 31073685 - 31073516
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||  ||| |||| ||||||       ||    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgt-gc 31073587  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31073586 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 31073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 25472556 - 25472386
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  25472556 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 25472457  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  25472456 agttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccaccta 25472386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 219 - 389
Target Start/End: Complemental strand, 5121017 - 5120848
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||||||  || |||||||||||||||||| |||||| ||| |||| ||||||        
T  5121017 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 5120918  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 389  Q
       |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5120917 tt-gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 31574268 - 31574099
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  31574268 ttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 31574170  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  31574169 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccaccta 31574099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 25468847 - 25469023
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg-nnn 317  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| |||| ||||||        
T  25468847 taggtttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 25468946  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||| |||||||||  || |||| |||||||||||||||||||||||| ||||||||||||    
T  25468947 tcttgcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccaccta 25469023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 218 - 394
Target Start/End: Original strand, 29891077 - 29891252
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||| ||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| | ||| |||| ||||||       
T  29891077 ataggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgttt 29891176  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         || ||||| |  ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  29891177 ttta-caattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 29891252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 30251240 - 30251065
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| |||||   |||||||||||||||| ||| |  ||||| || |||||||||||| |||||| |||||||| ||| ||        
T  30251240 taggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatt 30251141  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       | |||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  30251140 tttgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccaccta 30251065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 5114471 - 5114640
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| |||| |||||  |||||||| |||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       ||    
T  5114471 ttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gc 5114569  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  5114570 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccaccta 5114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 394
Target Start/End: Complemental strand, 24640729 - 24640559
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    |||||||| ||||||  ||||  |||||||| |||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||       |    
T  24640729 tttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-g 24640631  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  24640630 cagttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccaccta 24640559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 28636642 - 28636570
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28636570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 29891526 - 29891454
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  29891526 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccaccta 29891454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 31573825 - 31573897
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31573825 gcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccaccta 31573897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 247 - 366
Target Start/End: Original strand, 28636318 - 28636435
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatt 346  Q
    ||||||||||||||||||||||| || ||| |||||||||||||| |||||| | | |||| ||||||       |||||||||||||||| ||||||||    
T  28636318 attttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatgttttt--gcagttttagtcatatctccctatt 28636415  T
Q  347 tccaactccataaacgcaca 366  Q
    |||||||||||||| |||||    
T  28636416 tccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 30250808 - 30250856
Alignment:
Q  339 tccctatttccaactccataaacgcacagaaatgacagttttagtccaa 387  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  30250808 tccctatttccaactacagaaacgcacagaaatgacagttttagtccaa 30250856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 31242804 - 31242876
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaa 291  Q
    ||||||||||||||||||| | |||  ||||||||||||||||||||| ||||| | ||| ||||||||||||    
T  31242804 taggtttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaa 31242876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 32836539 - 32836467
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||| || |||| ||||||| |||||||| ||||    
T  32836539 ttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 32836467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 32836005 - 32836082
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||| |||  | || | ||||||| |||||||| ||||    
T  32836005 taggtttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaa 32836082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 12935281 - 12935318
Alignment:
Q  345 tttccaactccataaacgcacagaaatgacagttttag 382  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  12935281 tttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 30250724 - 30250769
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattg 269  Q
    ||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  30250724 ttaattacaattttggtccttgcattttgaccaactcacgaaattg 30250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 11523806 - 11523854
Alignment:
Q  343 tatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||| |||||||||||||||||| ||||  ||||| ||||||||||||    
T  11523806 tattttcaactccataaacgcacaaaaattgcagttctagtccaaccac 11523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 31073250 - 31073290
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacg 362  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  31073250 gcagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 217 - 394
Target Start/End: Original strand, 1837501 - 1837677
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnn 316  Q
    |||||| ||||||||||||||  ||||| |||||||| ||||||||||||||||||||| ||||||||||||||| |||||  ||| |||| ||||||      
T  1837501 aataggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgtt 1837600  T
Q  317 nnnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
         |||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  1837601 tttt-gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccaccta 1837677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 37421158 - 37421334
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||||||||||||||||||  || || |||||||||||| ||||||||||| || |||||||||||||||||| |||||| ||| |||| ||||||        
T  37421158 taggtttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 37421257  T
Q  319 nnn-gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  37421258 ttttgcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccaccta 37421334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 10278551 - 10278721
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  10278551 ttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 10278650  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||| |||| |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  10278651 agttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccaccta 10278721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 34555925 - 34555754
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn-g 322  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||        |    
T  34555925 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 34555826  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34555825 cagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 34555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 394
Target Start/End: Original strand, 21938562 - 21938735
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    ||||||||||||||||||  || |  |||||||| |||||||||||| ||||| || || |||||||||||| |||||| ||| |||| ||||||         
T  21938562 aggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgttttt 21938661  T
Q  320 nngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21938662 t-gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 21938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 44954769 - 44954600
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  |||||||||||||||| |||| ||||||||||| ||||||||| || |||||||||| |||| ||||||       ||    
T  44954769 ttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgtttttt-gc 44954671  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44954670 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccaccta 44954600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 30786774 - 30786941
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaa-ttgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnng 322  Q
    ||||||||||||||  | ||| ||||||||||||||||||||| ||| || |||||||||||||||||| |||||| ||| |||| ||||||       |    
T  30786774 ttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-g 30786872  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30786873 cagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccac 30786941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 444094 - 443925
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||| |||||| ||| || |||||||||||||||||||||||  ||||||||||||||||||||| |||||| | | |||| ||||||       ||    
T  444094 ttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgtttttt-gc 443996  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  443995 agttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccaccta 443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 44582060 - 44582229
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||| ||  |||||||||||       ||    
T  44582060 ttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatg-ttttttgc 44582158  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| ||  | |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  44582159 agttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccaccta 44582229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 226 - 390
Target Start/End: Original strand, 4080026 - 4080189
Alignment:
Q  226 aattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcag 325  Q
    ||||||||||||  ||||| ||| ||||||||||||||||||||||| ||||| |||||||||||| |||||| ||| |||| ||||||        |||    
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttttta-cag 4080124  T
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    |||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  4080125 ttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaacca 4080189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 218 - 394
Target Start/End: Complemental strand, 8230190 - 8230015
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    ||||||||||||||| ||||  | ||  |||||||||| | |||||||| || | ||||||||||||||||||| |||||| ||| |||| ||||||       
T  8230190 ataggtttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 8230091  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8230090 ttt-gcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 8230015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 2868251 - 2868085
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| ||||| |||||||||||||| ||||||| || || |||||||||||||||||| |||||| ||| || | ||||||       ||    
T  2868251 ttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgtttttt-gc 2868153  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  2868152 agttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccac 2868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 394
Target Start/End: Complemental strand, 17641913 - 17641738
Alignment:
Q  223 tttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat----atgnnnn 318  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||| |||| |||    ||         
T  17641913 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttatttttt 17641814  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17641813 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaccta 17641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 246 - 391
Target Start/End: Complemental strand, 52336031 - 52335887
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    |||||||||||||||| ||||||| || |||||||||||||||||| |||||| ||| |||| |||||        |||||||||||||||| |||||||    
T  52336031 cattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-tttttttgcagttttagtcatatctccctat 52335933  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52335932 ttccaactccagaaacgcacataaatgacagttttagtccaaccac 52335887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 219 - 388
Target Start/End: Original strand, 8229635 - 8229806
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| |||||||||||||| ||||| ||||||||| |||||||||||| ||||  ||| ||||||||||||||||||||| ||  |||| ||||||        
T  8229635 taggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgtttt 8229734  T
Q  319 nnn--gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaac 388  Q
         |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  8229735 tttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaac 8229806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 247 - 394
Target Start/End: Complemental strand, 37505587 - 37505442
Alignment:
Q  247 attttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctatt 346  Q
    ||||||||||||||||||||||||||||| |||||||||| | || |||||| ||| |||| ||||||       |||||||||||| ||| ||||||||    
T  37505587 attttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgttttt--gcagttttagtcctatctccctatt 37505490  T
Q  347 tccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    | |||||||| ||||||||| |||||||||||||||||||||||||||    
T  37505489 ttcaactccaaaaacgcacaaaaatgacagttttagtccaaccaccta 37505442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 44954229 - 44954395
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||| |||   ||||||||||||||||||||| || |||||||| ||||||||| || |||||| || ||||||||||||       ||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgtttttt-gc 44954327  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| || || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  44954328 agttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccac 44954395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 23340186 - 23340352
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| ||| || |||||||||||||||||||||||| || || ||||||||||||||| ||||||   | |||| |||||        ||    
T  23340186 ttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat-attttttgc 23340284  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  23340285 agttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccac 23340352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 29438933 - 29439103
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||| ||| |||| || |||       ||    
T  29438933 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttttttgc 29439032  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| || |||||| ||| || | |||| |||| |||| ||||||||||||||||||||||    
T  29439033 agttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccaccta 29439103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 246 - 388
Target Start/End: Original strand, 2867936 - 2868077
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttagtcatatatccctat 345  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||  || ||||| ||||||       |||||||||||||||| |||||||    
T  2867936 cattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatgtttttt-gcagttttagtcatatttccctat 2868034  T
Q  346 ttccaactccataaacgcacagaaatgacagttttagtccaac 388  Q
     || ||||||| ||||||||| |||||||||||||||||||||    
T  2868035 ctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 16298685 - 16298854
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||| ||||   |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||       ||    
T  16298685 ttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 16298783  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| ||| | ||||||||||||||   ||||||| | |||||| ||||||||||||||||||||    
T  16298784 agttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccaccta 16298854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 34555377 - 34555550
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||| ||||||||| ||||| |||||||| |  |||||||||||||||||| |||||| ||| |||| ||||||        
T  34555377 taggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 34555476  T
Q  319 nnng-cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
         ||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34555477 ttttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccac 34555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 10279090 - 10278927
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||||||||||| |||||  | ||||||||||||||||||| || || || || |||||||||||| |||||| |||||||| ||||||        |    
T  10279090 ttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt----c 10278995  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| ||| ||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  10278994 agttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccac 10278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 386
Target Start/End: Original strand, 37505070 - 37505232
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || |  || || |||||||||||| |||||| |||||||| ||||||       ||    
T  37505070 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 37505169  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtcca 386  Q
    |||||||||| ||| ||||||||| |||||||| ||| | |||||||||||||||||||||||    
T  37505170 agttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 9992152 - 9992327
Alignment:
Q  219 taggtttaattacactttttatccttacatttt-gaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    |||| ||||||||||||||  ||||  |||||| |||||||||||| || || || || || |||||||||||| |||||  |||||||| ||||||       
T  9992152 taggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttt 9992251  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  9992252 ttt-gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccaccta 9992327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 1744427 - 1744499
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1744427 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccaccta 1744499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 29021413 - 29021238
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnn 317  Q
    |||| |||||| |||||||  |||| |||||||||||| ||||||||| || |||| ||||||| |||||||| |||||| ||| |||||||| | |       
T  29021413 taggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggtt 29021314  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
        |||||||||||| ||   |||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||    
T  29021313 ttttgcagttttagtctta-ccccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccaccta 29021238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 394
Target Start/End: Complemental strand, 44582602 - 44582431
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  | ||  |||||||| |||||||||||| || ||||| |  ||| |||||||| |||||| || ||||| ||||||       ||    
T  44582602 ttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttgc 44582503  T
Q  324 agttttagtcatatatccctatttccaactccataaa-cgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||| | | ||||||||| || ||||| ||| ||||||||||||||||||||||||||||||||||    
T  44582502 agttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccaccta 44582431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 221 - 388
Target Start/End: Complemental strand, 50305331 - 50305162
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnn 320  Q
    |||||||||||||||||  | ||  |||||| ||||||||| |||| || || || || |||||||||||| |||||| |||||||| |||||           
T  50305331 ggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttt 50305232  T
Q  321 n--gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaac 388  Q
       |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||| ||||||    
T  50305231 tttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaac 50305162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 9992698 - 9992533
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    ||||||||||||||  ||||| ||||||||| |||||| |||| || || || || |||||||||||| |||||| | |||||| ||||||       ||    
T  9992698 ttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgtttttt-gc 9992600  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaacca 390  Q
    ||| |||||| ||| ||||||||| |||||||| ||||||  |||||||||||||||| ||||||||    
T  9992599 agtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaacca 9992533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 16299229 - 16299056
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||| ||||||| ||||  |||||||| |||||| ||||| || || ||  | |||||| | ||| |||||| |||||||| ||||||        
T  16299229 taggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgtttt 16299131  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       |||||||||||| ||| ||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  16299130 tt-gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccaccta 16299056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 394
Target Start/End: Original strand, 6224698 - 6224871
Alignment:
Q  222 gtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnn 321  Q
    ||||||||||| |||| |||||  ||||||||||||||||  ||| || |  |   | |||||||||||| |||||| ||||||||||||||            
T  6224698 gtttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatattttt 6224797  T
Q  322 g-cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
      ||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  6224798 tacagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccaccta 6224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 394
Target Start/End: Original strand, 17641467 - 17641537
Alignment:
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||  ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  17641467 agttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccaccta 17641537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 50304442 - 50304516
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatc 298  Q
    ||||||||||||||  ||||  ||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatc 50304516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 30787214 - 30787146
Alignment:
Q  326 ttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||| |||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactaccta 30787146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 50304882 - 50304954
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||||| |||||||||| |||||||||||| |||| ||||| || ||||| ||||||||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccaccta 50304954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 382
Target Start/End: Original strand, 45048152 - 45048314
Alignment:
Q  218 ataggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnn 317  Q
    |||| |||||||||||||||  ||||| |||||||||||||| |||||| || |  |||||||||||||| ||| |||||| ||| |||| ||||||       
T  45048152 atagatttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg-tt 45048250  T
Q  318 nnnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
        |||||||||||| ||  | | ||||| |||||||| ||||||| |||||| ||||||||||    
T  45048251 ttttgcagttttagtcctacct-catattttcaactccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 219 - 382
Target Start/End: Original strand, 39485063 - 39485224
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||||||||||||||||||  ||||  ||||||||| | ||||||||| || || ||||||||| |||||||| |||||| ||| |||| ||||||        
T  39485063 taggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-ttt 39485161  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
       |||||||||||| ||| | ||||||| ||||| || |||| || ||| |||||||||||||    
T  39485162 tttgcagttttagtcctatct-cctattttcaacttcagaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 30787346 - 30787251
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||| |||||||||||||| |||||  ||||| || |||||||||||| || ||||| || ||| |||||||| |||||| |||||||| ||||||    
T  30787346 taggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatg 30787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 50926233 - 50926404
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnnnnnng 322  Q
    ||||||||| ||||  ||||  ||||||||||| ||||||||| | ||||||||||||| |||||||| |||||| ||| |||| ||| ||        |    
T  50926233 ttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttg 50926332  T
Q  323 cagttttagtcatatatc-cctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||| | || | ||||||| |||||||| |||| |||| |||||  ||||||||||||||||||||    
T  50926333 cagttttagtcct-tacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccaccta 50926404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 23526665 - 23526739
Alignment:
Q  228 ttacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatcc 302  Q
    ||||||||||  |||| |||||||||||| ||||||||| || || | |||||||||||||||| ||||||||||    
T  23526665 ttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatcc 23526739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 394
Target Start/End: Complemental strand, 9833687 - 9833526
Alignment:
Q  232 actttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngcagttttag 331  Q
    |||||| ||||||  | |||||||||||||||||| |  |||| ||||||| |||||||| |||||| ||| |||| |||          ||||||||||    
T  9833687 acttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttag 9833588  T
Q  332 tcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    || ||   |||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  9833587 tcctacc-ccctattttcaactccagaaacgcacagaaataacatttttagtcctaccaccta 9833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 29439443 - 29439375
Alignment:
Q  246 cattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||| |||||||||||| ||||| || || |||||||||||| |||||| |||||||| ||||||    
T  29439443 cattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 29439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 37421491 - 37421397
Alignment:
Q  221 ggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctctttt-aaatcgaataaaatcatccttaaattatatg 314  Q
    |||||||||||||||||  || |  ||||||||||||||||||||| || || || || |||| |||||||| |||||| |||||||| ||||||    
T  37421491 ggtttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 50926669 - 50926615
Alignment:
Q  340 ccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||| ||||||||||||| |||| |||||  ||||||||||||||||||||    
T  50926669 ccctattttcaactccataaacacacataaatggtagttttagtccaaccaccta 50926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 45048683 - 45048606
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||||||||||||||||||  ||||  |||||||||||  |||||||| || ||||||||||||  ||||||| ||||    
T  45048683 taggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaa 45048606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 44802719 - 44802631
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaa 307  Q
    |||| ||||||||||||||  ||||| ||||||||||| ||||||||| || |||| ||||||| |||  ||| |||||| ||| ||||    
T  44802719 taggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaa 44802631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 23526776 - 23526815
Alignment:
Q  340 ccctatttccaactccataaacgcacagaaatgacagttt 379  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  23526776 ccctattttcaactccaaaaacgcacagaaatgacagttt 23526815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 52235218 - 52235163
Alignment:
Q  217 aataggtttaattacactttttatccttacattttgaccaactcacgaaattgatc 272  Q
    |||||| |||||||||||||| ||||| | ||||| |||||||||||||| |||||    
T  52235218 aataggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatc 52235163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 311
Target Start/End: Original strand, 29020936 - 29020970
Alignment:
Q  277 ctcttttaaatcgaataaaatcatccttaaattat 311  Q
    ||||||||||||||| |||||||||||||||||||    
T  29020936 ctcttttaaatcgaacaaaatcatccttaaattat 29020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 44291858 - 44291780
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatc 298  Q
    |||||||||| || ||||  |||||  |||||||||| |||| |||| || ||||  ||||||||||||||||||||||    
T  44291858 aggtttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatc 44291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 394
Target Start/End: Complemental strand, 29439334 - 29439305
Alignment:
Q  365 cagaaatgacagttttagtccaaccaccta 394  Q
    ||||||||||||||||||||||||||||||    
T  29439334 cagaaatgacagttttagtccaaccaccta 29439305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 23527073 - 23527001
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    ||||||| |||||| ||||| ||||||||| || |||| |||| || |||| ||| |||||||||||| ||||    
T  23527073 ttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaa 23527001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 46269 - 46439
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||| |||||||  ||||  |||||||||||||| |||||| || |  |||||||||||||||||| |||||||||| |||| ||||||       ||    
T  46269 ttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttttgc 46368  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  46369 agttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccaccta 46439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 219 - 394
Target Start/End: Complemental strand, 46816 - 46641
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnn 318  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||||| || || ||  | |||||||||||| |||||| || ||||| ||||||        
T  46816 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgtttt 46717  T
Q  319 nnngcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
       | |||||||||  |||  ||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||    
T  46716 tttgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccaccta 46641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 6943 - 6768
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    |||||||||||| |||||  ||||| |||||||||||| | ||||||||| || ||| |||||||||||||| |||||| | | |||| || |||         
T  6943 aggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgttttt 6844  T
Q  320 nngcagttttagtcata----tatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
      |||||||||||| ||    | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6843 ttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccac 6768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 6395 - 6561
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||| |||||||  ||||  |||||||| ||||||| |||| || |  || || |||||||||||| |||||| |||||||||||||||       ||    
T  6395 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt-gc 6493  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| | ||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  6494 agttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccac 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 6961 - 6786
Alignment:
Q  220 aggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnn 319  Q
    |||||||||||| |||||  ||||| |||||||||||| | ||||||||| || ||| |||||||||||||| |||||| | | |||| || |||         
T  6961 aggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgttttt 6862  T
Q  320 nngcagttttagtcata----tatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
      |||||||||||| ||    | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6861 ttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccac 6786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 6413 - 6579
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattatatgnnnnnnngc 323  Q
    |||||| |||||||  ||||  |||||||| ||||||| |||| || |  || || |||||||||||| |||||| |||||||||||||||       ||    
T  6413 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt-gc 6511  T
Q  324 agttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccac 391  Q
    |||||||||| ||| | ||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  6512 agttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccac 6579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 78417 - 78489
Alignment:
Q  322 gcagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttagtccaaccaccta 394  Q
    |||||||||||| ||| || ||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccaccta 78489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 205910 - 205754
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaatcatccttaaattat-atgnnnnnnng 322  Q
    ||||||||||||||  |||| |||||||||||||||||||||| || || | ||||||| |||||||| |||| | ||| |||| ||| |||       |    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg--tttttg 205813  T
Q  323 cagttttagtcatatatccctatttccaactccataaacgcacagaaatgacagttttag 382  Q
    ||||||||||| ||  | ||||||| |||||||| ||||||| ||||||| |||||||||    
T  205812 cagttttagtcctacgt-cctattttcaactccaaaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 210880 - 210808
Alignment:
Q  224 ttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    ||||||||||||||  |||| ||||||||||||||||| |||| || || | ||||||| |||||||| ||||    
T  210880 ttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaa 210808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 205356 - 205401
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacga 264  Q
    ||||||||||||||||||| ||||||  |||||||||| |||||||    
T  205356 taggtttaattacacttttgatccttgtattttgaccagctcacga 205401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 613 - 536
Alignment:
Q  219 taggtttaattacactttttatccttacattttgaccaactcacgaaattgatcatacctcttttaaatcgaataaaa 296  Q
    |||| |||||||||||||| |||||  ||||||||| | ||||||||| || || | ||||||| |||||||| ||||    
T  613 taggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaa 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University