View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2898_low_42 (Length: 267)
Name: NF2898_low_42
Description: NF2898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2898_low_42 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 17211076 - 17211307
Alignment:
| Q |
17 |
acatggaagagacaatgaaagtgaaagagacaacgaaagtggacgaagtggtgaaggccggagaagttggggagattgggggcgttggcgtgattgggga |
116 |
Q |
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| T |
17211076 |
acatggaagagacaatgaaagtggaagagacaacgaaagtggacgaaggggtggaggccggagaagttggggagattgggggcgttggcgtgattgggga |
17211175 |
T |
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| Q |
117 |
cctggcataggcggcctaaaaggagggcgttggggacgtaaatgaaaatcagtcgcatgcatgtatattgtatcccatgcactatgtaaagtaaaagcat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17211176 |
cctggcataggcggcctaaaaggagggcgttggggacgtaaatgaaaatcagtcgcatgcatgtatattgtatcccatgcactatgtaaagtaaaagcat |
17211275 |
T |
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| Q |
217 |
gaattctatcttacttcatgcctagtcaataa |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
17211276 |
gaattctatcttacttcatgcctagtcaataa |
17211307 |
T |
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