View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2899_low_2 (Length: 335)
Name: NF2899_low_2
Description: NF2899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2899_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 23 - 316
Target Start/End: Original strand, 9413443 - 9413736
Alignment:
| Q |
23 |
agaaccaccacctgatccttgttcagaagcaccagaacgaagatccaaactctccttagattgagtattagcactagtcatatcatgcatttgaggtgta |
122 |
Q |
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| T |
9413443 |
agaaccaccacctgatccttgttcagaagcaccagaacgaagatccaaactctccttagattgagtattagcactagtcatatcatgcatttgaggtgta |
9413542 |
T |
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| Q |
123 |
gaaccagacatagcaccatcttgccaaagatgaaccaaagaagtagttccaacaggaagagtaatacttgcataaatcgtaacctcgttattttcatgtg |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9413543 |
gaaccagacatagcaccatcttgccaaagatgaaccaaagaaggagttccaacaggaagagtaatacttgcataaatcgtaacctcgttattttcatgtg |
9413642 |
T |
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| Q |
223 |
tagcactcaaccttgaatgaggataactaatattactctctgctaattgtgtccctgaaccggcaattgatgaagtataagctttaggagttcc |
316 |
Q |
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||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
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| T |
9413643 |
tagcaatcaaccctgaatgaggataactaatattactctctgctaattgtgtccttgaattggcaattgatgaagtataagctttaggagttcc |
9413736 |
T |
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