View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2899_low_3 (Length: 318)

Name: NF2899_low_3
Description: NF2899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2899_low_3
NF2899_low_3
[»] chr2 (51 HSPs)
chr2 (142-300)||(6220613-6220772)
chr2 (14-103)||(6220508-6220597)
chr2 (14-65)||(45301763-45301814)
chr2 (14-65)||(16792481-16792532)
chr2 (14-57)||(27964474-27964517)
chr2 (14-65)||(29411694-29411745)
chr2 (14-65)||(43427391-43427442)
chr2 (14-65)||(43971502-43971553)
chr2 (14-64)||(5717512-5717562)
chr2 (14-109)||(12342047-12342142)
chr2 (14-109)||(32228115-32228209)
chr2 (14-65)||(4133022-4133073)
chr2 (14-65)||(17695929-17695980)
chr2 (14-65)||(17703017-17703068)
chr2 (14-65)||(18719536-18719587)
chr2 (14-65)||(25383588-25383639)
chr2 (14-65)||(29396784-29396835)
chr2 (14-65)||(29808810-29808861)
chr2 (22-65)||(33482341-33482384)
chr2 (18-65)||(38926604-38926651)
chr2 (15-65)||(4051809-4051859)
chr2 (15-65)||(12566085-12566135)
chr2 (15-65)||(28072565-28072615)
chr2 (14-109)||(34546435-34546529)
chr2 (15-65)||(35799201-35799251)
chr2 (15-65)||(36177974-36178024)
chr2 (16-65)||(35046516-35046565)
chr2 (14-62)||(7874748-7874795)
chr2 (14-65)||(441335-441386)
chr2 (14-65)||(4469499-4469550)
chr2 (14-65)||(8540036-8540087)
chr2 (14-65)||(13561992-13562043)
chr2 (14-65)||(14833839-14833890)
chr2 (14-65)||(16807621-16807672)
chr2 (14-65)||(16846902-16846953)
chr2 (14-65)||(18579165-18579216)
chr2 (14-65)||(22620438-22620489)
chr2 (14-65)||(36106503-36106554)
chr2 (15-62)||(42004892-42004939)
chr2 (14-60)||(7644649-7644695)
chr2 (19-65)||(8789535-8789581)
chr2 (15-65)||(10195572-10195622)
chr2 (15-65)||(12394026-12394076)
chr2 (14-56)||(45082004-45082046)
chr2 (24-65)||(37038880-37038921)
chr2 (14-63)||(45423618-45423667)
chr2 (21-65)||(9366230-9366274)
chr2 (14-58)||(16463136-16463180)
chr2 (16-48)||(35046614-35046646)
chr2 (77-109)||(40987422-40987454)
chr2 (77-109)||(45081818-45081850)
[»] chr5 (32 HSPs)
chr5 (14-109)||(39566137-39566232)
chr5 (14-65)||(3025035-3025086)
chr5 (14-62)||(27797782-27797830)
chr5 (14-65)||(4911254-4911305)
chr5 (14-65)||(7317026-7317077)
chr5 (14-65)||(10345036-10345087)
chr5 (14-65)||(24280991-24281042)
chr5 (14-65)||(24381170-24381221)
chr5 (14-65)||(42104167-42104218)
chr5 (14-109)||(2729890-2729985)
chr5 (14-108)||(14620598-14620692)
chr5 (14-62)||(3306113-3306161)
chr5 (14-65)||(39504720-39504772)
chr5 (14-65)||(21319414-21319465)
chr5 (14-65)||(26660753-26660804)
chr5 (14-65)||(26932346-26932397)
chr5 (14-65)||(38369871-38369921)
chr5 (14-109)||(7579973-7580067)
chr5 (15-64)||(15167115-15167164)
chr5 (14-62)||(36164888-36164936)
chr5 (14-65)||(6518974-6519025)
chr5 (15-62)||(40776681-40776728)
chr5 (15-62)||(42662044-42662091)
chr5 (15-65)||(43584482-43584532)
chr5 (20-65)||(31041925-31041970)
chr5 (14-62)||(4630866-4630914)
chr5 (25-65)||(15776593-15776633)
chr5 (77-109)||(31557252-31557284)
chr5 (14-58)||(35766004-35766048)
chr5 (16-64)||(38362243-38362291)
chr5 (14-58)||(39729964-39730008)
chr5 (20-64)||(42978176-42978220)
[»] chr7 (39 HSPs)
chr7 (14-65)||(13405229-13405280)
chr7 (14-65)||(33939836-33939887)
chr7 (14-109)||(22297952-22298045)
chr7 (15-65)||(34012159-34012209)
chr7 (14-65)||(24680126-24680177)
chr7 (14-65)||(42880036-42880087)
chr7 (14-65)||(45948732-45948783)
chr7 (15-65)||(27935765-27935815)
chr7 (14-109)||(39557277-39557371)
chr7 (13-58)||(18270582-18270627)
chr7 (14-62)||(10476137-10476185)
chr7 (15-63)||(40927163-40927211)
chr7 (14-65)||(715965-716016)
chr7 (14-65)||(1741989-1742040)
chr7 (14-65)||(8603973-8604024)
chr7 (14-65)||(12977788-12977839)
chr7 (14-65)||(18292333-18292384)
chr7 (14-65)||(19105103-19105154)
chr7 (14-65)||(27947603-27947654)
chr7 (14-65)||(34274792-34274843)
chr7 (14-65)||(42285906-42285957)
chr7 (17-109)||(44453089-44453181)
chr7 (14-65)||(48843550-48843601)
chr7 (16-65)||(6747225-6747274)
chr7 (14-62)||(25440873-25440921)
chr7 (14-58)||(37502324-37502368)
chr7 (14-58)||(48684728-48684772)
chr7 (14-65)||(2297036-2297087)
chr7 (14-65)||(23935420-23935471)
chr7 (14-65)||(24133232-24133283)
chr7 (14-65)||(40753530-40753581)
chr7 (14-65)||(41137726-41137777)
chr7 (14-65)||(44567143-44567194)
chr7 (14-64)||(10599212-10599262)
chr7 (15-65)||(24780409-24780459)
chr7 (23-65)||(45933695-45933737)
chr7 (77-109)||(5723195-5723227)
chr7 (14-58)||(21752213-21752257)
chr7 (14-58)||(37490789-37490833)
[»] chr1 (47 HSPs)
chr1 (14-65)||(12591184-12591235)
chr1 (14-65)||(15823032-15823083)
chr1 (15-65)||(1740744-1740794)
chr1 (14-58)||(24611622-24611666)
chr1 (14-65)||(26352183-26352234)
chr1 (14-65)||(29567894-29567945)
chr1 (14-65)||(32807040-32807091)
chr1 (14-109)||(34047337-34047433)
chr1 (14-65)||(44258609-44258660)
chr1 (14-65)||(50249308-50249359)
chr1 (14-109)||(9915397-9915492)
chr1 (15-109)||(46554754-46554846)
chr1 (14-109)||(48025356-48025451)
chr1 (14-62)||(25487089-25487137)
chr1 (17-65)||(30292938-30292986)
chr1 (14-58)||(50094234-50094278)
chr1 (14-65)||(5463573-5463624)
chr1 (14-65)||(34032182-34032233)
chr1 (14-65)||(44108597-44108648)
chr1 (14-65)||(44557146-44557197)
chr1 (15-65)||(15573605-15573655)
chr1 (14-64)||(26595171-26595221)
chr1 (15-65)||(39477810-39477860)
chr1 (14-58)||(27720963-27721007)
chr1 (14-65)||(13408367-13408418)
chr1 (15-62)||(14373516-14373563)
chr1 (14-57)||(14593422-14593465)
chr1 (18-65)||(16757300-16757347)
chr1 (15-62)||(24884416-24884463)
chr1 (14-65)||(26755218-26755269)
chr1 (14-65)||(31491872-31491923)
chr1 (14-65)||(35848035-35848086)
chr1 (14-65)||(38531399-38531450)
chr1 (22-65)||(38947653-38947696)
chr1 (14-65)||(48009008-48009059)
chr1 (14-65)||(49468813-49468864)
chr1 (15-57)||(27208995-27209037)
chr1 (15-65)||(46045971-46046021)
chr1 (14-55)||(34110535-34110576)
chr1 (77-109)||(2610994-2611026)
chr1 (14-58)||(10842785-10842829)
chr1 (77-109)||(26352002-26352034)
chr1 (77-109)||(30293534-30293566)
chr1 (14-58)||(40717398-40717442)
chr1 (15-63)||(46271420-46271468)
chr1 (77-109)||(50094181-50094213)
chr1 (77-109)||(52125046-52125078)
[»] chr3 (43 HSPs)
chr3 (14-109)||(51397964-51398059)
chr3 (14-65)||(41850388-41850439)
chr3 (14-65)||(53200781-53200832)
chr3 (14-109)||(38016330-38016424)
chr3 (14-109)||(50646211-50646306)
chr3 (14-65)||(19115385-19115436)
chr3 (14-65)||(42071983-42072034)
chr3 (14-65)||(45213823-45213874)
chr3 (14-65)||(50038272-50038323)
chr3 (14-65)||(50088417-50088468)
chr3 (15-65)||(33194133-33194183)
chr3 (15-109)||(38140906-38140998)
chr3 (15-65)||(47137961-47138011)
chr3 (14-62)||(9189536-9189584)
chr3 (14-65)||(2458005-2458056)
chr3 (14-65)||(3152907-3152958)
chr3 (14-65)||(4392194-4392245)
chr3 (14-65)||(4758989-4759040)
chr3 (14-65)||(11393543-11393594)
chr3 (14-65)||(22857088-22857139)
chr3 (14-65)||(30426425-30426476)
chr3 (14-65)||(42571630-42571681)
chr3 (14-65)||(44676219-44676270)
chr3 (14-65)||(47895445-47895496)
chr3 (14-65)||(48901718-48901769)
chr3 (14-65)||(48903284-48903335)
chr3 (14-64)||(7230997-7231047)
chr3 (17-62)||(33024404-33024449)
chr3 (14-58)||(36729911-36729955)
chr3 (14-58)||(40487833-40487877)
chr3 (14-65)||(30315307-30315358)
chr3 (14-65)||(32492282-32492333)
chr3 (14-65)||(39356883-39356934)
chr3 (14-65)||(42886749-42886800)
chr3 (14-64)||(20028338-20028388)
chr3 (14-64)||(36460805-36460855)
chr3 (14-65)||(23208392-23208441)
chr3 (77-109)||(30186328-30186360)
chr3 (14-58)||(30431125-30431169)
chr3 (21-65)||(31583542-31583586)
chr3 (15-63)||(38363785-38363833)
chr3 (28-64)||(49877155-49877191)
chr3 (17-65)||(51324143-51324191)
[»] chr6 (21 HSPs)
chr6 (14-65)||(234032-234083)
chr6 (14-65)||(18737194-18737245)
chr6 (14-65)||(21272206-21272257)
chr6 (14-65)||(24163818-24163869)
chr6 (14-109)||(32429240-32429333)
chr6 (15-64)||(13503953-13504002)
chr6 (16-109)||(9940602-9940695)
chr6 (14-65)||(4850599-4850650)
chr6 (14-65)||(29399944-29399995)
chr6 (14-65)||(32193700-32193751)
chr6 (14-58)||(19674985-19675029)
chr6 (15-62)||(12588527-12588574)
chr6 (15-57)||(12063615-12063657)
chr6 (15-65)||(31443551-31443601)
chr6 (16-65)||(23259431-23259480)
chr6 (14-58)||(8030647-8030691)
chr6 (22-58)||(12322996-12323032)
chr6 (14-62)||(24556032-24556080)
chr6 (14-58)||(29713510-29713554)
chr6 (21-65)||(31233736-31233780)
chr6 (77-109)||(34519292-34519324)
[»] scaffold0110 (1 HSPs)
scaffold0110 (14-109)||(24844-24939)
[»] chr4 (44 HSPs)
chr4 (14-109)||(45043696-45043791)
chr4 (21-65)||(33033076-33033120)
chr4 (14-65)||(4505335-4505386)
chr4 (14-65)||(10573262-10573313)
chr4 (14-65)||(19451319-19451370)
chr4 (14-65)||(19878646-19878697)
chr4 (14-65)||(25231173-25231224)
chr4 (14-65)||(52957898-52957949)
chr4 (14-65)||(54042291-54042342)
chr4 (15-65)||(29519634-29519684)
chr4 (15-65)||(49089462-49089512)
chr4 (15-100)||(27653639-27653724)
chr4 (14-58)||(39982108-39982152)
chr4 (14-109)||(50203032-50203123)
chr4 (14-65)||(1819560-1819611)
chr4 (14-65)||(37624554-37624605)
chr4 (14-65)||(40345455-40345506)
chr4 (14-65)||(44571973-44572024)
chr4 (18-65)||(52253843-52253890)
chr4 (14-65)||(52848162-52848213)
chr4 (14-65)||(52915650-52915701)
chr4 (14-60)||(21864491-21864537)
chr4 (14-60)||(21920352-21920398)
chr4 (15-102)||(34316183-34316270)
chr4 (15-65)||(40837128-40837178)
chr4 (14-58)||(2728506-2728550)
chr4 (14-62)||(29370604-29370652)
chr4 (21-65)||(30261257-30261301)
chr4 (14-65)||(19930712-19930763)
chr4 (14-65)||(20448037-20448088)
chr4 (18-65)||(40010986-40011033)
chr4 (14-65)||(41920417-41920468)
chr4 (14-65)||(50623081-50623132)
chr4 (14-65)||(51733602-51733653)
chr4 (15-58)||(53814606-53814649)
chr4 (75-109)||(53814413-53814447)
chr4 (14-64)||(56460082-56460132)
chr4 (15-64)||(45839636-45839685)
chr4 (14-62)||(6991369-6991417)
chr4 (14-58)||(7906104-7906148)
chr4 (77-109)||(37624754-37624786)
chr4 (77-109)||(38510172-38510204)
chr4 (14-58)||(50621295-50621339)
chr4 (77-109)||(54042098-54042130)
[»] chr8 (32 HSPs)
chr8 (15-109)||(43448671-43448764)
chr8 (14-58)||(43974895-43974939)
chr8 (14-102)||(9304737-9304825)
chr8 (14-65)||(15160550-15160601)
chr8 (14-65)||(17920954-17921005)
chr8 (14-65)||(39463257-39463308)
chr8 (14-65)||(39698770-39698821)
chr8 (14-65)||(40362433-40362484)
chr8 (15-65)||(9812171-9812221)
chr8 (14-64)||(40400441-40400491)
chr8 (14-62)||(43084731-43084779)
chr8 (14-65)||(4989476-4989527)
chr8 (14-65)||(6374412-6374463)
chr8 (14-65)||(29025850-29025901)
chr8 (14-65)||(31693725-31693776)
chr8 (14-65)||(37559637-37559688)
chr8 (14-65)||(39765963-39766014)
chr8 (14-65)||(40228572-40228623)
chr8 (15-65)||(44713532-44713582)
chr8 (14-65)||(396317-396369)
chr8 (21-65)||(14234329-14234373)
chr8 (14-65)||(4760662-4760713)
chr8 (14-65)||(6116109-6116160)
chr8 (14-65)||(7839456-7839507)
chr8 (14-57)||(19438242-19438285)
chr8 (14-60)||(40400080-40400126)
chr8 (15-65)||(43724379-43724429)
chr8 (20-61)||(29312303-29312344)
chr8 (14-62)||(514875-514923)
chr8 (14-58)||(5295510-5295554)
chr8 (77-109)||(8382399-8382431)
chr8 (14-58)||(35356312-35356356)
[»] scaffold0565 (1 HSPs)
scaffold0565 (14-65)||(9745-9796)
[»] scaffold0048 (1 HSPs)
scaffold0048 (14-65)||(62631-62682)
[»] scaffold2107 (1 HSPs)
scaffold2107 (14-62)||(617-665)
[»] scaffold0332 (1 HSPs)
scaffold0332 (14-65)||(3914-3965)
[»] scaffold0015 (1 HSPs)
scaffold0015 (14-109)||(21185-21280)
[»] scaffold0502 (1 HSPs)
scaffold0502 (14-62)||(675-723)
[»] scaffold0294 (1 HSPs)
scaffold0294 (14-58)||(3608-3652)
[»] scaffold0182 (1 HSPs)
scaffold0182 (14-58)||(18358-18402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (14-65)||(1517-1568)


Alignment Details
Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 6220613 - 6220772
Alignment:
Q  142 gtactccatttgatttgagtgaagtctaggtaagcacctatataaaatgtggagacttttataccttgtttat---tttcaacgatcttcaaacatttag 238  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  6220613 gtactccatttgatttgagtgaagtctaggta-gcacctatataaaatgtggagacttttataccttgtttattattttcaacgatcttcaaacatttag 6220711  T
Q  239 agtttaattgtcttggtaataccatgcatgaaatctatttaaaacaaagatcatcttaacga 300  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||    
T  6220712 agtttaattgtctt-gtaataccatgcatcaaatctatttaaaacaaagttcctcttaacga 6220772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 6220508 - 6220597
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggat 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  6220508 gaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaatttttttgagttaaaacgacactcgttttaaaacggat 6220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 45301814 - 45301763
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  45301814 gaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 45301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 16792532 - 16792481
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  16792532 gaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa 16792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 27964474 - 27964517
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattt 57  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27964474 gaaaaagttattattgcattggaaactaaaagtgacattcattt 27964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 29411745 - 29411694
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29411745 gaaaaggttattattgcattgaaaactaaaagtgacattcattttaaaacaa 29411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 43427391 - 43427442
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  43427391 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 43427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 43971553 - 43971502
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  43971553 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 43971502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 5717562 - 5717512
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  5717562 gaaaaatttattattgcattggaaactgaaagtgacattcattttaaaaca 5717512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 12342142 - 12342047
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||||         ||||||||||||||| |||| ||||||| ||||||    
T  12342142 gaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaattttttttggttaaaacgacactcattttgaaacggaaggagta 12342047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 32228115 - 32228209
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||  |||| |||||||||||||||||||||||||         | ||||||||||||| |||||||||||||||||||    
T  32228115 gaaaaagttattattgcatttaaaaccaaaagtgacattcattttaaaacaatttattt-tgctaaaacgacactcattttaaaacggatggagta 32228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4133073 - 4133022
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  4133073 gaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 4133022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 17695929 - 17695980
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||| ||||||    
T  17695929 gaaaaagttattatcacattggaaactgaaagtgacactcattttgaaacaa 17695980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 17703068 - 17703017
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  17703068 gaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 17703017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 18719536 - 18719587
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  18719536 gaaaaagttattattgcattgaaaactgaaagtgacattcatttcaaaacaa 18719587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 25383588 - 25383639
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| | ||||||||||||||||||    
T  25383588 gaaaaagttattattgcattggaaactgaaaataacattcattttaaaacaa 25383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 29396784 - 29396835
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  29396784 gaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 29396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 29808861 - 29808810
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  29808861 gaaaaagttatgattgcattgaaaactgaaagtgacattcattttaaaacaa 29808810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 33482341 - 33482384
Alignment:
Q  22 tattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  33482341 tattattacattgaaaaataaaagtgacattcattttaaaacaa 33482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 38926651 - 38926604
Alignment:
Q  18 aagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  38926651 aagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 38926604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 4051809 - 4051859
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  4051809 aaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 4051859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 12566085 - 12566135
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  12566085 aaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 12566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 28072615 - 28072565
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  28072615 aaaaagttattattgtattgaaaactgaaagtgacattcattttaaaacaa 28072565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 34546435 - 34546529
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||| ||||||       | ||||||||||||||| |||| ||||||| ||||||    
T  34546435 gaaaaaattattattgcattggaaattgaaagtgacattcattttgaaacaatttttttg-gttaaaacgacactcattttgaaacggagggagta 34546529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 35799251 - 35799201
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  35799251 aaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaa 35799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 36178024 - 36177974
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  36178024 aaaaagttattattgcattggaaacggaaagtgacattcattttgaaacaa 36177974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 35046565 - 35046516
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||| ||||||||| | |||||||||||||| |||||||||    
T  35046565 aaaagttattattgcattggaaattgaaagtgacattcatcttaaaacaa 35046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 7874748 - 7874795
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  7874748 gaaaaagttattattgcattggaaac-aaaagtgacattaattttaaaa 7874795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 441335 - 441386
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||    
T  441335 gaaaaagttattattgcattgaaaacagaaagtgacattcattttgaaacaa 441386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4469550 - 4469499
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||  |||| ||||| ||||||| ||||||||||||||||    
T  4469550 gaaaaagttattattgtattgaaaactgaaagtgaaattcattttaaaacaa 4469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 8540087 - 8540036
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| || |||||||| ||| || |||||||||||||||||    
T  8540087 gaaaaagttattattgcactggaaactgaaaatgtcattcattttaaaacaa 8540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 13562043 - 13561992
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| |||| |||||| ||||||||||| ||||| ||||||    
T  13562043 gaaaaagttattattgcattagaaactgaaagtgacatttattttgaaacaa 13561992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14833839 - 14833890
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||| || ||||| ||| | ||||||||||||||||||||||||    
T  14833839 gaaaaagttattgttgcattgaaaattgaaagtgacattcattttaaaacaa 14833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16807621 - 16807672
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  16807621 gaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaa 16807672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16846902 - 16846953
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  16846902 gaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaa 16846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 18579216 - 18579165
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  18579216 gaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaacaa 18579165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 22620438 - 22620489
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||| ||||||    
T  22620438 gaaaaagttattattgcattggaaactgaaagcgacactcattttgaaacaa 22620489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 36106503 - 36106554
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||  ||| |||||||||  |||||||||||||||||||||||||    
T  36106503 gaaaaagttagcattgcattggaaaacaaaagtgacattcattttaaaacaa 36106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 42004939 - 42004892
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  42004939 aaaaaattattattgcattggaaattaaaaatgacattcattttaaaa 42004892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 7644695 - 7644649
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaa 60  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||||    
T  7644695 gaaaaagttattattatattgaatactgaaagtgacattcattttaa 7644649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8789535 - 8789581
Alignment:
Q  19 agttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||  ||||||||||||||| || ||||||||||||||||    
T  8789535 agttattattgtattggaaactaaaagcgatattcattttaaaacaa 8789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 10195622 - 10195572
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||| ||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  10195622 aaaatgttattattgcattgaaaattaaaagtaacattcattttaaaacaa 10195572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 12394026 - 12394076
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| |||| |||||| ||||| ||||||||||| ||||||    
T  12394026 aaaaagttattattgcattagaaactgaaagtaacattcattttgaaacaa 12394076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 45082004 - 45082046
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatt 56  Q
    |||||| |||||||| ||||||||||| |||||||||||||||    
T  45082004 gaaaaaattattattgcattggaaactgaaagtgacattcatt 45082046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 37038880 - 37038921
Alignment:
Q  24 ttattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  37038880 ttattgcattgaaaactgaaagtgacattcattttaaaacaa 37038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 45423667 - 45423618
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaac 63  Q
    ||||||||||||||| ||||||||||| ||| | ||| ||||||||||||    
T  45423667 gaaaaagttattattgcattggaaactgaaaataacaatcattttaaaac 45423618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 9366230 - 9366274
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  9366230 ttattatttcattgaaaacttaaagtgacatttattttaaaacaa 9366274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 16463136 - 16463180
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||| ||||| ||||||||||| |||||    
T  16463136 gaaaaagttattattgcattgaaaactgaaagtgacatttatttt 16463180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 35046646 - 35046614
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtga 48  Q
    ||||||||||||| |||||||||||||||||||    
T  35046646 aaaagttattattgcattggaaactaaaagtga 35046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 40987422 - 40987454
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  40987422 taaaacgacactcattttaaaacggatggagta 40987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 45081850 - 45081818
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  45081850 taaaacgacactcattttaaaacggatggagta 45081818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 39566232 - 39566137
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||       | | ||||||||||||| |||||||| ||||||||||    
T  39566232 gaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaaattttttgggctaaaacgacactcattttaaaatggatggagta 39566137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 3025035 - 3025086
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  3025035 gaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 3025086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 27797830 - 27797782
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27797830 gaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 27797782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 4911254 - 4911305
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  4911254 gaaaaaggtattattacattggaaactaaaagtgacatttattttgaaacaa 4911305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 7317077 - 7317026
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  7317077 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 7317026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 10345036 - 10345087
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  10345036 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 10345087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 24281042 - 24280991
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  24281042 gaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24280991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 24381170 - 24381221
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  24381170 gaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24381221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 42104167 - 42104218
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  42104167 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 42104218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 2729890 - 2729985
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| ||||||         ||||||||||||||| |||| ||||||| ||||||    
T  2729890 gaaaaagttattattgcattggaaagtgaaagtgacattcattttgaaacaagtttttttggttaaaacgacactcattttgaaacggagggagta 2729985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 14620598 - 14620692
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagt 108  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||         | ||||||||||||| |||| |||||||||||||    
T  14620598 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaataattttttttggctaaaacgacactcattttgaaacggatggagt 14620692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 3306113 - 3306161
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  3306113 gaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 3306161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 39504772 - 39504720
Alignment:
Q  14 gaaaaagttatta-ttacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  39504772 gaaaaagttattaattgcattggaaactgaaagtgacattcattttaaaacaa 39504720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21319414 - 21319465
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||||||    
T  21319414 gaaaaagttattattgcattggaagctgaaagtgacattcattttgaaacaa 21319465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 26660804 - 26660753
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  26660804 gaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26660753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 26932397 - 26932346
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  26932397 gaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 38369921 - 38369871
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  38369921 gaaaaagttattattgcattggaaa-taaaagtgatattcattttaaaacaa 38369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 7579973 - 7580067
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||||||  |||| ||||| ||||| ||||||||||||||||||       ||  |||||||||||||||||||||||| ||| ||||    
T  7579973 gaaaaagttattattgtattgaaaactgaaagtaacattcattttaaaacaattattttga-ctaaaacgacactcgttttaaaacgaatgaagta 7580067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 15167115 - 15167164
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  15167115 aaaaagttattattgcattgaaaactgaaagtgacattcattttgaaaca 15167164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 36164936 - 36164888
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||| | ||||||||||| ||| |||||||||||||||||    
T  36164936 gaaaaagttattactgcattggaaactgaaaatgacattcattttaaaa 36164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 6519025 - 6518974
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| |||| |||||||||||| ||||||    
T  6519025 gaaaaagttattattgcattgaaaactgaaagcgacattcattttgaaacaa 6518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 40776681 - 40776728
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||||||||||| ||| | ||||||||||||| |||||||    
T  40776681 aaaaagttattattacattgaaaaatgaaagtgacattcaatttaaaa 40776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 42662044 - 42662091
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||| |||||||||||||| ||||||||| | |||||||||||||||    
T  42662044 aaaaaattattattacattgaaaactaaaaataacattcattttaaaa 42662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 43584482 - 43584532
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||| ||||| |||  |||||||||||||||||||    
T  43584482 aaaaagttattattgcattgaaaactgaaaacgacattcattttaaaacaa 43584532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 31041970 - 31041925
Alignment:
Q  20 gttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||| ||||||||||| ||||||||| ||||||||| ||||    
T  31041970 gttattattgcattggaaactgaaagtgacaatcattttaatacaa 31041925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4630914 - 4630866
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||||||  |||| ||||| ||||||||||| |||||||||    
T  4630914 gaaaaagttattattgtattgaaaactgaaagtgacatttattttaaaa 4630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 15776593 - 15776633
Alignment:
Q  25 tattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  15776593 tattgcattggaaatcaaaagtgacattcattttaaaacaa 15776633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 31557284 - 31557252
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||||||||||||||||| ||||||    
T  31557284 taaaacgacactcgttttaaaacggagggagta 31557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 35766004 - 35766048
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||||  |||| ||||| |||||||||||||||||    
T  35766004 gaaaaagttattattgtattgaaaactgaaagtgacattcatttt 35766048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 38362243 - 38362291
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||||||| ||||| ||| | ||||||||||||||||| |||||    
T  38362243 aaaagttattattgcattgaaaattgaaagtgacattcattttgaaaca 38362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 39730008 - 39729964
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| | |||||||||||    
T  39730008 gaaaaagttattattgcattggaaactgaaaataacattcatttt 39729964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 42978176 - 42978220
Alignment:
Q  20 gttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||||||    
T  42978176 gttattattgcattgaaaactgaaagtgatattcattttaaaaca 42978220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 13405229 - 13405280
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13405229 gaaaaagttattattacattggaaactgaaagtgacattcattttaaaacaa 13405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 33939836 - 33939887
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33939836 gaaaaagttattattacattggaaaccaaaagtgacattcattttaaaacaa 33939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 22298045 - 22297952
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||         | ||||||||||||| |||||||||||||||||||    
T  22298045 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttt--gctaaaacgacactcattttaaaacggatggagta 22297952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 34012209 - 34012159
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34012209 aaaaagttattagtacattggaaacttaaagtgacattcattttaaaacaa 34012159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 24680177 - 24680126
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  24680177 gaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 24680126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 42880036 - 42880087
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  42880036 gaaaaagttattattacattgaaaactgaaagtgacattcattttgaaacaa 42880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 45948732 - 45948783
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  45948732 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 45948783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 27935815 - 27935765
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  27935815 aaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 27935765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 39557371 - 39557277
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||||| ||        |||||||||||||||| |||||||||||||| ||||    
T  39557371 gaaaaaattattattacattgaaaactgaaagtgacatttattttaaaataattttttt-agttaaaacgacactcattttaaaacggatgaagta 39557277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 18270627 - 18270582
Alignment:
Q  13 tgaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  18270627 tgaaaaagttattattgcattggaaactgaaagtgacattcatttt 18270582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 10476185 - 10476137
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  10476185 gaaaaagttattattgcattggaaagtgaaagtgacattcattttaaaa 10476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 40927211 - 40927163
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaac 63  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  40927211 aaaaagttattattgcattggaaactgaaagtgacattcattttgaaac 40927163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 715965 - 716016
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  715965 gaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 716016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 1742040 - 1741989
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  1742040 gaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaa 1741989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 8604024 - 8603973
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | |||||||| |||||||||||||||    
T  8604024 gaaaaagttattattgcattggaaattgaaagtgacgttcattttaaaacaa 8603973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 12977788 - 12977839
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  12977788 gaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 12977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 18292384 - 18292333
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  18292384 gaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 18292333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 19105103 - 19105154
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  19105103 gaaaaagttattattgcattaaaaactgaaagtgacattcattttaaaacaa 19105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 27947603 - 27947654
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||    
T  27947603 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaagacaa 27947654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 34274843 - 34274792
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  34274843 gaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaa 34274792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 42285957 - 42285906
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  42285957 gaaaaaattattattgcattggaaactgaaaatgacattcattttaaaacaa 42285906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 44453181 - 44453089
Alignment:
Q  17 aaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||| ||          |||||||||||||| |||||||| ||||||||||    
T  44453181 aaagttattattgcattggaaactgaaagtgacattcatttaaaaataatattttttgattaaaacgacactcattttaaaatggatggagta 44453089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 48843601 - 48843550
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  48843601 gaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaa 48843550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 6747274 - 6747225
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| ||||||    
T  6747274 aaaagttattattgcattggaaactgaaagtgacattcgtttttaaacaa 6747225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 25440921 - 25440873
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||||||||| ||||||||||  |||||||||    
T  25440921 gaaaaagttattattgcattggaaactgaaagtgacatatattttaaaa 25440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 37502368 - 37502324
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  37502368 gaaaaagttattattgcattggaaactgaaagtgacgttcatttt 37502324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 48684772 - 48684728
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||    
T  48684772 gaaaaagttattattgcattggaaaccgaaagtgacattcatttt 48684728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 2297087 - 2297036
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  2297087 gaaaaagatattattgcattgaaaactgaaagtgacattcattttgaaacaa 2297036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 23935471 - 23935420
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| |||  |||||| ||||||||||||    
T  23935471 gaaaaagttattattgcattggaaactgaaaacgacatttattttaaaacaa 23935420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 24133232 - 24133283
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| |||||||| |||| ||||||||||    
T  24133232 gaaaaaattattattgcattggaaactgaaagtgacgttcagtttaaaacaa 24133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 40753530 - 40753581
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||||||||| ||||| ||| |||||||||||||| |||||    
T  40753530 gaaaaaattattattacattgaaaactgaaaatgacattcattttataacaa 40753581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 41137777 - 41137726
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| |||||||||||||||||| |||||||| | ||||||    
T  41137777 gaaaaaattattattgcattggaaactaaaagtggcattcattgtgaaacaa 41137726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 44567143 - 44567194
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||| ||| | ||||||||||||||||||||||||    
T  44567143 gaaaaatttattattgcattgaaaattgaaagtgacattcattttaaaacaa 44567194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 10599262 - 10599212
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||||||||| ||||| ||||| ||||||| ||||||||| |||||    
T  10599262 gaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaaca 10599212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 24780409 - 24780459
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| |||||||| |||| |||||| ||||||||||||||||| ||||||    
T  24780409 aaaaaattattattgcattagaaactgaaagtgacattcattttgaaacaa 24780459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 45933695 - 45933737
Alignment:
Q  23 attattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||    
T  45933695 attattgcattgaaaactgaaagtgacattcattttaaaacaa 45933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 5723195 - 5723227
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  5723195 taaaacgacactcattttaaaacggatggagta 5723227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 21752213 - 21752257
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| ||||||| |||||    
T  21752213 gaaaaagttattattgcattggaaactgaaaatgacatttatttt 21752257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 37490833 - 37490789
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||    
T  37490833 gaaaaaattattattgcattgaaaactgaaagtgacattcatttt 37490789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 12591184 - 12591235
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12591184 gaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaa 12591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 15823083 - 15823032
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15823083 gaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 15823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 1740744 - 1740794
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1740744 aaaaagttattatttcattggaaactgaaagtgacattcattttaaaacaa 1740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 24611622 - 24611666
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  24611622 gaaaaagttattattacattagaaactaaaagtgacattcatttt 24611666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 26352183 - 26352234
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  26352183 gaaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 26352234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 29567945 - 29567894
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  29567945 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 29567894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 32807040 - 32807091
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  32807040 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 32807091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 34047337 - 34047433
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnnga-gttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||          | ||||||||||||| |||||||||||||||||||    
T  34047337 gaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaattttttttttgctaaaacgacactcattttaaaacggatggagta 34047433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 44258609 - 44258660
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  44258609 gaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaa 44258660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 50249359 - 50249308
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  50249359 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 50249308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 9915492 - 9915397
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||||||||||||         ||||||||||||||| ||||  |||||||||||||    
T  9915492 gaaaaatttattattgcattggaaactgaaaatgacattcattttaaaacaaatttttatggttaaaacgacactcattttgtaacggatggagta 9915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 46554846 - 46554754
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||||| || |||||||| || |||||||||||||||||||||         ||||||||||||||| |||||||||||| ||||||    
T  46554846 aaaaagttattattgcagtggaaactgaaggtgacattcattttaaaacaattttttg--gttaaaacgacactcattttaaaacggagggagta 46554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 48025356 - 48025451
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||||         | ||||||||||||| |||||||||||| ||||||    
T  48025356 gaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaatttttttttgctaaaacgacactcattttaaaacggagggagta 48025451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 25487137 - 25487089
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  25487137 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 25487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 30292986 - 30292938
Alignment:
Q  17 aaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  30292986 aaagttattattgcattggaaactgaaagtggcattcattttaaaacaa 30292938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 50094278 - 50094234
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  50094278 gaaaaagttattattgcattggaaactgaaagtgacattcatttt 50094234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 5463624 - 5463573
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  5463624 gaaaaagttataattgcattggaaactgaaagtgacattcattttgaaacaa 5463573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 34032182 - 34032233
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  34032182 gaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 34032233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 44108648 - 44108597
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||  |||||||||| ||||||||||| ||||||||||||    
T  44108648 gaaaaagttattattgtattggaaactgaaagtgacatttattttaaaacaa 44108597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 44557146 - 44557197
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  44557146 gaaaatgttattattgcattggagactgaaagtgacattcattttaaaacaa 44557197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 15573655 - 15573605
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  15573655 aaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 15573605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 26595171 - 26595221
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||||||||    
T  26595171 gaaaaatttattattgcattgtaaactgaaagtgacattcattttaaaaca 26595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 39477810 - 39477860
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| |||||||| ||||||||| |||||||||||| |||||||||||||    
T  39477810 aaaaaattattattgcattggaaattaaaagtgacatccattttaaaacaa 39477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 27721007 - 27720963
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||    
T  27721007 gaaaaagttattattatattgaaaactgaaagtgacattcatttt 27720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 13408367 - 13408418
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||| | ||||||||||||||||    
T  13408367 gaaaaagttattattgcattgaaaactgaaagtaaaattcattttaaaacaa 13408418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 14373516 - 14373563
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||| || ||||||||||| ||| |||||||||||||||||    
T  14373516 aaaaagttattgttgcattggaaactgaaaatgacattcattttaaaa 14373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 14593422 - 14593465
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattt 57  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||    
T  14593422 gaaaaaattattattgcattggaaactgaaagtgacattcattt 14593465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 16757300 - 16757347
Alignment:
Q  18 aagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||||||||||| |||||||||| |||||| ||||||    
T  16757300 aagttattattgcattggaaactgaaagtgacatacattttgaaacaa 16757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 24884463 - 24884416
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||||| ||||||||| | ||||||||||| |||||||||    
T  24884463 aaaaagttattattgcattggaaattgaaagtgacatttattttaaaa 24884416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 26755269 - 26755218
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||| |  |||||||||| ||||||||||||||||| ||||||    
T  26755269 gaaaaagttattaatgtattggaaactgaaagtgacattcattttgaaacaa 26755218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 31491872 - 31491923
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||| ||||||    
T  31491872 gaaaaagttattatgacattgaaaattgaaagtgacattcattttgaaacaa 31491923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 35848035 - 35848086
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| ||| ||||||    
T  35848035 gaaaaagttattattgcattgtaaactgaaagtgacattcactttcaaacaa 35848086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 38531399 - 38531450
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  38531399 gaaaaaattattattgcattggaaactgaaaatgacattcattttgaaacaa 38531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 38947696 - 38947653
Alignment:
Q  22 tattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  38947696 tattattgcattggatactgaaagtgacattcattttaaaacaa 38947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 48009059 - 48009008
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||  ||||||||| || |||||||||||||||||    
T  48009059 gaaaaagttattattgcattaaaaactaaaaatgccattcattttaaaacaa 48009008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 49468813 - 49468864
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||    
T  49468813 gaaaatgttattattgcattggaaactgaaagttacattcattttgaaacaa 49468864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 27209037 - 27208995
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattt 57  Q
    |||||||||||||| ||||||||||  ||||||||||||||||    
T  27209037 aaaaagttattattgcattggaaaccgaaagtgacattcattt 27208995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 46046021 - 46045971
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||| | ||||| ||||||||||||||||| ||||||    
T  46046021 aaaaagttattattgcatcgaaaactgaaagtgacattcattttgaaacaa 46045971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 34110576 - 34110535
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcat 55  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
T  34110576 gaaaaagttattattgcattggaaactgaaagtaacattcat 34110535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 2610994 - 2611026
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  2610994 taaaacgacactcattttaaaacggatggagta 2611026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 10842829 - 10842785
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||||||    
T  10842829 gaaaatgttattattgcattgaaaactgaaagtgacattcatttt 10842785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 26352034 - 26352002
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  26352034 taaaacgacactcattttaaaacggatggagta 26352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 30293534 - 30293566
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||||||||| ||||||||||||||    
T  30293534 taaaacgacactcgttttgaaacggatggagta 30293566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 40717398 - 40717442
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||    
T  40717398 gaaaaaattattattgcattgaaaactgaaagtgacattcatttt 40717442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 46271420 - 46271468
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaac 63  Q
    ||||| |||||||| ||||||||||| ||| ||||||||||||| ||||    
T  46271420 aaaaaattattattccattggaaactgaaaatgacattcattttgaaac 46271468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 50094213 - 50094181
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  50094213 taaaacgacactcattttaaaacggatggagta 50094181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 52125078 - 52125046
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  52125078 taaaacgacactcattttaaaacggatggagta 52125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 51398059 - 51397964
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||         | ||||||||||||| |||||||||||||||||||    
T  51398059 gaaaaagttattattacattgaaaactaaaagtgacatttattttgaaacaattttttttggctaaaacgacactcattttaaaacggatggagta 51397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 41850439 - 41850388
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  41850439 gaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaacaa 41850388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 53200781 - 53200832
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  53200781 gaaaaagttattattgcattgaaaactaaaagtgacattcattttaaaacaa 53200832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 38016424 - 38016330
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||       | | ||||||||||||| |||| ||||||||||||||    
T  38016424 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttctttg-gctaaaacgacactcattttgaaacggatggagta 38016330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 50646211 - 50646306
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||         ||||||||||||||| |||||||||||| ||||||    
T  50646211 gaaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaatttttttttgttaaaacgacactcattttaaaacggaaggagta 50646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 19115436 - 19115385
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  19115436 gaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa 19115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 42072034 - 42071983
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  42072034 gaaaaagttattattgcattggaaactaaaaatgacatccattttaaaacaa 42071983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 45213823 - 45213874
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  45213823 gaaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 45213874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 50038272 - 50038323
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  50038272 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 50038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 50088417 - 50088468
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  50088417 gaaaaagttactattgcattggaaactaaaagtgacgttcattttaaaacaa 50088468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 33194133 - 33194183
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  33194133 aaaaagttatcattgcattggaaactgaaagtgacattcattttaaaacaa 33194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 38140998 - 38140906
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||| |||||          | |||||||||||||||||||||||||||||||||    
T  38140998 aaaaggttattattgcattggaaactgaaagtgacattcattttgaaacatttttttt--gctaaaacgacactcgttttaaaacggatggagta 38140906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 47138011 - 47137961
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  47138011 aaaaagttattattgcattgaaaactaaaaatgacattcattttaaaacaa 47137961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 9189536 - 9189584
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  9189536 gaaaaagttattatttcattgaaaactgaaagtgacattcattttaaaa 9189584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 2458056 - 2458005
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||  |||||||||| ||||||||||||||||| ||||||    
T  2458056 gaaaaagttattattgtattggaaactgaaagtgacattcattttgaaacaa 2458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 3152907 - 3152958
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  3152907 gaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 3152958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4392245 - 4392194
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||| ||||||    
T  4392245 gaaaaagttattattaaattggaaactgaaactgacattcattttgaaacaa 4392194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4759040 - 4758989
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||    
T  4759040 gaaaaagttattattgcattggaaagtgaaagtgacatttattttaaaacaa 4758989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 11393594 - 11393543
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  11393594 gaaaaagttattattgcattggaaattgaaaatgacattcattttaaaacaa 11393543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 22857139 - 22857088
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||||||||    
T  22857139 gaaaaagttattattacattgaaaatcgaaagtgacattcattttaaaacaa 22857088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 30426425 - 30426476
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  30426425 gaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 30426476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 42571630 - 42571681
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| |||||||||||  |||||||||||||||| ||||||    
T  42571630 gaaaaagttattattgcattggaaactgcaagtgacattcattttgaaacaa 42571681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 44676270 - 44676219
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  44676270 gaaaaagttatcattgcattggaaactgaaagtgacattcattttgaaacaa 44676219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 47895445 - 47895496
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  47895445 gaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 47895496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 48901769 - 48901718
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  48901769 gaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 48901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 48903335 - 48903284
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  48903335 gaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 48903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 7230997 - 7231047
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||||||||| |||| | |||||||||||||||||||||| |||||    
T  7230997 gaaaaagttattattgcattcgtaactaaaagtgacattcattttgaaaca 7231047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 33024404 - 33024449
Alignment:
Q  17 aaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  33024404 aaagttattattgcattggaaactgaaagtaacattcattttaaaa 33024449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 36729911 - 36729955
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||    
T  36729911 gaaaaagttattattgcattggaaattgaaagtgacattcatttt 36729955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 40487877 - 40487833
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||    
T  40487877 gaaaaagttattattgcattggaaatcaaaagtgacattcatttt 40487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 30315358 - 30315307
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||| || ||||||||||  ||||||||||||||||| ||||||    
T  30315358 gaaaaagttattcttgcattggaaacggaaagtgacattcattttgaaacaa 30315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 32492282 - 32492333
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||| ||||||    
T  32492282 gaaaaagttattattgcattgaaaattgaaagtgacattcattttgaaacaa 32492333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 39356934 - 39356883
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  39356934 gaaaatgttattattgcattgaaaactgaaagtgacatttattttaaaacaa 39356883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 42886800 - 42886749
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||| ||||||||||| ||||||    
T  42886800 gaaaaagttattattgcattggaaatttaaagtaacattcattttgaaacaa 42886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 20028388 - 20028338
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||||| |||||||||||| ||| ||||||||| | |||||||||||||    
T  20028388 gaaaaagtcattattacattgaaaattaaaagtgataatcattttaaaaca 20028338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 36460855 - 36460805
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||||||||| ||||| ||||| ||||||| ||||||||| |||||    
T  36460855 gaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaaca 36460805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 23208392 - 23208441
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||   ||||||||| ||||||||||||||||| ||||||    
T  23208392 gaaaaagttattattg--ttggaaactgaaagtgacattcattttgaaacaa 23208441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 30186360 - 30186328
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  30186360 taaaacgacactcattttaaaacggatggagta 30186328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 30431169 - 30431125
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||    
T  30431169 gaaaaaattattattgcattgaaaactgaaagtgacattcatttt 30431125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 31583542 - 31583586
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| || |||||||| ||||||||||| ||||||||||||    
T  31583542 ttattattgcactggaaactgaaagtgacattaattttaaaacaa 31583586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 38363833 - 38363785
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaac 63  Q
    |||| ||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  38363833 aaaaggttattattgcattgtaaactgaaagtgacattcattttgaaac 38363785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 49877191 - 49877155
Alignment:
Q  28 tacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  49877191 tacattgaaaactaaaagcgacattcattttaaaaca 49877155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 51324143 - 51324191
Alignment:
Q  17 aaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||||| | ||| ||| ||||||| ||||||||||||    
T  51324143 aaagttattattacattgaatactgaaaatgacatttattttaaaacaa 51324191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 234083 - 234032
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  234083 gaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 18737194 - 18737245
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  18737194 gaaagagttattattgcattggaaactgaaagtgacattcattttaaaacaa 18737245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21272206 - 21272257
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21272206 gaaaatgttattattacattggaaactgaaagtgatattcattttaaaacaa 21272257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 24163818 - 24163869
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  24163818 gaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaa 24163869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 32429333 - 32429240
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||| ||||||         | ||||||||||||| |||||||||||||||||||    
T  32429333 gaaaaagttattattgcattggaaattaaaagtgacattcgttttgaaacaattttttg--gctaaaacgacactcattttaaaacggatggagta 32429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 13503953 - 13504002
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  13503953 aaaaagttattattgcattggaaactgaaagtgacattcattttgaaaca 13504002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 9940695 - 9940602
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| ||||| ||||| ||||||||| ||||||||||||||         |||||| |||||||| |||| ||||||||||||||    
T  9940695 aaaagttattattgcattgaaaactgaaagtgacaatcattttaaaacaatttttttttgttaaagcgacactcattttgaaacggatggagta 9940602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 4850599 - 4850650
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  4850599 gaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 4850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 29399995 - 29399944
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  29399995 gaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 29399944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 32193751 - 32193700
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| |||| |||||||||||||||||| ||||||||||||    
T  32193751 gaaaaaattattattgcattagaaactaaaagtgacatttattttaaaacaa 32193700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 19675029 - 19674985
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  19675029 gaaaaagttattattgcattggaaactgaaaatgacattcatttt 19674985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 12588574 - 12588527
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  12588574 aaaaagttattattgcattgcaaactgaaagtaacattcattttaaaa 12588527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 12063615 - 12063657
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattt 57  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||    
T  12063615 aaaaaattattattgcattggaaactgaaagtgacattcattt 12063657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 31443551 - 31443601
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  31443551 aaaaagttattattgcattggaaactgaaaataacattcatttttaaacaa 31443601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 23259431 - 23259480
Alignment:
Q  16 aaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||| || ||||||||||| ||| ||||||||||||| ||||||    
T  23259431 aaaagttatttttgcattggaaactgaaaatgacattcattttgaaacaa 23259480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 8030691 - 8030647
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||||    
T  8030691 gaaaaaattattattacattgaaaactgaaagtaacattcatttt 8030647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 12322996 - 12323032
Alignment:
Q  22 tattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  12322996 tattattgcattggaaactgaaagtgacattcatttt 12323032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 24556032 - 24556080
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||| |||||||||||||| ||||| ||| ||||||| |||||||||    
T  24556032 gaaaaaattattattacattgaaaactgaaaatgacatttattttaaaa 24556080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 29713510 - 29713554
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||  ||| |||||||||||||    
T  29713510 gaaaaagttattattgcattggaaacggaaaatgacattcatttt 29713554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 31233736 - 31233780
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| || || ||||| ||||||||||||||||||||||||    
T  31233736 ttattattgcaatgaaaactgaaagtgacattcattttaaaacaa 31233780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 34519292 - 34519324
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  34519292 taaaacgacactcattttaaaacggatggagta 34519324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 24844 - 24939
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||         | ||||||||||||| |||| ||||||||||||||    
T  24844 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggataaaacgacactcattttgaaacggatggagta 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 45043696 - 45043791
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||||||||||||        |  ||||||||||||| |||||||||||||||||||    
T  45043696 gaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaattttttttaaataaaacgacactcattttaaaacggatggagta 45043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 33033120 - 33033076
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  33033120 ttattattgcattggaaactaaaagtgacattcattttaaaacaa 33033076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4505386 - 4505335
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  4505386 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 4505335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 10573262 - 10573313
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  10573262 gaaaaagttattattgcattggaaactaaaaatgacattcattttgaaacaa 10573313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 19451319 - 19451370
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  19451319 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 19451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 19878697 - 19878646
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  19878697 gaaaaagttattattgcattggaaactgaaagtgacattcattttcaaacaa 19878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 25231224 - 25231173
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  25231224 gaaaaagttattattgcattggaaattgaaagtgacattcattttaaaacaa 25231173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 52957898 - 52957949
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  52957898 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52957949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 54042291 - 54042342
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  54042291 gaaaaaattattattacattggaaaccgaaagtgacattcattttaaaacaa 54042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 29519634 - 29519684
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  29519634 aaaaagttattattgcattggaaactaaaagtgacatttattttgaaacaa 29519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 49089512 - 49089462
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  49089512 aaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 49089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 27653724 - 27653639
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacg 100  Q
    |||||||||| ||| |||| |||||||||| ||||||| ||||||||||||        |||||||||||||||| ||||||||||    
T  27653724 aaaaagttatcattgcattagaaactaaaaatgacatttattttaaaacaatttattttagttaaaacgacactcattttaaaacg 27653639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 39982152 - 39982108
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  39982152 gaaaaagttattattgcattggaaactgaaagtgacattcatttt 39982108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 50203123 - 50203032
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| |||||||  || ||||||||||||||||||||||||         | ||||||||||||| |||||||||||||||||||    
T  50203123 gaaaaagttattattgcattgga--ctgaaagtgacattcattttaaaacaattttttt--gctaaaacgacactcattttaaaacggatggagta 50203032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 1819611 - 1819560
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  1819611 gaaaaatttattattgcattggaaactgaaagtgacattcattttgaaacaa 1819560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 37624605 - 37624554
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  37624605 gaaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaa 37624554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 40345455 - 40345506
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  40345455 gaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 40345506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 44571973 - 44572024
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  44571973 gaaaaagtttttattgcattggaaactgaaagcgacattcattttaaaacaa 44572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 52253890 - 52253843
Alignment:
Q  18 aagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  52253890 aagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 52848162 - 52848213
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||||    
T  52848162 gaaaaaattattattgcattggaaattgaaagtgacattcattttaaaacaa 52848213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 52915650 - 52915701
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||| ||||||    
T  52915650 gaaaaagttattattgcattggaaactgaaagcgacattcattttgaaacaa 52915701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 21864491 - 21864537
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaa 60  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  21864491 gaaaaagttattattgcattggaaactgaaagtaacattcattttaa 21864537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 21920352 - 21920398
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaa 60  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  21920352 gaaaaagttattattgcattggaaactgaaagtaacattcattttaa 21920398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 34316270 - 34316183
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacgga 102  Q
    ||||| |||||||| ||||||||||| ||||||||||| ||||||||| ||        | |||||||||||||| ||||||||||||    
T  34316270 aaaaaattattattgcattggaaactgaaagtgacatttattttaaaataattttgtttaattaaaacgacactcattttaaaacgga 34316183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 40837178 - 40837128
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  40837178 aaaaagttattattgcattggaaaatgaaagtgacattcattttgaaacaa 40837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 2728506 - 2728550
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  2728506 gaaaaagttattattgcattggaaactgaaaatgacattcatttt 2728550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 29370652 - 29370604
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||||||||||||| |||| ||||| ||||||||||| |||||||||    
T  29370652 gaaaaagttattattatattgaaaactgaaagtgacatttattttaaaa 29370604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 30261301 - 30261257
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  30261301 ttattattgcattggaaactgaaagtgacattcattttgaaacaa 30261257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 19930763 - 19930712
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||||| ||||||    
T  19930763 gaaaaagttattattgcatcggaaattgaaagtgacattcattttgaaacaa 19930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 20448088 - 20448037
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  20448088 gaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaacaa 20448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 40010986 - 40011033
Alignment:
Q  18 aagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||||||||    
T  40010986 aagttgttattgcattggaaactgaaagtaacattcattttaaaacaa 40011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 41920417 - 41920468
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| | ||||||||| ||| ||||||| ||||||||||||    
T  41920417 gaaaaagttattattgctttggaaactgaaaatgacatttattttaaaacaa 41920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 50623132 - 50623081
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||||||| | |||| |||||||||||||    
T  50623132 gaaaaagttattattgcattgaaaactaaaaataacatacattttaaaacaa 50623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 51733602 - 51733653
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| |||||||| |||| |||||| ||||||||||||||||| ||||||    
T  51733602 gaaaaaattattattgcattagaaactgaaagtgacattcattttgaaacaa 51733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 53814606 - 53814649
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  53814606 aaaaagttattattgcattgttaactaaaagtgacattcatttt 53814649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 53814447 - 53814413
Alignment:
Q  75 gttaaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  53814447 gttaaaacgacactcattttaaaacggatggagta 53814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 56460132 - 56460082
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||||||| |||| ||||| || || |||||||||||||||||||||||    
T  56460132 gaaaaagttactattgcattgaaagctgaaagtgacattcattttaaaaca 56460082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 45839685 - 45839636
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    ||||||||||||||  ||| |||||| |||||||||||||||| ||||||    
T  45839685 aaaaagttattattgtattagaaactgaaagtgacattcatttcaaaaca 45839636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 6991369 - 6991417
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||| ||||||||  |||| ||||| |||||||||||||||||||||    
T  6991369 gaaaaaattattattgtattgaaaactgaaagtgacattcattttaaaa 6991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 7906104 - 7906148
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  7906104 gaaaaagttattattgcaccggaaactgaaagtgacattcatttt 7906148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 37624754 - 37624786
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  37624754 taaaacgacactcattttaaaacggatggagta 37624786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 38510204 - 38510172
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  38510204 taaaacgacactcattttaaaacggatggagta 38510172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 50621295 - 50621339
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||| ||||| ||||||||||| |||||    
T  50621295 gaaaaagttattattgcattgaaaacttaaagtgacatttatttt 50621339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 54042130 - 54042098
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  54042130 taaaacgacactcattttaaaacggatggagta 54042098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 43448764 - 43448671
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||| ||||||       || ||||||||| |||| |||||||||||||||||||    
T  43448764 aaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaatttttttga-ttaaaacgatactcattttaaaacggatggagta 43448671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 43974895 - 43974939
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  43974895 gaaaaagttattattgcattggaaactaaaagtgacattcatttt 43974939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 9304737 - 9304825
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacgga 102  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| ||||||        | |||||||||||||| ||||||||||||    
T  9304737 gaaaaaattattattgcattggaaactaaaagtcacattcattttgaaacaattttttttaattaaaacgacactcattttaaaacgga 9304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 15160550 - 15160601
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  15160550 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 15160601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 17921005 - 17920954
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  17921005 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 17920954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 39463308 - 39463257
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  39463308 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 39463257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 39698770 - 39698821
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  39698770 gaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 39698821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40362484 - 40362433
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  40362484 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 40362433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 9812221 - 9812171
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  9812221 aaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 9812171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 40400491 - 40400441
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaaca 64  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  40400491 gaaaaaattattattatattagaaactaaaagtgacattcattttaaaaca 40400441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 43084731 - 43084779
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  43084731 gaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 43084779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4989527 - 4989476
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  4989527 gaaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaa 4989476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 6374463 - 6374412
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  6374463 gaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 6374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 29025850 - 29025901
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||| ||||||    
T  29025850 gaaaaagttattattgcattggaaacttaaagtgacattcgttttgaaacaa 29025901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 31693725 - 31693776
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  31693725 gaaaaagttattattgcattgaaaactgaaagtgatattcattttaaaacaa 31693776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 37559637 - 37559688
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||||  |||||||||| ||||||||||| ||||||||||||    
T  37559637 gaaaaagttattattgtattggaaactgaaagtgacattgattttaaaacaa 37559688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 39765963 - 39766014
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  39765963 gaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 39766014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40228623 - 40228572
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  40228623 gaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 40228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 44713582 - 44713532
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  44713582 aaaaagttattattgcattggaaaatgaaagtgatattcattttaaaacaa 44713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 396317 - 396369
Alignment:
Q  14 gaaaaagttattattacattggaaact-aaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||||||    
T  396317 gaaaaagttattattgcatttcaaactgaaaagtgacattcattttaaaacaa 396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 14234329 - 14234373
Alignment:
Q  21 ttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||    
T  14234329 ttattattgcattagaaattaaaagtgacattcattttaaaacaa 14234373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 4760662 - 4760713
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    |||||| ||||| || ||||||||| | ||||||||||||||||||||||||    
T  4760662 gaaaaaattattgttgcattggaaaatgaaagtgacattcattttaaaacaa 4760713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 6116109 - 6116160
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||    
T  6116109 gaaaaagttattattgcattgaaaaccgaaagtgatattcattttaaaacaa 6116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 7839507 - 7839456
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  7839507 gaaaaggttattattgcattggaaattgaaagtgacattcattttgaaacaa 7839456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 19438285 - 19438242
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattt 57  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||    
T  19438285 gaaaaagttattattacattggaaactgagagtgacatttattt 19438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 40400080 - 40400126
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaa 60  Q
    |||||| ||||| || ||||||||||||||||| |||||||||||||    
T  40400080 gaaaaaattattgttgcattggaaactaaaagtcacattcattttaa 40400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 43724429 - 43724379
Alignment:
Q  15 aaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  43724429 aaaaaattattattgcattggaaactgaaagtgaaattcattttgaaacaa 43724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 29312303 - 29312344
Alignment:
Q  20 gttattattacattggaaactaaaagtgacattcattttaaa 61  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||    
T  29312303 gttattattgcattggaaactgaaaatgacattcattttaaa 29312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 514923 - 514875
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||| |||||||| ||||| ||| | |||||||||||||||||||||    
T  514923 gaaaaaattattattgcattgaaaattgaaagtgacattcattttaaaa 514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 5295510 - 5295554
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||| |||||||| |||| |||||| |||||||||||||||||    
T  5295510 gaaaaaattattattgcattagaaacttaaagtgacattcatttt 5295554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 8382431 - 8382399
Alignment:
Q  77 taaaacgacactcgttttaaaacggatggagta 109  Q
    ||||||||||||| |||||||||||||||||||    
T  8382431 taaaacgacactcattttaaaacggatggagta 8382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 35356356 - 35356312
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| ||| |||||||||    
T  35356356 gaaaaagttattattgcattggaaactgaaaatgatattcatttt 35356312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 9745 - 9796
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  9745 gaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 9796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 62682 - 62631
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  62682 gaaaaagttattattacataggaaactgaaagtgacattcattttgaaacaa 62631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 617 - 665
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  617 gaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 3914 - 3965
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  3914 gaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 3965  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 21185 - 21280
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaannnnnnngagttaaaacgacactcgttttaaaacggatggagta 109  Q
    |||||| |||||||| |||| |||||| ||||||||| ||||||||||| ||          |||||||||||||| |||||||||||||||||||    
T  21185 gaaaaaattattattgcatttgaaactgaaagtgacagtcattttaaaataatttttttttattaaaacgacactcattttaaaacggatggagta 21280  T

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Target: scaffold0502 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 675 - 723
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaa 62  Q
    ||||||||||||||| ||||||||| |  ||||||||||||||||||||    
T  675 gaaaaagttattattgcattggaaattgtaagtgacattcattttaaaa 723  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 3608 - 3652
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    |||||||||||||||  |||||||||| |||||||||||||||||    
T  3608 gaaaaagttattattgtattggaaactgaaagtgacattcatttt 3652  T

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Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 18358 - 18402
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcatttt 58  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  18358 gaaaaagttattattgcattggaaactgaaaatgacattcatttt 18402  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 1517 - 1568
Alignment:
Q  14 gaaaaagttattattacattggaaactaaaagtgacattcattttaaaacaa 65  Q
    ||||||||||| ||| |||| |||||| ||||||||||||||||| ||||||    
T  1517 gaaaaagttatcattgcattagaaactgaaagtgacattcattttgaaacaa 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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