View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2901_high_7 (Length: 240)
Name: NF2901_high_7
Description: NF2901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2901_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 47609632 - 47609856
Alignment:
| Q |
1 |
caaaactcatttgaaataaaatatcaagtttcaattcgtgaaaggcattcgtgcatttaagtttcaatttgatgagctttagtatacaaaagatcatgtt |
100 |
Q |
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| T |
47609632 |
caaaactcatttgaaataaaatatcaagtttcaattcgtgaaaggcattcgtgcatttaagtttcaatttgatgagctttagtatacaaaagatcatgtt |
47609731 |
T |
|
| Q |
101 |
taagtttctcacaatatctcagannnnnnnnnnnnnnnnnnnnnnaacaaaggaaaattgtatctacggtattcttgaatgggaggcaaaactcgtttga |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
47609732 |
taagtttctcacaatatctcagatttttttattttttatttttttaacaaaggaaaattgtatcaaaggtattcttgaatgggaggcaaaactcgtttga |
47609831 |
T |
|
| Q |
201 |
tataaaagaagaaaacaaaatacat |
225 |
Q |
| |
|
||||||||||||||||||| ||||| |
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| T |
47609832 |
tataaaagaagaaaacaaagtacat |
47609856 |
T |
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